data_SMR-265f689c53907e19309a387837ac6d4c_2
_entry.id SMR-265f689c53907e19309a387837ac6d4c_2
_struct.entry_id SMR-265f689c53907e19309a387837ac6d4c_2
_struct.pdbx_model_details
;This model was generated unsupervised by the SWISS-MODEL homology-modelling pipeline for the SWISS-MODEL Repository, a database of annotated 3D protein structure models. The modelled monomer covers following UniProtKB entries:

  - P51865/ TDGF1_MOUSE, Teratocarcinoma-derived growth factor

Estimated model accuracy of this model is 0.07, calculated by SWISS-MODEL as Global Model Quality Estimate (GMQE).
;
_struct.pdbx_structure_determination_methodology computational
_struct.title 'Model for UniProtKB entries P51865'
_audit_conform.dict_location https://raw.githubusercontent.com/ihmwg/ModelCIF/d18ba38/base/mmcif_ma-core.dic
_audit_conform.dict_name mmcif_ma.dic
_audit_conform.dict_version 1.4.6
#
loop_
_citation.id
_citation.title
_citation.journal_abbrev
_citation.journal_volume
_citation.page_first
_citation.page_last
_citation.year
_citation.pdbx_database_id_PubMed
_citation.pdbx_database_id_DOI
primary 'The SWISS-MODEL Repository - new features and functionality'
'Nucleic Acids Res.' 45 D313 D319 2017 27899672 10.1093/nar/gkw1132
2 'SWISS-MODEL: homology modelling of protein structures and complexes'
'Nucleic Acids Res.' 46 W296 W303 2018 29788355 10.1093/nar/gky427
3 'ProMod3 - A versatile homology modelling toolbox' 'PLoS Comput. Biol.' 17(1)
1 18 2021 33507980 10.1371/journal.pcbi.1008667
4 'QMEANDisCo - distance constraints applied on model quality estimation'
Bioinformatics 36 1765 1771 2020 31697312 10.1093/bioinformatics/btz828
5
'OpenStructure: an integrated software framework for computational structural biology'
'Acta Crystallogr., Sect. D: Biol. Crystallogr.' 69 701 709 2013 23633579
10.1107/S0907444913007051
6 'BLAST+: architecture and applications' 'BMC Bioinf.' 10 421 . 2009 20003500
10.1186/1471-2105-10-421
7 'HH-suite3 for fast remote homology detection and deep protein annotation'
'BMC Bioinf.' 20 473 . 2019 31521110 10.1186/s12859-019-3019-7
#
#
loop_
_citation_author.citation_id
_citation_author.name
_citation_author.ordinal
primary 'Bienert, S.' 1
primary 'Waterhouse, A.' 2
primary 'de Beer, T.A.P.' 3
primary 'Tauriello, G.' 4
primary 'Studer, G.' 5
primary 'Bordoli, L.' 6
primary 'Schwede, T.' 7
2 'Waterhouse, A.' 8
2 'Bertoni, M.' 9
2 'Bienert, S.' 10
2 'Studer, G.' 11
2 'Tauriello, G.' 12
2 'Gumienny, R.' 13
2 'Heer, F.T.' 14
2 'de Beer, T.A.P.' 15
2 'Rempfer, C.' 16
2 'Bordoli, L.' 17
2 'Lepore, R.' 18
2 'Schwede, T.' 19
3 'Studer, G.' 20
3 'Tauriello, G.' 21
3 'Bienert, S.' 22
3 'Biasini, M.' 23
3 'Johner, N.' 24
3 'Schwede, T.' 25
4 'Studer, G.' 26
4 'Rempfer, C.' 27
4 'Waterhouse, A.M.' 28
4 'Gumienny, R.' 29
4 'Haas, J.' 30
4 'Schwede, T.' 31
5 'Biasini, M.' 32
5 'Schmidt, T.' 33
5 'Bienert, S.' 34
5 'Mariani, V.' 35
5 'Studer, G.' 36
5 'Haas, J.' 37
5 'Johner, N.' 38
5 'Schenk, A.D.' 39
5 'Philippsen, A.' 40
5 'Schwede, T.' 41
6 'Camacho, C.' 42
6 'Coulouris, G.' 43
6 'Avagyan, V.' 44
6 'Ma, N.' 45
6 'Papadopoulos, J.' 46
6 'Bealer, K.' 47
6 'Madden, T.L.' 48
7 'Steinegger, M.' 49
7 'Meier, M.' 50
7 'Mirdita, M.' 51
7 'Vohringer, H.' 52
7 'Haunsberger, S.J.' 53
7 'Soding, J.' 54
#
#
loop_
_software.pdbx_ordinal
_software.name
_software.classification
_software.description
_software.version
_software.type
_software.location
_software.citation_id
1 SWISS-MODEL 'model building' 'Homology modelling web service' 2024-10.3
package https://swissmodel.expasy.org 2
2 ProMod3 'model building' 'Modular homology modelling engine' 3.4.1 library
https://git.scicore.unibas.ch/schwede/ProMod3 3
3 QMEAN 'model building' 'QMEAN - Qualitative Model Energy ANalysis' 4.3.1
library https://git.scicore.unibas.ch/schwede/QMEAN 4
4 OpenStructure 'data processing'
'Open-Source Computational Structural Biology Framework' 2.8.0 package
https://openstructure.org/ 5
5 BLAST 'data collection' . 2.2.31 package https://blast.ncbi.nlm.nih.gov 6
6 HH-suite 'data collection' 'HH-suite3 for sensitive sequence searching' 3.2.0
package https://github.com/soedinglab/hh-suite 7
#
#
loop_
_ma_software_group.ordinal_id
_ma_software_group.group_id
_ma_software_group.software_id
_ma_software_group.parameter_group_id
1 1 6 .
2 2 1 .
3 2 4 .
4 2 5 .
5 2 6 .
6 3 1 .
7 3 4 .
8 4 1 .
9 4 2 .
10 4 4 .
11 5 3 .
12 6 1 .
13 6 3 .
14 6 4 .
#
#
loop_
_audit_author.name
_audit_author.pdbx_ordinal
'Bienert, S.' 1
'Waterhouse, A.' 2
'de Beer, T.A.P.' 3
'Tauriello, G.' 4
'Studer, G.' 5
'Bordoli, L.' 6
'Schwede, T.' 7
#
#
loop_
_chem_comp.id
_chem_comp.type
_chem_comp.name
_chem_comp.formula
_chem_comp.formula_weight
_chem_comp.ma_provenance
ALA 'L-peptide linking' ALANINE 'C3 H7 N O2' 89.094 'CCD Core'
ARG 'L-peptide linking' ARGININE 'C6 H15 N4 O2 1' 175.212 'CCD Core'
ASN 'L-peptide linking' ASPARAGINE 'C4 H8 N2 O3' 132.119 'CCD Core'
ASP 'L-peptide linking' 'ASPARTIC ACID' 'C4 H7 N O4' 133.103 'CCD Core'
CYS 'L-peptide linking' CYSTEINE 'C3 H7 N O2 S' 121.154 'CCD Core'
GLN 'L-peptide linking' GLUTAMINE 'C5 H10 N2 O3' 146.146 'CCD Core'
GLU 'L-peptide linking' 'GLUTAMIC ACID' 'C5 H9 N O4' 147.130 'CCD Core'
GLY 'peptide linking' GLYCINE 'C2 H5 N O2' 75.067 'CCD Core'
HIS 'L-peptide linking' HISTIDINE 'C6 H10 N3 O2 1' 156.165 'CCD Core'
ILE 'L-peptide linking' ISOLEUCINE 'C6 H13 N O2' 131.175 'CCD Core'
LEU 'L-peptide linking' LEUCINE 'C6 H13 N O2' 131.175 'CCD Core'
LYS 'L-peptide linking' LYSINE 'C6 H15 N2 O2 1' 147.198 'CCD Core'
MET 'L-peptide linking' METHIONINE 'C5 H11 N O2 S' 149.208 'CCD Core'
PHE 'L-peptide linking' PHENYLALANINE 'C9 H11 N O2' 165.192 'CCD Core'
PRO 'L-peptide linking' PROLINE 'C5 H9 N O2' 115.132 'CCD Core'
SER 'L-peptide linking' SERINE 'C3 H7 N O3' 105.093 'CCD Core'
THR 'L-peptide linking' THREONINE 'C4 H9 N O3' 119.120 'CCD Core'
TRP 'L-peptide linking' TRYPTOPHAN 'C11 H12 N2 O2' 204.229 'CCD Core'
TYR 'L-peptide linking' TYROSINE 'C9 H11 N O3' 181.191 'CCD Core'
VAL 'L-peptide linking' VALINE 'C5 H11 N O2' 117.148 'CCD Core'
#
#
loop_
_entity.id
_entity.type
_entity.src_method
_entity.pdbx_description
_entity.formula_weight
_entity.pdbx_number_of_molecules
_entity.details
1 polymer man . 21738.316 1 .
#
#
loop_
_struct_ref.id
_struct_ref.entity_id
_struct_ref.db_name
_struct_ref.db_code
_struct_ref.pdbx_db_accession
_struct_ref.pdbx_align_begin
_struct_ref.pdbx_seq_one_letter_code
_struct_ref.details
1 1 UNP TDGF1_MOUSE P51865 1
;MGYFSSSVVLLVAISSAFEFGPVAGRDLAIRDNSIWDQKEPAVRDRSFQFVPSVGIQNSKSLNKTCCLNG
GTCILGSFCACPPSFYGRNCEHDVRKEHCGSILHGTWLPKKCSLCRCWHGQLHCLPQTFLPGCDGHVMDQ
DLKASGTPCQTPSVTTTFMLAGACLFLDMKV
;
'Teratocarcinoma-derived growth factor'
#
#
loop_
_struct_ref_seq.align_id
_struct_ref_seq.ref_id
_struct_ref_seq.seq_align_beg
_struct_ref_seq.seq_align_end
_struct_ref_seq.db_align_beg
_struct_ref_seq.db_align_end
1 1 1 171 1 171
#
#
loop_
_ma_target_ref_db_details.target_entity_id
_ma_target_ref_db_details.db_name
_ma_target_ref_db_details.db_name_other_details
_ma_target_ref_db_details.db_code
_ma_target_ref_db_details.db_accession
_ma_target_ref_db_details.seq_db_isoform
_ma_target_ref_db_details.seq_db_align_begin
_ma_target_ref_db_details.seq_db_align_end
_ma_target_ref_db_details.ncbi_taxonomy_id
_ma_target_ref_db_details.organism_scientific
_ma_target_ref_db_details.seq_db_sequence_version_date
_ma_target_ref_db_details.seq_db_sequence_checksum
1 UNP . TDGF1_MOUSE P51865 . 1 171 10090 'Mus musculus (Mouse)' 2023-11-08
C53400EBACDB5380
#
#
loop_
_entity_poly.entity_id
_entity_poly.type
_entity_poly.nstd_linkage
_entity_poly.nstd_monomer
_entity_poly.pdbx_strand_id
_entity_poly.pdbx_seq_one_letter_code
_entity_poly.pdbx_seq_one_letter_code_can
1 polypeptide(L) no no A
;MGYFSSSVVLLVAISSAFEFGPVAGRDLAIRDNSIWDQKEPAVRDRSFQFVPSVGIQNSKSLNKTCCLNG
GTCILGSFCACPPSFYGRNCEHDVRKEHCGSILHGTWLPKKCSLCRCWHGQLHCLPQTFLPGCDGHVMDQ
DLKASGTPCQTPSVTTTFMLAGACLFLDMKV
;

;MGYFSSSVVLLVAISSAFEFGPVAGRDLAIRDNSIWDQKEPAVRDRSFQFVPSVGIQNSKSLNKTCCLNG
GTCILGSFCACPPSFYGRNCEHDVRKEHCGSILHGTWLPKKCSLCRCWHGQLHCLPQTFLPGCDGHVMDQ
DLKASGTPCQTPSVTTTFMLAGACLFLDMKV
;

#
#
loop_
_entity_poly_seq.entity_id
_entity_poly_seq.num
_entity_poly_seq.mon_id
_entity_poly_seq.hetero
1 1 MET .
1 2 GLY .
1 3 TYR .
1 4 PHE .
1 5 SER .
1 6 SER .
1 7 SER .
1 8 VAL .
1 9 VAL .
1 10 LEU .
1 11 LEU .
1 12 VAL .
1 13 ALA .
1 14 ILE .
1 15 SER .
1 16 SER .
1 17 ALA .
1 18 PHE .
1 19 GLU .
1 20 PHE .
1 21 GLY .
1 22 PRO .
1 23 VAL .
1 24 ALA .
1 25 GLY .
1 26 ARG .
1 27 ASP .
1 28 LEU .
1 29 ALA .
1 30 ILE .
1 31 ARG .
1 32 ASP .
1 33 ASN .
1 34 SER .
1 35 ILE .
1 36 TRP .
1 37 ASP .
1 38 GLN .
1 39 LYS .
1 40 GLU .
1 41 PRO .
1 42 ALA .
1 43 VAL .
1 44 ARG .
1 45 ASP .
1 46 ARG .
1 47 SER .
1 48 PHE .
1 49 GLN .
1 50 PHE .
1 51 VAL .
1 52 PRO .
1 53 SER .
1 54 VAL .
1 55 GLY .
1 56 ILE .
1 57 GLN .
1 58 ASN .
1 59 SER .
1 60 LYS .
1 61 SER .
1 62 LEU .
1 63 ASN .
1 64 LYS .
1 65 THR .
1 66 CYS .
1 67 CYS .
1 68 LEU .
1 69 ASN .
1 70 GLY .
1 71 GLY .
1 72 THR .
1 73 CYS .
1 74 ILE .
1 75 LEU .
1 76 GLY .
1 77 SER .
1 78 PHE .
1 79 CYS .
1 80 ALA .
1 81 CYS .
1 82 PRO .
1 83 PRO .
1 84 SER .
1 85 PHE .
1 86 TYR .
1 87 GLY .
1 88 ARG .
1 89 ASN .
1 90 CYS .
1 91 GLU .
1 92 HIS .
1 93 ASP .
1 94 VAL .
1 95 ARG .
1 96 LYS .
1 97 GLU .
1 98 HIS .
1 99 CYS .
1 100 GLY .
1 101 SER .
1 102 ILE .
1 103 LEU .
1 104 HIS .
1 105 GLY .
1 106 THR .
1 107 TRP .
1 108 LEU .
1 109 PRO .
1 110 LYS .
1 111 LYS .
1 112 CYS .
1 113 SER .
1 114 LEU .
1 115 CYS .
1 116 ARG .
1 117 CYS .
1 118 TRP .
1 119 HIS .
1 120 GLY .
1 121 GLN .
1 122 LEU .
1 123 HIS .
1 124 CYS .
1 125 LEU .
1 126 PRO .
1 127 GLN .
1 128 THR .
1 129 PHE .
1 130 LEU .
1 131 PRO .
1 132 GLY .
1 133 CYS .
1 134 ASP .
1 135 GLY .
1 136 HIS .
1 137 VAL .
1 138 MET .
1 139 ASP .
1 140 GLN .
1 141 ASP .
1 142 LEU .
1 143 LYS .
1 144 ALA .
1 145 SER .
1 146 GLY .
1 147 THR .
1 148 PRO .
1 149 CYS .
1 150 GLN .
1 151 THR .
1 152 PRO .
1 153 SER .
1 154 VAL .
1 155 THR .
1 156 THR .
1 157 THR .
1 158 PHE .
1 159 MET .
1 160 LEU .
1 161 ALA .
1 162 GLY .
1 163 ALA .
1 164 CYS .
1 165 LEU .
1 166 PHE .
1 167 LEU .
1 168 ASP .
1 169 MET .
1 170 LYS .
1 171 VAL .
#
#
loop_
_struct_asym.id
_struct_asym.entity_id
_struct_asym.details
A 1 .
#
#
loop_
_pdbx_poly_seq_scheme.asym_id
_pdbx_poly_seq_scheme.entity_id
_pdbx_poly_seq_scheme.seq_id
_pdbx_poly_seq_scheme.mon_id
_pdbx_poly_seq_scheme.pdb_seq_num
_pdbx_poly_seq_scheme.auth_seq_num
_pdbx_poly_seq_scheme.pdb_mon_id
_pdbx_poly_seq_scheme.auth_mon_id
_pdbx_poly_seq_scheme.pdb_strand_id
_pdbx_poly_seq_scheme.pdb_ins_code
A 1 1 MET 1 ? ? ? A .
A 1 2 GLY 2 ? ? ? A .
A 1 3 TYR 3 ? ? ? A .
A 1 4 PHE 4 ? ? ? A .
A 1 5 SER 5 ? ? ? A .
A 1 6 SER 6 ? ? ? A .
A 1 7 SER 7 ? ? ? A .
A 1 8 VAL 8 ? ? ? A .
A 1 9 VAL 9 ? ? ? A .
A 1 10 LEU 10 ? ? ? A .
A 1 11 LEU 11 ? ? ? A .
A 1 12 VAL 12 ? ? ? A .
A 1 13 ALA 13 ? ? ? A .
A 1 14 ILE 14 ? ? ? A .
A 1 15 SER 15 ? ? ? A .
A 1 16 SER 16 ? ? ? A .
A 1 17 ALA 17 ? ? ? A .
A 1 18 PHE 18 ? ? ? A .
A 1 19 GLU 19 ? ? ? A .
A 1 20 PHE 20 ? ? ? A .
A 1 21 GLY 21 ? ? ? A .
A 1 22 PRO 22 ? ? ? A .
A 1 23 VAL 23 ? ? ? A .
A 1 24 ALA 24 ? ? ? A .
A 1 25 GLY 25 ? ? ? A .
A 1 26 ARG 26 ? ? ? A .
A 1 27 ASP 27 ? ? ? A .
A 1 28 LEU 28 ? ? ? A .
A 1 29 ALA 29 ? ? ? A .
A 1 30 ILE 30 ? ? ? A .
A 1 31 ARG 31 ? ? ? A .
A 1 32 ASP 32 ? ? ? A .
A 1 33 ASN 33 ? ? ? A .
A 1 34 SER 34 ? ? ? A .
A 1 35 ILE 35 ? ? ? A .
A 1 36 TRP 36 ? ? ? A .
A 1 37 ASP 37 ? ? ? A .
A 1 38 GLN 38 ? ? ? A .
A 1 39 LYS 39 ? ? ? A .
A 1 40 GLU 40 ? ? ? A .
A 1 41 PRO 41 ? ? ? A .
A 1 42 ALA 42 ? ? ? A .
A 1 43 VAL 43 ? ? ? A .
A 1 44 ARG 44 ? ? ? A .
A 1 45 ASP 45 ? ? ? A .
A 1 46 ARG 46 ? ? ? A .
A 1 47 SER 47 ? ? ? A .
A 1 48 PHE 48 ? ? ? A .
A 1 49 GLN 49 ? ? ? A .
A 1 50 PHE 50 ? ? ? A .
A 1 51 VAL 51 ? ? ? A .
A 1 52 PRO 52 ? ? ? A .
A 1 53 SER 53 ? ? ? A .
A 1 54 VAL 54 ? ? ? A .
A 1 55 GLY 55 ? ? ? A .
A 1 56 ILE 56 ? ? ? A .
A 1 57 GLN 57 ? ? ? A .
A 1 58 ASN 58 ? ? ? A .
A 1 59 SER 59 ? ? ? A .
A 1 60 LYS 60 ? ? ? A .
A 1 61 SER 61 ? ? ? A .
A 1 62 LEU 62 62 LEU LEU A .
A 1 63 ASN 63 63 ASN ASN A .
A 1 64 LYS 64 64 LYS LYS A .
A 1 65 THR 65 65 THR THR A .
A 1 66 CYS 66 66 CYS CYS A .
A 1 67 CYS 67 67 CYS CYS A .
A 1 68 LEU 68 68 LEU LEU A .
A 1 69 ASN 69 69 ASN ASN A .
A 1 70 GLY 70 70 GLY GLY A .
A 1 71 GLY 71 71 GLY GLY A .
A 1 72 THR 72 72 THR THR A .
A 1 73 CYS 73 73 CYS CYS A .
A 1 74 ILE 74 74 ILE ILE A .
A 1 75 LEU 75 75 LEU LEU A .
A 1 76 GLY 76 76 GLY GLY A .
A 1 77 SER 77 77 SER SER A .
A 1 78 PHE 78 78 PHE PHE A .
A 1 79 CYS 79 79 CYS CYS A .
A 1 80 ALA 80 80 ALA ALA A .
A 1 81 CYS 81 81 CYS CYS A .
A 1 82 PRO 82 82 PRO PRO A .
A 1 83 PRO 83 83 PRO PRO A .
A 1 84 SER 84 84 SER SER A .
A 1 85 PHE 85 85 PHE PHE A .
A 1 86 TYR 86 86 TYR TYR A .
A 1 87 GLY 87 87 GLY GLY A .
A 1 88 ARG 88 88 ARG ARG A .
A 1 89 ASN 89 89 ASN ASN A .
A 1 90 CYS 90 90 CYS CYS A .
A 1 91 GLU 91 91 GLU GLU A .
A 1 92 HIS 92 92 HIS HIS A .
A 1 93 ASP 93 93 ASP ASP A .
A 1 94 VAL 94 ? ? ? A .
A 1 95 ARG 95 ? ? ? A .
A 1 96 LYS 96 ? ? ? A .
A 1 97 GLU 97 ? ? ? A .
A 1 98 HIS 98 ? ? ? A .
A 1 99 CYS 99 ? ? ? A .
A 1 100 GLY 100 ? ? ? A .
A 1 101 SER 101 ? ? ? A .
A 1 102 ILE 102 ? ? ? A .
A 1 103 LEU 103 ? ? ? A .
A 1 104 HIS 104 ? ? ? A .
A 1 105 GLY 105 ? ? ? A .
A 1 106 THR 106 ? ? ? A .
A 1 107 TRP 107 ? ? ? A .
A 1 108 LEU 108 ? ? ? A .
A 1 109 PRO 109 ? ? ? A .
A 1 110 LYS 110 ? ? ? A .
A 1 111 LYS 111 ? ? ? A .
A 1 112 CYS 112 ? ? ? A .
A 1 113 SER 113 ? ? ? A .
A 1 114 LEU 114 ? ? ? A .
A 1 115 CYS 115 ? ? ? A .
A 1 116 ARG 116 ? ? ? A .
A 1 117 CYS 117 ? ? ? A .
A 1 118 TRP 118 ? ? ? A .
A 1 119 HIS 119 ? ? ? A .
A 1 120 GLY 120 ? ? ? A .
A 1 121 GLN 121 ? ? ? A .
A 1 122 LEU 122 ? ? ? A .
A 1 123 HIS 123 ? ? ? A .
A 1 124 CYS 124 ? ? ? A .
A 1 125 LEU 125 ? ? ? A .
A 1 126 PRO 126 ? ? ? A .
A 1 127 GLN 127 ? ? ? A .
A 1 128 THR 128 ? ? ? A .
A 1 129 PHE 129 ? ? ? A .
A 1 130 LEU 130 ? ? ? A .
A 1 131 PRO 131 ? ? ? A .
A 1 132 GLY 132 ? ? ? A .
A 1 133 CYS 133 ? ? ? A .
A 1 134 ASP 134 ? ? ? A .
A 1 135 GLY 135 ? ? ? A .
A 1 136 HIS 136 ? ? ? A .
A 1 137 VAL 137 ? ? ? A .
A 1 138 MET 138 ? ? ? A .
A 1 139 ASP 139 ? ? ? A .
A 1 140 GLN 140 ? ? ? A .
A 1 141 ASP 141 ? ? ? A .
A 1 142 LEU 142 ? ? ? A .
A 1 143 LYS 143 ? ? ? A .
A 1 144 ALA 144 ? ? ? A .
A 1 145 SER 145 ? ? ? A .
A 1 146 GLY 146 ? ? ? A .
A 1 147 THR 147 ? ? ? A .
A 1 148 PRO 148 ? ? ? A .
A 1 149 CYS 149 ? ? ? A .
A 1 150 GLN 150 ? ? ? A .
A 1 151 THR 151 ? ? ? A .
A 1 152 PRO 152 ? ? ? A .
A 1 153 SER 153 ? ? ? A .
A 1 154 VAL 154 ? ? ? A .
A 1 155 THR 155 ? ? ? A .
A 1 156 THR 156 ? ? ? A .
A 1 157 THR 157 ? ? ? A .
A 1 158 PHE 158 ? ? ? A .
A 1 159 MET 159 ? ? ? A .
A 1 160 LEU 160 ? ? ? A .
A 1 161 ALA 161 ? ? ? A .
A 1 162 GLY 162 ? ? ? A .
A 1 163 ALA 163 ? ? ? A .
A 1 164 CYS 164 ? ? ? A .
A 1 165 LEU 165 ? ? ? A .
A 1 166 PHE 166 ? ? ? A .
A 1 167 LEU 167 ? ? ? A .
A 1 168 ASP 168 ? ? ? A .
A 1 169 MET 169 ? ? ? A .
A 1 170 LYS 170 ? ? ? A .
A 1 171 VAL 171 ? ? ? A .
#
#
loop_
_ma_data.id
_ma_data.name
_ma_data.content_type
_ma_data.content_type_other_details
1
'Urokinase-type plasminogen activator {PDB ID=4k24, label_asym_id=A, auth_asym_id=A, SMTL ID=4k24.1.A}'
'template structure' .
2 . target .
3 'Target-template alignment by HHblits to 4k24, label_asym_id=A'
'target-template alignment' .
4 'model 2' 'model coordinates' .
5 SMTL 'reference database' .
6 PDB 'reference database' .
7 'Template search output' other 'Results of the sequence search'
#
#
loop_
_ma_data_group.ordinal_id
_ma_data_group.group_id
_ma_data_group.data_id
1 1 2
2 1 5
3 1 6
4 2 7
5 3 2
6 3 1
7 3 3
8 4 1
9 4 3
10 5 4
#
#
loop_
_ma_data_ref_db.data_id
_ma_data_ref_db.name
_ma_data_ref_db.location_url
_ma_data_ref_db.version
_ma_data_ref_db.release_date
5 SMTL https://swissmodel.expasy.org/templates/ . 2024-12-18
6 PDB https://www.wwpdb.org . 2024-12-13
#
#
loop_
_ma_target_entity.entity_id
_ma_target_entity.data_id
_ma_target_entity.origin
1 2 'reference database'
#
#
loop_
_ma_target_entity_instance.asym_id
_ma_target_entity_instance.entity_id
_ma_target_entity_instance.details
A 1 .
#
#
loop_
_ma_template_trans_matrix.id
_ma_template_trans_matrix.rot_matrix[1][1]
_ma_template_trans_matrix.rot_matrix[2][1]
_ma_template_trans_matrix.rot_matrix[3][1]
_ma_template_trans_matrix.rot_matrix[1][2]
_ma_template_trans_matrix.rot_matrix[2][2]
_ma_template_trans_matrix.rot_matrix[3][2]
_ma_template_trans_matrix.rot_matrix[1][3]
_ma_template_trans_matrix.rot_matrix[2][3]
_ma_template_trans_matrix.rot_matrix[3][3]
_ma_template_trans_matrix.tr_vector[1]
_ma_template_trans_matrix.tr_vector[2]
_ma_template_trans_matrix.tr_vector[3]
1 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000
1.000000 0 0 0
#
#
loop_
_ma_template_details.ordinal_id
_ma_template_details.template_id
_ma_template_details.template_origin
_ma_template_details.template_entity_type
_ma_template_details.template_trans_matrix_id
_ma_template_details.template_data_id
_ma_template_details.target_asym_id
_ma_template_details.template_label_asym_id
_ma_template_details.template_label_entity_id
_ma_template_details.template_model_num
_ma_template_details.template_auth_asym_id
1 1 'reference database' polymer 1 1 A A 1 1 A
#
#
loop_
_ma_template_poly.template_id
_ma_template_poly.seq_one_letter_code
_ma_template_poly.seq_one_letter_code_can
1
;RSSNELHQVPSNCDCLNGGTCVSNKYFSNIHWCNCPKKFGGQHCEIDKSKTCYEGNGHFYRGKASTDTMG
RPCLPWNSATVLQQTYHAHRSDALQLGLGKHNYCRNPDNRRRPWCYVQVGLKPLVQECMVHDCAD
;

;RSSNELHQVPSNCDCLNGGTCVSNKYFSNIHWCNCPKKFGGQHCEIDKSKTCYEGNGHFYRGKASTDTMG
RPCLPWNSATVLQQTYHAHRSDALQLGLGKHNYCRNPDNRRRPWCYVQVGLKPLVQECMVHDCAD
;

#
#
loop_
_ma_template_poly_segment.id
_ma_template_poly_segment.template_id
_ma_template_poly_segment.residue_number_begin
_ma_template_poly_segment.residue_number_end
1 1 9 47
#
#
loop_
_ma_template_ref_db_details.template_id
_ma_template_ref_db_details.db_name
_ma_template_ref_db_details.db_name_other_details
_ma_template_ref_db_details.db_accession_code
_ma_template_ref_db_details.db_version_date
1 PDB . 4k24 2024-11-20
#
#
loop_
_ma_target_template_poly_mapping.id
_ma_target_template_poly_mapping.template_segment_id
_ma_target_template_poly_mapping.target_asym_id
_ma_target_template_poly_mapping.target_seq_id_begin
_ma_target_template_poly_mapping.target_seq_id_end
1 1 A 1 171
#
#
loop_
_ma_alignment_info.alignment_id
_ma_alignment_info.data_id
_ma_alignment_info.software_group_id
_ma_alignment_info.alignment_length
_ma_alignment_info.alignment_type
_ma_alignment_info.alignment_mode
1 3 1 177 'target-template pairwise alignment' local
#
#
loop_
_ma_alignment_details.ordinal_id
_ma_alignment_details.alignment_id
_ma_alignment_details.template_segment_id
_ma_alignment_details.target_asym_id
_ma_alignment_details.score_type
_ma_alignment_details.score_type_other_details
_ma_alignment_details.score_value
_ma_alignment_details.percent_sequence_identity
_ma_alignment_details.sequence_identity_denominator
_ma_alignment_details.sequence_identity_denominator_other_details
1 1 1 A 'HHblits e-value' . 0.00032 45.455
'Number of aligned residue pairs (not including the gaps)' .
#
#
loop_
_ma_alignment.ordinal_id
_ma_alignment.alignment_id
_ma_alignment.target_template_flag
_ma_alignment.sequence
1 1 1
MGYFSSSVVLLVAISSAFEFGPVAGRDLAIRDNSIWDQKEPAVRDRSFQFVPSVGIQNSKSLNKTCCLNGGTCILG------SFCACPPSFYGRNCEHDVRKEHCGSILHGTWLPKKCSLCRCWHGQLHCLPQTFLPGCDGHVMDQDLKASGTPCQTPSVTTTFMLAGACLFLDMKV
2 1 2
------------------------------------------------------------VPSNCDCLNGGTCVSNKYFSNIHWCNCPKKFGGQHCEID------------------------------------------------------------------------------
#
#
loop_
_ma_protocol_step.ordinal_id
_ma_protocol_step.protocol_id
_ma_protocol_step.step_id
_ma_protocol_step.method_type
_ma_protocol_step.step_name
_ma_protocol_step.details
_ma_protocol_step.software_group_id
_ma_protocol_step.input_data_group_id
_ma_protocol_step.output_data_group_id
1 1 1 'template search' 'template search' 'SWISS-MODEL template search in PDB' 2
1 2
2 1 2 'template selection' 'template selection'
'Automatic template selection by SWISS-MODEL {QSQE=0.000}' 3 2 4
3 1 3 modeling 'homology modeling'
'SWISS-MODEL auto-model mode using ProMod3 on 4k24.1' 4 3 5
#
#
loop_
_ma_model_list.ordinal_id
_ma_model_list.model_id
_ma_model_list.model_group_id
_ma_model_list.model_name
_ma_model_list.model_group_name
_ma_model_list.data_id
_ma_model_list.model_type
_ma_model_list.model_type_other_details
1 1 1 'model 2' . 4 'Homology model' .
#
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_alt_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.auth_seq_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.label_entity_id
_atom_site.auth_asym_id
_atom_site.auth_comp_id
_atom_site.B_iso_or_equiv
_atom_site.pdbx_PDB_model_num
ATOM 1 N N . LEU 62 62 ? A 13.014 17.350 36.369 1 1 A LEU 0.160 1
ATOM 2 C CA . LEU 62 62 ? A 12.225 18.321 37.192 1 1 A LEU 0.160 1
ATOM 3 C C . LEU 62 62 ? A 13.076 18.705 38.382 1 1 A LEU 0.160 1
ATOM 4 O O . LEU 62 62 ? A 13.604 17.807 39.027 1 1 A LEU 0.160 1
ATOM 5 C CB . LEU 62 62 ? A 10.918 17.601 37.622 1 1 A LEU 0.160 1
ATOM 6 C CG . LEU 62 62 ? A 9.900 18.454 38.408 1 1 A LEU 0.160 1
ATOM 7 C CD1 . LEU 62 62 ? A 9.287 19.578 37.559 1 1 A LEU 0.160 1
ATOM 8 C CD2 . LEU 62 62 ? A 8.779 17.546 38.940 1 1 A LEU 0.160 1
ATOM 9 N N . ASN 63 63 ? A 13.290 20.006 38.656 1 1 A ASN 0.300 1
ATOM 10 C CA . ASN 63 63 ? A 14.148 20.465 39.737 1 1 A ASN 0.300 1
ATOM 11 C C . ASN 63 63 ? A 13.474 21.703 40.301 1 1 A ASN 0.300 1
ATOM 12 O O . ASN 63 63 ? A 12.603 22.263 39.637 1 1 A ASN 0.300 1
ATOM 13 C CB . ASN 63 63 ? A 15.578 20.834 39.252 1 1 A ASN 0.300 1
ATOM 14 C CG . ASN 63 63 ? A 16.323 19.579 38.811 1 1 A ASN 0.300 1
ATOM 15 O OD1 . ASN 63 63 ? A 16.554 18.662 39.593 1 1 A ASN 0.300 1
ATOM 16 N ND2 . ASN 63 63 ? A 16.735 19.519 37.522 1 1 A ASN 0.300 1
ATOM 17 N N . LYS 64 64 ? A 13.815 22.144 41.530 1 1 A LYS 0.320 1
ATOM 18 C CA . LYS 64 64 ? A 13.113 23.257 42.141 1 1 A LYS 0.320 1
ATOM 19 C C . LYS 64 64 ? A 13.918 23.897 43.255 1 1 A LYS 0.320 1
ATOM 20 O O . LYS 64 64 ? A 14.807 23.266 43.829 1 1 A LYS 0.320 1
ATOM 21 C CB . LYS 64 64 ? A 11.738 22.810 42.715 1 1 A LYS 0.320 1
ATOM 22 C CG . LYS 64 64 ? A 11.804 21.682 43.765 1 1 A LYS 0.320 1
ATOM 23 C CD . LYS 64 64 ? A 10.407 21.272 44.263 1 1 A LYS 0.320 1
ATOM 24 C CE . LYS 64 64 ? A 10.449 20.123 45.275 1 1 A LYS 0.320 1
ATOM 25 N NZ . LYS 64 64 ? A 9.073 19.772 45.689 1 1 A LYS 0.320 1
ATOM 26 N N . THR 65 65 ? A 13.593 25.163 43.608 1 1 A THR 0.380 1
ATOM 27 C CA . THR 65 65 ? A 14.255 25.951 44.655 1 1 A THR 0.380 1
ATOM 28 C C . THR 65 65 ? A 15.778 25.972 44.494 1 1 A THR 0.380 1
ATOM 29 O O . THR 65 65 ? A 16.268 26.118 43.385 1 1 A THR 0.380 1
ATOM 30 C CB . THR 65 65 ? A 13.753 25.579 46.048 1 1 A THR 0.380 1
ATOM 31 O OG1 . THR 65 65 ? A 12.333 25.470 46.048 1 1 A THR 0.380 1
ATOM 32 C CG2 . THR 65 65 ? A 14.076 26.610 47.144 1 1 A THR 0.380 1
ATOM 33 N N . CYS 66 66 ? A 16.580 25.857 45.572 1 1 A CYS 0.520 1
ATOM 34 C CA . CYS 66 66 ? A 18.023 26.003 45.485 1 1 A CYS 0.520 1
ATOM 35 C C . CYS 66 66 ? A 18.650 25.013 46.445 1 1 A CYS 0.520 1
ATOM 36 O O . CYS 66 66 ? A 19.705 25.280 47.015 1 1 A CYS 0.520 1
ATOM 37 C CB . CYS 66 66 ? A 18.540 27.418 45.903 1 1 A CYS 0.520 1
ATOM 38 S SG . CYS 66 66 ? A 17.872 28.791 44.902 1 1 A CYS 0.520 1
ATOM 39 N N . CYS 67 67 ? A 17.992 23.869 46.718 1 1 A CYS 0.600 1
ATOM 40 C CA . CYS 67 67 ? A 18.405 23.040 47.850 1 1 A CYS 0.600 1
ATOM 41 C C . CYS 67 67 ? A 19.385 21.918 47.494 1 1 A CYS 0.600 1
ATOM 42 O O . CYS 67 67 ? A 19.412 21.443 46.357 1 1 A CYS 0.600 1
ATOM 43 C CB . CYS 67 67 ? A 17.185 22.428 48.599 1 1 A CYS 0.600 1
ATOM 44 S SG . CYS 67 67 ? A 15.685 23.471 48.529 1 1 A CYS 0.600 1
ATOM 45 N N . LEU 68 68 ? A 20.243 21.475 48.440 1 1 A LEU 0.610 1
ATOM 46 C CA . LEU 68 68 ? A 21.380 20.605 48.127 1 1 A LEU 0.610 1
ATOM 47 C C . LEU 68 68 ? A 21.420 19.291 48.923 1 1 A LEU 0.610 1
ATOM 48 O O . LEU 68 68 ? A 20.890 19.186 50.029 1 1 A LEU 0.610 1
ATOM 49 C CB . LEU 68 68 ? A 22.748 21.288 48.399 1 1 A LEU 0.610 1
ATOM 50 C CG . LEU 68 68 ? A 23.128 22.557 47.600 1 1 A LEU 0.610 1
ATOM 51 C CD1 . LEU 68 68 ? A 23.078 22.347 46.077 1 1 A LEU 0.610 1
ATOM 52 C CD2 . LEU 68 68 ? A 22.329 23.792 48.049 1 1 A LEU 0.610 1
ATOM 53 N N . ASN 69 69 ? A 22.080 18.240 48.367 1 1 A ASN 0.590 1
ATOM 54 C CA . ASN 69 69 ? A 22.507 17.003 49.044 1 1 A ASN 0.590 1
ATOM 55 C C . ASN 69 69 ? A 21.384 16.134 49.603 1 1 A ASN 0.590 1
ATOM 56 O O . ASN 69 69 ? A 21.510 15.536 50.668 1 1 A ASN 0.590 1
ATOM 57 C CB . ASN 69 69 ? A 23.557 17.228 50.178 1 1 A ASN 0.590 1
ATOM 58 C CG . ASN 69 69 ? A 24.726 18.086 49.715 1 1 A ASN 0.590 1
ATOM 59 O OD1 . ASN 69 69 ? A 24.673 19.319 49.735 1 1 A ASN 0.590 1
ATOM 60 N ND2 . ASN 69 69 ? A 25.844 17.464 49.285 1 1 A ASN 0.590 1
ATOM 61 N N . GLY 70 70 ? A 20.243 16.034 48.891 1 1 A GLY 0.600 1
ATOM 62 C CA . GLY 70 70 ? A 19.039 15.382 49.408 1 1 A GLY 0.600 1
ATOM 63 C C . GLY 70 70 ? A 18.247 16.257 50.348 1 1 A GLY 0.600 1
ATOM 64 O O . GLY 70 70 ? A 17.204 15.844 50.843 1 1 A GLY 0.600 1
ATOM 65 N N . GLY 71 71 ? A 18.703 17.507 50.592 1 1 A GLY 0.670 1
ATOM 66 C CA . GLY 71 71 ? A 17.971 18.565 51.278 1 1 A GLY 0.670 1
ATOM 67 C C . GLY 71 71 ? A 16.629 18.850 50.673 1 1 A GLY 0.670 1
ATOM 68 O O . GLY 71 71 ? A 16.528 19.226 49.507 1 1 A GLY 0.670 1
ATOM 69 N N . THR 72 72 ? A 15.537 18.694 51.440 1 1 A THR 0.620 1
ATOM 70 C CA . THR 72 72 ? A 14.212 18.753 50.839 1 1 A THR 0.620 1
ATOM 71 C C . THR 72 72 ? A 13.629 20.150 50.884 1 1 A THR 0.620 1
ATOM 72 O O . THR 72 72 ? A 13.542 20.815 51.919 1 1 A THR 0.620 1
ATOM 73 C CB . THR 72 72 ? A 13.237 17.681 51.326 1 1 A THR 0.620 1
ATOM 74 O OG1 . THR 72 72 ? A 12.783 17.891 52.651 1 1 A THR 0.620 1
ATOM 75 C CG2 . THR 72 72 ? A 13.945 16.314 51.316 1 1 A THR 0.620 1
ATOM 76 N N . CYS 73 73 ? A 13.246 20.689 49.712 1 1 A CYS 0.560 1
ATOM 77 C CA . CYS 73 73 ? A 12.754 22.048 49.633 1 1 A CYS 0.560 1
ATOM 78 C C . CYS 73 73 ? A 11.307 22.147 50.043 1 1 A CYS 0.560 1
ATOM 79 O O . CYS 73 73 ? A 10.416 21.635 49.353 1 1 A CYS 0.560 1
ATOM 80 C CB . CYS 73 73 ? A 12.830 22.610 48.193 1 1 A CYS 0.560 1
ATOM 81 S SG . CYS 73 73 ? A 14.445 22.348 47.401 1 1 A CYS 0.560 1
ATOM 82 N N . ILE 74 74 ? A 11.039 22.834 51.162 1 1 A ILE 0.480 1
ATOM 83 C CA . ILE 74 74 ? A 9.730 22.839 51.775 1 1 A ILE 0.480 1
ATOM 84 C C . ILE 74 74 ? A 9.020 24.113 51.376 1 1 A ILE 0.480 1
ATOM 85 O O . ILE 74 74 ? A 9.444 25.215 51.710 1 1 A ILE 0.480 1
ATOM 86 C CB . ILE 74 74 ? A 9.812 22.706 53.290 1 1 A ILE 0.480 1
ATOM 87 C CG1 . ILE 74 74 ? A 10.680 21.492 53.711 1 1 A ILE 0.480 1
ATOM 88 C CG2 . ILE 74 74 ? A 8.397 22.604 53.901 1 1 A ILE 0.480 1
ATOM 89 C CD1 . ILE 74 74 ? A 10.204 20.127 53.188 1 1 A ILE 0.480 1
ATOM 90 N N . LEU 75 75 ? A 7.947 23.980 50.567 1 1 A LEU 0.410 1
ATOM 91 C CA . LEU 75 75 ? A 7.060 25.053 50.123 1 1 A LEU 0.410 1
ATOM 92 C C . LEU 75 75 ? A 7.713 26.235 49.400 1 1 A LEU 0.410 1
ATOM 93 O O . LEU 75 75 ? A 7.085 27.266 49.163 1 1 A LEU 0.410 1
ATOM 94 C CB . LEU 75 75 ? A 6.172 25.535 51.299 1 1 A LEU 0.410 1
ATOM 95 C CG . LEU 75 75 ? A 5.309 24.420 51.935 1 1 A LEU 0.410 1
ATOM 96 C CD1 . LEU 75 75 ? A 4.596 24.929 53.198 1 1 A LEU 0.410 1
ATOM 97 C CD2 . LEU 75 75 ? A 4.270 23.841 50.958 1 1 A LEU 0.410 1
ATOM 98 N N . GLY 76 76 ? A 8.994 26.106 48.994 1 1 A GLY 0.350 1
ATOM 99 C CA . GLY 76 76 ? A 9.768 27.200 48.412 1 1 A GLY 0.350 1
ATOM 100 C C . GLY 76 76 ? A 10.303 28.168 49.439 1 1 A GLY 0.350 1
ATOM 101 O O . GLY 76 76 ? A 10.897 29.182 49.080 1 1 A GLY 0.350 1
ATOM 102 N N . SER 77 77 ? A 10.103 27.893 50.741 1 1 A SER 0.400 1
ATOM 103 C CA . SER 77 77 ? A 10.225 28.901 51.788 1 1 A SER 0.400 1
ATOM 104 C C . SER 77 77 ? A 11.373 28.680 52.776 1 1 A SER 0.400 1
ATOM 105 O O . SER 77 77 ? A 11.574 29.553 53.634 1 1 A SER 0.400 1
ATOM 106 C CB . SER 77 77 ? A 8.884 29.006 52.577 1 1 A SER 0.400 1
ATOM 107 O OG . SER 77 77 ? A 8.524 27.777 53.214 1 1 A SER 0.400 1
ATOM 108 N N . PHE 78 78 ? A 12.179 27.596 52.626 1 1 A PHE 0.490 1
ATOM 109 C CA . PHE 78 78 ? A 13.326 27.154 53.434 1 1 A PHE 0.490 1
ATOM 110 C C . PHE 78 78 ? A 13.586 25.662 53.098 1 1 A PHE 0.490 1
ATOM 111 O O . PHE 78 78 ? A 12.832 25.035 52.319 1 1 A PHE 0.490 1
ATOM 112 C CB . PHE 78 78 ? A 13.230 27.500 54.979 1 1 A PHE 0.490 1
ATOM 113 C CG . PHE 78 78 ? A 14.417 27.132 55.838 1 1 A PHE 0.490 1
ATOM 114 C CD1 . PHE 78 78 ? A 14.355 26.026 56.701 1 1 A PHE 0.490 1
ATOM 115 C CD2 . PHE 78 78 ? A 15.563 27.946 55.873 1 1 A PHE 0.490 1
ATOM 116 C CE1 . PHE 78 78 ? A 15.410 25.740 57.576 1 1 A PHE 0.490 1
ATOM 117 C CE2 . PHE 78 78 ? A 16.624 27.658 56.744 1 1 A PHE 0.490 1
ATOM 118 C CZ . PHE 78 78 ? A 16.547 26.554 57.598 1 1 A PHE 0.490 1
ATOM 119 N N . CYS 79 79 ? A 14.703 25.069 53.562 1 1 A CYS 0.640 1
ATOM 120 C CA . CYS 79 79 ? A 15.226 23.773 53.160 1 1 A CYS 0.640 1
ATOM 121 C C . CYS 79 79 ? A 15.351 22.888 54.407 1 1 A CYS 0.640 1
ATOM 122 O O . CYS 79 79 ? A 16.006 23.250 55.385 1 1 A CYS 0.640 1
ATOM 123 C CB . CYS 79 79 ? A 16.635 23.905 52.508 1 1 A CYS 0.640 1
ATOM 124 S SG . CYS 79 79 ? A 16.741 25.083 51.110 1 1 A CYS 0.640 1
ATOM 125 N N . ALA 80 80 ? A 14.721 21.700 54.441 1 1 A ALA 0.700 1
ATOM 126 C CA . ALA 80 80 ? A 14.832 20.802 55.577 1 1 A ALA 0.700 1
ATOM 127 C C . ALA 80 80 ? A 15.995 19.844 55.381 1 1 A ALA 0.700 1
ATOM 128 O O . ALA 80 80 ? A 15.900 18.906 54.585 1 1 A ALA 0.700 1
ATOM 129 C CB . ALA 80 80 ? A 13.548 19.960 55.714 1 1 A ALA 0.700 1
ATOM 130 N N . CYS 81 81 ? A 17.140 20.050 56.073 1 1 A CYS 0.630 1
ATOM 131 C CA . CYS 81 81 ? A 18.387 19.404 55.665 1 1 A CYS 0.630 1
ATOM 132 C C . CYS 81 81 ? A 18.845 18.236 56.484 1 1 A CYS 0.630 1
ATOM 133 O O . CYS 81 81 ? A 18.439 18.104 57.635 1 1 A CYS 0.630 1
ATOM 134 C CB . CYS 81 81 ? A 19.510 20.460 55.472 1 1 A CYS 0.630 1
ATOM 135 S SG . CYS 81 81 ? A 19.512 20.755 53.664 1 1 A CYS 0.630 1
ATOM 136 N N . PRO 82 82 ? A 19.657 17.329 55.912 1 1 A PRO 0.610 1
ATOM 137 C CA . PRO 82 82 ? A 20.062 16.132 56.609 1 1 A PRO 0.610 1
ATOM 138 C C . PRO 82 82 ? A 21.167 16.467 57.619 1 1 A PRO 0.610 1
ATOM 139 O O . PRO 82 82 ? A 22.015 17.256 57.240 1 1 A PRO 0.610 1
ATOM 140 C CB . PRO 82 82 ? A 20.520 15.206 55.459 1 1 A PRO 0.610 1
ATOM 141 C CG . PRO 82 82 ? A 21.093 16.142 54.385 1 1 A PRO 0.610 1
ATOM 142 C CD . PRO 82 82 ? A 20.268 17.420 54.577 1 1 A PRO 0.610 1
ATOM 143 N N . PRO 83 83 ? A 21.187 15.909 58.860 1 1 A PRO 0.570 1
ATOM 144 C CA . PRO 83 83 ? A 22.159 16.113 59.936 1 1 A PRO 0.570 1
ATOM 145 C C . PRO 83 83 ? A 23.418 16.886 59.701 1 1 A PRO 0.570 1
ATOM 146 O O . PRO 83 83 ? A 23.606 17.949 60.289 1 1 A PRO 0.570 1
ATOM 147 C CB . PRO 83 83 ? A 22.379 14.677 60.463 1 1 A PRO 0.570 1
ATOM 148 C CG . PRO 83 83 ? A 21.000 14.005 60.262 1 1 A PRO 0.570 1
ATOM 149 C CD . PRO 83 83 ? A 20.202 14.954 59.342 1 1 A PRO 0.570 1
ATOM 150 N N . SER 84 84 ? A 24.288 16.379 58.830 1 1 A SER 0.590 1
ATOM 151 C CA . SER 84 84 ? A 25.577 16.939 58.514 1 1 A SER 0.590 1
ATOM 152 C C . SER 84 84 ? A 25.570 18.282 57.801 1 1 A SER 0.590 1
ATOM 153 O O . SER 84 84 ? A 26.621 18.863 57.592 1 1 A SER 0.590 1
ATOM 154 C CB . SER 84 84 ? A 26.346 15.963 57.593 1 1 A SER 0.590 1
ATOM 155 O OG . SER 84 84 ? A 26.303 14.626 58.110 1 1 A SER 0.590 1
ATOM 156 N N . PHE 85 85 ? A 24.408 18.805 57.373 1 1 A PHE 0.600 1
ATOM 157 C CA . PHE 85 85 ? A 24.341 19.993 56.549 1 1 A PHE 0.600 1
ATOM 158 C C . PHE 85 85 ? A 23.517 21.060 57.217 1 1 A PHE 0.600 1
ATOM 159 O O . PHE 85 85 ? A 22.465 20.798 57.809 1 1 A PHE 0.600 1
ATOM 160 C CB . PHE 85 85 ? A 23.695 19.706 55.162 1 1 A PHE 0.600 1
ATOM 161 C CG . PHE 85 85 ? A 24.723 19.157 54.217 1 1 A PHE 0.600 1
ATOM 162 C CD1 . PHE 85 85 ? A 25.258 19.913 53.158 1 1 A PHE 0.600 1
ATOM 163 C CD2 . PHE 85 85 ? A 25.181 17.853 54.420 1 1 A PHE 0.600 1
ATOM 164 C CE1 . PHE 85 85 ? A 26.270 19.380 52.348 1 1 A PHE 0.600 1
ATOM 165 C CE2 . PHE 85 85 ? A 26.217 17.331 53.640 1 1 A PHE 0.600 1
ATOM 166 C CZ . PHE 85 85 ? A 26.764 18.097 52.604 1 1 A PHE 0.600 1
ATOM 167 N N . TYR 86 86 ? A 23.964 22.319 57.104 1 1 A TYR 0.600 1
ATOM 168 C CA . TYR 86 86 ? A 23.265 23.445 57.671 1 1 A TYR 0.600 1
ATOM 169 C C . TYR 86 86 ? A 23.516 24.727 56.884 1 1 A TYR 0.600 1
ATOM 170 O O . TYR 86 86 ? A 24.134 24.732 55.804 1 1 A TYR 0.600 1
ATOM 171 C CB . TYR 86 86 ? A 23.520 23.592 59.205 1 1 A TYR 0.600 1
ATOM 172 C CG . TYR 86 86 ? A 24.982 23.793 59.537 1 1 A TYR 0.600 1
ATOM 173 C CD1 . TYR 86 86 ? A 25.799 22.708 59.875 1 1 A TYR 0.600 1
ATOM 174 C CD2 . TYR 86 86 ? A 25.533 25.081 59.534 1 1 A TYR 0.600 1
ATOM 175 C CE1 . TYR 86 86 ? A 27.156 22.906 60.180 1 1 A TYR 0.600 1
ATOM 176 C CE2 . TYR 86 86 ? A 26.880 25.292 59.872 1 1 A TYR 0.600 1
ATOM 177 C CZ . TYR 86 86 ? A 27.703 24.189 60.151 1 1 A TYR 0.600 1
ATOM 178 O OH . TYR 86 86 ? A 29.110 24.353 60.207 1 1 A TYR 0.600 1
ATOM 179 N N . GLY 87 87 ? A 22.962 25.866 57.344 1 1 A GLY 0.590 1
ATOM 180 C CA . GLY 87 87 ? A 22.878 27.091 56.553 1 1 A GLY 0.590 1
ATOM 181 C C . GLY 87 87 ? A 21.615 27.124 55.746 1 1 A GLY 0.590 1
ATOM 182 O O . GLY 87 87 ? A 20.943 26.104 55.599 1 1 A GLY 0.590 1
ATOM 183 N N . ARG 88 88 ? A 21.217 28.301 55.228 1 1 A ARG 0.500 1
ATOM 184 C CA . ARG 88 88 ? A 19.849 28.492 54.769 1 1 A ARG 0.500 1
ATOM 185 C C . ARG 88 88 ? A 19.461 27.614 53.606 1 1 A ARG 0.500 1
ATOM 186 O O . ARG 88 88 ? A 18.407 26.978 53.623 1 1 A ARG 0.500 1
ATOM 187 C CB . ARG 88 88 ? A 19.534 29.962 54.382 1 1 A ARG 0.500 1
ATOM 188 C CG . ARG 88 88 ? A 18.035 30.153 54.030 1 1 A ARG 0.500 1
ATOM 189 C CD . ARG 88 88 ? A 17.643 31.530 53.504 1 1 A ARG 0.500 1
ATOM 190 N NE . ARG 88 88 ? A 18.361 31.692 52.203 1 1 A ARG 0.500 1
ATOM 191 C CZ . ARG 88 88 ? A 18.593 32.871 51.617 1 1 A ARG 0.500 1
ATOM 192 N NH1 . ARG 88 88 ? A 18.084 33.999 52.106 1 1 A ARG 0.500 1
ATOM 193 N NH2 . ARG 88 88 ? A 19.362 32.918 50.534 1 1 A ARG 0.500 1
ATOM 194 N N . ASN 89 89 ? A 20.320 27.522 52.586 1 1 A ASN 0.590 1
ATOM 195 C CA . ASN 89 89 ? A 20.017 26.705 51.434 1 1 A ASN 0.590 1
ATOM 196 C C . ASN 89 89 ? A 20.681 25.350 51.545 1 1 A ASN 0.590 1
ATOM 197 O O . ASN 89 89 ? A 20.510 24.506 50.666 1 1 A ASN 0.590 1
ATOM 198 C CB . ASN 89 89 ? A 20.489 27.380 50.130 1 1 A ASN 0.590 1
ATOM 199 C CG . ASN 89 89 ? A 19.811 28.736 49.964 1 1 A ASN 0.590 1
ATOM 200 O OD1 . ASN 89 89 ? A 18.611 28.941 50.147 1 1 A ASN 0.590 1
ATOM 201 N ND2 . ASN 89 89 ? A 20.606 29.746 49.541 1 1 A ASN 0.590 1
ATOM 202 N N . CYS 90 90 ? A 21.431 25.130 52.649 1 1 A CYS 0.620 1
ATOM 203 C CA . CYS 90 90 ? A 22.241 23.952 52.932 1 1 A CYS 0.620 1
ATOM 204 C C . CYS 90 90 ? A 23.582 23.964 52.249 1 1 A CYS 0.620 1
ATOM 205 O O . CYS 90 90 ? A 23.952 23.085 51.480 1 1 A CYS 0.620 1
ATOM 206 C CB . CYS 90 90 ? A 21.559 22.607 52.715 1 1 A CYS 0.620 1
ATOM 207 S SG . CYS 90 90 ? A 19.880 22.700 53.385 1 1 A CYS 0.620 1
ATOM 208 N N . GLU 91 91 ? A 24.325 25.029 52.530 1 1 A GLU 0.550 1
ATOM 209 C CA . GLU 91 91 ? A 25.461 25.506 51.786 1 1 A GLU 0.550 1
ATOM 210 C C . GLU 91 91 ? A 26.761 25.094 52.463 1 1 A GLU 0.550 1
ATOM 211 O O . GLU 91 91 ? A 27.842 25.298 51.915 1 1 A GLU 0.550 1
ATOM 212 C CB . GLU 91 91 ? A 25.328 27.068 51.733 1 1 A GLU 0.550 1
ATOM 213 C CG . GLU 91 91 ? A 23.962 27.555 52.336 1 1 A GLU 0.550 1
ATOM 214 C CD . GLU 91 91 ? A 23.569 29.031 52.211 1 1 A GLU 0.550 1
ATOM 215 O OE1 . GLU 91 91 ? A 22.366 29.288 52.492 1 1 A GLU 0.550 1
ATOM 216 O OE2 . GLU 91 91 ? A 24.413 29.880 51.846 1 1 A GLU 0.550 1
ATOM 217 N N . HIS 92 92 ? A 26.689 24.488 53.672 1 1 A HIS 0.550 1
ATOM 218 C CA . HIS 92 92 ? A 27.869 24.224 54.477 1 1 A HIS 0.550 1
ATOM 219 C C . HIS 92 92 ? A 27.671 23.061 55.453 1 1 A HIS 0.550 1
ATOM 220 O O . HIS 92 92 ? A 26.538 22.712 55.802 1 1 A HIS 0.550 1
ATOM 221 C CB . HIS 92 92 ? A 28.277 25.516 55.235 1 1 A HIS 0.550 1
ATOM 222 C CG . HIS 92 92 ? A 29.632 25.457 55.852 1 1 A HIS 0.550 1
ATOM 223 N ND1 . HIS 92 92 ? A 30.714 25.173 55.047 1 1 A HIS 0.550 1
ATOM 224 C CD2 . HIS 92 92 ? A 29.992 25.439 57.160 1 1 A HIS 0.550 1
ATOM 225 C CE1 . HIS 92 92 ? A 31.713 24.968 55.883 1 1 A HIS 0.550 1
ATOM 226 N NE2 . HIS 92 92 ? A 31.331 25.107 57.177 1 1 A HIS 0.550 1
ATOM 227 N N . ASP 93 93 ? A 28.798 22.447 55.862 1 1 A ASP 0.630 1
ATOM 228 C CA . ASP 93 93 ? A 28.949 21.231 56.638 1 1 A ASP 0.630 1
ATOM 229 C C . ASP 93 93 ? A 29.828 21.572 57.895 1 1 A ASP 0.630 1
ATOM 230 O O . ASP 93 93 ? A 30.550 22.609 57.900 1 1 A ASP 0.630 1
ATOM 231 C CB . ASP 93 93 ? A 29.435 20.129 55.615 1 1 A ASP 0.630 1
ATOM 232 C CG . ASP 93 93 ? A 30.435 19.053 56.047 1 1 A ASP 0.630 1
ATOM 233 O OD1 . ASP 93 93 ? A 31.647 19.259 55.758 1 1 A ASP 0.630 1
ATOM 234 O OD2 . ASP 93 93 ? A 29.990 17.957 56.485 1 1 A ASP 0.630 1
ATOM 235 O OXT . ASP 93 93 ? A 29.677 20.880 58.936 1 1 A ASP 0.630 1
#
#
loop_
_atom_type.symbol
C
N
O
S
#
#
loop_
_ma_qa_metric.id
_ma_qa_metric.name
_ma_qa_metric.description
_ma_qa_metric.type
_ma_qa_metric.mode
_ma_qa_metric.type_other_details
_ma_qa_metric.software_group_id
1 QMEANDisCo 'Predicted accuracy according to all-atom lDDT in [0,1].'
'pLDDT all-atom in [0,1]' local . 5
2 QMEANDisCo 'Predicted accuracy according to all-atom lDDT in [0,1].'
'pLDDT all-atom in [0,1]' global . 5
3 GMQE
'Global Model Quality Estimate of the model accuracy, calculated by SWISS-MODEL.'
'normalized score' global . 6
#
#
loop_
_ma_qa_metric_global.ordinal_id
_ma_qa_metric_global.model_id
_ma_qa_metric_global.metric_id
_ma_qa_metric_global.metric_value
1 1 2 0.532
2 1 3 0.070
#
#
loop_
_ma_qa_metric_local.ordinal_id
_ma_qa_metric_local.model_id
_ma_qa_metric_local.label_asym_id
_ma_qa_metric_local.label_seq_id
_ma_qa_metric_local.label_comp_id
_ma_qa_metric_local.metric_id
_ma_qa_metric_local.metric_value
1 1 A 62 LEU 1 0.160
2 1 A 63 ASN 1 0.300
3 1 A 64 LYS 1 0.320
4 1 A 65 THR 1 0.380
5 1 A 66 CYS 1 0.520
6 1 A 67 CYS 1 0.600
7 1 A 68 LEU 1 0.610
8 1 A 69 ASN 1 0.590
9 1 A 70 GLY 1 0.600
10 1 A 71 GLY 1 0.670
11 1 A 72 THR 1 0.620
12 1 A 73 CYS 1 0.560
13 1 A 74 ILE 1 0.480
14 1 A 75 LEU 1 0.410
15 1 A 76 GLY 1 0.350
16 1 A 77 SER 1 0.400
17 1 A 78 PHE 1 0.490
18 1 A 79 CYS 1 0.640
19 1 A 80 ALA 1 0.700
20 1 A 81 CYS 1 0.630
21 1 A 82 PRO 1 0.610
22 1 A 83 PRO 1 0.570
23 1 A 84 SER 1 0.590
24 1 A 85 PHE 1 0.600
25 1 A 86 TYR 1 0.600
26 1 A 87 GLY 1 0.590
27 1 A 88 ARG 1 0.500
28 1 A 89 ASN 1 0.590
29 1 A 90 CYS 1 0.620
30 1 A 91 GLU 1 0.550
31 1 A 92 HIS 1 0.550
32 1 A 93 ASP 1 0.630
#
#
loop_
_pdbx_data_usage.id
_pdbx_data_usage.type
_pdbx_data_usage.details
_pdbx_data_usage.url
1 license
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