data_SMR-249054712830a565ca3f3b1a9293f355_1
_entry.id SMR-249054712830a565ca3f3b1a9293f355_1
_struct.entry_id SMR-249054712830a565ca3f3b1a9293f355_1
_struct.pdbx_model_details
;This model was generated unsupervised by the SWISS-MODEL homology-modelling pipeline for the SWISS-MODEL Repository, a database of annotated 3D protein structure models. The modelled monomer covers following UniProtKB entries:

  - P22518 (isoform 2)/ CLK1_MOUSE, Dual specificity protein kinase CLK1

Estimated model accuracy of this model is 0.044, calculated by SWISS-MODEL as Global Model Quality Estimate (GMQE).
;
_struct.pdbx_structure_determination_methodology computational
_struct.title 'Model for UniProtKB entries P22518 (isoform 2)'
_audit_conform.dict_location https://raw.githubusercontent.com/ihmwg/ModelCIF/d18ba38/base/mmcif_ma-core.dic
_audit_conform.dict_name mmcif_ma.dic
_audit_conform.dict_version 1.4.6
#
loop_
_citation.id
_citation.title
_citation.journal_abbrev
_citation.journal_volume
_citation.page_first
_citation.page_last
_citation.year
_citation.pdbx_database_id_PubMed
_citation.pdbx_database_id_DOI
primary 'The SWISS-MODEL Repository - new features and functionality'
'Nucleic Acids Res.' 45 D313 D319 2017 27899672 10.1093/nar/gkw1132
2 'SWISS-MODEL: homology modelling of protein structures and complexes'
'Nucleic Acids Res.' 46 W296 W303 2018 29788355 10.1093/nar/gky427
3 'ProMod3 - A versatile homology modelling toolbox' 'PLoS Comput. Biol.' 17(1)
1 18 2021 33507980 10.1371/journal.pcbi.1008667
4 'QMEANDisCo - distance constraints applied on model quality estimation'
Bioinformatics 36 1765 1771 2020 31697312 10.1093/bioinformatics/btz828
5
'OpenStructure: an integrated software framework for computational structural biology'
'Acta Crystallogr., Sect. D: Biol. Crystallogr.' 69 701 709 2013 23633579
10.1107/S0907444913007051
6 'BLAST+: architecture and applications' 'BMC Bioinf.' 10 421 . 2009 20003500
10.1186/1471-2105-10-421
7 'HH-suite3 for fast remote homology detection and deep protein annotation'
'BMC Bioinf.' 20 473 . 2019 31521110 10.1186/s12859-019-3019-7
#
#
loop_
_citation_author.citation_id
_citation_author.name
_citation_author.ordinal
primary 'Bienert, S.' 1
primary 'Waterhouse, A.' 2
primary 'de Beer, T.A.P.' 3
primary 'Tauriello, G.' 4
primary 'Studer, G.' 5
primary 'Bordoli, L.' 6
primary 'Schwede, T.' 7
2 'Waterhouse, A.' 8
2 'Bertoni, M.' 9
2 'Bienert, S.' 10
2 'Studer, G.' 11
2 'Tauriello, G.' 12
2 'Gumienny, R.' 13
2 'Heer, F.T.' 14
2 'de Beer, T.A.P.' 15
2 'Rempfer, C.' 16
2 'Bordoli, L.' 17
2 'Lepore, R.' 18
2 'Schwede, T.' 19
3 'Studer, G.' 20
3 'Tauriello, G.' 21
3 'Bienert, S.' 22
3 'Biasini, M.' 23
3 'Johner, N.' 24
3 'Schwede, T.' 25
4 'Studer, G.' 26
4 'Rempfer, C.' 27
4 'Waterhouse, A.M.' 28
4 'Gumienny, R.' 29
4 'Haas, J.' 30
4 'Schwede, T.' 31
5 'Biasini, M.' 32
5 'Schmidt, T.' 33
5 'Bienert, S.' 34
5 'Mariani, V.' 35
5 'Studer, G.' 36
5 'Haas, J.' 37
5 'Johner, N.' 38
5 'Schenk, A.D.' 39
5 'Philippsen, A.' 40
5 'Schwede, T.' 41
6 'Camacho, C.' 42
6 'Coulouris, G.' 43
6 'Avagyan, V.' 44
6 'Ma, N.' 45
6 'Papadopoulos, J.' 46
6 'Bealer, K.' 47
6 'Madden, T.L.' 48
7 'Steinegger, M.' 49
7 'Meier, M.' 50
7 'Mirdita, M.' 51
7 'Vohringer, H.' 52
7 'Haunsberger, S.J.' 53
7 'Soding, J.' 54
#
#
loop_
_software.pdbx_ordinal
_software.name
_software.classification
_software.description
_software.version
_software.type
_software.location
_software.citation_id
1 SWISS-MODEL 'model building' 'Homology modelling web service' 2024-10.3
package https://swissmodel.expasy.org 2
2 ProMod3 'model building' 'Modular homology modelling engine' 3.4.1 library
https://git.scicore.unibas.ch/schwede/ProMod3 3
3 QMEAN 'model building' 'QMEAN - Qualitative Model Energy ANalysis' 4.3.1
library https://git.scicore.unibas.ch/schwede/QMEAN 4
4 OpenStructure 'data processing'
'Open-Source Computational Structural Biology Framework' 2.8.0 package
https://openstructure.org/ 5
5 BLAST 'data collection' . 2.2.31 package https://blast.ncbi.nlm.nih.gov 6
6 HH-suite 'data collection' 'HH-suite3 for sensitive sequence searching' 3.2.0
package https://github.com/soedinglab/hh-suite 7
#
#
loop_
_ma_software_group.ordinal_id
_ma_software_group.group_id
_ma_software_group.software_id
_ma_software_group.parameter_group_id
1 1 6 .
2 2 1 .
3 2 4 .
4 2 5 .
5 2 6 .
6 3 1 .
7 3 4 .
8 4 1 .
9 4 2 .
10 4 4 .
11 5 3 .
12 6 1 .
13 6 3 .
14 6 4 .
#
#
loop_
_audit_author.name
_audit_author.pdbx_ordinal
'Bienert, S.' 1
'Waterhouse, A.' 2
'de Beer, T.A.P.' 3
'Tauriello, G.' 4
'Studer, G.' 5
'Bordoli, L.' 6
'Schwede, T.' 7
#
#
loop_
_chem_comp.id
_chem_comp.type
_chem_comp.name
_chem_comp.formula
_chem_comp.formula_weight
_chem_comp.ma_provenance
ALA 'L-peptide linking' ALANINE 'C3 H7 N O2' 89.094 'CCD Core'
ARG 'L-peptide linking' ARGININE 'C6 H15 N4 O2 1' 175.212 'CCD Core'
ASN 'L-peptide linking' ASPARAGINE 'C4 H8 N2 O3' 132.119 'CCD Core'
ASP 'L-peptide linking' 'ASPARTIC ACID' 'C4 H7 N O4' 133.103 'CCD Core'
CYS 'L-peptide linking' CYSTEINE 'C3 H7 N O2 S' 121.154 'CCD Core'
GLN 'L-peptide linking' GLUTAMINE 'C5 H10 N2 O3' 146.146 'CCD Core'
GLU 'L-peptide linking' 'GLUTAMIC ACID' 'C5 H9 N O4' 147.130 'CCD Core'
GLY 'peptide linking' GLYCINE 'C2 H5 N O2' 75.067 'CCD Core'
HIS 'L-peptide linking' HISTIDINE 'C6 H10 N3 O2 1' 156.165 'CCD Core'
ILE 'L-peptide linking' ISOLEUCINE 'C6 H13 N O2' 131.175 'CCD Core'
LEU 'L-peptide linking' LEUCINE 'C6 H13 N O2' 131.175 'CCD Core'
LYS 'L-peptide linking' LYSINE 'C6 H15 N2 O2 1' 147.198 'CCD Core'
MET 'L-peptide linking' METHIONINE 'C5 H11 N O2 S' 149.208 'CCD Core'
PHE 'L-peptide linking' PHENYLALANINE 'C9 H11 N O2' 165.192 'CCD Core'
PRO 'L-peptide linking' PROLINE 'C5 H9 N O2' 115.132 'CCD Core'
SER 'L-peptide linking' SERINE 'C3 H7 N O3' 105.093 'CCD Core'
THR 'L-peptide linking' THREONINE 'C4 H9 N O3' 119.120 'CCD Core'
TRP 'L-peptide linking' TRYPTOPHAN 'C11 H12 N2 O2' 204.229 'CCD Core'
TYR 'L-peptide linking' TYROSINE 'C9 H11 N O3' 181.191 'CCD Core'
VAL 'L-peptide linking' VALINE 'C5 H11 N O2' 117.148 'CCD Core'
#
#
loop_
_entity.id
_entity.type
_entity.src_method
_entity.pdbx_description
_entity.formula_weight
_entity.pdbx_number_of_molecules
_entity.details
1 polymer man . 18774.234 1 .
#
#
loop_
_struct_ref.id
_struct_ref.entity_id
_struct_ref.db_name
_struct_ref.db_code
_struct_ref.pdbx_db_accession
_struct_ref.pdbx_align_begin
_struct_ref.pdbx_seq_one_letter_code
_struct_ref.details
1 1 UNP CLK1_MOUSE P22518 1
;MRHSKRTYCPDWDERDWDYGTWRSSSSHKRKKRSHSSAREQKRCRYDHSKTTDSYYLESRSINEKAYHSR
RYVDEYRNDYMGYEPGHPYGEPGSRYQMHSSKSSGRSGRSSYKSKHRSRHHTSQHHSHGMKLLIL
;
'Dual specificity protein kinase CLK1'
#
#
loop_
_struct_ref_seq.align_id
_struct_ref_seq.ref_id
_struct_ref_seq.seq_align_beg
_struct_ref_seq.seq_align_end
_struct_ref_seq.db_align_beg
_struct_ref_seq.db_align_end
1 1 1 135 1 135
#
#
loop_
_ma_target_ref_db_details.target_entity_id
_ma_target_ref_db_details.db_name
_ma_target_ref_db_details.db_name_other_details
_ma_target_ref_db_details.db_code
_ma_target_ref_db_details.db_accession
_ma_target_ref_db_details.seq_db_isoform
_ma_target_ref_db_details.seq_db_align_begin
_ma_target_ref_db_details.seq_db_align_end
_ma_target_ref_db_details.ncbi_taxonomy_id
_ma_target_ref_db_details.organism_scientific
_ma_target_ref_db_details.seq_db_sequence_version_date
_ma_target_ref_db_details.seq_db_sequence_checksum
1 UNP . CLK1_MOUSE P22518 P22518-2 1 135 10090 'Mus musculus (Mouse)' 2011-07-27
44BBA47A5D09705A
#
#
loop_
_entity_poly.entity_id
_entity_poly.type
_entity_poly.nstd_linkage
_entity_poly.nstd_monomer
_entity_poly.pdbx_strand_id
_entity_poly.pdbx_seq_one_letter_code
_entity_poly.pdbx_seq_one_letter_code_can
1 polypeptide(L) no no a
;MRHSKRTYCPDWDERDWDYGTWRSSSSHKRKKRSHSSAREQKRCRYDHSKTTDSYYLESRSINEKAYHSR
RYVDEYRNDYMGYEPGHPYGEPGSRYQMHSSKSSGRSGRSSYKSKHRSRHHTSQHHSHGMKLLIL
;

;MRHSKRTYCPDWDERDWDYGTWRSSSSHKRKKRSHSSAREQKRCRYDHSKTTDSYYLESRSINEKAYHSR
RYVDEYRNDYMGYEPGHPYGEPGSRYQMHSSKSSGRSGRSSYKSKHRSRHHTSQHHSHGMKLLIL
;

#
#
loop_
_entity_poly_seq.entity_id
_entity_poly_seq.num
_entity_poly_seq.mon_id
_entity_poly_seq.hetero
1 1 MET .
1 2 ARG .
1 3 HIS .
1 4 SER .
1 5 LYS .
1 6 ARG .
1 7 THR .
1 8 TYR .
1 9 CYS .
1 10 PRO .
1 11 ASP .
1 12 TRP .
1 13 ASP .
1 14 GLU .
1 15 ARG .
1 16 ASP .
1 17 TRP .
1 18 ASP .
1 19 TYR .
1 20 GLY .
1 21 THR .
1 22 TRP .
1 23 ARG .
1 24 SER .
1 25 SER .
1 26 SER .
1 27 SER .
1 28 HIS .
1 29 LYS .
1 30 ARG .
1 31 LYS .
1 32 LYS .
1 33 ARG .
1 34 SER .
1 35 HIS .
1 36 SER .
1 37 SER .
1 38 ALA .
1 39 ARG .
1 40 GLU .
1 41 GLN .
1 42 LYS .
1 43 ARG .
1 44 CYS .
1 45 ARG .
1 46 TYR .
1 47 ASP .
1 48 HIS .
1 49 SER .
1 50 LYS .
1 51 THR .
1 52 THR .
1 53 ASP .
1 54 SER .
1 55 TYR .
1 56 TYR .
1 57 LEU .
1 58 GLU .
1 59 SER .
1 60 ARG .
1 61 SER .
1 62 ILE .
1 63 ASN .
1 64 GLU .
1 65 LYS .
1 66 ALA .
1 67 TYR .
1 68 HIS .
1 69 SER .
1 70 ARG .
1 71 ARG .
1 72 TYR .
1 73 VAL .
1 74 ASP .
1 75 GLU .
1 76 TYR .
1 77 ARG .
1 78 ASN .
1 79 ASP .
1 80 TYR .
1 81 MET .
1 82 GLY .
1 83 TYR .
1 84 GLU .
1 85 PRO .
1 86 GLY .
1 87 HIS .
1 88 PRO .
1 89 TYR .
1 90 GLY .
1 91 GLU .
1 92 PRO .
1 93 GLY .
1 94 SER .
1 95 ARG .
1 96 TYR .
1 97 GLN .
1 98 MET .
1 99 HIS .
1 100 SER .
1 101 SER .
1 102 LYS .
1 103 SER .
1 104 SER .
1 105 GLY .
1 106 ARG .
1 107 SER .
1 108 GLY .
1 109 ARG .
1 110 SER .
1 111 SER .
1 112 TYR .
1 113 LYS .
1 114 SER .
1 115 LYS .
1 116 HIS .
1 117 ARG .
1 118 SER .
1 119 ARG .
1 120 HIS .
1 121 HIS .
1 122 THR .
1 123 SER .
1 124 GLN .
1 125 HIS .
1 126 HIS .
1 127 SER .
1 128 HIS .
1 129 GLY .
1 130 MET .
1 131 LYS .
1 132 LEU .
1 133 LEU .
1 134 ILE .
1 135 LEU .
#
#
loop_
_struct_asym.id
_struct_asym.entity_id
_struct_asym.details
A 1 .
#
#
loop_
_pdbx_poly_seq_scheme.asym_id
_pdbx_poly_seq_scheme.entity_id
_pdbx_poly_seq_scheme.seq_id
_pdbx_poly_seq_scheme.mon_id
_pdbx_poly_seq_scheme.pdb_seq_num
_pdbx_poly_seq_scheme.auth_seq_num
_pdbx_poly_seq_scheme.pdb_mon_id
_pdbx_poly_seq_scheme.auth_mon_id
_pdbx_poly_seq_scheme.pdb_strand_id
_pdbx_poly_seq_scheme.pdb_ins_code
A 1 1 MET 1 ? ? ? a .
A 1 2 ARG 2 ? ? ? a .
A 1 3 HIS 3 ? ? ? a .
A 1 4 SER 4 ? ? ? a .
A 1 5 LYS 5 ? ? ? a .
A 1 6 ARG 6 ? ? ? a .
A 1 7 THR 7 ? ? ? a .
A 1 8 TYR 8 ? ? ? a .
A 1 9 CYS 9 ? ? ? a .
A 1 10 PRO 10 ? ? ? a .
A 1 11 ASP 11 ? ? ? a .
A 1 12 TRP 12 ? ? ? a .
A 1 13 ASP 13 ? ? ? a .
A 1 14 GLU 14 ? ? ? a .
A 1 15 ARG 15 ? ? ? a .
A 1 16 ASP 16 ? ? ? a .
A 1 17 TRP 17 ? ? ? a .
A 1 18 ASP 18 ? ? ? a .
A 1 19 TYR 19 ? ? ? a .
A 1 20 GLY 20 ? ? ? a .
A 1 21 THR 21 ? ? ? a .
A 1 22 TRP 22 ? ? ? a .
A 1 23 ARG 23 ? ? ? a .
A 1 24 SER 24 ? ? ? a .
A 1 25 SER 25 ? ? ? a .
A 1 26 SER 26 ? ? ? a .
A 1 27 SER 27 ? ? ? a .
A 1 28 HIS 28 ? ? ? a .
A 1 29 LYS 29 ? ? ? a .
A 1 30 ARG 30 ? ? ? a .
A 1 31 LYS 31 ? ? ? a .
A 1 32 LYS 32 ? ? ? a .
A 1 33 ARG 33 ? ? ? a .
A 1 34 SER 34 ? ? ? a .
A 1 35 HIS 35 ? ? ? a .
A 1 36 SER 36 ? ? ? a .
A 1 37 SER 37 ? ? ? a .
A 1 38 ALA 38 ? ? ? a .
A 1 39 ARG 39 ? ? ? a .
A 1 40 GLU 40 ? ? ? a .
A 1 41 GLN 41 ? ? ? a .
A 1 42 LYS 42 ? ? ? a .
A 1 43 ARG 43 ? ? ? a .
A 1 44 CYS 44 ? ? ? a .
A 1 45 ARG 45 ? ? ? a .
A 1 46 TYR 46 ? ? ? a .
A 1 47 ASP 47 ? ? ? a .
A 1 48 HIS 48 ? ? ? a .
A 1 49 SER 49 ? ? ? a .
A 1 50 LYS 50 ? ? ? a .
A 1 51 THR 51 ? ? ? a .
A 1 52 THR 52 ? ? ? a .
A 1 53 ASP 53 ? ? ? a .
A 1 54 SER 54 ? ? ? a .
A 1 55 TYR 55 ? ? ? a .
A 1 56 TYR 56 ? ? ? a .
A 1 57 LEU 57 ? ? ? a .
A 1 58 GLU 58 ? ? ? a .
A 1 59 SER 59 ? ? ? a .
A 1 60 ARG 60 ? ? ? a .
A 1 61 SER 61 61 SER SER a .
A 1 62 ILE 62 62 ILE ILE a .
A 1 63 ASN 63 63 ASN ASN a .
A 1 64 GLU 64 64 GLU GLU a .
A 1 65 LYS 65 65 LYS LYS a .
A 1 66 ALA 66 66 ALA ALA a .
A 1 67 TYR 67 67 TYR TYR a .
A 1 68 HIS 68 68 HIS HIS a .
A 1 69 SER 69 69 SER SER a .
A 1 70 ARG 70 70 ARG ARG a .
A 1 71 ARG 71 71 ARG ARG a .
A 1 72 TYR 72 72 TYR TYR a .
A 1 73 VAL 73 73 VAL VAL a .
A 1 74 ASP 74 74 ASP ASP a .
A 1 75 GLU 75 75 GLU GLU a .
A 1 76 TYR 76 76 TYR TYR a .
A 1 77 ARG 77 ? ? ? a .
A 1 78 ASN 78 ? ? ? a .
A 1 79 ASP 79 ? ? ? a .
A 1 80 TYR 80 ? ? ? a .
A 1 81 MET 81 ? ? ? a .
A 1 82 GLY 82 ? ? ? a .
A 1 83 TYR 83 ? ? ? a .
A 1 84 GLU 84 ? ? ? a .
A 1 85 PRO 85 ? ? ? a .
A 1 86 GLY 86 ? ? ? a .
A 1 87 HIS 87 ? ? ? a .
A 1 88 PRO 88 ? ? ? a .
A 1 89 TYR 89 ? ? ? a .
A 1 90 GLY 90 ? ? ? a .
A 1 91 GLU 91 ? ? ? a .
A 1 92 PRO 92 ? ? ? a .
A 1 93 GLY 93 ? ? ? a .
A 1 94 SER 94 ? ? ? a .
A 1 95 ARG 95 ? ? ? a .
A 1 96 TYR 96 ? ? ? a .
A 1 97 GLN 97 ? ? ? a .
A 1 98 MET 98 ? ? ? a .
A 1 99 HIS 99 ? ? ? a .
A 1 100 SER 100 ? ? ? a .
A 1 101 SER 101 ? ? ? a .
A 1 102 LYS 102 ? ? ? a .
A 1 103 SER 103 ? ? ? a .
A 1 104 SER 104 ? ? ? a .
A 1 105 GLY 105 ? ? ? a .
A 1 106 ARG 106 ? ? ? a .
A 1 107 SER 107 ? ? ? a .
A 1 108 GLY 108 ? ? ? a .
A 1 109 ARG 109 ? ? ? a .
A 1 110 SER 110 ? ? ? a .
A 1 111 SER 111 ? ? ? a .
A 1 112 TYR 112 ? ? ? a .
A 1 113 LYS 113 ? ? ? a .
A 1 114 SER 114 ? ? ? a .
A 1 115 LYS 115 ? ? ? a .
A 1 116 HIS 116 ? ? ? a .
A 1 117 ARG 117 ? ? ? a .
A 1 118 SER 118 ? ? ? a .
A 1 119 ARG 119 ? ? ? a .
A 1 120 HIS 120 ? ? ? a .
A 1 121 HIS 121 ? ? ? a .
A 1 122 THR 122 ? ? ? a .
A 1 123 SER 123 ? ? ? a .
A 1 124 GLN 124 ? ? ? a .
A 1 125 HIS 125 ? ? ? a .
A 1 126 HIS 126 ? ? ? a .
A 1 127 SER 127 ? ? ? a .
A 1 128 HIS 128 ? ? ? a .
A 1 129 GLY 129 ? ? ? a .
A 1 130 MET 130 ? ? ? a .
A 1 131 LYS 131 ? ? ? a .
A 1 132 LEU 132 ? ? ? a .
A 1 133 LEU 133 ? ? ? a .
A 1 134 ILE 134 ? ? ? a .
A 1 135 LEU 135 ? ? ? a .
#
#
loop_
_ma_data.id
_ma_data.name
_ma_data.content_type
_ma_data.content_type_other_details
1
'Mitochondrial ribosomal protein S14 {PDB ID=7pkq, label_asym_id=KA, auth_asym_id=n, SMTL ID=7pkq.1.a}'
'template structure' .
2 . target .
3 'Target-template alignment by HHblits to 7pkq, label_asym_id=KA'
'target-template alignment' .
4 'model 1' 'model coordinates' .
5 SMTL 'reference database' .
6 PDB 'reference database' .
7 'Template search output' other 'Results of the sequence search'
#
#
loop_
_ma_data_group.ordinal_id
_ma_data_group.group_id
_ma_data_group.data_id
1 1 2
2 1 5
3 1 6
4 2 7
5 3 2
6 3 1
7 3 3
8 4 1
9 4 3
10 5 4
#
#
loop_
_ma_data_ref_db.data_id
_ma_data_ref_db.name
_ma_data_ref_db.location_url
_ma_data_ref_db.version
_ma_data_ref_db.release_date
5 SMTL https://swissmodel.expasy.org/templates/ . 2024-12-25
6 PDB https://www.wwpdb.org . 2024-12-20
#
#
loop_
_ma_target_entity.entity_id
_ma_target_entity.data_id
_ma_target_entity.origin
1 2 'reference database'
#
#
loop_
_ma_target_entity_instance.asym_id
_ma_target_entity_instance.entity_id
_ma_target_entity_instance.details
A 1 .
#
#
loop_
_ma_template_trans_matrix.id
_ma_template_trans_matrix.rot_matrix[1][1]
_ma_template_trans_matrix.rot_matrix[2][1]
_ma_template_trans_matrix.rot_matrix[3][1]
_ma_template_trans_matrix.rot_matrix[1][2]
_ma_template_trans_matrix.rot_matrix[2][2]
_ma_template_trans_matrix.rot_matrix[3][2]
_ma_template_trans_matrix.rot_matrix[1][3]
_ma_template_trans_matrix.rot_matrix[2][3]
_ma_template_trans_matrix.rot_matrix[3][3]
_ma_template_trans_matrix.tr_vector[1]
_ma_template_trans_matrix.tr_vector[2]
_ma_template_trans_matrix.tr_vector[3]
1 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000
1.000000 0 0 0
#
#
loop_
_ma_template_details.ordinal_id
_ma_template_details.template_id
_ma_template_details.template_origin
_ma_template_details.template_entity_type
_ma_template_details.template_trans_matrix_id
_ma_template_details.template_data_id
_ma_template_details.target_asym_id
_ma_template_details.template_label_asym_id
_ma_template_details.template_label_entity_id
_ma_template_details.template_model_num
_ma_template_details.template_auth_asym_id
1 1 'reference database' polymer 1 1 A KA 35 1 n
#
#
loop_
_ma_template_poly.template_id
_ma_template_poly.seq_one_letter_code
_ma_template_poly.seq_one_letter_code_can
1
;MKFRLPQYAYIIGTRGNVKDHMRRMLVEQHEVDRSVFKAVTTDKSVPLEHRLQVQRLFETEVPRDSAANR
VVNRCVLTGRARGVHRFARLSRIMIRQLAHSGFLPGVSKASW
;

;MKFRLPQYAYIIGTRGNVKDHMRRMLVEQHEVDRSVFKAVTTDKSVPLEHRLQVQRLFETEVPRDSAANR
VVNRCVLTGRARGVHRFARLSRIMIRQLAHSGFLPGVSKASW
;

#
#
loop_
_ma_template_poly_segment.id
_ma_template_poly_segment.template_id
_ma_template_poly_segment.residue_number_begin
_ma_template_poly_segment.residue_number_end
1 1 4 30
#
#
loop_
_ma_template_ref_db_details.template_id
_ma_template_ref_db_details.db_name
_ma_template_ref_db_details.db_name_other_details
_ma_template_ref_db_details.db_accession_code
_ma_template_ref_db_details.db_version_date
1 PDB . 7pkq 2024-07-17
#
#
loop_
_ma_target_template_poly_mapping.id
_ma_target_template_poly_mapping.template_segment_id
_ma_target_template_poly_mapping.target_asym_id
_ma_target_template_poly_mapping.target_seq_id_begin
_ma_target_template_poly_mapping.target_seq_id_end
1 1 A 1 135
#
#
loop_
_ma_alignment_info.alignment_id
_ma_alignment_info.data_id
_ma_alignment_info.software_group_id
_ma_alignment_info.alignment_length
_ma_alignment_info.alignment_type
_ma_alignment_info.alignment_mode
1 3 1 135 'target-template pairwise alignment' local
#
#
loop_
_ma_alignment_details.ordinal_id
_ma_alignment_details.alignment_id
_ma_alignment_details.template_segment_id
_ma_alignment_details.target_asym_id
_ma_alignment_details.score_type
_ma_alignment_details.score_type_other_details
_ma_alignment_details.score_value
_ma_alignment_details.percent_sequence_identity
_ma_alignment_details.sequence_identity_denominator
_ma_alignment_details.sequence_identity_denominator_other_details
1 1 1 A 'HHblits e-value' . 420.000 18.519
'Number of aligned residue pairs (not including the gaps)' .
#
#
loop_
_ma_alignment.ordinal_id
_ma_alignment.alignment_id
_ma_alignment.target_template_flag
_ma_alignment.sequence
1 1 1
MRHSKRTYCPDWDERDWDYGTWRSSSSHKRKKRSHSSAREQKRCRYDHSKTTDSYYLESRSINEKAYHSRRYVDEYRNDYMGYEPGHPYGEPGSRYQMHSSKSSGRSGRSSYKSKHRSRHHTSQHHSHGMKLLIL
2 1 2
-------------------------------------------------RLPQYAYIIGTRGNVKDHMRRMLVEQH-----------------------------------------------------------
#
#
loop_
_ma_protocol_step.ordinal_id
_ma_protocol_step.protocol_id
_ma_protocol_step.step_id
_ma_protocol_step.method_type
_ma_protocol_step.step_name
_ma_protocol_step.details
_ma_protocol_step.software_group_id
_ma_protocol_step.input_data_group_id
_ma_protocol_step.output_data_group_id
1 1 1 'template search' 'template search' 'SWISS-MODEL template search in PDB' 2
1 2
2 1 2 'template selection' 'template selection'
'Automatic template selection by SWISS-MODEL {QSQE=0.000}' 3 2 4
3 1 3 modeling 'homology modeling'
'SWISS-MODEL auto-model mode using ProMod3 on 7pkq.1' 4 3 5
#
#
loop_
_ma_model_list.ordinal_id
_ma_model_list.model_id
_ma_model_list.model_group_id
_ma_model_list.model_name
_ma_model_list.model_group_name
_ma_model_list.data_id
_ma_model_list.model_type
_ma_model_list.model_type_other_details
1 1 1 'model 1' . 4 'Homology model' .
#
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_alt_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.auth_seq_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.label_entity_id
_atom_site.auth_asym_id
_atom_site.auth_comp_id
_atom_site.B_iso_or_equiv
_atom_site.pdbx_PDB_model_num
ATOM 1 N N . SER 61 61 ? A 174.882 223.551 243.994 1 1 a SER 0.240 1
ATOM 2 C CA . SER 61 61 ? A 173.478 223.769 244.505 1 1 a SER 0.240 1
ATOM 3 C C . SER 61 61 ? A 173.480 224.814 245.617 1 1 a SER 0.240 1
ATOM 4 O O . SER 61 61 ? A 174.291 225.734 245.563 1 1 a SER 0.240 1
ATOM 5 C CB . SER 61 61 ? A 172.852 222.414 244.967 1 1 a SER 0.240 1
ATOM 6 O OG . SER 61 61 ? A 173.621 221.839 246.026 1 1 a SER 0.240 1
ATOM 7 N N . ILE 62 62 ? A 172.612 224.694 246.643 1 1 a ILE 0.270 1
ATOM 8 C CA . ILE 62 62 ? A 172.348 225.660 247.703 1 1 a ILE 0.270 1
ATOM 9 C C . ILE 62 62 ? A 173.294 225.596 248.908 1 1 a ILE 0.270 1
ATOM 10 O O . ILE 62 62 ? A 172.845 225.580 250.060 1 1 a ILE 0.270 1
ATOM 11 C CB . ILE 62 62 ? A 170.900 225.496 248.182 1 1 a ILE 0.270 1
ATOM 12 C CG1 . ILE 62 62 ? A 170.545 224.057 248.659 1 1 a ILE 0.270 1
ATOM 13 C CG2 . ILE 62 62 ? A 169.978 225.954 247.033 1 1 a ILE 0.270 1
ATOM 14 C CD1 . ILE 62 62 ? A 169.239 224.055 249.472 1 1 a ILE 0.270 1
ATOM 15 N N . ASN 63 63 ? A 174.632 225.620 248.693 1 1 a ASN 0.590 1
ATOM 16 C CA . ASN 63 63 ? A 175.633 225.602 249.762 1 1 a ASN 0.590 1
ATOM 17 C C . ASN 63 63 ? A 175.428 226.777 250.745 1 1 a ASN 0.590 1
ATOM 18 O O . ASN 63 63 ? A 175.366 226.621 251.967 1 1 a ASN 0.590 1
ATOM 19 C CB . ASN 63 63 ? A 177.057 225.599 249.113 1 1 a ASN 0.590 1
ATOM 20 C CG . ASN 63 63 ? A 178.151 225.311 250.143 1 1 a ASN 0.590 1
ATOM 21 O OD1 . ASN 63 63 ? A 177.886 224.891 251.267 1 1 a ASN 0.590 1
ATOM 22 N ND2 . ASN 63 63 ? A 179.437 225.499 249.757 1 1 a ASN 0.590 1
ATOM 23 N N . GLU 64 64 ? A 175.190 227.986 250.210 1 1 a GLU 0.630 1
ATOM 24 C CA . GLU 64 64 ? A 174.967 229.197 250.976 1 1 a GLU 0.630 1
ATOM 25 C C . GLU 64 64 ? A 173.731 229.249 251.863 1 1 a GLU 0.630 1
ATOM 26 O O . GLU 64 64 ? A 173.730 229.934 252.892 1 1 a GLU 0.630 1
ATOM 27 C CB . GLU 64 64 ? A 174.968 230.395 250.028 1 1 a GLU 0.630 1
ATOM 28 C CG . GLU 64 64 ? A 176.359 230.620 249.399 1 1 a GLU 0.630 1
ATOM 29 C CD . GLU 64 64 ? A 176.363 231.873 248.532 1 1 a GLU 0.630 1
ATOM 30 O OE1 . GLU 64 64 ? A 175.272 232.470 248.349 1 1 a GLU 0.630 1
ATOM 31 O OE2 . GLU 64 64 ? A 177.470 232.235 248.066 1 1 a GLU 0.630 1
ATOM 32 N N . LYS 65 65 ? A 172.649 228.511 251.539 1 1 a LYS 0.660 1
ATOM 33 C CA . LYS 65 65 ? A 171.497 228.378 252.422 1 1 a LYS 0.660 1
ATOM 34 C C . LYS 65 65 ? A 171.852 227.671 253.731 1 1 a LYS 0.660 1
ATOM 35 O O . LYS 65 65 ? A 171.456 228.095 254.818 1 1 a LYS 0.660 1
ATOM 36 C CB . LYS 65 65 ? A 170.306 227.692 251.695 1 1 a LYS 0.660 1
ATOM 37 C CG . LYS 65 65 ? A 168.947 227.848 252.419 1 1 a LYS 0.660 1
ATOM 38 C CD . LYS 65 65 ? A 168.605 226.788 253.490 1 1 a LYS 0.660 1
ATOM 39 C CE . LYS 65 65 ? A 168.419 225.381 252.912 1 1 a LYS 0.660 1
ATOM 40 N NZ . LYS 65 65 ? A 168.147 224.391 253.981 1 1 a LYS 0.660 1
ATOM 41 N N . ALA 66 66 ? A 172.664 226.594 253.670 1 1 a ALA 0.710 1
ATOM 42 C CA . ALA 66 66 ? A 173.205 225.909 254.833 1 1 a ALA 0.710 1
ATOM 43 C C . ALA 66 66 ? A 174.203 226.753 255.618 1 1 a ALA 0.710 1
ATOM 44 O O . ALA 66 66 ? A 174.302 226.644 256.843 1 1 a ALA 0.710 1
ATOM 45 C CB . ALA 66 66 ? A 173.884 224.593 254.413 1 1 a ALA 0.710 1
ATOM 46 N N . TYR 67 67 ? A 174.965 227.633 254.939 1 1 a TYR 0.620 1
ATOM 47 C CA . TYR 67 67 ? A 175.727 228.689 255.591 1 1 a TYR 0.620 1
ATOM 48 C C . TYR 67 67 ? A 174.851 229.694 256.331 1 1 a TYR 0.620 1
ATOM 49 O O . TYR 67 67 ? A 175.197 230.100 257.435 1 1 a TYR 0.620 1
ATOM 50 C CB . TYR 67 67 ? A 176.703 229.439 254.642 1 1 a TYR 0.620 1
ATOM 51 C CG . TYR 67 67 ? A 177.804 228.546 254.122 1 1 a TYR 0.620 1
ATOM 52 C CD1 . TYR 67 67 ? A 178.441 227.581 254.934 1 1 a TYR 0.620 1
ATOM 53 C CD2 . TYR 67 67 ? A 178.269 228.735 252.808 1 1 a TYR 0.620 1
ATOM 54 C CE1 . TYR 67 67 ? A 179.478 226.788 254.417 1 1 a TYR 0.620 1
ATOM 55 C CE2 . TYR 67 67 ? A 179.309 227.950 252.294 1 1 a TYR 0.620 1
ATOM 56 C CZ . TYR 67 67 ? A 179.904 226.969 253.097 1 1 a TYR 0.620 1
ATOM 57 O OH . TYR 67 67 ? A 180.970 226.199 252.589 1 1 a TYR 0.620 1
ATOM 58 N N . HIS 68 68 ? A 173.682 230.101 255.796 1 1 a HIS 0.610 1
ATOM 59 C CA . HIS 68 68 ? A 172.706 230.902 256.534 1 1 a HIS 0.610 1
ATOM 60 C C . HIS 68 68 ? A 172.166 230.215 257.776 1 1 a HIS 0.610 1
ATOM 61 O O . HIS 68 68 ? A 172.067 230.818 258.843 1 1 a HIS 0.610 1
ATOM 62 C CB . HIS 68 68 ? A 171.504 231.302 255.653 1 1 a HIS 0.610 1
ATOM 63 C CG . HIS 68 68 ? A 170.788 232.502 256.184 1 1 a HIS 0.610 1
ATOM 64 N ND1 . HIS 68 68 ? A 171.389 233.743 256.058 1 1 a HIS 0.610 1
ATOM 65 C CD2 . HIS 68 68 ? A 169.572 232.612 256.787 1 1 a HIS 0.610 1
ATOM 66 C CE1 . HIS 68 68 ? A 170.516 234.593 256.582 1 1 a HIS 0.610 1
ATOM 67 N NE2 . HIS 68 68 ? A 169.410 233.957 257.034 1 1 a HIS 0.610 1
ATOM 68 N N . SER 69 69 ? A 171.860 228.909 257.682 1 1 a SER 0.620 1
ATOM 69 C CA . SER 69 69 ? A 171.528 228.085 258.839 1 1 a SER 0.620 1
ATOM 70 C C . SER 69 69 ? A 172.651 228.031 259.857 1 1 a SER 0.620 1
ATOM 71 O O . SER 69 69 ? A 172.414 228.195 261.049 1 1 a SER 0.620 1
ATOM 72 C CB . SER 69 69 ? A 171.229 226.601 258.486 1 1 a SER 0.620 1
ATOM 73 O OG . SER 69 69 ? A 170.186 226.467 257.516 1 1 a SER 0.620 1
ATOM 74 N N . ARG 70 70 ? A 173.915 227.850 259.417 1 1 a ARG 0.550 1
ATOM 75 C CA . ARG 70 70 ? A 175.094 227.923 260.272 1 1 a ARG 0.550 1
ATOM 76 C C . ARG 70 70 ? A 175.246 229.277 260.946 1 1 a ARG 0.550 1
ATOM 77 O O . ARG 70 70 ? A 175.370 229.363 262.161 1 1 a ARG 0.550 1
ATOM 78 C CB . ARG 70 70 ? A 176.383 227.581 259.469 1 1 a ARG 0.550 1
ATOM 79 C CG . ARG 70 70 ? A 177.221 226.473 260.138 1 1 a ARG 0.550 1
ATOM 80 C CD . ARG 70 70 ? A 176.559 225.087 260.154 1 1 a ARG 0.550 1
ATOM 81 N NE . ARG 70 70 ? A 176.616 224.555 258.739 1 1 a ARG 0.550 1
ATOM 82 C CZ . ARG 70 70 ? A 177.629 223.817 258.258 1 1 a ARG 0.550 1
ATOM 83 N NH1 . ARG 70 70 ? A 177.594 223.362 257.006 1 1 a ARG 0.550 1
ATOM 84 N NH2 . ARG 70 70 ? A 178.700 223.544 258.998 1 1 a ARG 0.550 1
ATOM 85 N N . ARG 71 71 ? A 175.105 230.381 260.196 1 1 a ARG 0.500 1
ATOM 86 C CA . ARG 71 71 ? A 175.082 231.717 260.756 1 1 a ARG 0.500 1
ATOM 87 C C . ARG 71 71 ? A 173.974 231.924 261.782 1 1 a ARG 0.500 1
ATOM 88 O O . ARG 71 71 ? A 174.189 232.592 262.776 1 1 a ARG 0.500 1
ATOM 89 C CB . ARG 71 71 ? A 174.984 232.806 259.660 1 1 a ARG 0.500 1
ATOM 90 C CG . ARG 71 71 ? A 176.251 232.919 258.784 1 1 a ARG 0.500 1
ATOM 91 C CD . ARG 71 71 ? A 176.236 234.149 257.867 1 1 a ARG 0.500 1
ATOM 92 N NE . ARG 71 71 ? A 175.056 234.019 256.929 1 1 a ARG 0.500 1
ATOM 93 C CZ . ARG 71 71 ? A 175.102 233.516 255.686 1 1 a ARG 0.500 1
ATOM 94 N NH1 . ARG 71 71 ? A 176.196 232.947 255.193 1 1 a ARG 0.500 1
ATOM 95 N NH2 . ARG 71 71 ? A 174.004 233.546 254.924 1 1 a ARG 0.500 1
ATOM 96 N N . TYR 72 72 ? A 172.779 231.332 261.614 1 1 a TYR 0.490 1
ATOM 97 C CA . TYR 72 72 ? A 171.735 231.414 262.625 1 1 a TYR 0.490 1
ATOM 98 C C . TYR 72 72 ? A 172.024 230.572 263.890 1 1 a TYR 0.490 1
ATOM 99 O O . TYR 72 72 ? A 171.519 230.888 264.965 1 1 a TYR 0.490 1
ATOM 100 C CB . TYR 72 72 ? A 170.387 231.018 261.963 1 1 a TYR 0.490 1
ATOM 101 C CG . TYR 72 72 ? A 169.224 231.299 262.878 1 1 a TYR 0.490 1
ATOM 102 C CD1 . TYR 72 72 ? A 168.561 230.236 263.518 1 1 a TYR 0.490 1
ATOM 103 C CD2 . TYR 72 72 ? A 168.834 232.623 263.155 1 1 a TYR 0.490 1
ATOM 104 C CE1 . TYR 72 72 ? A 167.487 230.489 264.383 1 1 a TYR 0.490 1
ATOM 105 C CE2 . TYR 72 72 ? A 167.759 232.878 264.022 1 1 a TYR 0.490 1
ATOM 106 C CZ . TYR 72 72 ? A 167.075 231.806 264.616 1 1 a TYR 0.490 1
ATOM 107 O OH . TYR 72 72 ? A 165.976 232.045 265.465 1 1 a TYR 0.490 1
ATOM 108 N N . VAL 73 73 ? A 172.859 229.508 263.802 1 1 a VAL 0.540 1
ATOM 109 C CA . VAL 73 73 ? A 173.396 228.746 264.945 1 1 a VAL 0.540 1
ATOM 110 C C . VAL 73 73 ? A 174.403 229.563 265.775 1 1 a VAL 0.540 1
ATOM 111 O O . VAL 73 73 ? A 174.578 229.312 266.965 1 1 a VAL 0.540 1
ATOM 112 C CB . VAL 73 73 ? A 174.048 227.409 264.507 1 1 a VAL 0.540 1
ATOM 113 C CG1 . VAL 73 73 ? A 174.689 226.640 265.687 1 1 a VAL 0.540 1
ATOM 114 C CG2 . VAL 73 73 ? A 172.999 226.470 263.876 1 1 a VAL 0.540 1
ATOM 115 N N . ASP 74 74 ? A 175.102 230.529 265.135 1 1 a ASP 0.500 1
ATOM 116 C CA . ASP 74 74 ? A 176.125 231.357 265.765 1 1 a ASP 0.500 1
ATOM 117 C C . ASP 74 74 ? A 175.737 232.857 265.965 1 1 a ASP 0.500 1
ATOM 118 O O . ASP 74 74 ? A 176.431 233.594 266.662 1 1 a ASP 0.500 1
ATOM 119 C CB . ASP 74 74 ? A 177.396 231.309 264.858 1 1 a ASP 0.500 1
ATOM 120 C CG . ASP 74 74 ? A 177.998 229.911 264.705 1 1 a ASP 0.500 1
ATOM 121 O OD1 . ASP 74 74 ? A 178.329 229.268 265.734 1 1 a ASP 0.500 1
ATOM 122 O OD2 . ASP 74 74 ? A 178.200 229.499 263.529 1 1 a ASP 0.500 1
ATOM 123 N N . GLU 75 75 ? A 174.648 233.367 265.327 1 1 a GLU 0.300 1
ATOM 124 C CA . GLU 75 75 ? A 174.050 234.701 265.541 1 1 a GLU 0.300 1
ATOM 125 C C . GLU 75 75 ? A 173.098 234.732 266.736 1 1 a GLU 0.300 1
ATOM 126 O O . GLU 75 75 ? A 173.104 235.681 267.543 1 1 a GLU 0.300 1
ATOM 127 C CB . GLU 75 75 ? A 173.242 235.168 264.289 1 1 a GLU 0.300 1
ATOM 128 C CG . GLU 75 75 ? A 172.614 236.590 264.394 1 1 a GLU 0.300 1
ATOM 129 C CD . GLU 75 75 ? A 171.797 237.019 263.170 1 1 a GLU 0.300 1
ATOM 130 O OE1 . GLU 75 75 ? A 171.684 236.234 262.193 1 1 a GLU 0.300 1
ATOM 131 O OE2 . GLU 75 75 ? A 171.268 238.161 263.216 1 1 a GLU 0.300 1
ATOM 132 N N . TYR 76 76 ? A 172.258 233.692 266.869 1 1 a TYR 0.260 1
ATOM 133 C CA . TYR 76 76 ? A 171.594 233.277 268.095 1 1 a TYR 0.260 1
ATOM 134 C C . TYR 76 76 ? A 172.435 232.159 268.804 1 1 a TYR 0.260 1
ATOM 135 O O . TYR 76 76 ? A 173.431 231.690 268.191 1 1 a TYR 0.260 1
ATOM 136 C CB . TYR 76 76 ? A 170.160 232.767 267.749 1 1 a TYR 0.260 1
ATOM 137 C CG . TYR 76 76 ? A 169.374 232.483 269.002 1 1 a TYR 0.260 1
ATOM 138 C CD1 . TYR 76 76 ? A 169.128 231.159 269.413 1 1 a TYR 0.260 1
ATOM 139 C CD2 . TYR 76 76 ? A 168.992 233.545 269.840 1 1 a TYR 0.260 1
ATOM 140 C CE1 . TYR 76 76 ? A 168.491 230.900 270.637 1 1 a TYR 0.260 1
ATOM 141 C CE2 . TYR 76 76 ? A 168.356 233.291 271.065 1 1 a TYR 0.260 1
ATOM 142 C CZ . TYR 76 76 ? A 168.092 231.967 271.452 1 1 a TYR 0.260 1
ATOM 143 O OH . TYR 76 76 ? A 167.452 231.702 272.681 1 1 a TYR 0.260 1
ATOM 144 O OXT . TYR 76 76 ? A 172.093 231.789 269.958 1 1 a TYR 0.260 1
#
#
loop_
_atom_type.symbol
C
N
O
#
#
loop_
_ma_qa_metric.id
_ma_qa_metric.name
_ma_qa_metric.description
_ma_qa_metric.type
_ma_qa_metric.mode
_ma_qa_metric.type_other_details
_ma_qa_metric.software_group_id
1 QMEANDisCo 'Predicted accuracy according to all-atom lDDT in [0,1].'
'pLDDT all-atom in [0,1]' local . 5
2 QMEANDisCo 'Predicted accuracy according to all-atom lDDT in [0,1].'
'pLDDT all-atom in [0,1]' global . 5
3 GMQE
'Global Model Quality Estimate of the model accuracy, calculated by SWISS-MODEL.'
'normalized score' global . 6
#
#
loop_
_ma_qa_metric_global.ordinal_id
_ma_qa_metric_global.model_id
_ma_qa_metric_global.metric_id
_ma_qa_metric_global.metric_value
1 1 2 0.506
2 1 3 0.044
#
#
loop_
_ma_qa_metric_local.ordinal_id
_ma_qa_metric_local.model_id
_ma_qa_metric_local.label_asym_id
_ma_qa_metric_local.label_seq_id
_ma_qa_metric_local.label_comp_id
_ma_qa_metric_local.metric_id
_ma_qa_metric_local.metric_value
1 1 A 61 SER 1 0.240
2 1 A 62 ILE 1 0.270
3 1 A 63 ASN 1 0.590
4 1 A 64 GLU 1 0.630
5 1 A 65 LYS 1 0.660
6 1 A 66 ALA 1 0.710
7 1 A 67 TYR 1 0.620
8 1 A 68 HIS 1 0.610
9 1 A 69 SER 1 0.620
10 1 A 70 ARG 1 0.550
11 1 A 71 ARG 1 0.500
12 1 A 72 TYR 1 0.490
13 1 A 73 VAL 1 0.540
14 1 A 74 ASP 1 0.500
15 1 A 75 GLU 1 0.300
16 1 A 76 TYR 1 0.260
#
#
loop_
_pdbx_data_usage.id
_pdbx_data_usage.type
_pdbx_data_usage.details
_pdbx_data_usage.url
1 license
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2 disclaimer
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