data_SMR-aedc80d4393dd764f05cc1dc1e8113b6_1 _entry.id SMR-aedc80d4393dd764f05cc1dc1e8113b6_1 _struct.entry_id SMR-aedc80d4393dd764f05cc1dc1e8113b6_1 _struct.pdbx_model_details ;This model was generated unsupervised by the SWISS-MODEL homology-modelling pipeline for the SWISS-MODEL Repository, a database of annotated 3D protein structure models. The modelled monomer covers following UniProtKB entries: - Q9D1Q4/ DPM3_MOUSE, Dolichol-phosphate mannosyltransferase subunit 3 Estimated model accuracy of this model is 0.089, calculated by SWISS-MODEL as Global Model Quality Estimate (GMQE). ; _struct.pdbx_structure_determination_methodology computational _struct.title 'Model for UniProtKB entries Q9D1Q4' _audit_conform.dict_location https://raw.githubusercontent.com/ihmwg/ModelCIF/d18ba38/base/mmcif_ma-core.dic _audit_conform.dict_name mmcif_ma.dic _audit_conform.dict_version 1.4.6 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary 'The SWISS-MODEL Repository - new features and functionality' 'Nucleic Acids Res.' 45 D313 D319 2017 27899672 10.1093/nar/gkw1132 2 'SWISS-MODEL: homology modelling of protein structures and complexes' 'Nucleic Acids Res.' 46 W296 W303 2018 29788355 10.1093/nar/gky427 3 'ProMod3 - A versatile homology modelling toolbox' 'PLoS Comput. Biol.' 17(1) 1 18 2021 33507980 10.1371/journal.pcbi.1008667 4 'QMEANDisCo - distance constraints applied on model quality estimation' Bioinformatics 36 1765 1771 2020 31697312 10.1093/bioinformatics/btz828 5 'OpenStructure: an integrated software framework for computational structural biology' 'Acta Crystallogr., Sect. D: Biol. Crystallogr.' 69 701 709 2013 23633579 10.1107/S0907444913007051 6 'BLAST+: architecture and applications' 'BMC Bioinf.' 10 421 . 2009 20003500 10.1186/1471-2105-10-421 7 'HH-suite3 for fast remote homology detection and deep protein annotation' 'BMC Bioinf.' 20 473 . 2019 31521110 10.1186/s12859-019-3019-7 # # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Bienert, S.' 1 primary 'Waterhouse, A.' 2 primary 'de Beer, T.A.P.' 3 primary 'Tauriello, G.' 4 primary 'Studer, G.' 5 primary 'Bordoli, L.' 6 primary 'Schwede, T.' 7 2 'Waterhouse, A.' 8 2 'Bertoni, M.' 9 2 'Bienert, S.' 10 2 'Studer, G.' 11 2 'Tauriello, G.' 12 2 'Gumienny, R.' 13 2 'Heer, F.T.' 14 2 'de Beer, T.A.P.' 15 2 'Rempfer, C.' 16 2 'Bordoli, L.' 17 2 'Lepore, R.' 18 2 'Schwede, T.' 19 3 'Studer, G.' 20 3 'Tauriello, G.' 21 3 'Bienert, S.' 22 3 'Biasini, M.' 23 3 'Johner, N.' 24 3 'Schwede, T.' 25 4 'Studer, G.' 26 4 'Rempfer, C.' 27 4 'Waterhouse, A.M.' 28 4 'Gumienny, R.' 29 4 'Haas, J.' 30 4 'Schwede, T.' 31 5 'Biasini, M.' 32 5 'Schmidt, T.' 33 5 'Bienert, S.' 34 5 'Mariani, V.' 35 5 'Studer, G.' 36 5 'Haas, J.' 37 5 'Johner, N.' 38 5 'Schenk, A.D.' 39 5 'Philippsen, A.' 40 5 'Schwede, T.' 41 6 'Camacho, C.' 42 6 'Coulouris, G.' 43 6 'Avagyan, V.' 44 6 'Ma, N.' 45 6 'Papadopoulos, J.' 46 6 'Bealer, K.' 47 6 'Madden, T.L.' 48 7 'Steinegger, M.' 49 7 'Meier, M.' 50 7 'Mirdita, M.' 51 7 'Vohringer, H.' 52 7 'Haunsberger, S.J.' 53 7 'Soding, J.' 54 # # loop_ _software.pdbx_ordinal _software.name _software.classification _software.description _software.version _software.type _software.location _software.citation_id 1 SWISS-MODEL 'model building' 'Homology modelling web service' 2024-10.3 package https://swissmodel.expasy.org 2 2 ProMod3 'model building' 'Modular homology modelling engine' 3.4.1 library https://git.scicore.unibas.ch/schwede/ProMod3 3 3 QMEAN 'model building' 'QMEAN - Qualitative Model Energy ANalysis' 4.3.1 library https://git.scicore.unibas.ch/schwede/QMEAN 4 4 OpenStructure 'data processing' 'Open-Source Computational Structural Biology Framework' 2.8.0 package https://openstructure.org/ 5 5 BLAST 'data collection' . 2.2.31 package https://blast.ncbi.nlm.nih.gov 6 6 HH-suite 'data collection' 'HH-suite3 for sensitive sequence searching' 3.2.0 package https://github.com/soedinglab/hh-suite 7 # # loop_ _ma_software_group.ordinal_id _ma_software_group.group_id _ma_software_group.software_id _ma_software_group.parameter_group_id 1 1 6 . 2 2 1 . 3 2 4 . 4 2 5 . 5 2 6 . 6 3 1 . 7 3 4 . 8 4 1 . 9 4 2 . 10 4 4 . 11 5 3 . 12 6 1 . 13 6 3 . 14 6 4 . # # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Bienert, S.' 1 'Waterhouse, A.' 2 'de Beer, T.A.P.' 3 'Tauriello, G.' 4 'Studer, G.' 5 'Bordoli, L.' 6 'Schwede, T.' 7 # # loop_ _chem_comp.id _chem_comp.type _chem_comp.name _chem_comp.formula _chem_comp.formula_weight _chem_comp.ma_provenance ALA 'L-peptide linking' ALANINE 'C3 H7 N O2' 89.094 'CCD Core' ARG 'L-peptide linking' ARGININE 'C6 H15 N4 O2 1' 175.212 'CCD Core' ASN 'L-peptide linking' ASPARAGINE 'C4 H8 N2 O3' 132.119 'CCD Core' ASP 'L-peptide linking' 'ASPARTIC ACID' 'C4 H7 N O4' 133.103 'CCD Core' CYS 'L-peptide linking' CYSTEINE 'C3 H7 N O2 S' 121.154 'CCD Core' GLN 'L-peptide linking' GLUTAMINE 'C5 H10 N2 O3' 146.146 'CCD Core' GLU 'L-peptide linking' 'GLUTAMIC ACID' 'C5 H9 N O4' 147.130 'CCD Core' GLY 'peptide linking' GLYCINE 'C2 H5 N O2' 75.067 'CCD Core' HIS 'L-peptide linking' HISTIDINE 'C6 H10 N3 O2 1' 156.165 'CCD Core' ILE 'L-peptide linking' ISOLEUCINE 'C6 H13 N O2' 131.175 'CCD Core' LEU 'L-peptide linking' LEUCINE 'C6 H13 N O2' 131.175 'CCD Core' LYS 'L-peptide linking' LYSINE 'C6 H15 N2 O2 1' 147.198 'CCD Core' MET 'L-peptide linking' METHIONINE 'C5 H11 N O2 S' 149.208 'CCD Core' PHE 'L-peptide linking' PHENYLALANINE 'C9 H11 N O2' 165.192 'CCD Core' PRO 'L-peptide linking' PROLINE 'C5 H9 N O2' 115.132 'CCD Core' SER 'L-peptide linking' SERINE 'C3 H7 N O3' 105.093 'CCD Core' THR 'L-peptide linking' THREONINE 'C4 H9 N O3' 119.120 'CCD Core' TRP 'L-peptide linking' TRYPTOPHAN 'C11 H12 N2 O2' 204.229 'CCD Core' TYR 'L-peptide linking' TYROSINE 'C9 H11 N O3' 181.191 'CCD Core' VAL 'L-peptide linking' VALINE 'C5 H11 N O2' 117.148 'CCD Core' # # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.details 1 polymer man . 11787.336 1 . # # loop_ _struct_ref.id _struct_ref.entity_id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_align_begin _struct_ref.pdbx_seq_one_letter_code _struct_ref.details 1 1 UNP DPM3_MOUSE Q9D1Q4 1 ;MTKLTQWLWGLALLGSAWAALTMGALGLELPFPCREVLWPLPAYLLVSAGCYALGTVGYRVATFHDCEDA ARELQSQIVEARADLARRGLRF ; 'Dolichol-phosphate mannosyltransferase subunit 3' # # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.seq_align_beg _struct_ref_seq.seq_align_end _struct_ref_seq.db_align_beg _struct_ref_seq.db_align_end 1 1 1 92 1 92 # # loop_ _ma_target_ref_db_details.target_entity_id _ma_target_ref_db_details.db_name _ma_target_ref_db_details.db_name_other_details _ma_target_ref_db_details.db_code _ma_target_ref_db_details.db_accession _ma_target_ref_db_details.seq_db_isoform _ma_target_ref_db_details.seq_db_align_begin _ma_target_ref_db_details.seq_db_align_end _ma_target_ref_db_details.ncbi_taxonomy_id _ma_target_ref_db_details.organism_scientific _ma_target_ref_db_details.seq_db_sequence_version_date _ma_target_ref_db_details.seq_db_sequence_checksum 1 UNP . DPM3_MOUSE Q9D1Q4 . 1 92 10090 'Mus musculus (Mouse)' 2001-06-01 B621E6E47337CC40 # # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_strand_id _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can 1 polypeptide(L) no no B ;MTKLTQWLWGLALLGSAWAALTMGALGLELPFPCREVLWPLPAYLLVSAGCYALGTVGYRVATFHDCEDA ARELQSQIVEARADLARRGLRF ; ;MTKLTQWLWGLALLGSAWAALTMGALGLELPFPCREVLWPLPAYLLVSAGCYALGTVGYRVATFHDCEDA ARELQSQIVEARADLARRGLRF ; # # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET . 1 2 THR . 1 3 LYS . 1 4 LEU . 1 5 THR . 1 6 GLN . 1 7 TRP . 1 8 LEU . 1 9 TRP . 1 10 GLY . 1 11 LEU . 1 12 ALA . 1 13 LEU . 1 14 LEU . 1 15 GLY . 1 16 SER . 1 17 ALA . 1 18 TRP . 1 19 ALA . 1 20 ALA . 1 21 LEU . 1 22 THR . 1 23 MET . 1 24 GLY . 1 25 ALA . 1 26 LEU . 1 27 GLY . 1 28 LEU . 1 29 GLU . 1 30 LEU . 1 31 PRO . 1 32 PHE . 1 33 PRO . 1 34 CYS . 1 35 ARG . 1 36 GLU . 1 37 VAL . 1 38 LEU . 1 39 TRP . 1 40 PRO . 1 41 LEU . 1 42 PRO . 1 43 ALA . 1 44 TYR . 1 45 LEU . 1 46 LEU . 1 47 VAL . 1 48 SER . 1 49 ALA . 1 50 GLY . 1 51 CYS . 1 52 TYR . 1 53 ALA . 1 54 LEU . 1 55 GLY . 1 56 THR . 1 57 VAL . 1 58 GLY . 1 59 TYR . 1 60 ARG . 1 61 VAL . 1 62 ALA . 1 63 THR . 1 64 PHE . 1 65 HIS . 1 66 ASP . 1 67 CYS . 1 68 GLU . 1 69 ASP . 1 70 ALA . 1 71 ALA . 1 72 ARG . 1 73 GLU . 1 74 LEU . 1 75 GLN . 1 76 SER . 1 77 GLN . 1 78 ILE . 1 79 VAL . 1 80 GLU . 1 81 ALA . 1 82 ARG . 1 83 ALA . 1 84 ASP . 1 85 LEU . 1 86 ALA . 1 87 ARG . 1 88 ARG . 1 89 GLY . 1 90 LEU . 1 91 ARG . 1 92 PHE . # # loop_ _struct_asym.id _struct_asym.entity_id _struct_asym.details A 1 . # # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code A 1 1 MET 1 ? ? ? B . A 1 2 THR 2 ? ? ? B . A 1 3 LYS 3 ? ? ? B . A 1 4 LEU 4 ? ? ? B . A 1 5 THR 5 ? ? ? B . A 1 6 GLN 6 ? ? ? B . A 1 7 TRP 7 ? ? ? B . A 1 8 LEU 8 ? ? ? B . A 1 9 TRP 9 ? ? ? B . A 1 10 GLY 10 ? ? ? B . A 1 11 LEU 11 ? ? ? B . A 1 12 ALA 12 ? ? ? B . A 1 13 LEU 13 ? ? ? B . A 1 14 LEU 14 ? ? ? B . A 1 15 GLY 15 ? ? ? B . A 1 16 SER 16 ? ? ? B . A 1 17 ALA 17 ? ? ? B . A 1 18 TRP 18 ? ? ? B . A 1 19 ALA 19 ? ? ? B . A 1 20 ALA 20 ? ? ? B . A 1 21 LEU 21 ? ? ? B . A 1 22 THR 22 ? ? ? B . A 1 23 MET 23 ? ? ? B . A 1 24 GLY 24 ? ? ? B . A 1 25 ALA 25 ? ? ? B . A 1 26 LEU 26 ? ? ? B . A 1 27 GLY 27 ? ? ? B . A 1 28 LEU 28 ? ? ? B . A 1 29 GLU 29 ? ? ? B . A 1 30 LEU 30 ? ? ? B . A 1 31 PRO 31 ? ? ? B . A 1 32 PHE 32 ? ? ? B . A 1 33 PRO 33 ? ? ? B . A 1 34 CYS 34 ? ? ? B . A 1 35 ARG 35 ? ? ? B . A 1 36 GLU 36 ? ? ? B . A 1 37 VAL 37 ? ? ? B . A 1 38 LEU 38 ? ? ? B . A 1 39 TRP 39 ? ? ? B . A 1 40 PRO 40 ? ? ? B . A 1 41 LEU 41 ? ? ? B . A 1 42 PRO 42 ? ? ? B . A 1 43 ALA 43 ? ? ? B . A 1 44 TYR 44 ? ? ? B . A 1 45 LEU 45 ? ? ? B . A 1 46 LEU 46 ? ? ? B . A 1 47 VAL 47 ? ? ? B . A 1 48 SER 48 ? ? ? B . A 1 49 ALA 49 ? ? ? B . A 1 50 GLY 50 ? ? ? B . A 1 51 CYS 51 ? ? ? B . A 1 52 TYR 52 ? ? ? B . A 1 53 ALA 53 ? ? ? B . A 1 54 LEU 54 ? ? ? B . A 1 55 GLY 55 ? ? ? B . A 1 56 THR 56 ? ? ? B . A 1 57 VAL 57 ? ? ? B . A 1 58 GLY 58 ? ? ? B . A 1 59 TYR 59 ? ? ? B . A 1 60 ARG 60 ? ? ? B . A 1 61 VAL 61 ? ? ? B . A 1 62 ALA 62 ? ? ? B . A 1 63 THR 63 ? ? ? B . A 1 64 PHE 64 ? ? ? B . A 1 65 HIS 65 65 HIS HIS B . A 1 66 ASP 66 66 ASP ASP B . A 1 67 CYS 67 67 CYS CYS B . A 1 68 GLU 68 68 GLU GLU B . A 1 69 ASP 69 69 ASP ASP B . A 1 70 ALA 70 70 ALA ALA B . A 1 71 ALA 71 71 ALA ALA B . A 1 72 ARG 72 72 ARG ARG B . A 1 73 GLU 73 73 GLU GLU B . A 1 74 LEU 74 74 LEU LEU B . A 1 75 GLN 75 75 GLN GLN B . A 1 76 SER 76 76 SER SER B . A 1 77 GLN 77 77 GLN GLN B . A 1 78 ILE 78 78 ILE ILE B . A 1 79 VAL 79 79 VAL VAL B . A 1 80 GLU 80 80 GLU GLU B . A 1 81 ALA 81 81 ALA ALA B . A 1 82 ARG 82 82 ARG ARG B . A 1 83 ALA 83 83 ALA ALA B . A 1 84 ASP 84 84 ASP ASP B . A 1 85 LEU 85 85 LEU LEU B . A 1 86 ALA 86 ? ? ? B . A 1 87 ARG 87 ? ? ? B . A 1 88 ARG 88 ? ? ? B . A 1 89 GLY 89 ? ? ? B . A 1 90 LEU 90 ? ? ? B . A 1 91 ARG 91 ? ? ? B . A 1 92 PHE 92 ? ? ? B . # # loop_ _ma_data.id _ma_data.name _ma_data.content_type _ma_data.content_type_other_details 1 'Cell shape protein MreC {PDB ID=7eft, label_asym_id=B, auth_asym_id=B, SMTL ID=7eft.1.B}' 'template structure' . 2 . target . 3 'Target-template alignment by HHblits to 7eft, label_asym_id=B' 'target-template alignment' . 4 'model 1' 'model coordinates' . 5 SMTL 'reference database' . 6 PDB 'reference database' . 7 'Template search output' other 'Results of the sequence search' # # loop_ _ma_data_group.ordinal_id _ma_data_group.group_id _ma_data_group.data_id 1 1 2 2 1 5 3 1 6 4 2 7 5 3 2 6 3 1 7 3 3 8 4 1 9 4 3 10 5 4 # # loop_ _ma_data_ref_db.data_id _ma_data_ref_db.name _ma_data_ref_db.location_url _ma_data_ref_db.version _ma_data_ref_db.release_date 5 SMTL https://swissmodel.expasy.org/templates/ . 2024-12-25 6 PDB https://www.wwpdb.org . 2024-12-20 # # loop_ _ma_target_entity.entity_id _ma_target_entity.data_id _ma_target_entity.origin 1 2 'reference database' # # loop_ _ma_target_entity_instance.asym_id _ma_target_entity_instance.entity_id _ma_target_entity_instance.details A 1 . # # loop_ _ma_template_trans_matrix.id _ma_template_trans_matrix.rot_matrix[1][1] _ma_template_trans_matrix.rot_matrix[2][1] _ma_template_trans_matrix.rot_matrix[3][1] _ma_template_trans_matrix.rot_matrix[1][2] _ma_template_trans_matrix.rot_matrix[2][2] _ma_template_trans_matrix.rot_matrix[3][2] _ma_template_trans_matrix.rot_matrix[1][3] _ma_template_trans_matrix.rot_matrix[2][3] _ma_template_trans_matrix.rot_matrix[3][3] _ma_template_trans_matrix.tr_vector[1] _ma_template_trans_matrix.tr_vector[2] _ma_template_trans_matrix.tr_vector[3] 1 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0 0 0 # # loop_ _ma_template_details.ordinal_id _ma_template_details.template_id _ma_template_details.template_origin _ma_template_details.template_entity_type _ma_template_details.template_trans_matrix_id _ma_template_details.template_data_id _ma_template_details.target_asym_id _ma_template_details.template_label_asym_id _ma_template_details.template_label_entity_id _ma_template_details.template_model_num _ma_template_details.template_auth_asym_id 1 1 'reference database' polymer 1 1 A B 1 1 B # # loop_ _ma_template_poly.template_id _ma_template_poly.seq_one_letter_code _ma_template_poly.seq_one_letter_code_can 1 ;MKPIFSRGPSLQIRLILAVLVALGIIIADSRLGTFSQIRTYMDTAVSPFYFVSNAPRELLDGVSQTLASR DQLELENRALRQELLLKNSELLMLGQYKQENARLRELLGSPLRQDEQKMVTQVISTVNDPYSDQVVIDKG SVNGVYEGQPVISDKGVVGQVVAVAKLTSRVLLICDATHALPIQVLRNDIRVIAAGNGCTDDLQLEHLPA NTDIRVGDVLVTSGLGGRFPEGYPVAVVSSVKLDTQRAYTVIQARPTAGLQRLRYLLLLWGADRNGANPM TPEEVHRVANERLMQMMPQVLPSPDAMGPKLPEPATGIAQPTPQQPATGNAATAPAAPTQPAANRSPQRA TPPQSGAQPPARAPGGQ ; ;MKPIFSRGPSLQIRLILAVLVALGIIIADSRLGTFSQIRTYMDTAVSPFYFVSNAPRELLDGVSQTLASR DQLELENRALRQELLLKNSELLMLGQYKQENARLRELLGSPLRQDEQKMVTQVISTVNDPYSDQVVIDKG SVNGVYEGQPVISDKGVVGQVVAVAKLTSRVLLICDATHALPIQVLRNDIRVIAAGNGCTDDLQLEHLPA NTDIRVGDVLVTSGLGGRFPEGYPVAVVSSVKLDTQRAYTVIQARPTAGLQRLRYLLLLWGADRNGANPM TPEEVHRVANERLMQMMPQVLPSPDAMGPKLPEPATGIAQPTPQQPATGNAATAPAAPTQPAANRSPQRA TPPQSGAQPPARAPGGQ ; # # loop_ _ma_template_poly_segment.id _ma_template_poly_segment.template_id _ma_template_poly_segment.residue_number_begin _ma_template_poly_segment.residue_number_end 1 1 45 91 # # loop_ _ma_template_ref_db_details.template_id _ma_template_ref_db_details.db_name _ma_template_ref_db_details.db_name_other_details _ma_template_ref_db_details.db_accession_code _ma_template_ref_db_details.db_version_date 1 PDB . 7eft 2024-10-23 # # loop_ _ma_target_template_poly_mapping.id _ma_target_template_poly_mapping.template_segment_id _ma_target_template_poly_mapping.target_asym_id _ma_target_template_poly_mapping.target_seq_id_begin _ma_target_template_poly_mapping.target_seq_id_end 1 1 A 1 92 # # loop_ _ma_alignment_info.alignment_id _ma_alignment_info.data_id _ma_alignment_info.software_group_id _ma_alignment_info.alignment_length _ma_alignment_info.alignment_type _ma_alignment_info.alignment_mode 1 3 1 92 'target-template pairwise alignment' local # # loop_ _ma_alignment_details.ordinal_id _ma_alignment_details.alignment_id _ma_alignment_details.template_segment_id _ma_alignment_details.target_asym_id _ma_alignment_details.score_type _ma_alignment_details.score_type_other_details _ma_alignment_details.score_value _ma_alignment_details.percent_sequence_identity _ma_alignment_details.sequence_identity_denominator _ma_alignment_details.sequence_identity_denominator_other_details 1 1 1 A 'HHblits e-value' . 14.000 21.277 'Number of aligned residue pairs (not including the gaps)' . # # loop_ _ma_alignment.ordinal_id _ma_alignment.alignment_id _ma_alignment.target_template_flag _ma_alignment.sequence 1 1 1 MTKLTQWLWGLALLGSAWAALTMGALGLELPFPCREVLWPLPAYLLVSAGCYALGTVGYRVATFHDCEDAARELQSQIVEARADLARRGLRF 2 1 2 --------------------------------------AVSPFYFVSNAPRELLDGVSQTLASRDQLELENRALRQELLLKNSEL------- # # loop_ _ma_protocol_step.ordinal_id _ma_protocol_step.protocol_id _ma_protocol_step.step_id _ma_protocol_step.method_type _ma_protocol_step.step_name _ma_protocol_step.details _ma_protocol_step.software_group_id _ma_protocol_step.input_data_group_id _ma_protocol_step.output_data_group_id 1 1 1 'template search' 'template search' 'SWISS-MODEL template search in PDB' 2 1 2 2 1 2 'template selection' 'template selection' 'Automatic template selection by SWISS-MODEL {QSQE=0.000}' 3 2 4 3 1 3 modeling 'homology modeling' 'SWISS-MODEL auto-model mode using ProMod3 on 7eft.1, oligomeric state (monomer) as predicted' 4 3 5 # # loop_ _ma_model_list.ordinal_id _ma_model_list.model_id _ma_model_list.model_group_id _ma_model_list.model_name _ma_model_list.model_group_name _ma_model_list.data_id _ma_model_list.model_type _ma_model_list.model_type_other_details 1 1 1 'model 1' . 4 'Homology model' . # # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_alt_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.auth_seq_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.label_entity_id _atom_site.auth_asym_id _atom_site.auth_comp_id _atom_site.B_iso_or_equiv _atom_site.pdbx_PDB_model_num ATOM 1 N N . HIS 65 65 ? A 65.164 21.335 9.420 1 1 B HIS 0.540 1 ATOM 2 C CA . HIS 65 65 ? A 65.032 22.831 9.203 1 1 B HIS 0.540 1 ATOM 3 C C . HIS 65 65 ? A 64.807 23.467 10.544 1 1 B HIS 0.540 1 ATOM 4 O O . HIS 65 65 ? A 63.675 23.848 10.842 1 1 B HIS 0.540 1 ATOM 5 C CB . HIS 65 65 ? A 63.838 23.211 8.264 1 1 B HIS 0.540 1 ATOM 6 C CG . HIS 65 65 ? A 64.047 22.761 6.869 1 1 B HIS 0.540 1 ATOM 7 N ND1 . HIS 65 65 ? A 64.990 23.452 6.139 1 1 B HIS 0.540 1 ATOM 8 C CD2 . HIS 65 65 ? A 63.500 21.776 6.128 1 1 B HIS 0.540 1 ATOM 9 C CE1 . HIS 65 65 ? A 64.989 22.882 4.960 1 1 B HIS 0.540 1 ATOM 10 N NE2 . HIS 65 65 ? A 64.107 21.844 4.888 1 1 B HIS 0.540 1 ATOM 11 N N . ASP 66 66 ? A 65.863 23.579 11.385 1 1 B ASP 0.650 1 ATOM 12 C CA . ASP 66 66 ? A 65.784 23.707 12.825 1 1 B ASP 0.650 1 ATOM 13 C C . ASP 66 66 ? A 64.953 24.846 13.418 1 1 B ASP 0.650 1 ATOM 14 O O . ASP 66 66 ? A 64.513 24.788 14.542 1 1 B ASP 0.650 1 ATOM 15 C CB . ASP 66 66 ? A 67.206 23.782 13.435 1 1 B ASP 0.650 1 ATOM 16 C CG . ASP 66 66 ? A 67.958 22.479 13.231 1 1 B ASP 0.650 1 ATOM 17 O OD1 . ASP 66 66 ? A 67.374 21.527 12.652 1 1 B ASP 0.650 1 ATOM 18 O OD2 . ASP 66 66 ? A 69.159 22.465 13.591 1 1 B ASP 0.650 1 ATOM 19 N N . CYS 67 67 ? A 64.719 25.927 12.643 1 1 B CYS 0.520 1 ATOM 20 C CA . CYS 67 67 ? A 63.847 27.020 13.030 1 1 B CYS 0.520 1 ATOM 21 C C . CYS 67 67 ? A 62.385 26.614 13.256 1 1 B CYS 0.520 1 ATOM 22 O O . CYS 67 67 ? A 61.773 27.033 14.234 1 1 B CYS 0.520 1 ATOM 23 C CB . CYS 67 67 ? A 63.936 28.133 11.950 1 1 B CYS 0.520 1 ATOM 24 S SG . CYS 67 67 ? A 65.620 28.817 11.806 1 1 B CYS 0.520 1 ATOM 25 N N . GLU 68 68 ? A 61.798 25.761 12.373 1 1 B GLU 0.530 1 ATOM 26 C CA . GLU 68 68 ? A 60.477 25.170 12.582 1 1 B GLU 0.530 1 ATOM 27 C C . GLU 68 68 ? A 60.489 24.151 13.728 1 1 B GLU 0.530 1 ATOM 28 O O . GLU 68 68 ? A 59.682 24.224 14.645 1 1 B GLU 0.530 1 ATOM 29 C CB . GLU 68 68 ? A 59.902 24.564 11.266 1 1 B GLU 0.530 1 ATOM 30 C CG . GLU 68 68 ? A 58.341 24.566 11.186 1 1 B GLU 0.530 1 ATOM 31 C CD . GLU 68 68 ? A 57.585 23.327 11.680 1 1 B GLU 0.530 1 ATOM 32 O OE1 . GLU 68 68 ? A 56.375 23.239 11.354 1 1 B GLU 0.530 1 ATOM 33 O OE2 . GLU 68 68 ? A 58.162 22.456 12.372 1 1 B GLU 0.530 1 ATOM 34 N N . ASP 69 69 ? A 61.519 23.257 13.752 1 1 B ASP 0.590 1 ATOM 35 C CA . ASP 69 69 ? A 61.725 22.206 14.743 1 1 B ASP 0.590 1 ATOM 36 C C . ASP 69 69 ? A 61.832 22.779 16.164 1 1 B ASP 0.590 1 ATOM 37 O O . ASP 69 69 ? A 61.232 22.255 17.116 1 1 B ASP 0.590 1 ATOM 38 C CB . ASP 69 69 ? A 63.008 21.378 14.380 1 1 B ASP 0.590 1 ATOM 39 C CG . ASP 69 69 ? A 62.838 20.651 13.047 1 1 B ASP 0.590 1 ATOM 40 O OD1 . ASP 69 69 ? A 61.712 20.117 12.848 1 1 B ASP 0.590 1 ATOM 41 O OD2 . ASP 69 69 ? A 63.778 20.623 12.198 1 1 B ASP 0.590 1 ATOM 42 N N . ALA 70 70 ? A 62.531 23.928 16.329 1 1 B ALA 0.630 1 ATOM 43 C CA . ALA 70 70 ? A 62.587 24.738 17.530 1 1 B ALA 0.630 1 ATOM 44 C C . ALA 70 70 ? A 61.216 25.243 17.974 1 1 B ALA 0.630 1 ATOM 45 O O . ALA 70 70 ? A 60.880 25.175 19.142 1 1 B ALA 0.630 1 ATOM 46 C CB . ALA 70 70 ? A 63.528 25.965 17.360 1 1 B ALA 0.630 1 ATOM 47 N N . ALA 71 71 ? A 60.354 25.731 17.052 1 1 B ALA 0.620 1 ATOM 48 C CA . ALA 71 71 ? A 59.026 26.202 17.393 1 1 B ALA 0.620 1 ATOM 49 C C . ALA 71 71 ? A 58.096 25.079 17.841 1 1 B ALA 0.620 1 ATOM 50 O O . ALA 71 71 ? A 57.267 25.275 18.723 1 1 B ALA 0.620 1 ATOM 51 C CB . ALA 71 71 ? A 58.434 27.040 16.240 1 1 B ALA 0.620 1 ATOM 52 N N . ARG 72 72 ? A 58.240 23.855 17.286 1 1 B ARG 0.560 1 ATOM 53 C CA . ARG 72 72 ? A 57.540 22.681 17.779 1 1 B ARG 0.560 1 ATOM 54 C C . ARG 72 72 ? A 57.928 22.304 19.200 1 1 B ARG 0.560 1 ATOM 55 O O . ARG 72 72 ? A 57.057 22.051 20.027 1 1 B ARG 0.560 1 ATOM 56 C CB . ARG 72 72 ? A 57.746 21.476 16.827 1 1 B ARG 0.560 1 ATOM 57 C CG . ARG 72 72 ? A 57.002 20.210 17.326 1 1 B ARG 0.560 1 ATOM 58 C CD . ARG 72 72 ? A 56.752 19.040 16.346 1 1 B ARG 0.560 1 ATOM 59 N NE . ARG 72 72 ? A 56.727 19.561 14.921 1 1 B ARG 0.560 1 ATOM 60 C CZ . ARG 72 72 ? A 57.602 19.277 13.946 1 1 B ARG 0.560 1 ATOM 61 N NH1 . ARG 72 72 ? A 58.587 18.405 14.102 1 1 B ARG 0.560 1 ATOM 62 N NH2 . ARG 72 72 ? A 57.639 19.997 12.834 1 1 B ARG 0.560 1 ATOM 63 N N . GLU 73 73 ? A 59.246 22.336 19.511 1 1 B GLU 0.610 1 ATOM 64 C CA . GLU 73 73 ? A 59.785 22.205 20.852 1 1 B GLU 0.610 1 ATOM 65 C C . GLU 73 73 ? A 59.265 23.309 21.779 1 1 B GLU 0.610 1 ATOM 66 O O . GLU 73 73 ? A 58.830 23.093 22.891 1 1 B GLU 0.610 1 ATOM 67 C CB . GLU 73 73 ? A 61.341 22.205 20.813 1 1 B GLU 0.610 1 ATOM 68 C CG . GLU 73 73 ? A 62.000 22.133 22.214 1 1 B GLU 0.610 1 ATOM 69 C CD . GLU 73 73 ? A 61.675 20.884 23.027 1 1 B GLU 0.610 1 ATOM 70 O OE1 . GLU 73 73 ? A 61.927 20.986 24.257 1 1 B GLU 0.610 1 ATOM 71 O OE2 . GLU 73 73 ? A 61.204 19.863 22.467 1 1 B GLU 0.610 1 ATOM 72 N N . LEU 74 74 ? A 59.219 24.575 21.313 1 1 B LEU 0.610 1 ATOM 73 C CA . LEU 74 74 ? A 58.603 25.622 22.110 1 1 B LEU 0.610 1 ATOM 74 C C . LEU 74 74 ? A 57.124 25.441 22.374 1 1 B LEU 0.610 1 ATOM 75 O O . LEU 74 74 ? A 56.664 25.637 23.493 1 1 B LEU 0.610 1 ATOM 76 C CB . LEU 74 74 ? A 58.813 26.996 21.460 1 1 B LEU 0.610 1 ATOM 77 C CG . LEU 74 74 ? A 60.291 27.420 21.469 1 1 B LEU 0.610 1 ATOM 78 C CD1 . LEU 74 74 ? A 60.473 28.631 20.544 1 1 B LEU 0.610 1 ATOM 79 C CD2 . LEU 74 74 ? A 60.814 27.695 22.894 1 1 B LEU 0.610 1 ATOM 80 N N . GLN 75 75 ? A 56.325 25.026 21.373 1 1 B GLN 0.590 1 ATOM 81 C CA . GLN 75 75 ? A 54.934 24.696 21.593 1 1 B GLN 0.590 1 ATOM 82 C C . GLN 75 75 ? A 54.741 23.539 22.571 1 1 B GLN 0.590 1 ATOM 83 O O . GLN 75 75 ? A 53.922 23.649 23.468 1 1 B GLN 0.590 1 ATOM 84 C CB . GLN 75 75 ? A 54.211 24.415 20.260 1 1 B GLN 0.590 1 ATOM 85 C CG . GLN 75 75 ? A 54.068 25.699 19.408 1 1 B GLN 0.590 1 ATOM 86 C CD . GLN 75 75 ? A 53.464 25.363 18.044 1 1 B GLN 0.590 1 ATOM 87 O OE1 . GLN 75 75 ? A 53.525 24.257 17.550 1 1 B GLN 0.590 1 ATOM 88 N NE2 . GLN 75 75 ? A 52.841 26.395 17.411 1 1 B GLN 0.590 1 ATOM 89 N N . SER 76 76 ? A 55.536 22.438 22.468 1 1 B SER 0.610 1 ATOM 90 C CA . SER 76 76 ? A 55.493 21.315 23.408 1 1 B SER 0.610 1 ATOM 91 C C . SER 76 76 ? A 55.826 21.744 24.842 1 1 B SER 0.610 1 ATOM 92 O O . SER 76 76 ? A 55.062 21.434 25.754 1 1 B SER 0.610 1 ATOM 93 C CB . SER 76 76 ? A 56.378 20.095 22.971 1 1 B SER 0.610 1 ATOM 94 O OG . SER 76 76 ? A 57.745 20.474 22.848 1 1 B SER 0.610 1 ATOM 95 N N . GLN 77 77 ? A 56.886 22.569 25.059 1 1 B GLN 0.580 1 ATOM 96 C CA . GLN 77 77 ? A 57.248 23.179 26.344 1 1 B GLN 0.580 1 ATOM 97 C C . GLN 77 77 ? A 56.145 24.048 26.942 1 1 B GLN 0.580 1 ATOM 98 O O . GLN 77 77 ? A 55.846 24.008 28.134 1 1 B GLN 0.580 1 ATOM 99 C CB . GLN 77 77 ? A 58.490 24.105 26.187 1 1 B GLN 0.580 1 ATOM 100 C CG . GLN 77 77 ? A 59.808 23.336 25.949 1 1 B GLN 0.580 1 ATOM 101 C CD . GLN 77 77 ? A 60.979 24.286 25.699 1 1 B GLN 0.580 1 ATOM 102 O OE1 . GLN 77 77 ? A 60.928 25.497 25.893 1 1 B GLN 0.580 1 ATOM 103 N NE2 . GLN 77 77 ? A 62.104 23.696 25.233 1 1 B GLN 0.580 1 ATOM 104 N N . ILE 78 78 ? A 55.489 24.866 26.091 1 1 B ILE 0.580 1 ATOM 105 C CA . ILE 78 78 ? A 54.312 25.645 26.448 1 1 B ILE 0.580 1 ATOM 106 C C . ILE 78 78 ? A 53.130 24.769 26.852 1 1 B ILE 0.580 1 ATOM 107 O O . ILE 78 78 ? A 52.474 25.059 27.850 1 1 B ILE 0.580 1 ATOM 108 C CB . ILE 78 78 ? A 53.918 26.620 25.337 1 1 B ILE 0.580 1 ATOM 109 C CG1 . ILE 78 78 ? A 55.022 27.692 25.175 1 1 B ILE 0.580 1 ATOM 110 C CG2 . ILE 78 78 ? A 52.568 27.310 25.646 1 1 B ILE 0.580 1 ATOM 111 C CD1 . ILE 78 78 ? A 54.868 28.526 23.894 1 1 B ILE 0.580 1 ATOM 112 N N . VAL 79 79 ? A 52.827 23.663 26.127 1 1 B VAL 0.580 1 ATOM 113 C CA . VAL 79 79 ? A 51.769 22.710 26.477 1 1 B VAL 0.580 1 ATOM 114 C C . VAL 79 79 ? A 51.997 22.094 27.848 1 1 B VAL 0.580 1 ATOM 115 O O . VAL 79 79 ? A 51.085 22.089 28.669 1 1 B VAL 0.580 1 ATOM 116 C CB . VAL 79 79 ? A 51.615 21.582 25.444 1 1 B VAL 0.580 1 ATOM 117 C CG1 . VAL 79 79 ? A 50.648 20.461 25.914 1 1 B VAL 0.580 1 ATOM 118 C CG2 . VAL 79 79 ? A 51.064 22.165 24.125 1 1 B VAL 0.580 1 ATOM 119 N N . GLU 80 80 ? A 53.235 21.624 28.142 1 1 B GLU 0.540 1 ATOM 120 C CA . GLU 80 80 ? A 53.603 21.073 29.435 1 1 B GLU 0.540 1 ATOM 121 C C . GLU 80 80 ? A 53.487 22.078 30.571 1 1 B GLU 0.540 1 ATOM 122 O O . GLU 80 80 ? A 52.815 21.825 31.557 1 1 B GLU 0.540 1 ATOM 123 C CB . GLU 80 80 ? A 55.039 20.502 29.379 1 1 B GLU 0.540 1 ATOM 124 C CG . GLU 80 80 ? A 55.134 19.255 28.464 1 1 B GLU 0.540 1 ATOM 125 C CD . GLU 80 80 ? A 56.542 18.672 28.376 1 1 B GLU 0.540 1 ATOM 126 O OE1 . GLU 80 80 ? A 57.496 19.293 28.906 1 1 B GLU 0.540 1 ATOM 127 O OE2 . GLU 80 80 ? A 56.652 17.574 27.770 1 1 B GLU 0.540 1 ATOM 128 N N . ALA 81 81 ? A 54.049 23.300 30.401 1 1 B ALA 0.570 1 ATOM 129 C CA . ALA 81 81 ? A 53.938 24.357 31.391 1 1 B ALA 0.570 1 ATOM 130 C C . ALA 81 81 ? A 52.505 24.829 31.644 1 1 B ALA 0.570 1 ATOM 131 O O . ALA 81 81 ? A 52.122 25.098 32.768 1 1 B ALA 0.570 1 ATOM 132 C CB . ALA 81 81 ? A 54.807 25.571 30.991 1 1 B ALA 0.570 1 ATOM 133 N N . ARG 82 82 ? A 51.656 24.937 30.598 1 1 B ARG 0.440 1 ATOM 134 C CA . ARG 82 82 ? A 50.234 25.212 30.757 1 1 B ARG 0.440 1 ATOM 135 C C . ARG 82 82 ? A 49.441 24.128 31.473 1 1 B ARG 0.440 1 ATOM 136 O O . ARG 82 82 ? A 48.477 24.442 32.140 1 1 B ARG 0.440 1 ATOM 137 C CB . ARG 82 82 ? A 49.529 25.405 29.403 1 1 B ARG 0.440 1 ATOM 138 C CG . ARG 82 82 ? A 49.872 26.715 28.683 1 1 B ARG 0.440 1 ATOM 139 C CD . ARG 82 82 ? A 49.194 26.734 27.318 1 1 B ARG 0.440 1 ATOM 140 N NE . ARG 82 82 ? A 49.551 28.033 26.663 1 1 B ARG 0.440 1 ATOM 141 C CZ . ARG 82 82 ? A 49.307 28.305 25.375 1 1 B ARG 0.440 1 ATOM 142 N NH1 . ARG 82 82 ? A 48.667 27.432 24.606 1 1 B ARG 0.440 1 ATOM 143 N NH2 . ARG 82 82 ? A 49.734 29.444 24.833 1 1 B ARG 0.440 1 ATOM 144 N N . ALA 83 83 ? A 49.796 22.835 31.275 1 1 B ALA 0.470 1 ATOM 145 C CA . ALA 83 83 ? A 49.255 21.710 32.015 1 1 B ALA 0.470 1 ATOM 146 C C . ALA 83 83 ? A 49.609 21.681 33.512 1 1 B ALA 0.470 1 ATOM 147 O O . ALA 83 83 ? A 48.828 21.165 34.300 1 1 B ALA 0.470 1 ATOM 148 C CB . ALA 83 83 ? A 49.720 20.384 31.363 1 1 B ALA 0.470 1 ATOM 149 N N . ASP 84 84 ? A 50.806 22.195 33.910 1 1 B ASP 0.720 1 ATOM 150 C CA . ASP 84 84 ? A 51.199 22.459 35.291 1 1 B ASP 0.720 1 ATOM 151 C C . ASP 84 84 ? A 50.389 23.573 35.983 1 1 B ASP 0.720 1 ATOM 152 O O . ASP 84 84 ? A 50.150 23.510 37.185 1 1 B ASP 0.720 1 ATOM 153 C CB . ASP 84 84 ? A 52.702 22.872 35.379 1 1 B ASP 0.720 1 ATOM 154 C CG . ASP 84 84 ? A 53.682 21.747 35.095 1 1 B ASP 0.720 1 ATOM 155 O OD1 . ASP 84 84 ? A 53.289 20.556 35.150 1 1 B ASP 0.720 1 ATOM 156 O OD2 . ASP 84 84 ? A 54.877 22.093 34.889 1 1 B ASP 0.720 1 ATOM 157 N N . LEU 85 85 ? A 50.041 24.645 35.225 1 1 B LEU 0.680 1 ATOM 158 C CA . LEU 85 85 ? A 49.279 25.805 35.683 1 1 B LEU 0.680 1 ATOM 159 C C . LEU 85 85 ? A 47.730 25.649 35.801 1 1 B LEU 0.680 1 ATOM 160 O O . LEU 85 85 ? A 47.139 24.610 35.416 1 1 B LEU 0.680 1 ATOM 161 C CB . LEU 85 85 ? A 49.536 27.058 34.780 1 1 B LEU 0.680 1 ATOM 162 C CG . LEU 85 85 ? A 51.001 27.562 34.682 1 1 B LEU 0.680 1 ATOM 163 C CD1 . LEU 85 85 ? A 51.110 28.775 33.731 1 1 B LEU 0.680 1 ATOM 164 C CD2 . LEU 85 85 ? A 51.648 27.879 36.047 1 1 B LEU 0.680 1 ATOM 165 O OXT . LEU 85 85 ? A 47.117 26.636 36.307 1 1 B LEU 0.680 1 # # loop_ _atom_type.symbol C N O S # # loop_ _ma_qa_metric.id _ma_qa_metric.name _ma_qa_metric.description _ma_qa_metric.type _ma_qa_metric.mode _ma_qa_metric.type_other_details _ma_qa_metric.software_group_id 1 QMEANDisCo 'Predicted accuracy according to all-atom lDDT in [0,1].' 'pLDDT all-atom in [0,1]' local . 5 2 QMEANDisCo 'Predicted accuracy according to all-atom lDDT in [0,1].' 'pLDDT all-atom in [0,1]' global . 5 3 GMQE 'Global Model Quality Estimate of the model accuracy, calculated by SWISS-MODEL.' 'normalized score' global . 6 # # loop_ _ma_qa_metric_global.ordinal_id _ma_qa_metric_global.model_id _ma_qa_metric_global.metric_id _ma_qa_metric_global.metric_value 1 1 2 0.582 2 1 3 0.089 # # loop_ _ma_qa_metric_local.ordinal_id _ma_qa_metric_local.model_id _ma_qa_metric_local.label_asym_id _ma_qa_metric_local.label_seq_id _ma_qa_metric_local.label_comp_id _ma_qa_metric_local.metric_id _ma_qa_metric_local.metric_value 1 1 A 65 HIS 1 0.540 2 1 A 66 ASP 1 0.650 3 1 A 67 CYS 1 0.520 4 1 A 68 GLU 1 0.530 5 1 A 69 ASP 1 0.590 6 1 A 70 ALA 1 0.630 7 1 A 71 ALA 1 0.620 8 1 A 72 ARG 1 0.560 9 1 A 73 GLU 1 0.610 10 1 A 74 LEU 1 0.610 11 1 A 75 GLN 1 0.590 12 1 A 76 SER 1 0.610 13 1 A 77 GLN 1 0.580 14 1 A 78 ILE 1 0.580 15 1 A 79 VAL 1 0.580 16 1 A 80 GLU 1 0.540 17 1 A 81 ALA 1 0.570 18 1 A 82 ARG 1 0.440 19 1 A 83 ALA 1 0.470 20 1 A 84 ASP 1 0.720 21 1 A 85 LEU 1 0.680 # # loop_ _pdbx_data_usage.id _pdbx_data_usage.type _pdbx_data_usage.details _pdbx_data_usage.url 1 license ;This SWISS-MODEL protein model is copyright. 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