data_SMR-265f689c53907e19309a387837ac6d4c_1
_entry.id SMR-265f689c53907e19309a387837ac6d4c_1
_struct.entry_id SMR-265f689c53907e19309a387837ac6d4c_1
_struct.pdbx_model_details
;This model was generated unsupervised by the SWISS-MODEL homology-modelling pipeline for the SWISS-MODEL Repository, a database of annotated 3D protein structure models. The modelled monomer covers following UniProtKB entries:

  - P51865/ TDGF1_MOUSE, Teratocarcinoma-derived growth factor

Estimated model accuracy of this model is 0.138, calculated by SWISS-MODEL as Global Model Quality Estimate (GMQE).
;
_struct.pdbx_structure_determination_methodology computational
_struct.title 'Model for UniProtKB entries P51865'
_audit_conform.dict_location https://raw.githubusercontent.com/ihmwg/ModelCIF/d18ba38/base/mmcif_ma-core.dic
_audit_conform.dict_name mmcif_ma.dic
_audit_conform.dict_version 1.4.6
#
loop_
_citation.id
_citation.title
_citation.journal_abbrev
_citation.journal_volume
_citation.page_first
_citation.page_last
_citation.year
_citation.pdbx_database_id_PubMed
_citation.pdbx_database_id_DOI
primary 'The SWISS-MODEL Repository - new features and functionality'
'Nucleic Acids Res.' 45 D313 D319 2017 27899672 10.1093/nar/gkw1132
2 'SWISS-MODEL: homology modelling of protein structures and complexes'
'Nucleic Acids Res.' 46 W296 W303 2018 29788355 10.1093/nar/gky427
3 'ProMod3 - A versatile homology modelling toolbox' 'PLoS Comput. Biol.' 17(1)
1 18 2021 33507980 10.1371/journal.pcbi.1008667
4 'QMEANDisCo - distance constraints applied on model quality estimation'
Bioinformatics 36 1765 1771 2020 31697312 10.1093/bioinformatics/btz828
5
'OpenStructure: an integrated software framework for computational structural biology'
'Acta Crystallogr., Sect. D: Biol. Crystallogr.' 69 701 709 2013 23633579
10.1107/S0907444913007051
6 'BLAST+: architecture and applications' 'BMC Bioinf.' 10 421 . 2009 20003500
10.1186/1471-2105-10-421
7 'HH-suite3 for fast remote homology detection and deep protein annotation'
'BMC Bioinf.' 20 473 . 2019 31521110 10.1186/s12859-019-3019-7
#
#
loop_
_citation_author.citation_id
_citation_author.name
_citation_author.ordinal
primary 'Bienert, S.' 1
primary 'Waterhouse, A.' 2
primary 'de Beer, T.A.P.' 3
primary 'Tauriello, G.' 4
primary 'Studer, G.' 5
primary 'Bordoli, L.' 6
primary 'Schwede, T.' 7
2 'Waterhouse, A.' 8
2 'Bertoni, M.' 9
2 'Bienert, S.' 10
2 'Studer, G.' 11
2 'Tauriello, G.' 12
2 'Gumienny, R.' 13
2 'Heer, F.T.' 14
2 'de Beer, T.A.P.' 15
2 'Rempfer, C.' 16
2 'Bordoli, L.' 17
2 'Lepore, R.' 18
2 'Schwede, T.' 19
3 'Studer, G.' 20
3 'Tauriello, G.' 21
3 'Bienert, S.' 22
3 'Biasini, M.' 23
3 'Johner, N.' 24
3 'Schwede, T.' 25
4 'Studer, G.' 26
4 'Rempfer, C.' 27
4 'Waterhouse, A.M.' 28
4 'Gumienny, R.' 29
4 'Haas, J.' 30
4 'Schwede, T.' 31
5 'Biasini, M.' 32
5 'Schmidt, T.' 33
5 'Bienert, S.' 34
5 'Mariani, V.' 35
5 'Studer, G.' 36
5 'Haas, J.' 37
5 'Johner, N.' 38
5 'Schenk, A.D.' 39
5 'Philippsen, A.' 40
5 'Schwede, T.' 41
6 'Camacho, C.' 42
6 'Coulouris, G.' 43
6 'Avagyan, V.' 44
6 'Ma, N.' 45
6 'Papadopoulos, J.' 46
6 'Bealer, K.' 47
6 'Madden, T.L.' 48
7 'Steinegger, M.' 49
7 'Meier, M.' 50
7 'Mirdita, M.' 51
7 'Vohringer, H.' 52
7 'Haunsberger, S.J.' 53
7 'Soding, J.' 54
#
#
loop_
_software.pdbx_ordinal
_software.name
_software.classification
_software.description
_software.version
_software.type
_software.location
_software.citation_id
1 SWISS-MODEL 'model building' 'Homology modelling web service' 2024-10.3
package https://swissmodel.expasy.org 2
2 ProMod3 'model building' 'Modular homology modelling engine' 3.4.1 library
https://git.scicore.unibas.ch/schwede/ProMod3 3
3 QMEAN 'model building' 'QMEAN - Qualitative Model Energy ANalysis' 4.3.1
library https://git.scicore.unibas.ch/schwede/QMEAN 4
4 OpenStructure 'data processing'
'Open-Source Computational Structural Biology Framework' 2.8.0 package
https://openstructure.org/ 5
5 BLAST 'data collection' . 2.2.31 package https://blast.ncbi.nlm.nih.gov 6
6 HH-suite 'data collection' 'HH-suite3 for sensitive sequence searching' 3.2.0
package https://github.com/soedinglab/hh-suite 7
#
#
loop_
_ma_software_group.ordinal_id
_ma_software_group.group_id
_ma_software_group.software_id
_ma_software_group.parameter_group_id
1 1 5 .
2 2 1 .
3 2 4 .
4 2 5 .
5 2 6 .
6 3 1 .
7 3 4 .
8 4 1 .
9 4 2 .
10 4 4 .
11 5 3 .
12 6 1 .
13 6 3 .
14 6 4 .
#
#
loop_
_audit_author.name
_audit_author.pdbx_ordinal
'Bienert, S.' 1
'Waterhouse, A.' 2
'de Beer, T.A.P.' 3
'Tauriello, G.' 4
'Studer, G.' 5
'Bordoli, L.' 6
'Schwede, T.' 7
#
#
loop_
_chem_comp.id
_chem_comp.type
_chem_comp.name
_chem_comp.formula
_chem_comp.formula_weight
_chem_comp.ma_provenance
ALA 'L-peptide linking' ALANINE 'C3 H7 N O2' 89.094 'CCD Core'
ARG 'L-peptide linking' ARGININE 'C6 H15 N4 O2 1' 175.212 'CCD Core'
ASN 'L-peptide linking' ASPARAGINE 'C4 H8 N2 O3' 132.119 'CCD Core'
ASP 'L-peptide linking' 'ASPARTIC ACID' 'C4 H7 N O4' 133.103 'CCD Core'
CYS 'L-peptide linking' CYSTEINE 'C3 H7 N O2 S' 121.154 'CCD Core'
GLN 'L-peptide linking' GLUTAMINE 'C5 H10 N2 O3' 146.146 'CCD Core'
GLU 'L-peptide linking' 'GLUTAMIC ACID' 'C5 H9 N O4' 147.130 'CCD Core'
GLY 'peptide linking' GLYCINE 'C2 H5 N O2' 75.067 'CCD Core'
HIS 'L-peptide linking' HISTIDINE 'C6 H10 N3 O2 1' 156.165 'CCD Core'
ILE 'L-peptide linking' ISOLEUCINE 'C6 H13 N O2' 131.175 'CCD Core'
LEU 'L-peptide linking' LEUCINE 'C6 H13 N O2' 131.175 'CCD Core'
LYS 'L-peptide linking' LYSINE 'C6 H15 N2 O2 1' 147.198 'CCD Core'
MET 'L-peptide linking' METHIONINE 'C5 H11 N O2 S' 149.208 'CCD Core'
PHE 'L-peptide linking' PHENYLALANINE 'C9 H11 N O2' 165.192 'CCD Core'
PRO 'L-peptide linking' PROLINE 'C5 H9 N O2' 115.132 'CCD Core'
SER 'L-peptide linking' SERINE 'C3 H7 N O3' 105.093 'CCD Core'
THR 'L-peptide linking' THREONINE 'C4 H9 N O3' 119.120 'CCD Core'
TRP 'L-peptide linking' TRYPTOPHAN 'C11 H12 N2 O2' 204.229 'CCD Core'
TYR 'L-peptide linking' TYROSINE 'C9 H11 N O3' 181.191 'CCD Core'
UNK 'L-peptide linking' UNKNOWN . . 'CCD local'
VAL 'L-peptide linking' VALINE 'C5 H11 N O2' 117.148 'CCD Core'
#
#
loop_
_entity.id
_entity.type
_entity.src_method
_entity.pdbx_description
_entity.formula_weight
_entity.pdbx_number_of_molecules
_entity.details
1 polymer man . 21738.316 1 .
#
#
loop_
_struct_ref.id
_struct_ref.entity_id
_struct_ref.db_name
_struct_ref.db_code
_struct_ref.pdbx_db_accession
_struct_ref.pdbx_align_begin
_struct_ref.pdbx_seq_one_letter_code
_struct_ref.details
1 1 UNP TDGF1_MOUSE P51865 1
;MGYFSSSVVLLVAISSAFEFGPVAGRDLAIRDNSIWDQKEPAVRDRSFQFVPSVGIQNSKSLNKTCCLNG
GTCILGSFCACPPSFYGRNCEHDVRKEHCGSILHGTWLPKKCSLCRCWHGQLHCLPQTFLPGCDGHVMDQ
DLKASGTPCQTPSVTTTFMLAGACLFLDMKV
;
'Teratocarcinoma-derived growth factor'
#
#
loop_
_struct_ref_seq.align_id
_struct_ref_seq.ref_id
_struct_ref_seq.seq_align_beg
_struct_ref_seq.seq_align_end
_struct_ref_seq.db_align_beg
_struct_ref_seq.db_align_end
1 1 1 171 1 171
#
#
loop_
_ma_target_ref_db_details.target_entity_id
_ma_target_ref_db_details.db_name
_ma_target_ref_db_details.db_name_other_details
_ma_target_ref_db_details.db_code
_ma_target_ref_db_details.db_accession
_ma_target_ref_db_details.seq_db_isoform
_ma_target_ref_db_details.seq_db_align_begin
_ma_target_ref_db_details.seq_db_align_end
_ma_target_ref_db_details.ncbi_taxonomy_id
_ma_target_ref_db_details.organism_scientific
_ma_target_ref_db_details.seq_db_sequence_version_date
_ma_target_ref_db_details.seq_db_sequence_checksum
1 UNP . TDGF1_MOUSE P51865 . 1 171 10090 'Mus musculus (Mouse)' 2023-11-08
C53400EBACDB5380
#
#
loop_
_entity_poly.entity_id
_entity_poly.type
_entity_poly.nstd_linkage
_entity_poly.nstd_monomer
_entity_poly.pdbx_strand_id
_entity_poly.pdbx_seq_one_letter_code
_entity_poly.pdbx_seq_one_letter_code_can
1 polypeptide(L) no no A
;MGYFSSSVVLLVAISSAFEFGPVAGRDLAIRDNSIWDQKEPAVRDRSFQFVPSVGIQNSKSLNKTCCLNG
GTCILGSFCACPPSFYGRNCEHDVRKEHCGSILHGTWLPKKCSLCRCWHGQLHCLPQTFLPGCDGHVMDQ
DLKASGTPCQTPSVTTTFMLAGACLFLDMKV
;

;MGYFSSSVVLLVAISSAFEFGPVAGRDLAIRDNSIWDQKEPAVRDRSFQFVPSVGIQNSKSLNKTCCLNG
GTCILGSFCACPPSFYGRNCEHDVRKEHCGSILHGTWLPKKCSLCRCWHGQLHCLPQTFLPGCDGHVMDQ
DLKASGTPCQTPSVTTTFMLAGACLFLDMKV
;

#
#
loop_
_entity_poly_seq.entity_id
_entity_poly_seq.num
_entity_poly_seq.mon_id
_entity_poly_seq.hetero
1 1 MET .
1 2 GLY .
1 3 TYR .
1 4 PHE .
1 5 SER .
1 6 SER .
1 7 SER .
1 8 VAL .
1 9 VAL .
1 10 LEU .
1 11 LEU .
1 12 VAL .
1 13 ALA .
1 14 ILE .
1 15 SER .
1 16 SER .
1 17 ALA .
1 18 PHE .
1 19 GLU .
1 20 PHE .
1 21 GLY .
1 22 PRO .
1 23 VAL .
1 24 ALA .
1 25 GLY .
1 26 ARG .
1 27 ASP .
1 28 LEU .
1 29 ALA .
1 30 ILE .
1 31 ARG .
1 32 ASP .
1 33 ASN .
1 34 SER .
1 35 ILE .
1 36 TRP .
1 37 ASP .
1 38 GLN .
1 39 LYS .
1 40 GLU .
1 41 PRO .
1 42 ALA .
1 43 VAL .
1 44 ARG .
1 45 ASP .
1 46 ARG .
1 47 SER .
1 48 PHE .
1 49 GLN .
1 50 PHE .
1 51 VAL .
1 52 PRO .
1 53 SER .
1 54 VAL .
1 55 GLY .
1 56 ILE .
1 57 GLN .
1 58 ASN .
1 59 SER .
1 60 LYS .
1 61 SER .
1 62 LEU .
1 63 ASN .
1 64 LYS .
1 65 THR .
1 66 CYS .
1 67 CYS .
1 68 LEU .
1 69 ASN .
1 70 GLY .
1 71 GLY .
1 72 THR .
1 73 CYS .
1 74 ILE .
1 75 LEU .
1 76 GLY .
1 77 SER .
1 78 PHE .
1 79 CYS .
1 80 ALA .
1 81 CYS .
1 82 PRO .
1 83 PRO .
1 84 SER .
1 85 PHE .
1 86 TYR .
1 87 GLY .
1 88 ARG .
1 89 ASN .
1 90 CYS .
1 91 GLU .
1 92 HIS .
1 93 ASP .
1 94 VAL .
1 95 ARG .
1 96 LYS .
1 97 GLU .
1 98 HIS .
1 99 CYS .
1 100 GLY .
1 101 SER .
1 102 ILE .
1 103 LEU .
1 104 HIS .
1 105 GLY .
1 106 THR .
1 107 TRP .
1 108 LEU .
1 109 PRO .
1 110 LYS .
1 111 LYS .
1 112 CYS .
1 113 SER .
1 114 LEU .
1 115 CYS .
1 116 ARG .
1 117 CYS .
1 118 TRP .
1 119 HIS .
1 120 GLY .
1 121 GLN .
1 122 LEU .
1 123 HIS .
1 124 CYS .
1 125 LEU .
1 126 PRO .
1 127 GLN .
1 128 THR .
1 129 PHE .
1 130 LEU .
1 131 PRO .
1 132 GLY .
1 133 CYS .
1 134 ASP .
1 135 GLY .
1 136 HIS .
1 137 VAL .
1 138 MET .
1 139 ASP .
1 140 GLN .
1 141 ASP .
1 142 LEU .
1 143 LYS .
1 144 ALA .
1 145 SER .
1 146 GLY .
1 147 THR .
1 148 PRO .
1 149 CYS .
1 150 GLN .
1 151 THR .
1 152 PRO .
1 153 SER .
1 154 VAL .
1 155 THR .
1 156 THR .
1 157 THR .
1 158 PHE .
1 159 MET .
1 160 LEU .
1 161 ALA .
1 162 GLY .
1 163 ALA .
1 164 CYS .
1 165 LEU .
1 166 PHE .
1 167 LEU .
1 168 ASP .
1 169 MET .
1 170 LYS .
1 171 VAL .
#
#
loop_
_struct_asym.id
_struct_asym.entity_id
_struct_asym.details
A 1 .
#
#
loop_
_pdbx_poly_seq_scheme.asym_id
_pdbx_poly_seq_scheme.entity_id
_pdbx_poly_seq_scheme.seq_id
_pdbx_poly_seq_scheme.mon_id
_pdbx_poly_seq_scheme.pdb_seq_num
_pdbx_poly_seq_scheme.auth_seq_num
_pdbx_poly_seq_scheme.pdb_mon_id
_pdbx_poly_seq_scheme.auth_mon_id
_pdbx_poly_seq_scheme.pdb_strand_id
_pdbx_poly_seq_scheme.pdb_ins_code
A 1 1 MET 1 ? ? ? A .
A 1 2 GLY 2 ? ? ? A .
A 1 3 TYR 3 ? ? ? A .
A 1 4 PHE 4 ? ? ? A .
A 1 5 SER 5 ? ? ? A .
A 1 6 SER 6 ? ? ? A .
A 1 7 SER 7 ? ? ? A .
A 1 8 VAL 8 ? ? ? A .
A 1 9 VAL 9 ? ? ? A .
A 1 10 LEU 10 ? ? ? A .
A 1 11 LEU 11 ? ? ? A .
A 1 12 VAL 12 ? ? ? A .
A 1 13 ALA 13 ? ? ? A .
A 1 14 ILE 14 ? ? ? A .
A 1 15 SER 15 ? ? ? A .
A 1 16 SER 16 ? ? ? A .
A 1 17 ALA 17 ? ? ? A .
A 1 18 PHE 18 ? ? ? A .
A 1 19 GLU 19 ? ? ? A .
A 1 20 PHE 20 ? ? ? A .
A 1 21 GLY 21 ? ? ? A .
A 1 22 PRO 22 ? ? ? A .
A 1 23 VAL 23 ? ? ? A .
A 1 24 ALA 24 ? ? ? A .
A 1 25 GLY 25 ? ? ? A .
A 1 26 ARG 26 ? ? ? A .
A 1 27 ASP 27 ? ? ? A .
A 1 28 LEU 28 ? ? ? A .
A 1 29 ALA 29 ? ? ? A .
A 1 30 ILE 30 ? ? ? A .
A 1 31 ARG 31 ? ? ? A .
A 1 32 ASP 32 ? ? ? A .
A 1 33 ASN 33 ? ? ? A .
A 1 34 SER 34 ? ? ? A .
A 1 35 ILE 35 ? ? ? A .
A 1 36 TRP 36 ? ? ? A .
A 1 37 ASP 37 ? ? ? A .
A 1 38 GLN 38 ? ? ? A .
A 1 39 LYS 39 ? ? ? A .
A 1 40 GLU 40 ? ? ? A .
A 1 41 PRO 41 ? ? ? A .
A 1 42 ALA 42 ? ? ? A .
A 1 43 VAL 43 ? ? ? A .
A 1 44 ARG 44 ? ? ? A .
A 1 45 ASP 45 ? ? ? A .
A 1 46 ARG 46 ? ? ? A .
A 1 47 SER 47 ? ? ? A .
A 1 48 PHE 48 ? ? ? A .
A 1 49 GLN 49 ? ? ? A .
A 1 50 PHE 50 ? ? ? A .
A 1 51 VAL 51 ? ? ? A .
A 1 52 PRO 52 ? ? ? A .
A 1 53 SER 53 ? ? ? A .
A 1 54 VAL 54 ? ? ? A .
A 1 55 GLY 55 ? ? ? A .
A 1 56 ILE 56 ? ? ? A .
A 1 57 GLN 57 ? ? ? A .
A 1 58 ASN 58 ? ? ? A .
A 1 59 SER 59 ? ? ? A .
A 1 60 LYS 60 ? ? ? A .
A 1 61 SER 61 ? ? ? A .
A 1 62 LEU 62 ? ? ? A .
A 1 63 ASN 63 ? ? ? A .
A 1 64 LYS 64 ? ? ? A .
A 1 65 THR 65 ? ? ? A .
A 1 66 CYS 66 ? ? ? A .
A 1 67 CYS 67 ? ? ? A .
A 1 68 LEU 68 ? ? ? A .
A 1 69 ASN 69 ? ? ? A .
A 1 70 GLY 70 ? ? ? A .
A 1 71 GLY 71 ? ? ? A .
A 1 72 THR 72 ? ? ? A .
A 1 73 CYS 73 ? ? ? A .
A 1 74 ILE 74 ? ? ? A .
A 1 75 LEU 75 ? ? ? A .
A 1 76 GLY 76 ? ? ? A .
A 1 77 SER 77 ? ? ? A .
A 1 78 PHE 78 ? ? ? A .
A 1 79 CYS 79 ? ? ? A .
A 1 80 ALA 80 ? ? ? A .
A 1 81 CYS 81 ? ? ? A .
A 1 82 PRO 82 ? ? ? A .
A 1 83 PRO 83 ? ? ? A .
A 1 84 SER 84 ? ? ? A .
A 1 85 PHE 85 ? ? ? A .
A 1 86 TYR 86 ? ? ? A .
A 1 87 GLY 87 ? ? ? A .
A 1 88 ARG 88 ? ? ? A .
A 1 89 ASN 89 ? ? ? A .
A 1 90 CYS 90 ? ? ? A .
A 1 91 GLU 91 ? ? ? A .
A 1 92 HIS 92 ? ? ? A .
A 1 93 ASP 93 ? ? ? A .
A 1 94 VAL 94 ? ? ? A .
A 1 95 ARG 95 ? ? ? A .
A 1 96 LYS 96 96 LYS LYS A .
A 1 97 GLU 97 97 GLU GLU A .
A 1 98 HIS 98 98 HIS HIS A .
A 1 99 CYS 99 99 CYS CYS A .
A 1 100 GLY 100 100 GLY GLY A .
A 1 101 SER 101 101 SER SER A .
A 1 102 ILE 102 102 ILE ILE A .
A 1 103 LEU 103 103 LEU LEU A .
A 1 104 HIS 104 104 HIS HIS A .
A 1 105 GLY 105 105 GLY GLY A .
A 1 106 THR 106 106 THR THR A .
A 1 107 TRP 107 107 TRP TRP A .
A 1 108 LEU 108 108 LEU LEU A .
A 1 109 PRO 109 109 PRO PRO A .
A 1 110 LYS 110 110 LYS LYS A .
A 1 111 LYS 111 111 LYS LYS A .
A 1 112 CYS 112 112 CYS CYS A .
A 1 113 SER 113 113 SER SER A .
A 1 114 LEU 114 114 LEU LEU A .
A 1 115 CYS 115 115 CYS CYS A .
A 1 116 ARG 116 116 ARG ARG A .
A 1 117 CYS 117 117 CYS CYS A .
A 1 118 TRP 118 118 TRP TRP A .
A 1 119 HIS 119 119 HIS HIS A .
A 1 120 GLY 120 120 GLY GLY A .
A 1 121 GLN 121 121 GLN GLN A .
A 1 122 LEU 122 122 LEU LEU A .
A 1 123 HIS 123 123 HIS HIS A .
A 1 124 CYS 124 124 CYS CYS A .
A 1 125 LEU 125 125 LEU LEU A .
A 1 126 PRO 126 126 PRO PRO A .
A 1 127 GLN 127 127 GLN GLN A .
A 1 128 THR 128 128 THR THR A .
A 1 129 PHE 129 129 PHE PHE A .
A 1 130 LEU 130 130 LEU LEU A .
A 1 131 PRO 131 131 PRO PRO A .
A 1 132 GLY 132 132 GLY GLY A .
A 1 133 CYS 133 133 CYS CYS A .
A 1 134 ASP 134 134 ASP ASP A .
A 1 135 GLY 135 ? ? ? A .
A 1 136 HIS 136 ? ? ? A .
A 1 137 VAL 137 ? ? ? A .
A 1 138 MET 138 ? ? ? A .
A 1 139 ASP 139 ? ? ? A .
A 1 140 GLN 140 ? ? ? A .
A 1 141 ASP 141 ? ? ? A .
A 1 142 LEU 142 ? ? ? A .
A 1 143 LYS 143 ? ? ? A .
A 1 144 ALA 144 ? ? ? A .
A 1 145 SER 145 ? ? ? A .
A 1 146 GLY 146 ? ? ? A .
A 1 147 THR 147 ? ? ? A .
A 1 148 PRO 148 ? ? ? A .
A 1 149 CYS 149 ? ? ? A .
A 1 150 GLN 150 ? ? ? A .
A 1 151 THR 151 ? ? ? A .
A 1 152 PRO 152 ? ? ? A .
A 1 153 SER 153 ? ? ? A .
A 1 154 VAL 154 ? ? ? A .
A 1 155 THR 155 ? ? ? A .
A 1 156 THR 156 ? ? ? A .
A 1 157 THR 157 ? ? ? A .
A 1 158 PHE 158 ? ? ? A .
A 1 159 MET 159 ? ? ? A .
A 1 160 LEU 160 ? ? ? A .
A 1 161 ALA 161 ? ? ? A .
A 1 162 GLY 162 ? ? ? A .
A 1 163 ALA 163 ? ? ? A .
A 1 164 CYS 164 ? ? ? A .
A 1 165 LEU 165 ? ? ? A .
A 1 166 PHE 166 ? ? ? A .
A 1 167 LEU 167 ? ? ? A .
A 1 168 ASP 168 ? ? ? A .
A 1 169 MET 169 ? ? ? A .
A 1 170 LYS 170 ? ? ? A .
A 1 171 VAL 171 ? ? ? A .
#
#
loop_
_ma_data.id
_ma_data.name
_ma_data.content_type
_ma_data.content_type_other_details
1
'TERATOCARCINOMA-DERIVED GROWTH FACTOR {PDB ID=2j5h, label_asym_id=A, auth_asym_id=A, SMTL ID=2j5h.1.A}'
'template structure' .
2 . target .
3 'Target-template alignment by BLAST to 2j5h, label_asym_id=A'
'target-template alignment' .
4 'model 1' 'model coordinates' .
5 SMTL 'reference database' .
6 PDB 'reference database' .
7 'Template search output' other 'Results of the sequence search'
#
#
loop_
_ma_data_group.ordinal_id
_ma_data_group.group_id
_ma_data_group.data_id
1 1 2
2 1 5
3 1 6
4 2 7
5 3 2
6 3 1
7 3 3
8 4 1
9 4 3
10 5 4
#
#
loop_
_ma_data_ref_db.data_id
_ma_data_ref_db.name
_ma_data_ref_db.location_url
_ma_data_ref_db.version
_ma_data_ref_db.release_date
5 SMTL https://swissmodel.expasy.org/templates/ . 2024-12-18
6 PDB https://www.wwpdb.org . 2024-12-13
#
#
loop_
_ma_target_entity.entity_id
_ma_target_entity.data_id
_ma_target_entity.origin
1 2 'reference database'
#
#
loop_
_ma_target_entity_instance.asym_id
_ma_target_entity_instance.entity_id
_ma_target_entity_instance.details
A 1 .
#
#
loop_
_ma_template_trans_matrix.id
_ma_template_trans_matrix.rot_matrix[1][1]
_ma_template_trans_matrix.rot_matrix[2][1]
_ma_template_trans_matrix.rot_matrix[3][1]
_ma_template_trans_matrix.rot_matrix[1][2]
_ma_template_trans_matrix.rot_matrix[2][2]
_ma_template_trans_matrix.rot_matrix[3][2]
_ma_template_trans_matrix.rot_matrix[1][3]
_ma_template_trans_matrix.rot_matrix[2][3]
_ma_template_trans_matrix.rot_matrix[3][3]
_ma_template_trans_matrix.tr_vector[1]
_ma_template_trans_matrix.tr_vector[2]
_ma_template_trans_matrix.tr_vector[3]
1 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000
1.000000 0 0 0
#
#
loop_
_ma_template_details.ordinal_id
_ma_template_details.template_id
_ma_template_details.template_origin
_ma_template_details.template_entity_type
_ma_template_details.template_trans_matrix_id
_ma_template_details.template_data_id
_ma_template_details.target_asym_id
_ma_template_details.template_label_asym_id
_ma_template_details.template_label_entity_id
_ma_template_details.template_model_num
_ma_template_details.template_auth_asym_id
1 1 'reference database' polymer 1 1 A A 1 1 A
#
#
loop_
_ma_template_poly.template_id
_ma_template_poly.seq_one_letter_code
_ma_template_poly.seq_one_letter_code_can
1 (UNK)KEHCGSILHGTWLPKKCSLCRCWHGQLHCLPQTFLPGCD(UNK)
XKEHCGSILHGTWLPKKCSLCRCWHGQLHCLPQTFLPGCDX
#
#
loop_
_ma_template_poly_segment.id
_ma_template_poly_segment.template_id
_ma_template_poly_segment.residue_number_begin
_ma_template_poly_segment.residue_number_end
1 1 2 40
#
#
loop_
_ma_template_ref_db_details.template_id
_ma_template_ref_db_details.db_name
_ma_template_ref_db_details.db_name_other_details
_ma_template_ref_db_details.db_accession_code
_ma_template_ref_db_details.db_version_date
1 PDB . 2j5h 2024-10-16
#
#
loop_
_ma_target_template_poly_mapping.id
_ma_target_template_poly_mapping.template_segment_id
_ma_target_template_poly_mapping.target_asym_id
_ma_target_template_poly_mapping.target_seq_id_begin
_ma_target_template_poly_mapping.target_seq_id_end
1 1 A 1 171
#
#
loop_
_ma_alignment_info.alignment_id
_ma_alignment_info.data_id
_ma_alignment_info.software_group_id
_ma_alignment_info.alignment_length
_ma_alignment_info.alignment_type
_ma_alignment_info.alignment_mode
1 3 1 171 'target-template pairwise alignment' local
#
#
loop_
_ma_alignment_details.ordinal_id
_ma_alignment_details.alignment_id
_ma_alignment_details.template_segment_id
_ma_alignment_details.target_asym_id
_ma_alignment_details.score_type
_ma_alignment_details.score_type_other_details
_ma_alignment_details.score_value
_ma_alignment_details.percent_sequence_identity
_ma_alignment_details.sequence_identity_denominator
_ma_alignment_details.sequence_identity_denominator_other_details
1 1 1 A 'BLAST e-value' . 1.34e-21 100.000
'Number of aligned residue pairs (not including the gaps)' .
#
#
loop_
_ma_alignment.ordinal_id
_ma_alignment.alignment_id
_ma_alignment.target_template_flag
_ma_alignment.sequence
1 1 1
MGYFSSSVVLLVAISSAFEFGPVAGRDLAIRDNSIWDQKEPAVRDRSFQFVPSVGIQNSKSLNKTCCLNGGTCILGSFCACPPSFYGRNCEHDVRKEHCGSILHGTWLPKKCSLCRCWHGQLHCLPQTFLPGCDGHVMDQDLKASGTPCQTPSVTTTFMLAGACLFLDMKV
2 1 2
-----------------------------------------------------------------------------------------------KEHCGSILHGTWLPKKCSLCRCWHGQLHCLPQTFLPGCD-------------------------------------
#
#
loop_
_ma_protocol_step.ordinal_id
_ma_protocol_step.protocol_id
_ma_protocol_step.step_id
_ma_protocol_step.method_type
_ma_protocol_step.step_name
_ma_protocol_step.details
_ma_protocol_step.software_group_id
_ma_protocol_step.input_data_group_id
_ma_protocol_step.output_data_group_id
1 1 1 'template search' 'template search' 'SWISS-MODEL template search in PDB' 2
1 2
2 1 2 'template selection' 'template selection'
'Automatic template selection by SWISS-MODEL' 3 2 4
3 1 3 modeling 'homology modeling'
'SWISS-MODEL auto-model mode using ProMod3 on 2j5h.1' 4 3 5
#
#
loop_
_ma_model_list.ordinal_id
_ma_model_list.model_id
_ma_model_list.model_group_id
_ma_model_list.model_name
_ma_model_list.model_group_name
_ma_model_list.data_id
_ma_model_list.model_type
_ma_model_list.model_type_other_details
1 1 1 'model 1' . 4 'Homology model' .
#
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_alt_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.auth_seq_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.label_entity_id
_atom_site.auth_asym_id
_atom_site.auth_comp_id
_atom_site.B_iso_or_equiv
_atom_site.pdbx_PDB_model_num
ATOM 1 N N . LYS 96 96 ? A 13.745 11.599 -8.962 1 1 A LYS 0.390 1
ATOM 2 C CA . LYS 96 96 ? A 13.174 12.936 -8.569 1 1 A LYS 0.390 1
ATOM 3 C C . LYS 96 96 ? A 11.838 12.711 -7.913 1 1 A LYS 0.390 1
ATOM 4 O O . LYS 96 96 ? A 10.805 12.952 -8.518 1 1 A LYS 0.390 1
ATOM 5 C CB . LYS 96 96 ? A 13.052 13.883 -9.812 1 1 A LYS 0.390 1
ATOM 6 C CG . LYS 96 96 ? A 14.324 14.684 -10.184 1 1 A LYS 0.390 1
ATOM 7 C CD . LYS 96 96 ? A 15.528 13.850 -10.666 1 1 A LYS 0.390 1
ATOM 8 C CE . LYS 96 96 ? A 16.749 14.675 -11.119 1 1 A LYS 0.390 1
ATOM 9 N NZ . LYS 96 96 ? A 16.464 15.403 -12.377 1 1 A LYS 0.390 1
ATOM 10 N N . GLU 97 97 ? A 11.844 12.205 -6.670 1 1 A GLU 0.520 1
ATOM 11 C CA . GLU 97 97 ? A 10.640 11.796 -6.009 1 1 A GLU 0.520 1
ATOM 12 C C . GLU 97 97 ? A 10.912 11.967 -4.545 1 1 A GLU 0.520 1
ATOM 13 O O . GLU 97 97 ? A 12.070 11.994 -4.127 1 1 A GLU 0.520 1
ATOM 14 C CB . GLU 97 97 ? A 10.301 10.311 -6.298 1 1 A GLU 0.520 1
ATOM 15 C CG . GLU 97 97 ? A 11.393 9.287 -5.876 1 1 A GLU 0.520 1
ATOM 16 C CD . GLU 97 97 ? A 11.088 7.862 -6.340 1 1 A GLU 0.520 1
ATOM 17 O OE1 . GLU 97 97 ? A 11.851 6.960 -5.910 1 1 A GLU 0.520 1
ATOM 18 O OE2 . GLU 97 97 ? A 10.161 7.686 -7.166 1 1 A GLU 0.520 1
ATOM 19 N N . HIS 98 98 ? A 9.845 12.122 -3.753 1 1 A HIS 0.500 1
ATOM 20 C CA . HIS 98 98 ? A 9.929 12.272 -2.319 1 1 A HIS 0.500 1
ATOM 21 C C . HIS 98 98 ? A 8.938 11.338 -1.684 1 1 A HIS 0.500 1
ATOM 22 O O . HIS 98 98 ? A 8.540 11.548 -0.549 1 1 A HIS 0.500 1
ATOM 23 C CB . HIS 98 98 ? A 9.662 13.728 -1.878 1 1 A HIS 0.500 1
ATOM 24 C CG . HIS 98 98 ? A 10.753 14.622 -2.362 1 1 A HIS 0.500 1
ATOM 25 N ND1 . HIS 98 98 ? A 10.443 15.869 -2.867 1 1 A HIS 0.500 1
ATOM 26 C CD2 . HIS 98 98 ? A 12.097 14.437 -2.359 1 1 A HIS 0.500 1
ATOM 27 C CE1 . HIS 98 98 ? A 11.601 16.415 -3.161 1 1 A HIS 0.500 1
ATOM 28 N NE2 . HIS 98 98 ? A 12.641 15.592 -2.876 1 1 A HIS 0.500 1
ATOM 29 N N . CYS 99 99 ? A 8.507 10.283 -2.410 1 1 A CYS 0.510 1
ATOM 30 C CA . CYS 99 99 ? A 7.620 9.285 -1.862 1 1 A CYS 0.510 1
ATOM 31 C C . CYS 99 99 ? A 7.392 8.149 -2.844 1 1 A CYS 0.510 1
ATOM 32 O O . CYS 99 99 ? A 7.953 8.155 -3.930 1 1 A CYS 0.510 1
ATOM 33 C CB . CYS 99 99 ? A 6.245 9.837 -1.424 1 1 A CYS 0.510 1
ATOM 34 S SG . CYS 99 99 ? A 5.192 10.504 -2.737 1 1 A CYS 0.510 1
ATOM 35 N N . GLY 100 100 ? A 6.540 7.156 -2.473 1 1 A GLY 0.490 1
ATOM 36 C CA . GLY 100 100 ? A 6.000 6.155 -3.390 1 1 A GLY 0.490 1
ATOM 37 C C . GLY 100 100 ? A 4.887 6.646 -4.291 1 1 A GLY 0.490 1
ATOM 38 O O . GLY 100 100 ? A 4.990 7.653 -4.983 1 1 A GLY 0.490 1
ATOM 39 N N . SER 101 101 ? A 3.772 5.903 -4.346 1 1 A SER 0.500 1
ATOM 40 C CA . SER 101 101 ? A 2.828 6.047 -5.442 1 1 A SER 0.500 1
ATOM 41 C C . SER 101 101 ? A 1.558 5.288 -5.114 1 1 A SER 0.500 1
ATOM 42 O O . SER 101 101 ? A 1.141 5.279 -3.959 1 1 A SER 0.500 1
ATOM 43 C CB . SER 101 101 ? A 3.419 5.586 -6.815 1 1 A SER 0.500 1
ATOM 44 O OG . SER 101 101 ? A 3.833 4.218 -6.780 1 1 A SER 0.500 1
ATOM 45 N N . ILE 102 102 ? A 0.898 4.652 -6.110 1 1 A ILE 0.500 1
ATOM 46 C CA . ILE 102 102 ? A -0.369 3.944 -5.974 1 1 A ILE 0.500 1
ATOM 47 C C . ILE 102 102 ? A -0.175 2.604 -6.667 1 1 A ILE 0.500 1
ATOM 48 O O . ILE 102 102 ? A 0.645 2.494 -7.577 1 1 A ILE 0.500 1
ATOM 49 C CB . ILE 102 102 ? A -1.552 4.685 -6.625 1 1 A ILE 0.500 1
ATOM 50 C CG1 . ILE 102 102 ? A -1.607 6.186 -6.231 1 1 A ILE 0.500 1
ATOM 51 C CG2 . ILE 102 102 ? A -2.910 4.002 -6.323 1 1 A ILE 0.500 1
ATOM 52 C CD1 . ILE 102 102 ? A -1.847 6.464 -4.739 1 1 A ILE 0.500 1
ATOM 53 N N . LEU 103 103 ? A -0.904 1.548 -6.254 1 1 A LEU 0.500 1
ATOM 54 C CA . LEU 103 103 ? A -0.714 0.206 -6.757 1 1 A LEU 0.500 1
ATOM 55 C C . LEU 103 103 ? A -1.999 -0.555 -6.529 1 1 A LEU 0.500 1
ATOM 56 O O . LEU 103 103 ? A -2.968 -0.005 -6.029 1 1 A LEU 0.500 1
ATOM 57 C CB . LEU 103 103 ? A 0.484 -0.485 -6.057 1 1 A LEU 0.500 1
ATOM 58 C CG . LEU 103 103 ? A 1.049 -1.823 -6.591 1 1 A LEU 0.500 1
ATOM 59 C CD1 . LEU 103 103 ? A 2.502 -1.643 -7.056 1 1 A LEU 0.500 1
ATOM 60 C CD2 . LEU 103 103 ? A 0.973 -2.898 -5.492 1 1 A LEU 0.500 1
ATOM 61 N N . HIS 104 104 ? A -1.988 -1.834 -6.924 1 1 A HIS 0.500 1
ATOM 62 C CA . HIS 104 104 ? A -3.067 -2.785 -7.031 1 1 A HIS 0.500 1
ATOM 63 C C . HIS 104 104 ? A -2.412 -4.034 -7.596 1 1 A HIS 0.500 1
ATOM 64 O O . HIS 104 104 ? A -2.554 -4.425 -8.754 1 1 A HIS 0.500 1
ATOM 65 C CB . HIS 104 104 ? A -4.297 -2.336 -7.871 1 1 A HIS 0.500 1
ATOM 66 C CG . HIS 104 104 ? A -3.974 -1.616 -9.144 1 1 A HIS 0.500 1
ATOM 67 N ND1 . HIS 104 104 ? A -3.926 -0.235 -9.141 1 1 A HIS 0.500 1
ATOM 68 C CD2 . HIS 104 104 ? A -3.692 -2.087 -10.383 1 1 A HIS 0.500 1
ATOM 69 C CE1 . HIS 104 104 ? A -3.615 0.105 -10.365 1 1 A HIS 0.500 1
ATOM 70 N NE2 . HIS 104 104 ? A -3.460 -0.976 -11.168 1 1 A HIS 0.500 1
ATOM 71 N N . GLY 105 105 ? A -1.613 -4.690 -6.724 1 1 A GLY 0.490 1
ATOM 72 C CA . GLY 105 105 ? A -1.047 -6.024 -6.895 1 1 A GLY 0.490 1
ATOM 73 C C . GLY 105 105 ? A -2.126 -7.056 -6.760 1 1 A GLY 0.490 1
ATOM 74 O O . GLY 105 105 ? A -2.325 -7.620 -5.692 1 1 A GLY 0.490 1
ATOM 75 N N . THR 106 106 ? A -2.845 -7.250 -7.875 1 1 A THR 0.520 1
ATOM 76 C CA . THR 106 106 ? A -4.124 -7.945 -7.963 1 1 A THR 0.520 1
ATOM 77 C C . THR 106 106 ? A -4.335 -8.425 -9.367 1 1 A THR 0.520 1
ATOM 78 O O . THR 106 106 ? A -4.612 -9.595 -9.602 1 1 A THR 0.520 1
ATOM 79 C CB . THR 106 106 ? A -5.365 -7.089 -7.687 1 1 A THR 0.520 1
ATOM 80 O OG1 . THR 106 106 ? A -5.031 -5.739 -7.440 1 1 A THR 0.520 1
ATOM 81 C CG2 . THR 106 106 ? A -6.072 -7.667 -6.466 1 1 A THR 0.520 1
ATOM 82 N N . TRP 107 107 ? A -4.282 -7.468 -10.326 1 1 A TRP 0.510 1
ATOM 83 C CA . TRP 107 107 ? A -4.695 -7.622 -11.717 1 1 A TRP 0.510 1
ATOM 84 C C . TRP 107 107 ? A -6.114 -8.152 -11.933 1 1 A TRP 0.510 1
ATOM 85 O O . TRP 107 107 ? A -6.840 -8.572 -11.029 1 1 A TRP 0.510 1
ATOM 86 C CB . TRP 107 107 ? A -3.626 -8.249 -12.698 1 1 A TRP 0.510 1
ATOM 87 C CG . TRP 107 107 ? A -2.666 -9.270 -12.112 1 1 A TRP 0.510 1
ATOM 88 C CD1 . TRP 107 107 ? A -1.635 -8.988 -11.262 1 1 A TRP 0.510 1
ATOM 89 C CD2 . TRP 107 107 ? A -2.657 -10.716 -12.256 1 1 A TRP 0.510 1
ATOM 90 N NE1 . TRP 107 107 ? A -1.039 -10.141 -10.797 1 1 A TRP 0.510 1
ATOM 91 C CE2 . TRP 107 107 ? A -1.678 -11.207 -11.398 1 1 A TRP 0.510 1
ATOM 92 C CE3 . TRP 107 107 ? A -3.426 -11.579 -13.044 1 1 A TRP 0.510 1
ATOM 93 C CZ2 . TRP 107 107 ? A -1.452 -12.576 -11.250 1 1 A TRP 0.510 1
ATOM 94 C CZ3 . TRP 107 107 ? A -3.199 -12.962 -12.909 1 1 A TRP 0.510 1
ATOM 95 C CH2 . TRP 107 107 ? A -2.238 -13.453 -12.017 1 1 A TRP 0.510 1
ATOM 96 N N . LEU 108 108 ? A -6.568 -8.085 -13.202 1 1 A LEU 0.490 1
ATOM 97 C CA . LEU 108 108 ? A -7.918 -8.417 -13.615 1 1 A LEU 0.490 1
ATOM 98 C C . LEU 108 108 ? A -8.967 -7.507 -12.921 1 1 A LEU 0.490 1
ATOM 99 O O . LEU 108 108 ? A -8.550 -6.436 -12.477 1 1 A LEU 0.490 1
ATOM 100 C CB . LEU 108 108 ? A -8.116 -9.962 -13.486 1 1 A LEU 0.490 1
ATOM 101 C CG . LEU 108 108 ? A -6.944 -10.819 -14.009 1 1 A LEU 0.490 1
ATOM 102 C CD1 . LEU 108 108 ? A -7.164 -12.309 -13.702 1 1 A LEU 0.490 1
ATOM 103 C CD2 . LEU 108 108 ? A -6.694 -10.611 -15.512 1 1 A LEU 0.490 1
ATOM 104 N N . PRO 109 109 ? A -10.277 -7.734 -12.764 1 1 A PRO 0.420 1
ATOM 105 C CA . PRO 109 109 ? A -11.135 -6.734 -12.128 1 1 A PRO 0.420 1
ATOM 106 C C . PRO 109 109 ? A -11.113 -6.927 -10.619 1 1 A PRO 0.420 1
ATOM 107 O O . PRO 109 109 ? A -12.036 -7.506 -10.051 1 1 A PRO 0.420 1
ATOM 108 C CB . PRO 109 109 ? A -12.524 -7.002 -12.740 1 1 A PRO 0.420 1
ATOM 109 C CG . PRO 109 109 ? A -12.516 -8.489 -13.096 1 1 A PRO 0.420 1
ATOM 110 C CD . PRO 109 109 ? A -11.060 -8.752 -13.464 1 1 A PRO 0.420 1
ATOM 111 N N . LYS 110 110 ? A -10.036 -6.483 -9.945 1 1 A LYS 0.540 1
ATOM 112 C CA . LYS 110 110 ? A -9.866 -6.668 -8.519 1 1 A LYS 0.540 1
ATOM 113 C C . LYS 110 110 ? A -9.226 -5.434 -7.902 1 1 A LYS 0.540 1
ATOM 114 O O . LYS 110 110 ? A -8.497 -4.689 -8.549 1 1 A LYS 0.540 1
ATOM 115 C CB . LYS 110 110 ? A -8.973 -7.897 -8.215 1 1 A LYS 0.540 1
ATOM 116 C CG . LYS 110 110 ? A -9.502 -9.240 -8.739 1 1 A LYS 0.540 1
ATOM 117 C CD . LYS 110 110 ? A -8.510 -10.385 -8.464 1 1 A LYS 0.540 1
ATOM 118 C CE . LYS 110 110 ? A -9.003 -11.770 -8.886 1 1 A LYS 0.540 1
ATOM 119 N NZ . LYS 110 110 ? A -9.224 -11.774 -10.346 1 1 A LYS 0.540 1
ATOM 120 N N . LYS 111 111 ? A -9.492 -5.188 -6.605 1 1 A LYS 0.530 1
ATOM 121 C CA . LYS 111 111 ? A -9.115 -3.957 -5.933 1 1 A LYS 0.530 1
ATOM 122 C C . LYS 111 111 ? A -8.562 -4.295 -4.556 1 1 A LYS 0.530 1
ATOM 123 O O . LYS 111 111 ? A -9.211 -4.158 -3.522 1 1 A LYS 0.530 1
ATOM 124 C CB . LYS 111 111 ? A -10.311 -2.955 -5.863 1 1 A LYS 0.530 1
ATOM 125 C CG . LYS 111 111 ? A -11.602 -3.479 -5.195 1 1 A LYS 0.530 1
ATOM 126 C CD . LYS 111 111 ? A -11.997 -2.679 -3.937 1 1 A LYS 0.530 1
ATOM 127 C CE . LYS 111 111 ? A -13.110 -3.361 -3.132 1 1 A LYS 0.530 1
ATOM 128 N NZ . LYS 111 111 ? A -13.377 -2.621 -1.878 1 1 A LYS 0.530 1
ATOM 129 N N . CYS 112 112 ? A -7.322 -4.811 -4.519 1 1 A CYS 0.550 1
ATOM 130 C CA . CYS 112 112 ? A -6.688 -5.316 -3.321 1 1 A CYS 0.550 1
ATOM 131 C C . CYS 112 112 ? A -5.222 -4.967 -3.526 1 1 A CYS 0.550 1
ATOM 132 O O . CYS 112 112 ? A -4.794 -4.892 -4.671 1 1 A CYS 0.550 1
ATOM 133 C CB . CYS 112 112 ? A -6.906 -6.854 -3.112 1 1 A CYS 0.550 1
ATOM 134 S SG . CYS 112 112 ? A -8.484 -7.462 -3.822 1 1 A CYS 0.550 1
ATOM 135 N N . SER 113 113 ? A -4.451 -4.683 -2.452 1 1 A SER 0.520 1
ATOM 136 C CA . SER 113 113 ? A -3.043 -4.256 -2.503 1 1 A SER 0.520 1
ATOM 137 C C . SER 113 113 ? A -2.864 -2.797 -2.905 1 1 A SER 0.520 1
ATOM 138 O O . SER 113 113 ? A -3.580 -2.277 -3.749 1 1 A SER 0.520 1
ATOM 139 C CB . SER 113 113 ? A -2.062 -5.112 -3.356 1 1 A SER 0.520 1
ATOM 140 O OG . SER 113 113 ? A -1.962 -6.463 -2.930 1 1 A SER 0.520 1
ATOM 141 N N . LEU 114 114 ? A -1.896 -2.079 -2.289 1 1 A LEU 0.520 1
ATOM 142 C CA . LEU 114 114 ? A -1.789 -0.634 -2.428 1 1 A LEU 0.520 1
ATOM 143 C C . LEU 114 114 ? A -0.352 -0.191 -2.154 1 1 A LEU 0.520 1
ATOM 144 O O . LEU 114 114 ? A 0.579 -0.993 -2.121 1 1 A LEU 0.520 1
ATOM 145 C CB . LEU 114 114 ? A -2.792 0.100 -1.481 1 1 A LEU 0.520 1
ATOM 146 C CG . LEU 114 114 ? A -3.661 1.231 -2.107 1 1 A LEU 0.520 1
ATOM 147 C CD1 . LEU 114 114 ? A -2.893 2.462 -2.621 1 1 A LEU 0.520 1
ATOM 148 C CD2 . LEU 114 114 ? A -4.593 0.711 -3.209 1 1 A LEU 0.520 1
ATOM 149 N N . CYS 115 115 ? A -0.152 1.122 -1.959 1 1 A CYS 0.530 1
ATOM 150 C CA . CYS 115 115 ? A 1.080 1.754 -1.530 1 1 A CYS 0.530 1
ATOM 151 C C . CYS 115 115 ? A 0.688 2.924 -0.653 1 1 A CYS 0.530 1
ATOM 152 O O . CYS 115 115 ? A -0.483 3.126 -0.345 1 1 A CYS 0.530 1
ATOM 153 C CB . CYS 115 115 ? A 1.926 2.360 -2.685 1 1 A CYS 0.530 1
ATOM 154 S SG . CYS 115 115 ? A 2.401 1.208 -3.991 1 1 A CYS 0.530 1
ATOM 155 N N . ARG 116 116 ? A 1.661 3.745 -0.234 1 1 A ARG 0.540 1
ATOM 156 C CA . ARG 116 116 ? A 1.385 5.072 0.274 1 1 A ARG 0.540 1
ATOM 157 C C . ARG 116 116 ? A 2.402 5.994 -0.346 1 1 A ARG 0.540 1
ATOM 158 O O . ARG 116 116 ? A 3.335 5.569 -1.025 1 1 A ARG 0.540 1
ATOM 159 C CB . ARG 116 116 ? A 1.489 5.247 1.819 1 1 A ARG 0.540 1
ATOM 160 C CG . ARG 116 116 ? A 0.382 4.553 2.633 1 1 A ARG 0.540 1
ATOM 161 C CD . ARG 116 116 ? A 0.476 4.895 4.127 1 1 A ARG 0.540 1
ATOM 162 N NE . ARG 116 116 ? A -0.776 4.423 4.813 1 1 A ARG 0.540 1
ATOM 163 C CZ . ARG 116 116 ? A -0.922 3.226 5.396 1 1 A ARG 0.540 1
ATOM 164 N NH1 . ARG 116 116 ? A -0.009 2.274 5.290 1 1 A ARG 0.540 1
ATOM 165 N NH2 . ARG 116 116 ? A -2.011 2.958 6.113 1 1 A ARG 0.540 1
ATOM 166 N N . CYS 117 117 ? A 2.240 7.306 -0.109 1 1 A CYS 0.510 1
ATOM 167 C CA . CYS 117 117 ? A 3.253 8.277 -0.422 1 1 A CYS 0.510 1
ATOM 168 C C . CYS 117 117 ? A 3.651 8.947 0.895 1 1 A CYS 0.510 1
ATOM 169 O O . CYS 117 117 ? A 2.917 9.768 1.433 1 1 A CYS 0.510 1
ATOM 170 C CB . CYS 117 117 ? A 2.708 9.267 -1.510 1 1 A CYS 0.510 1
ATOM 171 S SG . CYS 117 117 ? A 3.514 10.895 -1.692 1 1 A CYS 0.510 1
ATOM 172 N N . TRP 118 118 ? A 4.844 8.606 1.443 1 1 A TRP 0.500 1
ATOM 173 C CA . TRP 118 118 ? A 5.439 9.269 2.590 1 1 A TRP 0.500 1
ATOM 174 C C . TRP 118 118 ? A 6.905 9.519 2.272 1 1 A TRP 0.500 1
ATOM 175 O O . TRP 118 118 ? A 7.463 8.850 1.406 1 1 A TRP 0.500 1
ATOM 176 C CB . TRP 118 118 ? A 5.328 8.386 3.869 1 1 A TRP 0.500 1
ATOM 177 C CG . TRP 118 118 ? A 4.554 8.958 5.031 1 1 A TRP 0.500 1
ATOM 178 C CD1 . TRP 118 118 ? A 4.464 10.250 5.468 1 1 A TRP 0.500 1
ATOM 179 C CD2 . TRP 118 118 ? A 3.781 8.173 5.969 1 1 A TRP 0.500 1
ATOM 180 N NE1 . TRP 118 118 ? A 3.687 10.332 6.606 1 1 A TRP 0.500 1
ATOM 181 C CE2 . TRP 118 118 ? A 3.266 9.054 6.914 1 1 A TRP 0.500 1
ATOM 182 C CE3 . TRP 118 118 ? A 3.531 6.797 6.038 1 1 A TRP 0.500 1
ATOM 183 C CZ2 . TRP 118 118 ? A 2.472 8.609 7.968 1 1 A TRP 0.500 1
ATOM 184 C CZ3 . TRP 118 118 ? A 2.730 6.341 7.101 1 1 A TRP 0.500 1
ATOM 185 C CH2 . TRP 118 118 ? A 2.210 7.231 8.048 1 1 A TRP 0.500 1
ATOM 186 N N . HIS 119 119 ? A 7.566 10.468 2.986 1 1 A HIS 0.500 1
ATOM 187 C CA . HIS 119 119 ? A 8.904 11.003 2.695 1 1 A HIS 0.500 1
ATOM 188 C C . HIS 119 119 ? A 10.068 10.013 2.794 1 1 A HIS 0.500 1
ATOM 189 O O . HIS 119 119 ? A 11.211 10.305 2.463 1 1 A HIS 0.500 1
ATOM 190 C CB . HIS 119 119 ? A 9.204 12.233 3.594 1 1 A HIS 0.500 1
ATOM 191 C CG . HIS 119 119 ? A 10.224 13.186 3.046 1 1 A HIS 0.500 1
ATOM 192 N ND1 . HIS 119 119 ? A 9.785 14.273 2.315 1 1 A HIS 0.500 1
ATOM 193 C CD2 . HIS 119 119 ? A 11.572 13.229 3.184 1 1 A HIS 0.500 1
ATOM 194 C CE1 . HIS 119 119 ? A 10.871 14.954 2.024 1 1 A HIS 0.500 1
ATOM 195 N NE2 . HIS 119 119 ? A 11.987 14.368 2.526 1 1 A HIS 0.500 1
ATOM 196 N N . GLY 120 120 ? A 9.783 8.790 3.266 1 1 A GLY 0.520 1
ATOM 197 C CA . GLY 120 120 ? A 10.765 7.730 3.428 1 1 A GLY 0.520 1
ATOM 198 C C . GLY 120 120 ? A 10.236 6.671 4.338 1 1 A GLY 0.520 1
ATOM 199 O O . GLY 120 120 ? A 10.962 6.077 5.122 1 1 A GLY 0.520 1
ATOM 200 N N . GLN 121 121 ? A 8.918 6.417 4.270 1 1 A GLN 0.530 1
ATOM 201 C CA . GLN 121 121 ? A 8.279 5.452 5.130 1 1 A GLN 0.530 1
ATOM 202 C C . GLN 121 121 ? A 7.155 4.827 4.343 1 1 A GLN 0.530 1
ATOM 203 O O . GLN 121 121 ? A 6.411 5.545 3.690 1 1 A GLN 0.530 1
ATOM 204 C CB . GLN 121 121 ? A 7.710 6.149 6.391 1 1 A GLN 0.530 1
ATOM 205 C CG . GLN 121 121 ? A 7.249 5.177 7.498 1 1 A GLN 0.530 1
ATOM 206 C CD . GLN 121 121 ? A 6.763 5.930 8.736 1 1 A GLN 0.530 1
ATOM 207 O OE1 . GLN 121 121 ? A 5.588 5.897 9.086 1 1 A GLN 0.530 1
ATOM 208 N NE2 . GLN 121 121 ? A 7.700 6.612 9.434 1 1 A GLN 0.530 1
ATOM 209 N N . LEU 122 122 ? A 7.029 3.484 4.354 1 1 A LEU 0.520 1
ATOM 210 C CA . LEU 122 122 ? A 6.050 2.747 3.564 1 1 A LEU 0.520 1
ATOM 211 C C . LEU 122 122 ? A 6.225 2.919 2.049 1 1 A LEU 0.520 1
ATOM 212 O O . LEU 122 122 ? A 5.766 3.884 1.442 1 1 A LEU 0.520 1
ATOM 213 C CB . LEU 122 122 ? A 4.582 2.987 4.043 1 1 A LEU 0.520 1
ATOM 214 C CG . LEU 122 122 ? A 3.487 1.958 3.624 1 1 A LEU 0.520 1
ATOM 215 C CD1 . LEU 122 122 ? A 3.191 1.906 2.121 1 1 A LEU 0.520 1
ATOM 216 C CD2 . LEU 122 122 ? A 3.743 0.534 4.133 1 1 A LEU 0.520 1
ATOM 217 N N . HIS 123 123 ? A 6.861 1.935 1.375 1 1 A HIS 0.550 1
ATOM 218 C CA . HIS 123 123 ? A 6.888 1.893 -0.078 1 1 A HIS 0.550 1
ATOM 219 C C . HIS 123 123 ? A 5.572 1.364 -0.621 1 1 A HIS 0.550 1
ATOM 220 O O . HIS 123 123 ? A 4.649 2.132 -0.870 1 1 A HIS 0.550 1
ATOM 221 C CB . HIS 123 123 ? A 8.070 1.063 -0.619 1 1 A HIS 0.550 1
ATOM 222 C CG . HIS 123 123 ? A 9.348 1.825 -0.549 1 1 A HIS 0.550 1
ATOM 223 N ND1 . HIS 123 123 ? A 10.404 1.314 0.173 1 1 A HIS 0.550 1
ATOM 224 C CD2 . HIS 123 123 ? A 9.714 2.966 -1.184 1 1 A HIS 0.550 1
ATOM 225 C CE1 . HIS 123 123 ? A 11.396 2.153 -0.038 1 1 A HIS 0.550 1
ATOM 226 N NE2 . HIS 123 123 ? A 11.034 3.175 -0.854 1 1 A HIS 0.550 1
ATOM 227 N N . CYS 124 124 ? A 5.435 0.038 -0.817 1 1 A CYS 0.540 1
ATOM 228 C CA . CYS 124 124 ? A 4.225 -0.518 -1.395 1 1 A CYS 0.540 1
ATOM 229 C C . CYS 124 124 ? A 3.870 -1.829 -0.730 1 1 A CYS 0.540 1
ATOM 230 O O . CYS 124 124 ? A 4.666 -2.763 -0.754 1 1 A CYS 0.540 1
ATOM 231 C CB . CYS 124 124 ? A 4.411 -0.740 -2.914 1 1 A CYS 0.540 1
ATOM 232 S SG . CYS 124 124 ? A 4.381 0.825 -3.836 1 1 A CYS 0.540 1
ATOM 233 N N . LEU 125 125 ? A 2.668 -1.936 -0.120 1 1 A LEU 0.540 1
ATOM 234 C CA . LEU 125 125 ? A 2.237 -3.109 0.618 1 1 A LEU 0.540 1
ATOM 235 C C . LEU 125 125 ? A 0.712 -3.126 0.659 1 1 A LEU 0.540 1
ATOM 236 O O . LEU 125 125 ? A 0.104 -2.064 0.535 1 1 A LEU 0.540 1
ATOM 237 C CB . LEU 125 125 ? A 2.723 -3.093 2.101 1 1 A LEU 0.540 1
ATOM 238 C CG . LEU 125 125 ? A 4.197 -3.486 2.335 1 1 A LEU 0.540 1
ATOM 239 C CD1 . LEU 125 125 ? A 4.553 -3.351 3.824 1 1 A LEU 0.540 1
ATOM 240 C CD2 . LEU 125 125 ? A 4.509 -4.913 1.848 1 1 A LEU 0.540 1
ATOM 241 N N . PRO 126 126 ? A 0.023 -4.255 0.851 1 1 A PRO 0.550 1
ATOM 242 C CA . PRO 126 126 ? A -1.418 -4.258 1.071 1 1 A PRO 0.550 1
ATOM 243 C C . PRO 126 126 ? A -1.781 -3.781 2.460 1 1 A PRO 0.550 1
ATOM 244 O O . PRO 126 126 ? A -2.469 -2.777 2.576 1 1 A PRO 0.550 1
ATOM 245 C CB . PRO 126 126 ? A -1.833 -5.729 0.862 1 1 A PRO 0.550 1
ATOM 246 C CG . PRO 126 126 ? A -0.562 -6.556 1.111 1 1 A PRO 0.550 1
ATOM 247 C CD . PRO 126 126 ? A 0.581 -5.606 0.743 1 1 A PRO 0.550 1
ATOM 248 N N . GLN 127 127 ? A -1.329 -4.476 3.522 1 1 A GLN 0.550 1
ATOM 249 C CA . GLN 127 127 ? A -1.575 -4.103 4.905 1 1 A GLN 0.550 1
ATOM 250 C C . GLN 127 127 ? A -3.043 -4.191 5.322 1 1 A GLN 0.550 1
ATOM 251 O O . GLN 127 127 ? A -3.678 -3.226 5.729 1 1 A GLN 0.550 1
ATOM 252 C CB . GLN 127 127 ? A -0.902 -2.750 5.265 1 1 A GLN 0.550 1
ATOM 253 C CG . GLN 127 127 ? A -0.874 -2.414 6.772 1 1 A GLN 0.550 1
ATOM 254 C CD . GLN 127 127 ? A -0.126 -1.104 7.010 1 1 A GLN 0.550 1
ATOM 255 O OE1 . GLN 127 127 ? A -0.546 -0.018 6.609 1 1 A GLN 0.550 1
ATOM 256 N NE2 . GLN 127 127 ? A 1.043 -1.200 7.688 1 1 A GLN 0.550 1
ATOM 257 N N . THR 128 128 ? A -3.623 -5.403 5.185 1 1 A THR 0.570 1
ATOM 258 C CA . THR 128 128 ? A -5.014 -5.739 5.507 1 1 A THR 0.570 1
ATOM 259 C C . THR 128 128 ? A -6.057 -4.968 4.694 1 1 A THR 0.570 1
ATOM 260 O O . THR 128 128 ? A -7.231 -4.865 5.031 1 1 A THR 0.570 1
ATOM 261 C CB . THR 128 128 ? A -5.299 -5.856 7.019 1 1 A THR 0.570 1
ATOM 262 O OG1 . THR 128 128 ? A -6.059 -7.018 7.307 1 1 A THR 0.570 1
ATOM 263 C CG2 . THR 128 128 ? A -6.025 -4.668 7.676 1 1 A THR 0.570 1
ATOM 264 N N . PHE 129 129 ? A -5.646 -4.454 3.511 1 1 A PHE 0.530 1
ATOM 265 C CA . PHE 129 129 ? A -6.422 -3.581 2.641 1 1 A PHE 0.530 1
ATOM 266 C C . PHE 129 129 ? A -7.768 -4.177 2.245 1 1 A PHE 0.530 1
ATOM 267 O O . PHE 129 129 ? A -8.791 -3.497 2.214 1 1 A PHE 0.530 1
ATOM 268 C CB . PHE 129 129 ? A -5.554 -3.245 1.389 1 1 A PHE 0.530 1
ATOM 269 C CG . PHE 129 129 ? A -6.210 -2.287 0.433 1 1 A PHE 0.530 1
ATOM 270 C CD1 . PHE 129 129 ? A -7.077 -2.774 -0.555 1 1 A PHE 0.530 1
ATOM 271 C CD2 . PHE 129 129 ? A -5.986 -0.904 0.518 1 1 A PHE 0.530 1
ATOM 272 C CE1 . PHE 129 129 ? A -7.720 -1.901 -1.437 1 1 A PHE 0.530 1
ATOM 273 C CE2 . PHE 129 129 ? A -6.634 -0.024 -0.360 1 1 A PHE 0.530 1
ATOM 274 C CZ . PHE 129 129 ? A -7.500 -0.524 -1.340 1 1 A PHE 0.530 1
ATOM 275 N N . LEU 130 130 ? A -7.797 -5.488 1.958 1 1 A LEU 0.580 1
ATOM 276 C CA . LEU 130 130 ? A -9.057 -6.172 1.831 1 1 A LEU 0.580 1
ATOM 277 C C . LEU 130 130 ? A -8.914 -7.597 2.355 1 1 A LEU 0.580 1
ATOM 278 O O . LEU 130 130 ? A -8.359 -8.421 1.630 1 1 A LEU 0.580 1
ATOM 279 C CB . LEU 130 130 ? A -9.499 -6.165 0.347 1 1 A LEU 0.580 1
ATOM 280 C CG . LEU 130 130 ? A -10.952 -6.612 0.098 1 1 A LEU 0.580 1
ATOM 281 C CD1 . LEU 130 130 ? A -11.963 -5.606 0.674 1 1 A LEU 0.580 1
ATOM 282 C CD2 . LEU 130 130 ? A -11.192 -6.801 -1.406 1 1 A LEU 0.580 1
ATOM 283 N N . PRO 131 131 ? A -9.361 -7.985 3.553 1 1 A PRO 0.540 1
ATOM 284 C CA . PRO 131 131 ? A -9.120 -9.326 4.089 1 1 A PRO 0.540 1
ATOM 285 C C . PRO 131 131 ? A -10.037 -10.356 3.445 1 1 A PRO 0.540 1
ATOM 286 O O . PRO 131 131 ? A -11.050 -10.758 4.011 1 1 A PRO 0.540 1
ATOM 287 C CB . PRO 131 131 ? A -9.363 -9.169 5.602 1 1 A PRO 0.540 1
ATOM 288 C CG . PRO 131 131 ? A -10.327 -7.985 5.712 1 1 A PRO 0.540 1
ATOM 289 C CD . PRO 131 131 ? A -9.866 -7.074 4.578 1 1 A PRO 0.540 1
ATOM 290 N N . GLY 132 132 ? A -9.673 -10.785 2.229 1 1 A GLY 0.510 1
ATOM 291 C CA . GLY 132 132 ? A -10.460 -11.675 1.397 1 1 A GLY 0.510 1
ATOM 292 C C . GLY 132 132 ? A -9.860 -11.815 0.027 1 1 A GLY 0.510 1
ATOM 293 O O . GLY 132 132 ? A -10.494 -12.351 -0.876 1 1 A GLY 0.510 1
ATOM 294 N N . CYS 133 133 ? A -8.637 -11.290 -0.182 1 1 A CYS 0.540 1
ATOM 295 C CA . CYS 133 133 ? A -8.091 -11.074 -1.502 1 1 A CYS 0.540 1
ATOM 296 C C . CYS 133 133 ? A -6.631 -10.696 -1.325 1 1 A CYS 0.540 1
ATOM 297 O O . CYS 133 133 ? A -6.272 -9.528 -1.473 1 1 A CYS 0.540 1
ATOM 298 C CB . CYS 133 133 ? A -8.848 -9.901 -2.182 1 1 A CYS 0.540 1
ATOM 299 S SG . CYS 133 133 ? A -8.312 -9.475 -3.867 1 1 A CYS 0.540 1
ATOM 300 N N . ASP 134 134 ? A -5.808 -11.694 -0.947 1 1 A ASP 0.530 1
ATOM 301 C CA . ASP 134 134 ? A -4.433 -11.530 -0.523 1 1 A ASP 0.530 1
ATOM 302 C C . ASP 134 134 ? A -4.258 -10.681 0.787 1 1 A ASP 0.530 1
ATOM 303 O O . ASP 134 134 ? A -5.285 -10.343 1.445 1 1 A ASP 0.530 1
ATOM 304 C CB . ASP 134 134 ? A -3.517 -11.136 -1.720 1 1 A ASP 0.530 1
ATOM 305 C CG . ASP 134 134 ? A -3.657 -12.145 -2.852 1 1 A ASP 0.530 1
ATOM 306 O OD1 . ASP 134 134 ? A -3.131 -13.280 -2.695 1 1 A ASP 0.530 1
ATOM 307 O OD2 . ASP 134 134 ? A -4.291 -11.810 -3.890 1 1 A ASP 0.530 1
ATOM 308 O OXT . ASP 134 134 ? A -3.087 -10.429 1.191 1 1 A ASP 0.530 1
#
#
loop_
_atom_type.symbol
C
N
O
S
#
#
loop_
_ma_qa_metric.id
_ma_qa_metric.name
_ma_qa_metric.description
_ma_qa_metric.type
_ma_qa_metric.mode
_ma_qa_metric.type_other_details
_ma_qa_metric.software_group_id
1 QMEANDisCo 'Predicted accuracy according to all-atom lDDT in [0,1].'
'pLDDT all-atom in [0,1]' local . 5
2 QMEANDisCo 'Predicted accuracy according to all-atom lDDT in [0,1].'
'pLDDT all-atom in [0,1]' global . 5
3 GMQE
'Global Model Quality Estimate of the model accuracy, calculated by SWISS-MODEL.'
'normalized score' global . 6
#
#
loop_
_ma_qa_metric_global.ordinal_id
_ma_qa_metric_global.model_id
_ma_qa_metric_global.metric_id
_ma_qa_metric_global.metric_value
1 1 2 0.517
2 1 3 0.138
#
#
loop_
_ma_qa_metric_local.ordinal_id
_ma_qa_metric_local.model_id
_ma_qa_metric_local.label_asym_id
_ma_qa_metric_local.label_seq_id
_ma_qa_metric_local.label_comp_id
_ma_qa_metric_local.metric_id
_ma_qa_metric_local.metric_value
1 1 A 96 LYS 1 0.390
2 1 A 97 GLU 1 0.520
3 1 A 98 HIS 1 0.500
4 1 A 99 CYS 1 0.510
5 1 A 100 GLY 1 0.490
6 1 A 101 SER 1 0.500
7 1 A 102 ILE 1 0.500
8 1 A 103 LEU 1 0.500
9 1 A 104 HIS 1 0.500
10 1 A 105 GLY 1 0.490
11 1 A 106 THR 1 0.520
12 1 A 107 TRP 1 0.510
13 1 A 108 LEU 1 0.490
14 1 A 109 PRO 1 0.420
15 1 A 110 LYS 1 0.540
16 1 A 111 LYS 1 0.530
17 1 A 112 CYS 1 0.550
18 1 A 113 SER 1 0.520
19 1 A 114 LEU 1 0.520
20 1 A 115 CYS 1 0.530
21 1 A 116 ARG 1 0.540
22 1 A 117 CYS 1 0.510
23 1 A 118 TRP 1 0.500
24 1 A 119 HIS 1 0.500
25 1 A 120 GLY 1 0.520
26 1 A 121 GLN 1 0.530
27 1 A 122 LEU 1 0.520
28 1 A 123 HIS 1 0.550
29 1 A 124 CYS 1 0.540
30 1 A 125 LEU 1 0.540
31 1 A 126 PRO 1 0.550
32 1 A 127 GLN 1 0.550
33 1 A 128 THR 1 0.570
34 1 A 129 PHE 1 0.530
35 1 A 130 LEU 1 0.580
36 1 A 131 PRO 1 0.540
37 1 A 132 GLY 1 0.510
38 1 A 133 CYS 1 0.540
39 1 A 134 ASP 1 0.530
#
#
loop_
_pdbx_data_usage.id
_pdbx_data_usage.type
_pdbx_data_usage.details
_pdbx_data_usage.url
1 license
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