data_SMR-aa4c40c7d93c44b3c2b80056c24f5dc2_4
_entry.id SMR-aa4c40c7d93c44b3c2b80056c24f5dc2_4
_struct.entry_id SMR-aa4c40c7d93c44b3c2b80056c24f5dc2_4
_struct.pdbx_model_details
;This model was generated unsupervised by the SWISS-MODEL homology-modelling pipeline for the SWISS-MODEL Repository, a database of annotated 3D protein structure models. The modelled monomer covers following UniProtKB entries:

  - A0A075TDH1/ A0A075TDH1_MUSCR, Prion-like protein
  - Q544A3/ Q544A3_MOUSE, Prion-like protein
  - Q9QUG3/ PRND_MOUSE, Prion-like protein doppel

Estimated model accuracy of this model is 0.032, calculated by SWISS-MODEL as Global Model Quality Estimate (GMQE).
;
_struct.pdbx_structure_determination_methodology computational
_struct.title 'Model for UniProtKB entries A0A075TDH1, Q544A3, Q9QUG3'
_audit_conform.dict_location https://raw.githubusercontent.com/ihmwg/ModelCIF/d18ba38/base/mmcif_ma-core.dic
_audit_conform.dict_name mmcif_ma.dic
_audit_conform.dict_version 1.4.6
#
loop_
_citation.id
_citation.title
_citation.journal_abbrev
_citation.journal_volume
_citation.page_first
_citation.page_last
_citation.year
_citation.pdbx_database_id_PubMed
_citation.pdbx_database_id_DOI
primary 'The SWISS-MODEL Repository - new features and functionality'
'Nucleic Acids Res.' 45 D313 D319 2017 27899672 10.1093/nar/gkw1132
2 'SWISS-MODEL: homology modelling of protein structures and complexes'
'Nucleic Acids Res.' 46 W296 W303 2018 29788355 10.1093/nar/gky427
3 'ProMod3 - A versatile homology modelling toolbox' 'PLoS Comput. Biol.' 17(1)
1 18 2021 33507980 10.1371/journal.pcbi.1008667
4 'QMEANDisCo - distance constraints applied on model quality estimation'
Bioinformatics 36 1765 1771 2020 31697312 10.1093/bioinformatics/btz828
5
'OpenStructure: an integrated software framework for computational structural biology'
'Acta Crystallogr., Sect. D: Biol. Crystallogr.' 69 701 709 2013 23633579
10.1107/S0907444913007051
6 'BLAST+: architecture and applications' 'BMC Bioinf.' 10 421 . 2009 20003500
10.1186/1471-2105-10-421
7 'HH-suite3 for fast remote homology detection and deep protein annotation'
'BMC Bioinf.' 20 473 . 2019 31521110 10.1186/s12859-019-3019-7
#
#
loop_
_citation_author.citation_id
_citation_author.name
_citation_author.ordinal
primary 'Bienert, S.' 1
primary 'Waterhouse, A.' 2
primary 'de Beer, T.A.P.' 3
primary 'Tauriello, G.' 4
primary 'Studer, G.' 5
primary 'Bordoli, L.' 6
primary 'Schwede, T.' 7
2 'Waterhouse, A.' 8
2 'Bertoni, M.' 9
2 'Bienert, S.' 10
2 'Studer, G.' 11
2 'Tauriello, G.' 12
2 'Gumienny, R.' 13
2 'Heer, F.T.' 14
2 'de Beer, T.A.P.' 15
2 'Rempfer, C.' 16
2 'Bordoli, L.' 17
2 'Lepore, R.' 18
2 'Schwede, T.' 19
3 'Studer, G.' 20
3 'Tauriello, G.' 21
3 'Bienert, S.' 22
3 'Biasini, M.' 23
3 'Johner, N.' 24
3 'Schwede, T.' 25
4 'Studer, G.' 26
4 'Rempfer, C.' 27
4 'Waterhouse, A.M.' 28
4 'Gumienny, R.' 29
4 'Haas, J.' 30
4 'Schwede, T.' 31
5 'Biasini, M.' 32
5 'Schmidt, T.' 33
5 'Bienert, S.' 34
5 'Mariani, V.' 35
5 'Studer, G.' 36
5 'Haas, J.' 37
5 'Johner, N.' 38
5 'Schenk, A.D.' 39
5 'Philippsen, A.' 40
5 'Schwede, T.' 41
6 'Camacho, C.' 42
6 'Coulouris, G.' 43
6 'Avagyan, V.' 44
6 'Ma, N.' 45
6 'Papadopoulos, J.' 46
6 'Bealer, K.' 47
6 'Madden, T.L.' 48
7 'Steinegger, M.' 49
7 'Meier, M.' 50
7 'Mirdita, M.' 51
7 'Vohringer, H.' 52
7 'Haunsberger, S.J.' 53
7 'Soding, J.' 54
#
#
loop_
_software.pdbx_ordinal
_software.name
_software.classification
_software.description
_software.version
_software.type
_software.location
_software.citation_id
1 SWISS-MODEL 'model building' 'Homology modelling web service' 2024-10.3
package https://swissmodel.expasy.org 2
2 ProMod3 'model building' 'Modular homology modelling engine' 3.4.1 library
https://git.scicore.unibas.ch/schwede/ProMod3 3
3 QMEAN 'model building' 'QMEAN - Qualitative Model Energy ANalysis' 4.3.1
library https://git.scicore.unibas.ch/schwede/QMEAN 4
4 OpenStructure 'data processing'
'Open-Source Computational Structural Biology Framework' 2.8.0 package
https://openstructure.org/ 5
5 BLAST 'data collection' . 2.2.31 package https://blast.ncbi.nlm.nih.gov 6
6 HH-suite 'data collection' 'HH-suite3 for sensitive sequence searching' 3.2.0
package https://github.com/soedinglab/hh-suite 7
#
#
loop_
_ma_software_group.ordinal_id
_ma_software_group.group_id
_ma_software_group.software_id
_ma_software_group.parameter_group_id
1 1 6 .
2 2 1 .
3 2 4 .
4 2 5 .
5 2 6 .
6 3 1 .
7 3 4 .
8 4 1 .
9 4 2 .
10 4 4 .
11 5 3 .
12 6 1 .
13 6 3 .
14 6 4 .
#
#
loop_
_audit_author.name
_audit_author.pdbx_ordinal
'Bienert, S.' 1
'Waterhouse, A.' 2
'de Beer, T.A.P.' 3
'Tauriello, G.' 4
'Studer, G.' 5
'Bordoli, L.' 6
'Schwede, T.' 7
#
#
loop_
_chem_comp.id
_chem_comp.type
_chem_comp.name
_chem_comp.formula
_chem_comp.formula_weight
_chem_comp.ma_provenance
ALA 'L-peptide linking' ALANINE 'C3 H7 N O2' 89.094 'CCD Core'
ARG 'L-peptide linking' ARGININE 'C6 H15 N4 O2 1' 175.212 'CCD Core'
ASN 'L-peptide linking' ASPARAGINE 'C4 H8 N2 O3' 132.119 'CCD Core'
ASP 'L-peptide linking' 'ASPARTIC ACID' 'C4 H7 N O4' 133.103 'CCD Core'
CYS 'L-peptide linking' CYSTEINE 'C3 H7 N O2 S' 121.154 'CCD Core'
GLN 'L-peptide linking' GLUTAMINE 'C5 H10 N2 O3' 146.146 'CCD Core'
GLU 'L-peptide linking' 'GLUTAMIC ACID' 'C5 H9 N O4' 147.130 'CCD Core'
GLY 'peptide linking' GLYCINE 'C2 H5 N O2' 75.067 'CCD Core'
HIS 'L-peptide linking' HISTIDINE 'C6 H10 N3 O2 1' 156.165 'CCD Core'
ILE 'L-peptide linking' ISOLEUCINE 'C6 H13 N O2' 131.175 'CCD Core'
LEU 'L-peptide linking' LEUCINE 'C6 H13 N O2' 131.175 'CCD Core'
LYS 'L-peptide linking' LYSINE 'C6 H15 N2 O2 1' 147.198 'CCD Core'
MET 'L-peptide linking' METHIONINE 'C5 H11 N O2 S' 149.208 'CCD Core'
PHE 'L-peptide linking' PHENYLALANINE 'C9 H11 N O2' 165.192 'CCD Core'
PRO 'L-peptide linking' PROLINE 'C5 H9 N O2' 115.132 'CCD Core'
SER 'L-peptide linking' SERINE 'C3 H7 N O3' 105.093 'CCD Core'
THR 'L-peptide linking' THREONINE 'C4 H9 N O3' 119.120 'CCD Core'
TRP 'L-peptide linking' TRYPTOPHAN 'C11 H12 N2 O2' 204.229 'CCD Core'
TYR 'L-peptide linking' TYROSINE 'C9 H11 N O3' 181.191 'CCD Core'
VAL 'L-peptide linking' VALINE 'C5 H11 N O2' 117.148 'CCD Core'
#
#
loop_
_entity.id
_entity.type
_entity.src_method
_entity.pdbx_description
_entity.formula_weight
_entity.pdbx_number_of_molecules
_entity.details
1 polymer man . 23678.677 1 .
#
#
loop_
_struct_ref.id
_struct_ref.entity_id
_struct_ref.db_name
_struct_ref.db_code
_struct_ref.pdbx_db_accession
_struct_ref.pdbx_align_begin
_struct_ref.pdbx_seq_one_letter_code
_struct_ref.details
1 1 UNP PRND_MOUSE Q9QUG3 1
;MKNRLGTWWVAILCMLLASHLSTVKARGIKHRFKWNRKVLPSSGGQITEARVAENRPGAFIKQGRKLDID
FGAEGNRYYAANYWQFPDGIYYEGCSEANVTKEMLVTSCVNATQAANQAEFSREKQDSKLHQRVLWRLIK
EICSAKHCDFWLERGAALRVAVDQPAMVCLLGFVWFIVK
;
'Prion-like protein doppel'
2 1 UNP A0A075TDH1_MUSCR A0A075TDH1 1
;MKNRLGTWWVAILCMLLASHLSTVKARGIKHRFKWNRKVLPSSGGQITEARVAENRPGAFIKQGRKLDID
FGAEGNRYYAANYWQFPDGIYYEGCSEANVTKEMLVTSCVNATQAANQAEFSREKQDSKLHQRVLWRLIK
EICSAKHCDFWLERGAALRVAVDQPAMVCLLGFVWFIVK
;
'Prion-like protein'
3 1 UNP Q544A3_MOUSE Q544A3 1
;MKNRLGTWWVAILCMLLASHLSTVKARGIKHRFKWNRKVLPSSGGQITEARVAENRPGAFIKQGRKLDID
FGAEGNRYYAANYWQFPDGIYYEGCSEANVTKEMLVTSCVNATQAANQAEFSREKQDSKLHQRVLWRLIK
EICSAKHCDFWLERGAALRVAVDQPAMVCLLGFVWFIVK
;
'Prion-like protein'
#
#
loop_
_struct_ref_seq.align_id
_struct_ref_seq.ref_id
_struct_ref_seq.seq_align_beg
_struct_ref_seq.seq_align_end
_struct_ref_seq.db_align_beg
_struct_ref_seq.db_align_end
1 1 1 179 1 179
2 2 1 179 1 179
3 3 1 179 1 179
#
#
loop_
_ma_target_ref_db_details.target_entity_id
_ma_target_ref_db_details.db_name
_ma_target_ref_db_details.db_name_other_details
_ma_target_ref_db_details.db_code
_ma_target_ref_db_details.db_accession
_ma_target_ref_db_details.seq_db_isoform
_ma_target_ref_db_details.seq_db_align_begin
_ma_target_ref_db_details.seq_db_align_end
_ma_target_ref_db_details.ncbi_taxonomy_id
_ma_target_ref_db_details.organism_scientific
_ma_target_ref_db_details.seq_db_sequence_version_date
_ma_target_ref_db_details.seq_db_sequence_checksum
1 UNP . PRND_MOUSE Q9QUG3 . 1 179 10090 'Mus musculus (Mouse)' 2000-05-01
FC8B788259EE40F2
1 UNP . A0A075TDH1_MUSCR A0A075TDH1 . 1 179 10089
'Mus caroli (Ryukyu mouse) (Ricefield mouse)' 2014-10-29 FC8B788259EE40F2
1 UNP . Q544A3_MOUSE Q544A3 . 1 179 10090 'Mus musculus (Mouse)' 2005-05-24
FC8B788259EE40F2
#
#
loop_
_entity_poly.entity_id
_entity_poly.type
_entity_poly.nstd_linkage
_entity_poly.nstd_monomer
_entity_poly.pdbx_strand_id
_entity_poly.pdbx_seq_one_letter_code
_entity_poly.pdbx_seq_one_letter_code_can
1 polypeptide(L) no no A
;MKNRLGTWWVAILCMLLASHLSTVKARGIKHRFKWNRKVLPSSGGQITEARVAENRPGAFIKQGRKLDID
FGAEGNRYYAANYWQFPDGIYYEGCSEANVTKEMLVTSCVNATQAANQAEFSREKQDSKLHQRVLWRLIK
EICSAKHCDFWLERGAALRVAVDQPAMVCLLGFVWFIVK
;

;MKNRLGTWWVAILCMLLASHLSTVKARGIKHRFKWNRKVLPSSGGQITEARVAENRPGAFIKQGRKLDID
FGAEGNRYYAANYWQFPDGIYYEGCSEANVTKEMLVTSCVNATQAANQAEFSREKQDSKLHQRVLWRLIK
EICSAKHCDFWLERGAALRVAVDQPAMVCLLGFVWFIVK
;

#
#
loop_
_entity_poly_seq.entity_id
_entity_poly_seq.num
_entity_poly_seq.mon_id
_entity_poly_seq.hetero
1 1 MET .
1 2 LYS .
1 3 ASN .
1 4 ARG .
1 5 LEU .
1 6 GLY .
1 7 THR .
1 8 TRP .
1 9 TRP .
1 10 VAL .
1 11 ALA .
1 12 ILE .
1 13 LEU .
1 14 CYS .
1 15 MET .
1 16 LEU .
1 17 LEU .
1 18 ALA .
1 19 SER .
1 20 HIS .
1 21 LEU .
1 22 SER .
1 23 THR .
1 24 VAL .
1 25 LYS .
1 26 ALA .
1 27 ARG .
1 28 GLY .
1 29 ILE .
1 30 LYS .
1 31 HIS .
1 32 ARG .
1 33 PHE .
1 34 LYS .
1 35 TRP .
1 36 ASN .
1 37 ARG .
1 38 LYS .
1 39 VAL .
1 40 LEU .
1 41 PRO .
1 42 SER .
1 43 SER .
1 44 GLY .
1 45 GLY .
1 46 GLN .
1 47 ILE .
1 48 THR .
1 49 GLU .
1 50 ALA .
1 51 ARG .
1 52 VAL .
1 53 ALA .
1 54 GLU .
1 55 ASN .
1 56 ARG .
1 57 PRO .
1 58 GLY .
1 59 ALA .
1 60 PHE .
1 61 ILE .
1 62 LYS .
1 63 GLN .
1 64 GLY .
1 65 ARG .
1 66 LYS .
1 67 LEU .
1 68 ASP .
1 69 ILE .
1 70 ASP .
1 71 PHE .
1 72 GLY .
1 73 ALA .
1 74 GLU .
1 75 GLY .
1 76 ASN .
1 77 ARG .
1 78 TYR .
1 79 TYR .
1 80 ALA .
1 81 ALA .
1 82 ASN .
1 83 TYR .
1 84 TRP .
1 85 GLN .
1 86 PHE .
1 87 PRO .
1 88 ASP .
1 89 GLY .
1 90 ILE .
1 91 TYR .
1 92 TYR .
1 93 GLU .
1 94 GLY .
1 95 CYS .
1 96 SER .
1 97 GLU .
1 98 ALA .
1 99 ASN .
1 100 VAL .
1 101 THR .
1 102 LYS .
1 103 GLU .
1 104 MET .
1 105 LEU .
1 106 VAL .
1 107 THR .
1 108 SER .
1 109 CYS .
1 110 VAL .
1 111 ASN .
1 112 ALA .
1 113 THR .
1 114 GLN .
1 115 ALA .
1 116 ALA .
1 117 ASN .
1 118 GLN .
1 119 ALA .
1 120 GLU .
1 121 PHE .
1 122 SER .
1 123 ARG .
1 124 GLU .
1 125 LYS .
1 126 GLN .
1 127 ASP .
1 128 SER .
1 129 LYS .
1 130 LEU .
1 131 HIS .
1 132 GLN .
1 133 ARG .
1 134 VAL .
1 135 LEU .
1 136 TRP .
1 137 ARG .
1 138 LEU .
1 139 ILE .
1 140 LYS .
1 141 GLU .
1 142 ILE .
1 143 CYS .
1 144 SER .
1 145 ALA .
1 146 LYS .
1 147 HIS .
1 148 CYS .
1 149 ASP .
1 150 PHE .
1 151 TRP .
1 152 LEU .
1 153 GLU .
1 154 ARG .
1 155 GLY .
1 156 ALA .
1 157 ALA .
1 158 LEU .
1 159 ARG .
1 160 VAL .
1 161 ALA .
1 162 VAL .
1 163 ASP .
1 164 GLN .
1 165 PRO .
1 166 ALA .
1 167 MET .
1 168 VAL .
1 169 CYS .
1 170 LEU .
1 171 LEU .
1 172 GLY .
1 173 PHE .
1 174 VAL .
1 175 TRP .
1 176 PHE .
1 177 ILE .
1 178 VAL .
1 179 LYS .
#
#
loop_
_struct_asym.id
_struct_asym.entity_id
_struct_asym.details
A 1 .
#
#
loop_
_pdbx_poly_seq_scheme.asym_id
_pdbx_poly_seq_scheme.entity_id
_pdbx_poly_seq_scheme.seq_id
_pdbx_poly_seq_scheme.mon_id
_pdbx_poly_seq_scheme.pdb_seq_num
_pdbx_poly_seq_scheme.auth_seq_num
_pdbx_poly_seq_scheme.pdb_mon_id
_pdbx_poly_seq_scheme.auth_mon_id
_pdbx_poly_seq_scheme.pdb_strand_id
_pdbx_poly_seq_scheme.pdb_ins_code
A 1 1 MET 1 1 MET MET A .
A 1 2 LYS 2 2 LYS LYS A .
A 1 3 ASN 3 3 ASN ASN A .
A 1 4 ARG 4 4 ARG ARG A .
A 1 5 LEU 5 5 LEU LEU A .
A 1 6 GLY 6 6 GLY GLY A .
A 1 7 THR 7 7 THR THR A .
A 1 8 TRP 8 8 TRP TRP A .
A 1 9 TRP 9 9 TRP TRP A .
A 1 10 VAL 10 10 VAL VAL A .
A 1 11 ALA 11 11 ALA ALA A .
A 1 12 ILE 12 12 ILE ILE A .
A 1 13 LEU 13 13 LEU LEU A .
A 1 14 CYS 14 14 CYS CYS A .
A 1 15 MET 15 15 MET MET A .
A 1 16 LEU 16 16 LEU LEU A .
A 1 17 LEU 17 17 LEU LEU A .
A 1 18 ALA 18 18 ALA ALA A .
A 1 19 SER 19 19 SER SER A .
A 1 20 HIS 20 20 HIS HIS A .
A 1 21 LEU 21 21 LEU LEU A .
A 1 22 SER 22 22 SER SER A .
A 1 23 THR 23 23 THR THR A .
A 1 24 VAL 24 24 VAL VAL A .
A 1 25 LYS 25 25 LYS LYS A .
A 1 26 ALA 26 26 ALA ALA A .
A 1 27 ARG 27 27 ARG ARG A .
A 1 28 GLY 28 28 GLY GLY A .
A 1 29 ILE 29 29 ILE ILE A .
A 1 30 LYS 30 30 LYS LYS A .
A 1 31 HIS 31 ? ? ? A .
A 1 32 ARG 32 ? ? ? A .
A 1 33 PHE 33 ? ? ? A .
A 1 34 LYS 34 ? ? ? A .
A 1 35 TRP 35 ? ? ? A .
A 1 36 ASN 36 ? ? ? A .
A 1 37 ARG 37 ? ? ? A .
A 1 38 LYS 38 ? ? ? A .
A 1 39 VAL 39 ? ? ? A .
A 1 40 LEU 40 ? ? ? A .
A 1 41 PRO 41 ? ? ? A .
A 1 42 SER 42 ? ? ? A .
A 1 43 SER 43 ? ? ? A .
A 1 44 GLY 44 ? ? ? A .
A 1 45 GLY 45 ? ? ? A .
A 1 46 GLN 46 ? ? ? A .
A 1 47 ILE 47 ? ? ? A .
A 1 48 THR 48 ? ? ? A .
A 1 49 GLU 49 ? ? ? A .
A 1 50 ALA 50 ? ? ? A .
A 1 51 ARG 51 ? ? ? A .
A 1 52 VAL 52 ? ? ? A .
A 1 53 ALA 53 ? ? ? A .
A 1 54 GLU 54 ? ? ? A .
A 1 55 ASN 55 ? ? ? A .
A 1 56 ARG 56 ? ? ? A .
A 1 57 PRO 57 ? ? ? A .
A 1 58 GLY 58 ? ? ? A .
A 1 59 ALA 59 ? ? ? A .
A 1 60 PHE 60 ? ? ? A .
A 1 61 ILE 61 ? ? ? A .
A 1 62 LYS 62 ? ? ? A .
A 1 63 GLN 63 ? ? ? A .
A 1 64 GLY 64 ? ? ? A .
A 1 65 ARG 65 ? ? ? A .
A 1 66 LYS 66 ? ? ? A .
A 1 67 LEU 67 ? ? ? A .
A 1 68 ASP 68 ? ? ? A .
A 1 69 ILE 69 ? ? ? A .
A 1 70 ASP 70 ? ? ? A .
A 1 71 PHE 71 ? ? ? A .
A 1 72 GLY 72 ? ? ? A .
A 1 73 ALA 73 ? ? ? A .
A 1 74 GLU 74 ? ? ? A .
A 1 75 GLY 75 ? ? ? A .
A 1 76 ASN 76 ? ? ? A .
A 1 77 ARG 77 ? ? ? A .
A 1 78 TYR 78 ? ? ? A .
A 1 79 TYR 79 ? ? ? A .
A 1 80 ALA 80 ? ? ? A .
A 1 81 ALA 81 ? ? ? A .
A 1 82 ASN 82 ? ? ? A .
A 1 83 TYR 83 ? ? ? A .
A 1 84 TRP 84 ? ? ? A .
A 1 85 GLN 85 ? ? ? A .
A 1 86 PHE 86 ? ? ? A .
A 1 87 PRO 87 ? ? ? A .
A 1 88 ASP 88 ? ? ? A .
A 1 89 GLY 89 ? ? ? A .
A 1 90 ILE 90 ? ? ? A .
A 1 91 TYR 91 ? ? ? A .
A 1 92 TYR 92 ? ? ? A .
A 1 93 GLU 93 ? ? ? A .
A 1 94 GLY 94 ? ? ? A .
A 1 95 CYS 95 ? ? ? A .
A 1 96 SER 96 ? ? ? A .
A 1 97 GLU 97 ? ? ? A .
A 1 98 ALA 98 ? ? ? A .
A 1 99 ASN 99 ? ? ? A .
A 1 100 VAL 100 ? ? ? A .
A 1 101 THR 101 ? ? ? A .
A 1 102 LYS 102 ? ? ? A .
A 1 103 GLU 103 ? ? ? A .
A 1 104 MET 104 ? ? ? A .
A 1 105 LEU 105 ? ? ? A .
A 1 106 VAL 106 ? ? ? A .
A 1 107 THR 107 ? ? ? A .
A 1 108 SER 108 ? ? ? A .
A 1 109 CYS 109 ? ? ? A .
A 1 110 VAL 110 ? ? ? A .
A 1 111 ASN 111 ? ? ? A .
A 1 112 ALA 112 ? ? ? A .
A 1 113 THR 113 ? ? ? A .
A 1 114 GLN 114 ? ? ? A .
A 1 115 ALA 115 ? ? ? A .
A 1 116 ALA 116 ? ? ? A .
A 1 117 ASN 117 ? ? ? A .
A 1 118 GLN 118 ? ? ? A .
A 1 119 ALA 119 ? ? ? A .
A 1 120 GLU 120 ? ? ? A .
A 1 121 PHE 121 ? ? ? A .
A 1 122 SER 122 ? ? ? A .
A 1 123 ARG 123 ? ? ? A .
A 1 124 GLU 124 ? ? ? A .
A 1 125 LYS 125 ? ? ? A .
A 1 126 GLN 126 ? ? ? A .
A 1 127 ASP 127 ? ? ? A .
A 1 128 SER 128 ? ? ? A .
A 1 129 LYS 129 ? ? ? A .
A 1 130 LEU 130 ? ? ? A .
A 1 131 HIS 131 ? ? ? A .
A 1 132 GLN 132 ? ? ? A .
A 1 133 ARG 133 ? ? ? A .
A 1 134 VAL 134 ? ? ? A .
A 1 135 LEU 135 ? ? ? A .
A 1 136 TRP 136 ? ? ? A .
A 1 137 ARG 137 ? ? ? A .
A 1 138 LEU 138 ? ? ? A .
A 1 139 ILE 139 ? ? ? A .
A 1 140 LYS 140 ? ? ? A .
A 1 141 GLU 141 ? ? ? A .
A 1 142 ILE 142 ? ? ? A .
A 1 143 CYS 143 ? ? ? A .
A 1 144 SER 144 ? ? ? A .
A 1 145 ALA 145 ? ? ? A .
A 1 146 LYS 146 ? ? ? A .
A 1 147 HIS 147 ? ? ? A .
A 1 148 CYS 148 ? ? ? A .
A 1 149 ASP 149 ? ? ? A .
A 1 150 PHE 150 ? ? ? A .
A 1 151 TRP 151 ? ? ? A .
A 1 152 LEU 152 ? ? ? A .
A 1 153 GLU 153 ? ? ? A .
A 1 154 ARG 154 ? ? ? A .
A 1 155 GLY 155 ? ? ? A .
A 1 156 ALA 156 ? ? ? A .
A 1 157 ALA 157 ? ? ? A .
A 1 158 LEU 158 ? ? ? A .
A 1 159 ARG 159 ? ? ? A .
A 1 160 VAL 160 ? ? ? A .
A 1 161 ALA 161 ? ? ? A .
A 1 162 VAL 162 ? ? ? A .
A 1 163 ASP 163 ? ? ? A .
A 1 164 GLN 164 ? ? ? A .
A 1 165 PRO 165 ? ? ? A .
A 1 166 ALA 166 ? ? ? A .
A 1 167 MET 167 ? ? ? A .
A 1 168 VAL 168 ? ? ? A .
A 1 169 CYS 169 ? ? ? A .
A 1 170 LEU 170 ? ? ? A .
A 1 171 LEU 171 ? ? ? A .
A 1 172 GLY 172 ? ? ? A .
A 1 173 PHE 173 ? ? ? A .
A 1 174 VAL 174 ? ? ? A .
A 1 175 TRP 175 ? ? ? A .
A 1 176 PHE 176 ? ? ? A .
A 1 177 ILE 177 ? ? ? A .
A 1 178 VAL 178 ? ? ? A .
A 1 179 LYS 179 ? ? ? A .
#
#
loop_
_ma_data.id
_ma_data.name
_ma_data.content_type
_ma_data.content_type_other_details
1
'Prion-like protein doppel {PDB ID=1z65, label_asym_id=A, auth_asym_id=A, SMTL ID=1z65.1.A}'
'template structure' .
2 . target .
3 'Target-template alignment by HHblits to 1z65, label_asym_id=A'
'target-template alignment' .
4 'model 4' 'model coordinates' .
5 SMTL 'reference database' .
6 PDB 'reference database' .
7 'Template search output' other 'Results of the sequence search'
#
#
loop_
_ma_data_group.ordinal_id
_ma_data_group.group_id
_ma_data_group.data_id
1 1 2
2 1 5
3 1 6
4 2 7
5 3 2
6 3 1
7 3 3
8 4 1
9 4 3
10 5 4
#
#
loop_
_ma_data_ref_db.data_id
_ma_data_ref_db.name
_ma_data_ref_db.location_url
_ma_data_ref_db.version
_ma_data_ref_db.release_date
5 SMTL https://swissmodel.expasy.org/templates/ . 2024-12-18
6 PDB https://www.wwpdb.org . 2024-12-13
#
#
loop_
_ma_target_entity.entity_id
_ma_target_entity.data_id
_ma_target_entity.origin
1 2 'reference database'
#
#
loop_
_ma_target_entity_instance.asym_id
_ma_target_entity_instance.entity_id
_ma_target_entity_instance.details
A 1 .
#
#
loop_
_ma_template_trans_matrix.id
_ma_template_trans_matrix.rot_matrix[1][1]
_ma_template_trans_matrix.rot_matrix[2][1]
_ma_template_trans_matrix.rot_matrix[3][1]
_ma_template_trans_matrix.rot_matrix[1][2]
_ma_template_trans_matrix.rot_matrix[2][2]
_ma_template_trans_matrix.rot_matrix[3][2]
_ma_template_trans_matrix.rot_matrix[1][3]
_ma_template_trans_matrix.rot_matrix[2][3]
_ma_template_trans_matrix.rot_matrix[3][3]
_ma_template_trans_matrix.tr_vector[1]
_ma_template_trans_matrix.tr_vector[2]
_ma_template_trans_matrix.tr_vector[3]
1 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000
1.000000 0 0 0
#
#
loop_
_ma_template_details.ordinal_id
_ma_template_details.template_id
_ma_template_details.template_origin
_ma_template_details.template_entity_type
_ma_template_details.template_trans_matrix_id
_ma_template_details.template_data_id
_ma_template_details.target_asym_id
_ma_template_details.template_label_asym_id
_ma_template_details.template_label_entity_id
_ma_template_details.template_model_num
_ma_template_details.template_auth_asym_id
1 1 'reference database' polymer 1 1 A A 1 1 A
#
#
loop_
_ma_template_poly.template_id
_ma_template_poly.seq_one_letter_code
_ma_template_poly.seq_one_letter_code_can
1 MKNRLGTWWVAILCMLLASHLSTVKARGIK MKNRLGTWWVAILCMLLASHLSTVKARGIK
#
#
loop_
_ma_template_poly_segment.id
_ma_template_poly_segment.template_id
_ma_template_poly_segment.residue_number_begin
_ma_template_poly_segment.residue_number_end
1 1 1 30
#
#
loop_
_ma_template_ref_db_details.template_id
_ma_template_ref_db_details.db_name
_ma_template_ref_db_details.db_name_other_details
_ma_template_ref_db_details.db_accession_code
_ma_template_ref_db_details.db_version_date
1 PDB . 1z65 2024-05-22
#
#
loop_
_ma_target_template_poly_mapping.id
_ma_target_template_poly_mapping.template_segment_id
_ma_target_template_poly_mapping.target_asym_id
_ma_target_template_poly_mapping.target_seq_id_begin
_ma_target_template_poly_mapping.target_seq_id_end
1 1 A 1 179
#
#
loop_
_ma_alignment_info.alignment_id
_ma_alignment_info.data_id
_ma_alignment_info.software_group_id
_ma_alignment_info.alignment_length
_ma_alignment_info.alignment_type
_ma_alignment_info.alignment_mode
1 3 1 179 'target-template pairwise alignment' local
#
#
loop_
_ma_alignment_details.ordinal_id
_ma_alignment_details.alignment_id
_ma_alignment_details.template_segment_id
_ma_alignment_details.target_asym_id
_ma_alignment_details.score_type
_ma_alignment_details.score_type_other_details
_ma_alignment_details.score_value
_ma_alignment_details.percent_sequence_identity
_ma_alignment_details.sequence_identity_denominator
_ma_alignment_details.sequence_identity_denominator_other_details
1 1 1 A 'HHblits e-value' . 1.1e-16 100.000
'Number of aligned residue pairs (not including the gaps)' .
#
#
loop_
_ma_alignment.ordinal_id
_ma_alignment.alignment_id
_ma_alignment.target_template_flag
_ma_alignment.sequence
1 1 1
MKNRLGTWWVAILCMLLASHLSTVKARGIKHRFKWNRKVLPSSGGQITEARVAENRPGAFIKQGRKLDIDFGAEGNRYYAANYWQFPDGIYYEGCSEANVTKEMLVTSCVNATQAANQAEFSREKQDSKLHQRVLWRLIKEICSAKHCDFWLERGAALRVAVDQPAMVCLLGFVWFIVK
2 1 2
MKNRLGTWWVAILCMLLASHLSTVKARGIK-----------------------------------------------------------------------------------------------------------------------------------------------------
#
#
loop_
_ma_protocol_step.ordinal_id
_ma_protocol_step.protocol_id
_ma_protocol_step.step_id
_ma_protocol_step.method_type
_ma_protocol_step.step_name
_ma_protocol_step.details
_ma_protocol_step.software_group_id
_ma_protocol_step.input_data_group_id
_ma_protocol_step.output_data_group_id
1 1 1 'template search' 'template search' 'SWISS-MODEL template search in PDB' 2
1 2
2 1 2 'template selection' 'template selection'
'Automatic template selection by SWISS-MODEL' 3 2 4
3 1 3 modeling 'homology modeling'
'SWISS-MODEL auto-model mode using ProMod3 on 1z65.1' 4 3 5
#
#
loop_
_ma_model_list.ordinal_id
_ma_model_list.model_id
_ma_model_list.model_group_id
_ma_model_list.model_name
_ma_model_list.model_group_name
_ma_model_list.data_id
_ma_model_list.model_type
_ma_model_list.model_type_other_details
1 1 1 'model 4' . 4 'Homology model' .
#
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_alt_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.auth_seq_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.label_entity_id
_atom_site.auth_asym_id
_atom_site.auth_comp_id
_atom_site.B_iso_or_equiv
_atom_site.pdbx_PDB_model_num
ATOM 1 N N . MET 1 1 ? A 1.172 0.113 0.011 1 1 A MET 0.450 1
ATOM 2 C CA . MET 1 1 ? A 1.989 0.009 -1.248 1 1 A MET 0.450 1
ATOM 3 C C . MET 1 1 ? A 3.374 -0.617 -1.048 1 1 A MET 0.450 1
ATOM 4 O O . MET 1 1 ? A 4.361 -0.104 -1.550 1 1 A MET 0.450 1
ATOM 5 C CB . MET 1 1 ? A 2.099 1.445 -1.841 1 1 A MET 0.450 1
ATOM 6 C CG . MET 1 1 ? A 2.611 1.548 -3.301 1 1 A MET 0.450 1
ATOM 7 S SD . MET 1 1 ? A 1.988 2.993 -4.217 1 1 A MET 0.450 1
ATOM 8 C CE . MET 1 1 ? A 2.918 4.223 -3.264 1 1 A MET 0.450 1
ATOM 9 N N . LYS 2 2 ? A 3.509 -1.742 -0.303 1 1 A LYS 0.500 1
ATOM 10 C CA . LYS 2 2 ? A 4.813 -2.362 -0.058 1 1 A LYS 0.500 1
ATOM 11 C C . LYS 2 2 ? A 5.926 -1.508 0.575 1 1 A LYS 0.500 1
ATOM 12 O O . LYS 2 2 ? A 6.945 -1.216 -0.055 1 1 A LYS 0.500 1
ATOM 13 C CB . LYS 2 2 ? A 5.307 -3.149 -1.292 1 1 A LYS 0.500 1
ATOM 14 C CG . LYS 2 2 ? A 5.694 -4.578 -0.909 1 1 A LYS 0.500 1
ATOM 15 C CD . LYS 2 2 ? A 6.845 -5.140 -1.750 1 1 A LYS 0.500 1
ATOM 16 C CE . LYS 2 2 ? A 6.455 -5.469 -3.188 1 1 A LYS 0.500 1
ATOM 17 N NZ . LYS 2 2 ? A 7.425 -6.436 -3.745 1 1 A LYS 0.500 1
ATOM 18 N N . ASN 3 3 ? A 5.762 -1.079 1.844 1 1 A ASN 0.350 1
ATOM 19 C CA . ASN 3 3 ? A 6.665 -0.117 2.461 1 1 A ASN 0.350 1
ATOM 20 C C . ASN 3 3 ? A 6.840 -0.475 3.920 1 1 A ASN 0.350 1
ATOM 21 O O . ASN 3 3 ? A 7.905 -0.889 4.366 1 1 A ASN 0.350 1
ATOM 22 C CB . ASN 3 3 ? A 6.101 1.319 2.297 1 1 A ASN 0.350 1
ATOM 23 C CG . ASN 3 3 ? A 7.163 2.384 2.562 1 1 A ASN 0.350 1
ATOM 24 O OD1 . ASN 3 3 ? A 7.740 2.927 1.622 1 1 A ASN 0.350 1
ATOM 25 N ND2 . ASN 3 3 ? A 7.438 2.712 3.843 1 1 A ASN 0.350 1
ATOM 26 N N . ARG 4 4 ? A 5.761 -0.335 4.708 1 1 A ARG 0.480 1
ATOM 27 C CA . ARG 4 4 ? A 5.758 -0.719 6.104 1 1 A ARG 0.480 1
ATOM 28 C C . ARG 4 4 ? A 5.132 -2.097 6.294 1 1 A ARG 0.480 1
ATOM 29 O O . ARG 4 4 ? A 5.464 -2.828 7.222 1 1 A ARG 0.480 1
ATOM 30 C CB . ARG 4 4 ? A 4.980 0.367 6.900 1 1 A ARG 0.480 1
ATOM 31 C CG . ARG 4 4 ? A 4.434 -0.108 8.260 1 1 A ARG 0.480 1
ATOM 32 C CD . ARG 4 4 ? A 4.167 0.970 9.309 1 1 A ARG 0.480 1
ATOM 33 N NE . ARG 4 4 ? A 5.520 1.319 9.837 1 1 A ARG 0.480 1
ATOM 34 C CZ . ARG 4 4 ? A 5.725 2.002 10.971 1 1 A ARG 0.480 1
ATOM 35 N NH1 . ARG 4 4 ? A 4.697 2.476 11.671 1 1 A ARG 0.480 1
ATOM 36 N NH2 . ARG 4 4 ? A 6.965 2.201 11.413 1 1 A ARG 0.480 1
ATOM 37 N N . LEU 5 5 ? A 4.197 -2.489 5.408 1 1 A LEU 0.490 1
ATOM 38 C CA . LEU 5 5 ? A 3.588 -3.809 5.370 1 1 A LEU 0.490 1
ATOM 39 C C . LEU 5 5 ? A 4.575 -4.980 5.268 1 1 A LEU 0.490 1
ATOM 40 O O . LEU 5 5 ? A 5.778 -4.806 5.087 1 1 A LEU 0.490 1
ATOM 41 C CB . LEU 5 5 ? A 2.501 -3.856 4.272 1 1 A LEU 0.490 1
ATOM 42 C CG . LEU 5 5 ? A 1.043 -4.105 4.727 1 1 A LEU 0.490 1
ATOM 43 C CD1 . LEU 5 5 ? A 0.776 -5.571 5.069 1 1 A LEU 0.490 1
ATOM 44 C CD2 . LEU 5 5 ? A 0.540 -3.208 5.866 1 1 A LEU 0.490 1
ATOM 45 N N . GLY 6 6 ? A 4.080 -6.225 5.399 1 1 A GLY 0.540 1
ATOM 46 C CA . GLY 6 6 ? A 4.935 -7.401 5.466 1 1 A GLY 0.540 1
ATOM 47 C C . GLY 6 6 ? A 4.434 -8.268 6.582 1 1 A GLY 0.540 1
ATOM 48 O O . GLY 6 6 ? A 3.569 -9.112 6.387 1 1 A GLY 0.540 1
ATOM 49 N N . THR 7 7 ? A 4.929 -8.026 7.809 1 1 A THR 0.570 1
ATOM 50 C CA . THR 7 7 ? A 4.567 -8.811 8.998 1 1 A THR 0.570 1
ATOM 51 C C . THR 7 7 ? A 3.617 -8.059 9.892 1 1 A THR 0.570 1
ATOM 52 O O . THR 7 7 ? A 2.997 -8.641 10.784 1 1 A THR 0.570 1
ATOM 53 C CB . THR 7 7 ? A 5.784 -9.334 9.777 1 1 A THR 0.570 1
ATOM 54 O OG1 . THR 7 7 ? A 6.292 -10.477 9.106 1 1 A THR 0.570 1
ATOM 55 C CG2 . THR 7 7 ? A 5.537 -9.811 11.218 1 1 A THR 0.570 1
ATOM 56 N N . TRP 8 8 ? A 3.326 -6.769 9.625 1 1 A TRP 0.460 1
ATOM 57 C CA . TRP 8 8 ? A 2.310 -6.060 10.390 1 1 A TRP 0.460 1
ATOM 58 C C . TRP 8 8 ? A 0.943 -6.743 10.311 1 1 A TRP 0.460 1
ATOM 59 O O . TRP 8 8 ? A 0.266 -6.904 11.329 1 1 A TRP 0.460 1
ATOM 60 C CB . TRP 8 8 ? A 2.211 -4.588 9.937 1 1 A TRP 0.460 1
ATOM 61 C CG . TRP 8 8 ? A 3.081 -3.632 10.731 1 1 A TRP 0.460 1
ATOM 62 C CD1 . TRP 8 8 ? A 4.194 -2.955 10.330 1 1 A TRP 0.460 1
ATOM 63 C CD2 . TRP 8 8 ? A 2.859 -3.265 12.099 1 1 A TRP 0.460 1
ATOM 64 N NE1 . TRP 8 8 ? A 4.657 -2.143 11.338 1 1 A TRP 0.460 1
ATOM 65 C CE2 . TRP 8 8 ? A 3.866 -2.332 12.442 1 1 A TRP 0.460 1
ATOM 66 C CE3 . TRP 8 8 ? A 1.910 -3.674 13.029 1 1 A TRP 0.460 1
ATOM 67 C CZ2 . TRP 8 8 ? A 3.930 -1.784 13.711 1 1 A TRP 0.460 1
ATOM 68 C CZ3 . TRP 8 8 ? A 1.993 -3.136 14.318 1 1 A TRP 0.460 1
ATOM 69 C CH2 . TRP 8 8 ? A 2.985 -2.203 14.654 1 1 A TRP 0.460 1
ATOM 70 N N . TRP 9 9 ? A 0.538 -7.214 9.111 1 1 A TRP 0.500 1
ATOM 71 C CA . TRP 9 9 ? A -0.617 -8.085 8.910 1 1 A TRP 0.500 1
ATOM 72 C C . TRP 9 9 ? A -0.472 -9.494 9.488 1 1 A TRP 0.500 1
ATOM 73 O O . TRP 9 9 ? A -1.416 -10.045 10.051 1 1 A TRP 0.500 1
ATOM 74 C CB . TRP 9 9 ? A -1.113 -8.149 7.428 1 1 A TRP 0.500 1
ATOM 75 C CG . TRP 9 9 ? A -0.498 -9.210 6.498 1 1 A TRP 0.500 1
ATOM 76 C CD1 . TRP 9 9 ? A 0.539 -9.055 5.622 1 1 A TRP 0.500 1
ATOM 77 C CD2 . TRP 9 9 ? A -0.781 -10.628 6.502 1 1 A TRP 0.500 1
ATOM 78 N NE1 . TRP 9 9 ? A 0.896 -10.258 5.065 1 1 A TRP 0.500 1
ATOM 79 C CE2 . TRP 9 9 ? A 0.153 -11.238 5.644 1 1 A TRP 0.500 1
ATOM 80 C CE3 . TRP 9 9 ? A -1.668 -11.403 7.239 1 1 A TRP 0.500 1
ATOM 81 C CZ2 . TRP 9 9 ? A 0.204 -12.610 5.477 1 1 A TRP 0.500 1
ATOM 82 C CZ3 . TRP 9 9 ? A -1.515 -12.796 7.184 1 1 A TRP 0.500 1
ATOM 83 C CH2 . TRP 9 9 ? A -0.580 -13.389 6.329 1 1 A TRP 0.500 1
ATOM 84 N N . VAL 10 10 ? A 0.720 -10.116 9.370 1 1 A VAL 0.610 1
ATOM 85 C CA . VAL 10 10 ? A 1.014 -11.475 9.837 1 1 A VAL 0.610 1
ATOM 86 C C . VAL 10 10 ? A 0.801 -11.568 11.333 1 1 A VAL 0.610 1
ATOM 87 O O . VAL 10 10 ? A 0.235 -12.534 11.856 1 1 A VAL 0.610 1
ATOM 88 C CB . VAL 10 10 ? A 2.440 -11.892 9.481 1 1 A VAL 0.610 1
ATOM 89 C CG1 . VAL 10 10 ? A 2.823 -13.296 9.990 1 1 A VAL 0.610 1
ATOM 90 C CG2 . VAL 10 10 ? A 2.609 -11.875 7.956 1 1 A VAL 0.610 1
ATOM 91 N N . ALA 11 11 ? A 1.189 -10.504 12.059 1 1 A ALA 0.690 1
ATOM 92 C CA . ALA 11 11 ? A 0.844 -10.274 13.445 1 1 A ALA 0.690 1
ATOM 93 C C . ALA 11 11 ? A -0.670 -10.244 13.714 1 1 A ALA 0.690 1
ATOM 94 O O . ALA 11 11 ? A -1.110 -10.805 14.707 1 1 A ALA 0.690 1
ATOM 95 C CB . ALA 11 11 ? A 1.495 -8.971 13.944 1 1 A ALA 0.690 1
ATOM 96 N N . ILE 12 12 ? A -1.509 -9.633 12.839 1 1 A ILE 0.640 1
ATOM 97 C CA . ILE 12 12 ? A -2.988 -9.616 12.906 1 1 A ILE 0.640 1
ATOM 98 C C . ILE 12 12 ? A -3.554 -11.006 12.810 1 1 A ILE 0.640 1
ATOM 99 O O . ILE 12 12 ? A -4.415 -11.402 13.600 1 1 A ILE 0.640 1
ATOM 100 C CB . ILE 12 12 ? A -3.676 -8.690 11.874 1 1 A ILE 0.640 1
ATOM 101 C CG1 . ILE 12 12 ? A -3.834 -7.257 12.424 1 1 A ILE 0.640 1
ATOM 102 C CG2 . ILE 12 12 ? A -5.060 -9.179 11.356 1 1 A ILE 0.640 1
ATOM 103 C CD1 . ILE 12 12 ? A -2.504 -6.533 12.612 1 1 A ILE 0.640 1
ATOM 104 N N . LEU 13 13 ? A -3.040 -11.829 11.890 1 1 A LEU 0.640 1
ATOM 105 C CA . LEU 13 13 ? A -3.506 -13.192 11.751 1 1 A LEU 0.640 1
ATOM 106 C C . LEU 13 13 ? A -2.988 -14.080 12.870 1 1 A LEU 0.640 1
ATOM 107 O O . LEU 13 13 ? A -3.559 -15.128 13.149 1 1 A LEU 0.640 1
ATOM 108 C CB . LEU 13 13 ? A -3.108 -13.766 10.383 1 1 A LEU 0.640 1
ATOM 109 C CG . LEU 13 13 ? A -4.017 -14.902 9.870 1 1 A LEU 0.640 1
ATOM 110 C CD1 . LEU 13 13 ? A -4.889 -14.390 8.718 1 1 A LEU 0.640 1
ATOM 111 C CD2 . LEU 13 13 ? A -3.202 -16.127 9.433 1 1 A LEU 0.640 1
ATOM 112 N N . CYS 14 14 ? A -1.931 -13.658 13.589 1 1 A CYS 0.670 1
ATOM 113 C CA . CYS 14 14 ? A -1.450 -14.330 14.781 1 1 A CYS 0.670 1
ATOM 114 C C . CYS 14 14 ? A -2.033 -13.706 16.058 1 1 A CYS 0.670 1
ATOM 115 O O . CYS 14 14 ? A -1.855 -14.243 17.140 1 1 A CYS 0.670 1
ATOM 116 C CB . CYS 14 14 ? A 0.105 -14.286 14.812 1 1 A CYS 0.670 1
ATOM 117 S SG . CYS 14 14 ? A 0.904 -15.629 15.762 1 1 A CYS 0.670 1
ATOM 118 N N . MET 15 15 ? A -2.792 -12.585 15.957 1 1 A MET 0.650 1
ATOM 119 C CA . MET 15 15 ? A -3.400 -11.852 17.066 1 1 A MET 0.650 1
ATOM 120 C C . MET 15 15 ? A -4.883 -12.138 17.147 1 1 A MET 0.650 1
ATOM 121 O O . MET 15 15 ? A -5.450 -12.312 18.221 1 1 A MET 0.650 1
ATOM 122 C CB . MET 15 15 ? A -3.287 -10.310 16.891 1 1 A MET 0.650 1
ATOM 123 C CG . MET 15 15 ? A -2.176 -9.619 17.707 1 1 A MET 0.650 1
ATOM 124 S SD . MET 15 15 ? A -2.610 -7.919 18.204 1 1 A MET 0.650 1
ATOM 125 C CE . MET 15 15 ? A -1.027 -7.573 19.020 1 1 A MET 0.650 1
ATOM 126 N N . LEU 16 16 ? A -5.553 -12.215 15.982 1 1 A LEU 0.660 1
ATOM 127 C CA . LEU 16 16 ? A -6.953 -12.591 15.896 1 1 A LEU 0.660 1
ATOM 128 C C . LEU 16 16 ? A -7.128 -14.059 16.158 1 1 A LEU 0.660 1
ATOM 129 O O . LEU 16 16 ? A -8.159 -14.516 16.649 1 1 A LEU 0.660 1
ATOM 130 C CB . LEU 16 16 ? A -7.563 -12.265 14.517 1 1 A LEU 0.660 1
ATOM 131 C CG . LEU 16 16 ? A -8.534 -11.069 14.496 1 1 A LEU 0.660 1
ATOM 132 C CD1 . LEU 16 16 ? A -9.600 -11.135 15.599 1 1 A LEU 0.660 1
ATOM 133 C CD2 . LEU 16 16 ? A -7.787 -9.734 14.506 1 1 A LEU 0.660 1
ATOM 134 N N . LEU 17 17 ? A -6.082 -14.830 15.834 1 1 A LEU 0.670 1
ATOM 135 C CA . LEU 17 17 ? A -6.014 -16.204 16.237 1 1 A LEU 0.670 1
ATOM 136 C C . LEU 17 17 ? A -5.452 -16.342 17.641 1 1 A LEU 0.670 1
ATOM 137 O O . LEU 17 17 ? A -5.810 -17.289 18.338 1 1 A LEU 0.670 1
ATOM 138 C CB . LEU 17 17 ? A -5.238 -17.058 15.226 1 1 A LEU 0.670 1
ATOM 139 C CG . LEU 17 17 ? A -6.129 -17.745 14.172 1 1 A LEU 0.670 1
ATOM 140 C CD1 . LEU 17 17 ? A -6.445 -16.814 12.996 1 1 A LEU 0.670 1
ATOM 141 C CD2 . LEU 17 17 ? A -5.457 -19.045 13.707 1 1 A LEU 0.670 1
ATOM 142 N N . ALA 18 18 ? A -4.621 -15.400 18.143 1 1 A ALA 0.730 1
ATOM 143 C CA . ALA 18 18 ? A -4.016 -15.488 19.471 1 1 A ALA 0.730 1
ATOM 144 C C . ALA 18 18 ? A -4.996 -15.812 20.586 1 1 A ALA 0.730 1
ATOM 145 O O . ALA 18 18 ? A -4.861 -16.841 21.257 1 1 A ALA 0.730 1
ATOM 146 C CB . ALA 18 18 ? A -3.320 -14.186 19.913 1 1 A ALA 0.730 1
ATOM 147 N N . SER 19 19 ? A -6.055 -15.011 20.772 1 1 A SER 0.660 1
ATOM 148 C CA . SER 19 19 ? A -7.113 -15.235 21.748 1 1 A SER 0.660 1
ATOM 149 C C . SER 19 19 ? A -7.881 -16.538 21.513 1 1 A SER 0.660 1
ATOM 150 O O . SER 19 19 ? A -8.133 -17.278 22.468 1 1 A SER 0.660 1
ATOM 151 C CB . SER 19 19 ? A -8.105 -14.049 21.836 1 1 A SER 0.660 1
ATOM 152 O OG . SER 19 19 ? A -8.696 -13.793 20.561 1 1 A SER 0.660 1
ATOM 153 N N . HIS 20 20 ? A -8.185 -16.864 20.233 1 1 A HIS 0.650 1
ATOM 154 C CA . HIS 20 20 ? A -8.750 -18.112 19.711 1 1 A HIS 0.650 1
ATOM 155 C C . HIS 20 20 ? A -7.952 -19.364 20.106 1 1 A HIS 0.650 1
ATOM 156 O O . HIS 20 20 ? A -8.515 -20.412 20.417 1 1 A HIS 0.650 1
ATOM 157 C CB . HIS 20 20 ? A -8.991 -17.998 18.175 1 1 A HIS 0.650 1
ATOM 158 C CG . HIS 20 20 ? A -9.254 -19.279 17.437 1 1 A HIS 0.650 1
ATOM 159 N ND1 . HIS 20 20 ? A -8.193 -20.109 17.146 1 1 A HIS 0.650 1
ATOM 160 C CD2 . HIS 20 20 ? A -10.430 -19.863 17.060 1 1 A HIS 0.650 1
ATOM 161 C CE1 . HIS 20 20 ? A -8.732 -21.186 16.608 1 1 A HIS 0.650 1
ATOM 162 N NE2 . HIS 20 20 ? A -10.076 -21.084 16.535 1 1 A HIS 0.650 1
ATOM 163 N N . LEU 21 21 ? A -6.612 -19.268 20.149 1 1 A LEU 0.650 1
ATOM 164 C CA . LEU 21 21 ? A -5.737 -20.340 20.577 1 1 A LEU 0.650 1
ATOM 165 C C . LEU 21 21 ? A -5.121 -20.133 21.973 1 1 A LEU 0.650 1
ATOM 166 O O . LEU 21 21 ? A -4.239 -20.921 22.384 1 1 A LEU 0.650 1
ATOM 167 C CB . LEU 21 21 ? A -4.743 -20.683 19.433 1 1 A LEU 0.650 1
ATOM 168 C CG . LEU 21 21 ? A -3.740 -19.595 19.009 1 1 A LEU 0.650 1
ATOM 169 C CD1 . LEU 21 21 ? A -2.320 -19.789 19.556 1 1 A LEU 0.650 1
ATOM 170 C CD2 . LEU 21 21 ? A -3.688 -19.536 17.478 1 1 A LEU 0.650 1
ATOM 171 N N . SER 22 22 ? A -5.623 -19.172 22.777 1 1 A SER 0.670 1
ATOM 172 C CA . SER 22 22 ? A -5.153 -18.811 24.122 1 1 A SER 0.670 1
ATOM 173 C C . SER 22 22 ? A -6.289 -18.874 25.133 1 1 A SER 0.670 1
ATOM 174 O O . SER 22 22 ? A -6.473 -19.866 25.824 1 1 A SER 0.670 1
ATOM 175 C CB . SER 22 22 ? A -4.554 -17.377 24.203 1 1 A SER 0.670 1
ATOM 176 O OG . SER 22 22 ? A -3.164 -17.383 23.866 1 1 A SER 0.670 1
ATOM 177 N N . THR 23 23 ? A -7.088 -17.792 25.266 1 1 A THR 0.640 1
ATOM 178 C CA . THR 23 23 ? A -8.154 -17.660 26.272 1 1 A THR 0.640 1
ATOM 179 C C . THR 23 23 ? A -9.457 -18.309 25.832 1 1 A THR 0.640 1
ATOM 180 O O . THR 23 23 ? A -10.302 -18.672 26.645 1 1 A THR 0.640 1
ATOM 181 C CB . THR 23 23 ? A -8.419 -16.186 26.593 1 1 A THR 0.640 1
ATOM 182 O OG1 . THR 23 23 ? A -7.292 -15.622 27.266 1 1 A THR 0.640 1
ATOM 183 C CG2 . THR 23 23 ? A -9.622 -15.941 27.510 1 1 A THR 0.640 1
ATOM 184 N N . VAL 24 24 ? A -9.643 -18.532 24.516 1 1 A VAL 0.640 1
ATOM 185 C CA . VAL 24 24 ? A -10.758 -19.293 23.950 1 1 A VAL 0.640 1
ATOM 186 C C . VAL 24 24 ? A -10.594 -20.777 24.225 1 1 A VAL 0.640 1
ATOM 187 O O . VAL 24 24 ? A -11.532 -21.566 24.132 1 1 A VAL 0.640 1
ATOM 188 C CB . VAL 24 24 ? A -10.829 -19.016 22.447 1 1 A VAL 0.640 1
ATOM 189 C CG1 . VAL 24 24 ? A -11.511 -20.084 21.560 1 1 A VAL 0.640 1
ATOM 190 C CG2 . VAL 24 24 ? A -11.443 -17.625 22.203 1 1 A VAL 0.640 1
ATOM 191 N N . LYS 25 25 ? A -9.374 -21.209 24.593 1 1 A LYS 0.630 1
ATOM 192 C CA . LYS 25 25 ? A -9.127 -22.574 24.980 1 1 A LYS 0.630 1
ATOM 193 C C . LYS 25 25 ? A -9.823 -22.979 26.261 1 1 A LYS 0.630 1
ATOM 194 O O . LYS 25 25 ? A -9.678 -22.360 27.317 1 1 A LYS 0.630 1
ATOM 195 C CB . LYS 25 25 ? A -7.628 -22.868 25.146 1 1 A LYS 0.630 1
ATOM 196 C CG . LYS 25 25 ? A -6.775 -22.478 23.940 1 1 A LYS 0.630 1
ATOM 197 C CD . LYS 25 25 ? A -7.154 -23.179 22.634 1 1 A LYS 0.630 1
ATOM 198 C CE . LYS 25 25 ? A -5.943 -23.782 21.929 1 1 A LYS 0.630 1
ATOM 199 N NZ . LYS 25 25 ? A -6.328 -24.171 20.560 1 1 A LYS 0.630 1
ATOM 200 N N . ALA 26 26 ? A -10.544 -24.099 26.189 1 1 A ALA 0.610 1
ATOM 201 C CA . ALA 26 26 ? A -11.416 -24.543 27.234 1 1 A ALA 0.610 1
ATOM 202 C C . ALA 26 26 ? A -11.726 -25.985 26.917 1 1 A ALA 0.610 1
ATOM 203 O O . ALA 26 26 ? A -12.751 -26.342 26.351 1 1 A ALA 0.610 1
ATOM 204 C CB . ALA 26 26 ? A -12.700 -23.703 27.299 1 1 A ALA 0.610 1
ATOM 205 N N . ARG 27 27 ? A -10.789 -26.902 27.227 1 1 A ARG 0.410 1
ATOM 206 C CA . ARG 27 27 ? A -11.038 -28.324 27.061 1 1 A ARG 0.410 1
ATOM 207 C C . ARG 27 27 ? A -11.940 -28.901 28.149 1 1 A ARG 0.410 1
ATOM 208 O O . ARG 27 27 ? A -12.473 -30.003 28.039 1 1 A ARG 0.410 1
ATOM 209 C CB . ARG 27 27 ? A -9.683 -29.080 27.041 1 1 A ARG 0.410 1
ATOM 210 C CG . ARG 27 27 ? A -8.880 -29.030 28.359 1 1 A ARG 0.410 1
ATOM 211 C CD . ARG 27 27 ? A -9.249 -30.102 29.404 1 1 A ARG 0.410 1
ATOM 212 N NE . ARG 27 27 ? A -8.137 -31.105 29.514 1 1 A ARG 0.410 1
ATOM 213 C CZ . ARG 27 27 ? A -6.954 -30.872 30.103 1 1 A ARG 0.410 1
ATOM 214 N NH1 . ARG 27 27 ? A -6.651 -29.684 30.624 1 1 A ARG 0.410 1
ATOM 215 N NH2 . ARG 27 27 ? A -6.048 -31.849 30.153 1 1 A ARG 0.410 1
ATOM 216 N N . GLY 28 28 ? A -12.077 -28.172 29.275 1 1 A GLY 0.400 1
ATOM 217 C CA . GLY 28 28 ? A -12.656 -28.652 30.525 1 1 A GLY 0.400 1
ATOM 218 C C . GLY 28 28 ? A -14.089 -28.214 30.661 1 1 A GLY 0.400 1
ATOM 219 O O . GLY 28 28 ? A -14.446 -27.491 31.594 1 1 A GLY 0.400 1
ATOM 220 N N . ILE 29 29 ? A -14.917 -28.666 29.704 1 1 A ILE 0.610 1
ATOM 221 C CA . ILE 29 29 ? A -16.285 -28.222 29.429 1 1 A ILE 0.610 1
ATOM 222 C C . ILE 29 29 ? A -16.316 -26.768 28.911 1 1 A ILE 0.610 1
ATOM 223 O O . ILE 29 29 ? A -15.327 -26.059 29.045 1 1 A ILE 0.610 1
ATOM 224 C CB . ILE 29 29 ? A -17.258 -28.561 30.581 1 1 A ILE 0.610 1
ATOM 225 C CG1 . ILE 29 29 ? A -18.496 -29.387 30.159 1 1 A ILE 0.610 1
ATOM 226 C CG2 . ILE 29 29 ? A -17.652 -27.355 31.458 1 1 A ILE 0.610 1
ATOM 227 C CD1 . ILE 29 29 ? A -18.326 -30.864 30.534 1 1 A ILE 0.610 1
ATOM 228 N N . LYS 30 30 ? A -17.454 -26.314 28.318 1 1 A LYS 0.420 1
ATOM 229 C CA . LYS 30 30 ? A -17.724 -24.921 27.915 1 1 A LYS 0.420 1
ATOM 230 C C . LYS 30 30 ? A -16.752 -24.190 26.916 1 1 A LYS 0.420 1
ATOM 231 O O . LYS 30 30 ? A -16.116 -24.894 26.064 1 1 A LYS 0.420 1
ATOM 232 C CB . LYS 30 30 ? A -18.108 -23.980 29.118 1 1 A LYS 0.420 1
ATOM 233 C CG . LYS 30 30 ? A -16.992 -23.855 30.172 1 1 A LYS 0.420 1
ATOM 234 C CD . LYS 30 30 ? A -17.035 -22.653 31.126 1 1 A LYS 0.420 1
ATOM 235 C CE . LYS 30 30 ? A -15.756 -22.586 31.968 1 1 A LYS 0.420 1
ATOM 236 N NZ . LYS 30 30 ? A -15.696 -23.738 32.901 1 1 A LYS 0.420 1
ATOM 237 O OXT . LYS 30 30 ? A -16.743 -22.911 26.978 1 1 A LYS 0.420 1
#
#
loop_
_atom_type.symbol
C
N
O
S
#
#
loop_
_ma_qa_metric.id
_ma_qa_metric.name
_ma_qa_metric.description
_ma_qa_metric.type
_ma_qa_metric.mode
_ma_qa_metric.type_other_details
_ma_qa_metric.software_group_id
1 QMEANDisCo 'Predicted accuracy according to all-atom lDDT in [0,1].'
'pLDDT all-atom in [0,1]' local . 5
2 QMEANDisCo 'Predicted accuracy according to all-atom lDDT in [0,1].'
'pLDDT all-atom in [0,1]' global . 5
3 GMQE
'Global Model Quality Estimate of the model accuracy, calculated by SWISS-MODEL.'
'normalized score' global . 6
#
#
loop_
_ma_qa_metric_global.ordinal_id
_ma_qa_metric_global.model_id
_ma_qa_metric_global.metric_id
_ma_qa_metric_global.metric_value
1 1 2 0.576
2 1 3 0.032
#
#
loop_
_ma_qa_metric_local.ordinal_id
_ma_qa_metric_local.model_id
_ma_qa_metric_local.label_asym_id
_ma_qa_metric_local.label_seq_id
_ma_qa_metric_local.label_comp_id
_ma_qa_metric_local.metric_id
_ma_qa_metric_local.metric_value
1 1 A 1 MET 1 0.450
2 1 A 2 LYS 1 0.500
3 1 A 3 ASN 1 0.350
4 1 A 4 ARG 1 0.480
5 1 A 5 LEU 1 0.490
6 1 A 6 GLY 1 0.540
7 1 A 7 THR 1 0.570
8 1 A 8 TRP 1 0.460
9 1 A 9 TRP 1 0.500
10 1 A 10 VAL 1 0.610
11 1 A 11 ALA 1 0.690
12 1 A 12 ILE 1 0.640
13 1 A 13 LEU 1 0.640
14 1 A 14 CYS 1 0.670
15 1 A 15 MET 1 0.650
16 1 A 16 LEU 1 0.660
17 1 A 17 LEU 1 0.670
18 1 A 18 ALA 1 0.730
19 1 A 19 SER 1 0.660
20 1 A 20 HIS 1 0.650
21 1 A 21 LEU 1 0.650
22 1 A 22 SER 1 0.670
23 1 A 23 THR 1 0.640
24 1 A 24 VAL 1 0.640
25 1 A 25 LYS 1 0.630
26 1 A 26 ALA 1 0.610
27 1 A 27 ARG 1 0.410
28 1 A 28 GLY 1 0.400
29 1 A 29 ILE 1 0.610
30 1 A 30 LYS 1 0.420
#
#
loop_
_pdbx_data_usage.id
_pdbx_data_usage.type
_pdbx_data_usage.details
_pdbx_data_usage.url
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