data_SMR-fbc71b2d0048fd28849ff09ad5b56857_3 _entry.id SMR-fbc71b2d0048fd28849ff09ad5b56857_3 _struct.entry_id SMR-fbc71b2d0048fd28849ff09ad5b56857_3 _struct.pdbx_model_details ;This model was generated unsupervised by the SWISS-MODEL homology-modelling pipeline for the SWISS-MODEL Repository, a database of annotated 3D protein structure models. The modelled monomer covers following UniProtKB entries: - Q7YRL5/ TNR5_CANLF, Tumor necrosis factor receptor superfamily member 5 Estimated model accuracy of this model is 0.006, calculated by SWISS-MODEL as Global Model Quality Estimate (GMQE). ; _struct.pdbx_structure_determination_methodology computational _struct.title 'Model for UniProtKB entries Q7YRL5' _audit_conform.dict_location https://raw.githubusercontent.com/ihmwg/ModelCIF/d18ba38/base/mmcif_ma-core.dic _audit_conform.dict_name mmcif_ma.dic _audit_conform.dict_version 1.4.6 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary 'The SWISS-MODEL Repository - new features and functionality' 'Nucleic Acids Res.' 45 D313 D319 2017 27899672 10.1093/nar/gkw1132 2 'SWISS-MODEL: homology modelling of protein structures and complexes' 'Nucleic Acids Res.' 46 W296 W303 2018 29788355 10.1093/nar/gky427 3 'ProMod3 - A versatile homology modelling toolbox' 'PLoS Comput. Biol.' 17(1) 1 18 2021 33507980 10.1371/journal.pcbi.1008667 4 'QMEANDisCo - distance constraints applied on model quality estimation' Bioinformatics 36 1765 1771 2020 31697312 10.1093/bioinformatics/btz828 5 'OpenStructure: an integrated software framework for computational structural biology' 'Acta Crystallogr., Sect. D: Biol. Crystallogr.' 69 701 709 2013 23633579 10.1107/S0907444913007051 6 'BLAST+: architecture and applications' 'BMC Bioinf.' 10 421 . 2009 20003500 10.1186/1471-2105-10-421 7 'HH-suite3 for fast remote homology detection and deep protein annotation' 'BMC Bioinf.' 20 473 . 2019 31521110 10.1186/s12859-019-3019-7 # # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Bienert, S.' 1 primary 'Waterhouse, A.' 2 primary 'de Beer, T.A.P.' 3 primary 'Tauriello, G.' 4 primary 'Studer, G.' 5 primary 'Bordoli, L.' 6 primary 'Schwede, T.' 7 2 'Waterhouse, A.' 8 2 'Bertoni, M.' 9 2 'Bienert, S.' 10 2 'Studer, G.' 11 2 'Tauriello, G.' 12 2 'Gumienny, R.' 13 2 'Heer, F.T.' 14 2 'de Beer, T.A.P.' 15 2 'Rempfer, C.' 16 2 'Bordoli, L.' 17 2 'Lepore, R.' 18 2 'Schwede, T.' 19 3 'Studer, G.' 20 3 'Tauriello, G.' 21 3 'Bienert, S.' 22 3 'Biasini, M.' 23 3 'Johner, N.' 24 3 'Schwede, T.' 25 4 'Studer, G.' 26 4 'Rempfer, C.' 27 4 'Waterhouse, A.M.' 28 4 'Gumienny, R.' 29 4 'Haas, J.' 30 4 'Schwede, T.' 31 5 'Biasini, M.' 32 5 'Schmidt, T.' 33 5 'Bienert, S.' 34 5 'Mariani, V.' 35 5 'Studer, G.' 36 5 'Haas, J.' 37 5 'Johner, N.' 38 5 'Schenk, A.D.' 39 5 'Philippsen, A.' 40 5 'Schwede, T.' 41 6 'Camacho, C.' 42 6 'Coulouris, G.' 43 6 'Avagyan, V.' 44 6 'Ma, N.' 45 6 'Papadopoulos, J.' 46 6 'Bealer, K.' 47 6 'Madden, T.L.' 48 7 'Steinegger, M.' 49 7 'Meier, M.' 50 7 'Mirdita, M.' 51 7 'Vohringer, H.' 52 7 'Haunsberger, S.J.' 53 7 'Soding, J.' 54 # # loop_ _software.pdbx_ordinal _software.name _software.classification _software.description _software.version _software.type _software.location _software.citation_id 1 SWISS-MODEL 'model building' 'Homology modelling web service' 3ef406dae3f6eb8b74980f2a6e69a2109acde4aa package https://swissmodel.expasy.org 2 2 ProMod3 'model building' 'Modular homology modelling engine' 3.4.1 library https://git.scicore.unibas.ch/schwede/ProMod3 3 3 QMEAN 'model building' 'QMEAN - Qualitative Model Energy ANalysis' 4.3.1 library https://git.scicore.unibas.ch/schwede/QMEAN 4 4 OpenStructure 'data processing' 'Open-Source Computational Structural Biology Framework' 2.8.0 package https://openstructure.org/ 5 5 BLAST 'data collection' . 2.2.31 package https://blast.ncbi.nlm.nih.gov 6 6 HH-suite 'data collection' 'HH-suite3 for sensitive sequence searching' 3.2.0 package https://github.com/soedinglab/hh-suite 7 # # loop_ _ma_software_group.ordinal_id _ma_software_group.group_id _ma_software_group.software_id _ma_software_group.parameter_group_id 1 1 6 . 2 2 1 . 3 2 4 . 4 2 5 . 5 2 6 . 6 3 1 . 7 3 4 . 8 4 1 . 9 4 2 . 10 4 4 . 11 5 3 . 12 6 1 . 13 6 3 . 14 6 4 . # # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Bienert, S.' 1 'Waterhouse, A.' 2 'de Beer, T.A.P.' 3 'Tauriello, G.' 4 'Studer, G.' 5 'Bordoli, L.' 6 'Schwede, T.' 7 # # loop_ _chem_comp.id _chem_comp.type _chem_comp.name _chem_comp.formula _chem_comp.formula_weight _chem_comp.ma_provenance ALA 'L-peptide linking' ALANINE 'C3 H7 N O2' 89.094 'CCD Core' ARG 'L-peptide linking' ARGININE 'C6 H15 N4 O2 1' 175.212 'CCD Core' ASN 'L-peptide linking' ASPARAGINE 'C4 H8 N2 O3' 132.119 'CCD Core' ASP 'L-peptide linking' 'ASPARTIC ACID' 'C4 H7 N O4' 133.103 'CCD Core' CYS 'L-peptide linking' CYSTEINE 'C3 H7 N O2 S' 121.154 'CCD Core' GLN 'L-peptide linking' GLUTAMINE 'C5 H10 N2 O3' 146.146 'CCD Core' GLU 'L-peptide linking' 'GLUTAMIC ACID' 'C5 H9 N O4' 147.130 'CCD Core' GLY 'peptide linking' GLYCINE 'C2 H5 N O2' 75.067 'CCD Core' HIS 'L-peptide linking' HISTIDINE 'C6 H10 N3 O2 1' 156.165 'CCD Core' ILE 'L-peptide linking' ISOLEUCINE 'C6 H13 N O2' 131.175 'CCD Core' LEU 'L-peptide linking' LEUCINE 'C6 H13 N O2' 131.175 'CCD Core' LYS 'L-peptide linking' LYSINE 'C6 H15 N2 O2 1' 147.198 'CCD Core' MET 'L-peptide linking' METHIONINE 'C5 H11 N O2 S' 149.208 'CCD Core' PHE 'L-peptide linking' PHENYLALANINE 'C9 H11 N O2' 165.192 'CCD Core' PRO 'L-peptide linking' PROLINE 'C5 H9 N O2' 115.132 'CCD Core' SER 'L-peptide linking' SERINE 'C3 H7 N O3' 105.093 'CCD Core' THR 'L-peptide linking' THREONINE 'C4 H9 N O3' 119.120 'CCD Core' TRP 'L-peptide linking' TRYPTOPHAN 'C11 H12 N2 O2' 204.229 'CCD Core' TYR 'L-peptide linking' TYROSINE 'C9 H11 N O3' 181.191 'CCD Core' VAL 'L-peptide linking' VALINE 'C5 H11 N O2' 117.148 'CCD Core' # # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.details 1 polymer man . 35236.389 1 . # # loop_ _struct_ref.id _struct_ref.entity_id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_align_begin _struct_ref.pdbx_seq_one_letter_code _struct_ref.details 1 1 UNP TNR5_CANLF Q7YRL5 1 ;MVLLPLRCLFWGSLLTTVYPEPRTACREKQYLVDSQCCNMCPPGEKLVNDCLHTIDTECTRCQTGEFLDT WNAERHCHQHKYCDPNLGLHVEKEGTSETDTTCTCDEGLHCTNAACESCTMHSLCPPGLGVKQIATGISD TICDPCPIGFFSNVSSALEKCHPWTSCETKGLVKVQAGTNKTDVICGPQPRLRALVVVPIIMGILLVVLL VSACIRKVVKKPENKVMYQDPVEDLEEFPMPPHSIAPVQETLHGCQPVTQEDGKESRISVQERV ; 'Tumor necrosis factor receptor superfamily member 5' # # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.seq_align_beg _struct_ref_seq.seq_align_end _struct_ref_seq.db_align_beg _struct_ref_seq.db_align_end 1 1 1 274 1 274 # # loop_ _ma_target_ref_db_details.target_entity_id _ma_target_ref_db_details.db_name _ma_target_ref_db_details.db_name_other_details _ma_target_ref_db_details.db_code _ma_target_ref_db_details.db_accession _ma_target_ref_db_details.seq_db_isoform _ma_target_ref_db_details.seq_db_align_begin _ma_target_ref_db_details.seq_db_align_end _ma_target_ref_db_details.ncbi_taxonomy_id _ma_target_ref_db_details.organism_scientific _ma_target_ref_db_details.seq_db_sequence_version_date _ma_target_ref_db_details.seq_db_sequence_checksum 1 UNP . TNR5_CANLF Q7YRL5 . 1 274 9615 'Canis lupus familiaris (Dog) (Canis familiaris)' 2003-10-01 9723789A07FAB6DB # # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_strand_id _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can 1 polypeptide(L) no no A ;MVLLPLRCLFWGSLLTTVYPEPRTACREKQYLVDSQCCNMCPPGEKLVNDCLHTIDTECTRCQTGEFLDT WNAERHCHQHKYCDPNLGLHVEKEGTSETDTTCTCDEGLHCTNAACESCTMHSLCPPGLGVKQIATGISD TICDPCPIGFFSNVSSALEKCHPWTSCETKGLVKVQAGTNKTDVICGPQPRLRALVVVPIIMGILLVVLL VSACIRKVVKKPENKVMYQDPVEDLEEFPMPPHSIAPVQETLHGCQPVTQEDGKESRISVQERV ; ;MVLLPLRCLFWGSLLTTVYPEPRTACREKQYLVDSQCCNMCPPGEKLVNDCLHTIDTECTRCQTGEFLDT WNAERHCHQHKYCDPNLGLHVEKEGTSETDTTCTCDEGLHCTNAACESCTMHSLCPPGLGVKQIATGISD TICDPCPIGFFSNVSSALEKCHPWTSCETKGLVKVQAGTNKTDVICGPQPRLRALVVVPIIMGILLVVLL VSACIRKVVKKPENKVMYQDPVEDLEEFPMPPHSIAPVQETLHGCQPVTQEDGKESRISVQERV ; # # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET . 1 2 VAL . 1 3 LEU . 1 4 LEU . 1 5 PRO . 1 6 LEU . 1 7 ARG . 1 8 CYS . 1 9 LEU . 1 10 PHE . 1 11 TRP . 1 12 GLY . 1 13 SER . 1 14 LEU . 1 15 LEU . 1 16 THR . 1 17 THR . 1 18 VAL . 1 19 TYR . 1 20 PRO . 1 21 GLU . 1 22 PRO . 1 23 ARG . 1 24 THR . 1 25 ALA . 1 26 CYS . 1 27 ARG . 1 28 GLU . 1 29 LYS . 1 30 GLN . 1 31 TYR . 1 32 LEU . 1 33 VAL . 1 34 ASP . 1 35 SER . 1 36 GLN . 1 37 CYS . 1 38 CYS . 1 39 ASN . 1 40 MET . 1 41 CYS . 1 42 PRO . 1 43 PRO . 1 44 GLY . 1 45 GLU . 1 46 LYS . 1 47 LEU . 1 48 VAL . 1 49 ASN . 1 50 ASP . 1 51 CYS . 1 52 LEU . 1 53 HIS . 1 54 THR . 1 55 ILE . 1 56 ASP . 1 57 THR . 1 58 GLU . 1 59 CYS . 1 60 THR . 1 61 ARG . 1 62 CYS . 1 63 GLN . 1 64 THR . 1 65 GLY . 1 66 GLU . 1 67 PHE . 1 68 LEU . 1 69 ASP . 1 70 THR . 1 71 TRP . 1 72 ASN . 1 73 ALA . 1 74 GLU . 1 75 ARG . 1 76 HIS . 1 77 CYS . 1 78 HIS . 1 79 GLN . 1 80 HIS . 1 81 LYS . 1 82 TYR . 1 83 CYS . 1 84 ASP . 1 85 PRO . 1 86 ASN . 1 87 LEU . 1 88 GLY . 1 89 LEU . 1 90 HIS . 1 91 VAL . 1 92 GLU . 1 93 LYS . 1 94 GLU . 1 95 GLY . 1 96 THR . 1 97 SER . 1 98 GLU . 1 99 THR . 1 100 ASP . 1 101 THR . 1 102 THR . 1 103 CYS . 1 104 THR . 1 105 CYS . 1 106 ASP . 1 107 GLU . 1 108 GLY . 1 109 LEU . 1 110 HIS . 1 111 CYS . 1 112 THR . 1 113 ASN . 1 114 ALA . 1 115 ALA . 1 116 CYS . 1 117 GLU . 1 118 SER . 1 119 CYS . 1 120 THR . 1 121 MET . 1 122 HIS . 1 123 SER . 1 124 LEU . 1 125 CYS . 1 126 PRO . 1 127 PRO . 1 128 GLY . 1 129 LEU . 1 130 GLY . 1 131 VAL . 1 132 LYS . 1 133 GLN . 1 134 ILE . 1 135 ALA . 1 136 THR . 1 137 GLY . 1 138 ILE . 1 139 SER . 1 140 ASP . 1 141 THR . 1 142 ILE . 1 143 CYS . 1 144 ASP . 1 145 PRO . 1 146 CYS . 1 147 PRO . 1 148 ILE . 1 149 GLY . 1 150 PHE . 1 151 PHE . 1 152 SER . 1 153 ASN . 1 154 VAL . 1 155 SER . 1 156 SER . 1 157 ALA . 1 158 LEU . 1 159 GLU . 1 160 LYS . 1 161 CYS . 1 162 HIS . 1 163 PRO . 1 164 TRP . 1 165 THR . 1 166 SER . 1 167 CYS . 1 168 GLU . 1 169 THR . 1 170 LYS . 1 171 GLY . 1 172 LEU . 1 173 VAL . 1 174 LYS . 1 175 VAL . 1 176 GLN . 1 177 ALA . 1 178 GLY . 1 179 THR . 1 180 ASN . 1 181 LYS . 1 182 THR . 1 183 ASP . 1 184 VAL . 1 185 ILE . 1 186 CYS . 1 187 GLY . 1 188 PRO . 1 189 GLN . 1 190 PRO . 1 191 ARG . 1 192 LEU . 1 193 ARG . 1 194 ALA . 1 195 LEU . 1 196 VAL . 1 197 VAL . 1 198 VAL . 1 199 PRO . 1 200 ILE . 1 201 ILE . 1 202 MET . 1 203 GLY . 1 204 ILE . 1 205 LEU . 1 206 LEU . 1 207 VAL . 1 208 VAL . 1 209 LEU . 1 210 LEU . 1 211 VAL . 1 212 SER . 1 213 ALA . 1 214 CYS . 1 215 ILE . 1 216 ARG . 1 217 LYS . 1 218 VAL . 1 219 VAL . 1 220 LYS . 1 221 LYS . 1 222 PRO . 1 223 GLU . 1 224 ASN . 1 225 LYS . 1 226 VAL . 1 227 MET . 1 228 TYR . 1 229 GLN . 1 230 ASP . 1 231 PRO . 1 232 VAL . 1 233 GLU . 1 234 ASP . 1 235 LEU . 1 236 GLU . 1 237 GLU . 1 238 PHE . 1 239 PRO . 1 240 MET . 1 241 PRO . 1 242 PRO . 1 243 HIS . 1 244 SER . 1 245 ILE . 1 246 ALA . 1 247 PRO . 1 248 VAL . 1 249 GLN . 1 250 GLU . 1 251 THR . 1 252 LEU . 1 253 HIS . 1 254 GLY . 1 255 CYS . 1 256 GLN . 1 257 PRO . 1 258 VAL . 1 259 THR . 1 260 GLN . 1 261 GLU . 1 262 ASP . 1 263 GLY . 1 264 LYS . 1 265 GLU . 1 266 SER . 1 267 ARG . 1 268 ILE . 1 269 SER . 1 270 VAL . 1 271 GLN . 1 272 GLU . 1 273 ARG . 1 274 VAL . # # loop_ _struct_asym.id _struct_asym.entity_id _struct_asym.details A 1 . # # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code A 1 1 MET 1 ? ? ? A . A 1 2 VAL 2 ? ? ? A . A 1 3 LEU 3 ? ? ? A . A 1 4 LEU 4 ? ? ? A . A 1 5 PRO 5 ? ? ? A . A 1 6 LEU 6 ? ? ? A . A 1 7 ARG 7 ? ? ? A . A 1 8 CYS 8 ? ? ? A . A 1 9 LEU 9 ? ? ? A . A 1 10 PHE 10 ? ? ? A . A 1 11 TRP 11 ? ? ? A . A 1 12 GLY 12 ? ? ? A . A 1 13 SER 13 ? ? ? A . A 1 14 LEU 14 ? ? ? A . A 1 15 LEU 15 ? ? ? A . A 1 16 THR 16 ? ? ? A . A 1 17 THR 17 ? ? ? A . A 1 18 VAL 18 ? ? ? A . A 1 19 TYR 19 ? ? ? A . A 1 20 PRO 20 ? ? ? A . A 1 21 GLU 21 ? ? ? A . A 1 22 PRO 22 ? ? ? A . A 1 23 ARG 23 ? ? ? A . A 1 24 THR 24 ? ? ? A . A 1 25 ALA 25 ? ? ? A . A 1 26 CYS 26 ? ? ? A . A 1 27 ARG 27 ? ? ? A . A 1 28 GLU 28 ? ? ? A . A 1 29 LYS 29 ? ? ? A . A 1 30 GLN 30 ? ? ? A . A 1 31 TYR 31 ? ? ? A . A 1 32 LEU 32 ? ? ? A . A 1 33 VAL 33 ? ? ? A . A 1 34 ASP 34 ? ? ? A . A 1 35 SER 35 ? ? ? A . A 1 36 GLN 36 ? ? ? A . A 1 37 CYS 37 ? ? ? A . A 1 38 CYS 38 ? ? ? A . A 1 39 ASN 39 ? ? ? A . A 1 40 MET 40 ? ? ? A . A 1 41 CYS 41 ? ? ? A . A 1 42 PRO 42 ? ? ? A . A 1 43 PRO 43 ? ? ? A . A 1 44 GLY 44 ? ? ? A . A 1 45 GLU 45 ? ? ? A . A 1 46 LYS 46 ? ? ? A . A 1 47 LEU 47 ? ? ? A . A 1 48 VAL 48 ? ? ? A . A 1 49 ASN 49 ? ? ? A . A 1 50 ASP 50 ? ? ? A . A 1 51 CYS 51 ? ? ? A . A 1 52 LEU 52 ? ? ? A . A 1 53 HIS 53 ? ? ? A . A 1 54 THR 54 ? ? ? A . A 1 55 ILE 55 ? ? ? A . A 1 56 ASP 56 ? ? ? A . A 1 57 THR 57 ? ? ? A . A 1 58 GLU 58 ? ? ? A . A 1 59 CYS 59 ? ? ? A . A 1 60 THR 60 ? ? ? A . A 1 61 ARG 61 ? ? ? A . A 1 62 CYS 62 ? ? ? A . A 1 63 GLN 63 ? ? ? A . A 1 64 THR 64 ? ? ? A . A 1 65 GLY 65 ? ? ? A . A 1 66 GLU 66 ? ? ? A . A 1 67 PHE 67 ? ? ? A . A 1 68 LEU 68 ? ? ? A . A 1 69 ASP 69 ? ? ? A . A 1 70 THR 70 ? ? ? A . A 1 71 TRP 71 ? ? ? A . A 1 72 ASN 72 ? ? ? A . A 1 73 ALA 73 ? ? ? A . A 1 74 GLU 74 ? ? ? A . A 1 75 ARG 75 ? ? ? A . A 1 76 HIS 76 ? ? ? A . A 1 77 CYS 77 ? ? ? A . A 1 78 HIS 78 ? ? ? A . A 1 79 GLN 79 ? ? ? A . A 1 80 HIS 80 ? ? ? A . A 1 81 LYS 81 ? ? ? A . A 1 82 TYR 82 ? ? ? A . A 1 83 CYS 83 ? ? ? A . A 1 84 ASP 84 ? ? ? A . A 1 85 PRO 85 ? ? ? A . A 1 86 ASN 86 ? ? ? A . A 1 87 LEU 87 ? ? ? A . A 1 88 GLY 88 ? ? ? A . A 1 89 LEU 89 ? ? ? A . A 1 90 HIS 90 ? ? ? A . A 1 91 VAL 91 ? ? ? A . A 1 92 GLU 92 ? ? ? A . A 1 93 LYS 93 ? ? ? A . A 1 94 GLU 94 ? ? ? A . A 1 95 GLY 95 ? ? ? A . A 1 96 THR 96 ? ? ? A . A 1 97 SER 97 ? ? ? A . A 1 98 GLU 98 ? ? ? A . A 1 99 THR 99 ? ? ? A . A 1 100 ASP 100 ? ? ? A . A 1 101 THR 101 ? ? ? A . A 1 102 THR 102 ? ? ? A . A 1 103 CYS 103 ? ? ? A . A 1 104 THR 104 ? ? ? A . A 1 105 CYS 105 ? ? ? A . A 1 106 ASP 106 ? ? ? A . A 1 107 GLU 107 ? ? ? A . A 1 108 GLY 108 ? ? ? A . A 1 109 LEU 109 ? ? ? A . A 1 110 HIS 110 ? ? ? A . A 1 111 CYS 111 ? ? ? A . A 1 112 THR 112 ? ? ? A . A 1 113 ASN 113 ? ? ? A . A 1 114 ALA 114 ? ? ? A . A 1 115 ALA 115 ? ? ? A . A 1 116 CYS 116 ? ? ? A . A 1 117 GLU 117 ? ? ? A . A 1 118 SER 118 ? ? ? A . A 1 119 CYS 119 ? ? ? A . A 1 120 THR 120 ? ? ? A . A 1 121 MET 121 ? ? ? A . A 1 122 HIS 122 ? ? ? A . A 1 123 SER 123 ? ? ? A . A 1 124 LEU 124 ? ? ? A . A 1 125 CYS 125 ? ? ? A . A 1 126 PRO 126 ? ? ? A . A 1 127 PRO 127 ? ? ? A . A 1 128 GLY 128 ? ? ? A . A 1 129 LEU 129 ? ? ? A . A 1 130 GLY 130 ? ? ? A . A 1 131 VAL 131 ? ? ? A . A 1 132 LYS 132 ? ? ? A . A 1 133 GLN 133 ? ? ? A . A 1 134 ILE 134 ? ? ? A . A 1 135 ALA 135 ? ? ? A . A 1 136 THR 136 ? ? ? A . A 1 137 GLY 137 ? ? ? A . A 1 138 ILE 138 ? ? ? A . A 1 139 SER 139 ? ? ? A . A 1 140 ASP 140 ? ? ? A . A 1 141 THR 141 ? ? ? A . A 1 142 ILE 142 ? ? ? A . A 1 143 CYS 143 ? ? ? A . A 1 144 ASP 144 ? ? ? A . A 1 145 PRO 145 ? ? ? A . A 1 146 CYS 146 ? ? ? A . A 1 147 PRO 147 ? ? ? A . A 1 148 ILE 148 ? ? ? A . A 1 149 GLY 149 ? ? ? A . A 1 150 PHE 150 ? ? ? A . A 1 151 PHE 151 ? ? ? A . A 1 152 SER 152 ? ? ? A . A 1 153 ASN 153 ? ? ? A . A 1 154 VAL 154 ? ? ? A . A 1 155 SER 155 ? ? ? A . A 1 156 SER 156 ? ? ? A . A 1 157 ALA 157 ? ? ? A . A 1 158 LEU 158 ? ? ? A . A 1 159 GLU 159 ? ? ? A . A 1 160 LYS 160 ? ? ? A . A 1 161 CYS 161 ? ? ? A . A 1 162 HIS 162 ? ? ? A . A 1 163 PRO 163 ? ? ? A . A 1 164 TRP 164 ? ? ? A . A 1 165 THR 165 ? ? ? A . A 1 166 SER 166 ? ? ? A . A 1 167 CYS 167 ? ? ? A . A 1 168 GLU 168 ? ? ? A . A 1 169 THR 169 ? ? ? A . A 1 170 LYS 170 ? ? ? A . A 1 171 GLY 171 ? ? ? A . A 1 172 LEU 172 ? ? ? A . A 1 173 VAL 173 ? ? ? A . A 1 174 LYS 174 ? ? ? A . A 1 175 VAL 175 ? ? ? A . A 1 176 GLN 176 ? ? ? A . A 1 177 ALA 177 ? ? ? A . A 1 178 GLY 178 ? ? ? A . A 1 179 THR 179 ? ? ? A . A 1 180 ASN 180 ? ? ? A . A 1 181 LYS 181 ? ? ? A . A 1 182 THR 182 ? ? ? A . A 1 183 ASP 183 ? ? ? A . A 1 184 VAL 184 ? ? ? A . A 1 185 ILE 185 ? ? ? A . A 1 186 CYS 186 ? ? ? A . A 1 187 GLY 187 ? ? ? A . A 1 188 PRO 188 ? ? ? A . A 1 189 GLN 189 ? ? ? A . A 1 190 PRO 190 ? ? ? A . A 1 191 ARG 191 ? ? ? A . A 1 192 LEU 192 ? ? ? A . A 1 193 ARG 193 ? ? ? A . A 1 194 ALA 194 ? ? ? A . A 1 195 LEU 195 ? ? ? A . A 1 196 VAL 196 196 VAL VAL A . A 1 197 VAL 197 197 VAL VAL A . A 1 198 VAL 198 198 VAL VAL A . A 1 199 PRO 199 199 PRO PRO A . A 1 200 ILE 200 200 ILE ILE A . A 1 201 ILE 201 201 ILE ILE A . A 1 202 MET 202 202 MET MET A . A 1 203 GLY 203 203 GLY GLY A . A 1 204 ILE 204 204 ILE ILE A . A 1 205 LEU 205 205 LEU LEU A . A 1 206 LEU 206 206 LEU LEU A . A 1 207 VAL 207 207 VAL VAL A . A 1 208 VAL 208 208 VAL VAL A . A 1 209 LEU 209 209 LEU LEU A . A 1 210 LEU 210 210 LEU LEU A . A 1 211 VAL 211 211 VAL VAL A . A 1 212 SER 212 212 SER SER A . A 1 213 ALA 213 213 ALA ALA A . A 1 214 CYS 214 214 CYS CYS A . A 1 215 ILE 215 215 ILE ILE A . A 1 216 ARG 216 216 ARG ARG A . A 1 217 LYS 217 217 LYS LYS A . A 1 218 VAL 218 218 VAL VAL A . A 1 219 VAL 219 219 VAL VAL A . A 1 220 LYS 220 220 LYS LYS A . A 1 221 LYS 221 ? ? ? A . A 1 222 PRO 222 ? ? ? A . A 1 223 GLU 223 ? ? ? A . A 1 224 ASN 224 ? ? ? A . A 1 225 LYS 225 ? ? ? A . A 1 226 VAL 226 ? ? ? A . A 1 227 MET 227 ? ? ? A . A 1 228 TYR 228 ? ? ? A . A 1 229 GLN 229 ? ? ? A . A 1 230 ASP 230 ? ? ? A . A 1 231 PRO 231 ? ? ? A . A 1 232 VAL 232 ? ? ? A . A 1 233 GLU 233 ? ? ? A . A 1 234 ASP 234 ? ? ? A . A 1 235 LEU 235 ? ? ? A . A 1 236 GLU 236 ? ? ? A . A 1 237 GLU 237 ? ? ? A . A 1 238 PHE 238 ? ? ? A . A 1 239 PRO 239 ? ? ? A . A 1 240 MET 240 ? ? ? A . A 1 241 PRO 241 ? ? ? A . A 1 242 PRO 242 ? ? ? A . A 1 243 HIS 243 ? ? ? A . A 1 244 SER 244 ? ? ? A . A 1 245 ILE 245 ? ? ? A . A 1 246 ALA 246 ? ? ? A . A 1 247 PRO 247 ? ? ? A . A 1 248 VAL 248 ? ? ? A . A 1 249 GLN 249 ? ? ? A . A 1 250 GLU 250 ? ? ? A . A 1 251 THR 251 ? ? ? A . A 1 252 LEU 252 ? ? ? A . A 1 253 HIS 253 ? ? ? A . A 1 254 GLY 254 ? ? ? A . A 1 255 CYS 255 ? ? ? A . A 1 256 GLN 256 ? ? ? A . A 1 257 PRO 257 ? ? ? A . A 1 258 VAL 258 ? ? ? A . A 1 259 THR 259 ? ? ? A . A 1 260 GLN 260 ? ? ? A . A 1 261 GLU 261 ? ? ? A . A 1 262 ASP 262 ? ? ? A . A 1 263 GLY 263 ? ? ? A . A 1 264 LYS 264 ? ? ? A . A 1 265 GLU 265 ? ? ? A . A 1 266 SER 266 ? ? ? A . A 1 267 ARG 267 ? ? ? A . A 1 268 ILE 268 ? ? ? A . A 1 269 SER 269 ? ? ? A . A 1 270 VAL 270 ? ? ? A . A 1 271 GLN 271 ? ? ? A . A 1 272 GLU 272 ? ? ? A . A 1 273 ARG 273 ? ? ? A . A 1 274 VAL 274 ? ? ? A . # # loop_ _ma_data.id _ma_data.name _ma_data.content_type _ma_data.content_type_other_details 1 'Syndecan-2 {PDB ID=6ith, label_asym_id=A, auth_asym_id=A, SMTL ID=6ith.1.A}' 'template structure' . 2 . target . 3 'Target-template alignment by HHblits to 6ith, label_asym_id=A' 'target-template alignment' . 4 'model 3' 'model coordinates' . 5 SMTL 'reference database' . 6 PDB 'reference database' . 7 'Template search output' other 'Results of the sequence search' # # loop_ _ma_data_group.ordinal_id _ma_data_group.group_id _ma_data_group.data_id 1 1 2 2 1 5 3 1 6 4 2 7 5 3 2 6 3 1 7 3 3 8 4 1 9 4 3 10 5 4 # # loop_ _ma_data_ref_db.data_id _ma_data_ref_db.name _ma_data_ref_db.location_url _ma_data_ref_db.version _ma_data_ref_db.release_date 5 SMTL https://swissmodel.expasy.org/templates/ . 2025-01-15 6 PDB https://www.wwpdb.org . 2025-01-10 # # loop_ _ma_target_entity.entity_id _ma_target_entity.data_id _ma_target_entity.origin 1 2 'reference database' # # loop_ _ma_target_entity_instance.asym_id _ma_target_entity_instance.entity_id _ma_target_entity_instance.details A 1 . # # loop_ _ma_template_trans_matrix.id _ma_template_trans_matrix.rot_matrix[1][1] _ma_template_trans_matrix.rot_matrix[2][1] _ma_template_trans_matrix.rot_matrix[3][1] _ma_template_trans_matrix.rot_matrix[1][2] _ma_template_trans_matrix.rot_matrix[2][2] _ma_template_trans_matrix.rot_matrix[3][2] _ma_template_trans_matrix.rot_matrix[1][3] _ma_template_trans_matrix.rot_matrix[2][3] _ma_template_trans_matrix.rot_matrix[3][3] _ma_template_trans_matrix.tr_vector[1] _ma_template_trans_matrix.tr_vector[2] _ma_template_trans_matrix.tr_vector[3] 1 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0 0 0 # # loop_ _ma_template_details.ordinal_id _ma_template_details.template_id _ma_template_details.template_origin _ma_template_details.template_entity_type _ma_template_details.template_trans_matrix_id _ma_template_details.template_data_id _ma_template_details.target_asym_id _ma_template_details.template_label_asym_id _ma_template_details.template_label_entity_id _ma_template_details.template_model_num _ma_template_details.template_auth_asym_id 1 1 'reference database' polymer 1 1 A A 1 1 A # # loop_ _ma_template_poly.template_id _ma_template_poly.seq_one_letter_code _ma_template_poly.seq_one_letter_code_can 1 MEQSTEVLAAVIAGGVIGFLFAIFLILLLVYRMRKHHHHHH MEQSTEVLAAVIAGGVIGFLFAIFLILLLVYRMRKHHHHHH # # loop_ _ma_template_poly_segment.id _ma_template_poly_segment.template_id _ma_template_poly_segment.residue_number_begin _ma_template_poly_segment.residue_number_end 1 1 11 35 # # loop_ _ma_template_ref_db_details.template_id _ma_template_ref_db_details.db_name _ma_template_ref_db_details.db_name_other_details _ma_template_ref_db_details.db_accession_code _ma_template_ref_db_details.db_version_date 1 PDB . 6ith 2024-05-15 # # loop_ _ma_target_template_poly_mapping.id _ma_target_template_poly_mapping.template_segment_id _ma_target_template_poly_mapping.target_asym_id _ma_target_template_poly_mapping.target_seq_id_begin _ma_target_template_poly_mapping.target_seq_id_end 1 1 A 1 274 # # loop_ _ma_alignment_info.alignment_id _ma_alignment_info.data_id _ma_alignment_info.software_group_id _ma_alignment_info.alignment_length _ma_alignment_info.alignment_type _ma_alignment_info.alignment_mode 1 3 1 274 'target-template pairwise alignment' local # # loop_ _ma_alignment_details.ordinal_id _ma_alignment_details.alignment_id _ma_alignment_details.template_segment_id _ma_alignment_details.target_asym_id _ma_alignment_details.score_type _ma_alignment_details.score_type_other_details _ma_alignment_details.score_value _ma_alignment_details.percent_sequence_identity _ma_alignment_details.sequence_identity_denominator _ma_alignment_details.sequence_identity_denominator_other_details 1 1 1 A 'HHblits e-value' . 0.530 20.000 'Number of aligned residue pairs (not including the gaps)' . # # loop_ _ma_alignment.ordinal_id _ma_alignment.alignment_id _ma_alignment.target_template_flag _ma_alignment.sequence 1 1 1 MVLLPLRCLFWGSLLTTVYPEPRTACREKQYLVDSQCCNMCPPGEKLVNDCLHTIDTECTRCQTGEFLDTWNAERHCHQHKYCDPNLGLHVEKEGTSETDTTCTCDEGLHCTNAACESCTMHSLCPPGLGVKQIATGISDTICDPCPIGFFSNVSSALEKCHPWTSCETKGLVKVQAGTNKTDVICGPQPRLRALVVVPIIMGILLVVLLVSACIRKVVKKPENKVMYQDPVEDLEEFPMPPHSIAPVQETLHGCQPVTQEDGKESRISVQERV 2 1 2 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VIAGGVIGFLFAIFLILLLVYRMRK------------------------------------------------------ # # loop_ _ma_protocol_step.ordinal_id _ma_protocol_step.protocol_id _ma_protocol_step.step_id _ma_protocol_step.method_type _ma_protocol_step.step_name _ma_protocol_step.details _ma_protocol_step.software_group_id _ma_protocol_step.input_data_group_id _ma_protocol_step.output_data_group_id 1 1 1 'template search' 'template search' 'SWISS-MODEL template search in PDB' 2 1 2 2 1 2 'template selection' 'template selection' 'Automatic template selection by SWISS-MODEL' 3 2 4 3 1 3 modeling 'homology modeling' 'SWISS-MODEL auto-model mode using ProMod3 on 6ith.1' 4 3 5 # # loop_ _ma_model_list.ordinal_id _ma_model_list.model_id _ma_model_list.model_group_id _ma_model_list.model_name _ma_model_list.model_group_name _ma_model_list.data_id _ma_model_list.model_type _ma_model_list.model_type_other_details 1 1 1 'model 3' . 4 'Homology model' . # # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_alt_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.auth_seq_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.label_entity_id _atom_site.auth_asym_id _atom_site.auth_comp_id _atom_site.B_iso_or_equiv _atom_site.pdbx_PDB_model_num ATOM 1 N N . VAL 196 196 ? A 4.930 9.613 5.961 1 1 A VAL 0.740 1 ATOM 2 C CA . VAL 196 196 ? A 3.754 9.378 6.889 1 1 A VAL 0.740 1 ATOM 3 C C . VAL 196 196 ? A 4.129 8.813 8.253 1 1 A VAL 0.740 1 ATOM 4 O O . VAL 196 196 ? A 3.845 9.455 9.257 1 1 A VAL 0.740 1 ATOM 5 C CB . VAL 196 196 ? A 2.652 8.573 6.199 1 1 A VAL 0.740 1 ATOM 6 C CG1 . VAL 196 196 ? A 1.392 8.539 7.093 1 1 A VAL 0.740 1 ATOM 7 C CG2 . VAL 196 196 ? A 2.281 9.227 4.849 1 1 A VAL 0.740 1 ATOM 8 N N . VAL 197 197 ? A 4.835 7.659 8.354 1 1 A VAL 0.780 1 ATOM 9 C CA . VAL 197 197 ? A 5.264 7.074 9.629 1 1 A VAL 0.780 1 ATOM 10 C C . VAL 197 197 ? A 6.073 8.020 10.515 1 1 A VAL 0.780 1 ATOM 11 O O . VAL 197 197 ? A 5.737 8.231 11.678 1 1 A VAL 0.780 1 ATOM 12 C CB . VAL 197 197 ? A 6.102 5.838 9.321 1 1 A VAL 0.780 1 ATOM 13 C CG1 . VAL 197 197 ? A 6.659 5.194 10.608 1 1 A VAL 0.780 1 ATOM 14 C CG2 . VAL 197 197 ? A 5.226 4.823 8.559 1 1 A VAL 0.780 1 ATOM 15 N N . VAL 198 198 ? A 7.118 8.675 9.952 1 1 A VAL 0.730 1 ATOM 16 C CA . VAL 198 198 ? A 7.885 9.719 10.637 1 1 A VAL 0.730 1 ATOM 17 C C . VAL 198 198 ? A 7.014 10.888 11.167 1 1 A VAL 0.730 1 ATOM 18 O O . VAL 198 198 ? A 7.050 11.099 12.359 1 1 A VAL 0.730 1 ATOM 19 C CB . VAL 198 198 ? A 9.079 10.198 9.785 1 1 A VAL 0.730 1 ATOM 20 C CG1 . VAL 198 198 ? A 9.852 11.339 10.489 1 1 A VAL 0.730 1 ATOM 21 C CG2 . VAL 198 198 ? A 10.023 9.021 9.427 1 1 A VAL 0.730 1 ATOM 22 N N . PRO 199 199 ? A 6.164 11.611 10.389 1 1 A PRO 0.690 1 ATOM 23 C CA . PRO 199 199 ? A 5.218 12.588 10.932 1 1 A PRO 0.690 1 ATOM 24 C C . PRO 199 199 ? A 4.334 12.101 12.072 1 1 A PRO 0.690 1 ATOM 25 O O . PRO 199 199 ? A 4.140 12.851 13.017 1 1 A PRO 0.690 1 ATOM 26 C CB . PRO 199 199 ? A 4.358 13.028 9.732 1 1 A PRO 0.690 1 ATOM 27 C CG . PRO 199 199 ? A 5.193 12.730 8.480 1 1 A PRO 0.690 1 ATOM 28 C CD . PRO 199 199 ? A 6.228 11.690 8.930 1 1 A PRO 0.690 1 ATOM 29 N N . ILE 200 200 ? A 3.775 10.868 11.982 1 1 A ILE 0.680 1 ATOM 30 C CA . ILE 200 200 ? A 2.924 10.280 13.019 1 1 A ILE 0.680 1 ATOM 31 C C . ILE 200 200 ? A 3.695 10.088 14.311 1 1 A ILE 0.680 1 ATOM 32 O O . ILE 200 200 ? A 3.285 10.596 15.351 1 1 A ILE 0.680 1 ATOM 33 C CB . ILE 200 200 ? A 2.301 8.950 12.562 1 1 A ILE 0.680 1 ATOM 34 C CG1 . ILE 200 200 ? A 1.312 9.188 11.399 1 1 A ILE 0.680 1 ATOM 35 C CG2 . ILE 200 200 ? A 1.562 8.224 13.714 1 1 A ILE 0.680 1 ATOM 36 C CD1 . ILE 200 200 ? A 0.909 7.888 10.693 1 1 A ILE 0.680 1 ATOM 37 N N . ILE 201 201 ? A 4.872 9.422 14.278 1 1 A ILE 0.720 1 ATOM 38 C CA . ILE 201 201 ? A 5.687 9.184 15.467 1 1 A ILE 0.720 1 ATOM 39 C C . ILE 201 201 ? A 6.142 10.484 16.094 1 1 A ILE 0.720 1 ATOM 40 O O . ILE 201 201 ? A 5.962 10.699 17.292 1 1 A ILE 0.720 1 ATOM 41 C CB . ILE 201 201 ? A 6.898 8.300 15.161 1 1 A ILE 0.720 1 ATOM 42 C CG1 . ILE 201 201 ? A 6.415 6.889 14.746 1 1 A ILE 0.720 1 ATOM 43 C CG2 . ILE 201 201 ? A 7.863 8.218 16.375 1 1 A ILE 0.720 1 ATOM 44 C CD1 . ILE 201 201 ? A 7.532 6.026 14.149 1 1 A ILE 0.720 1 ATOM 45 N N . MET 202 202 ? A 6.676 11.419 15.280 1 1 A MET 0.710 1 ATOM 46 C CA . MET 202 202 ? A 7.106 12.719 15.751 1 1 A MET 0.710 1 ATOM 47 C C . MET 202 202 ? A 5.966 13.524 16.337 1 1 A MET 0.710 1 ATOM 48 O O . MET 202 202 ? A 6.076 14.039 17.448 1 1 A MET 0.710 1 ATOM 49 C CB . MET 202 202 ? A 7.770 13.524 14.605 1 1 A MET 0.710 1 ATOM 50 C CG . MET 202 202 ? A 9.123 12.942 14.142 1 1 A MET 0.710 1 ATOM 51 S SD . MET 202 202 ? A 10.396 12.839 15.442 1 1 A MET 0.710 1 ATOM 52 C CE . MET 202 202 ? A 10.646 14.626 15.655 1 1 A MET 0.710 1 ATOM 53 N N . GLY 203 203 ? A 4.805 13.592 15.654 1 1 A GLY 0.710 1 ATOM 54 C CA . GLY 203 203 ? A 3.656 14.326 16.157 1 1 A GLY 0.710 1 ATOM 55 C C . GLY 203 203 ? A 3.103 13.753 17.435 1 1 A GLY 0.710 1 ATOM 56 O O . GLY 203 203 ? A 2.856 14.497 18.379 1 1 A GLY 0.710 1 ATOM 57 N N . ILE 204 204 ? A 2.958 12.415 17.542 1 1 A ILE 0.690 1 ATOM 58 C CA . ILE 204 204 ? A 2.536 11.749 18.774 1 1 A ILE 0.690 1 ATOM 59 C C . ILE 204 204 ? A 3.489 12.024 19.921 1 1 A ILE 0.690 1 ATOM 60 O O . ILE 204 204 ? A 3.053 12.431 20.999 1 1 A ILE 0.690 1 ATOM 61 C CB . ILE 204 204 ? A 2.374 10.240 18.573 1 1 A ILE 0.690 1 ATOM 62 C CG1 . ILE 204 204 ? A 1.145 9.980 17.674 1 1 A ILE 0.690 1 ATOM 63 C CG2 . ILE 204 204 ? A 2.241 9.458 19.909 1 1 A ILE 0.690 1 ATOM 64 C CD1 . ILE 204 204 ? A 1.097 8.540 17.157 1 1 A ILE 0.690 1 ATOM 65 N N . LEU 205 205 ? A 4.817 11.887 19.708 1 1 A LEU 0.710 1 ATOM 66 C CA . LEU 205 205 ? A 5.811 12.159 20.735 1 1 A LEU 0.710 1 ATOM 67 C C . LEU 205 205 ? A 5.731 13.587 21.258 1 1 A LEU 0.710 1 ATOM 68 O O . LEU 205 205 ? A 5.657 13.812 22.464 1 1 A LEU 0.710 1 ATOM 69 C CB . LEU 205 205 ? A 7.241 11.858 20.210 1 1 A LEU 0.710 1 ATOM 70 C CG . LEU 205 205 ? A 7.911 10.645 20.887 1 1 A LEU 0.710 1 ATOM 71 C CD1 . LEU 205 205 ? A 7.224 9.316 20.524 1 1 A LEU 0.710 1 ATOM 72 C CD2 . LEU 205 205 ? A 9.401 10.610 20.516 1 1 A LEU 0.710 1 ATOM 73 N N . LEU 206 206 ? A 5.656 14.580 20.351 1 1 A LEU 0.680 1 ATOM 74 C CA . LEU 206 206 ? A 5.508 15.983 20.700 1 1 A LEU 0.680 1 ATOM 75 C C . LEU 206 206 ? A 4.243 16.292 21.484 1 1 A LEU 0.680 1 ATOM 76 O O . LEU 206 206 ? A 4.295 17.010 22.481 1 1 A LEU 0.680 1 ATOM 77 C CB . LEU 206 206 ? A 5.510 16.864 19.433 1 1 A LEU 0.680 1 ATOM 78 C CG . LEU 206 206 ? A 6.853 16.891 18.677 1 1 A LEU 0.680 1 ATOM 79 C CD1 . LEU 206 206 ? A 6.660 17.592 17.323 1 1 A LEU 0.680 1 ATOM 80 C CD2 . LEU 206 206 ? A 7.990 17.527 19.496 1 1 A LEU 0.680 1 ATOM 81 N N . VAL 207 207 ? A 3.083 15.728 21.081 1 1 A VAL 0.590 1 ATOM 82 C CA . VAL 207 207 ? A 1.824 15.880 21.807 1 1 A VAL 0.590 1 ATOM 83 C C . VAL 207 207 ? A 1.920 15.321 23.222 1 1 A VAL 0.590 1 ATOM 84 O O . VAL 207 207 ? A 1.594 16.014 24.185 1 1 A VAL 0.590 1 ATOM 85 C CB . VAL 207 207 ? A 0.657 15.227 21.056 1 1 A VAL 0.590 1 ATOM 86 C CG1 . VAL 207 207 ? A -0.655 15.236 21.873 1 1 A VAL 0.590 1 ATOM 87 C CG2 . VAL 207 207 ? A 0.403 16.002 19.748 1 1 A VAL 0.590 1 ATOM 88 N N . VAL 208 208 ? A 2.445 14.087 23.400 1 1 A VAL 0.590 1 ATOM 89 C CA . VAL 208 208 ? A 2.625 13.467 24.713 1 1 A VAL 0.590 1 ATOM 90 C C . VAL 208 208 ? A 3.548 14.291 25.615 1 1 A VAL 0.590 1 ATOM 91 O O . VAL 208 208 ? A 3.213 14.569 26.766 1 1 A VAL 0.590 1 ATOM 92 C CB . VAL 208 208 ? A 3.128 12.023 24.588 1 1 A VAL 0.590 1 ATOM 93 C CG1 . VAL 208 208 ? A 3.426 11.393 25.968 1 1 A VAL 0.590 1 ATOM 94 C CG2 . VAL 208 208 ? A 2.046 11.175 23.885 1 1 A VAL 0.590 1 ATOM 95 N N . LEU 209 209 ? A 4.697 14.763 25.083 1 1 A LEU 0.580 1 ATOM 96 C CA . LEU 209 209 ? A 5.641 15.641 25.768 1 1 A LEU 0.580 1 ATOM 97 C C . LEU 209 209 ? A 5.065 16.982 26.188 1 1 A LEU 0.580 1 ATOM 98 O O . LEU 209 209 ? A 5.337 17.472 27.284 1 1 A LEU 0.580 1 ATOM 99 C CB . LEU 209 209 ? A 6.879 15.917 24.882 1 1 A LEU 0.580 1 ATOM 100 C CG . LEU 209 209 ? A 7.830 14.717 24.706 1 1 A LEU 0.580 1 ATOM 101 C CD1 . LEU 209 209 ? A 8.882 15.055 23.638 1 1 A LEU 0.580 1 ATOM 102 C CD2 . LEU 209 209 ? A 8.501 14.299 26.028 1 1 A LEU 0.580 1 ATOM 103 N N . LEU 210 210 ? A 4.246 17.622 25.336 1 1 A LEU 0.570 1 ATOM 104 C CA . LEU 210 210 ? A 3.528 18.825 25.707 1 1 A LEU 0.570 1 ATOM 105 C C . LEU 210 210 ? A 2.529 18.613 26.836 1 1 A LEU 0.570 1 ATOM 106 O O . LEU 210 210 ? A 2.533 19.349 27.824 1 1 A LEU 0.570 1 ATOM 107 C CB . LEU 210 210 ? A 2.808 19.403 24.464 1 1 A LEU 0.570 1 ATOM 108 C CG . LEU 210 210 ? A 3.420 20.726 23.966 1 1 A LEU 0.570 1 ATOM 109 C CD1 . LEU 210 210 ? A 3.974 20.571 22.541 1 1 A LEU 0.570 1 ATOM 110 C CD2 . LEU 210 210 ? A 2.387 21.860 24.065 1 1 A LEU 0.570 1 ATOM 111 N N . VAL 211 211 ? A 1.684 17.564 26.748 1 1 A VAL 0.570 1 ATOM 112 C CA . VAL 211 211 ? A 0.701 17.221 27.771 1 1 A VAL 0.570 1 ATOM 113 C C . VAL 211 211 ? A 1.365 16.893 29.100 1 1 A VAL 0.570 1 ATOM 114 O O . VAL 211 211 ? A 0.976 17.415 30.146 1 1 A VAL 0.570 1 ATOM 115 C CB . VAL 211 211 ? A -0.176 16.045 27.332 1 1 A VAL 0.570 1 ATOM 116 C CG1 . VAL 211 211 ? A -1.133 15.583 28.454 1 1 A VAL 0.570 1 ATOM 117 C CG2 . VAL 211 211 ? A -1.021 16.463 26.113 1 1 A VAL 0.570 1 ATOM 118 N N . SER 212 212 ? A 2.433 16.060 29.081 1 1 A SER 0.560 1 ATOM 119 C CA . SER 212 212 ? A 3.188 15.673 30.269 1 1 A SER 0.560 1 ATOM 120 C C . SER 212 212 ? A 3.847 16.857 30.938 1 1 A SER 0.560 1 ATOM 121 O O . SER 212 212 ? A 3.766 17.013 32.155 1 1 A SER 0.560 1 ATOM 122 C CB . SER 212 212 ? A 4.257 14.559 30.021 1 1 A SER 0.560 1 ATOM 123 O OG . SER 212 212 ? A 5.391 15.001 29.263 1 1 A SER 0.560 1 ATOM 124 N N . ALA 213 213 ? A 4.473 17.754 30.148 1 1 A ALA 0.600 1 ATOM 125 C CA . ALA 213 213 ? A 5.030 18.996 30.622 1 1 A ALA 0.600 1 ATOM 126 C C . ALA 213 213 ? A 3.998 19.936 31.216 1 1 A ALA 0.600 1 ATOM 127 O O . ALA 213 213 ? A 4.225 20.475 32.297 1 1 A ALA 0.600 1 ATOM 128 C CB . ALA 213 213 ? A 5.765 19.718 29.475 1 1 A ALA 0.600 1 ATOM 129 N N . CYS 214 214 ? A 2.837 20.145 30.565 1 1 A CYS 0.560 1 ATOM 130 C CA . CYS 214 214 ? A 1.762 20.960 31.109 1 1 A CYS 0.560 1 ATOM 131 C C . CYS 214 214 ? A 1.200 20.406 32.405 1 1 A CYS 0.560 1 ATOM 132 O O . CYS 214 214 ? A 1.139 21.136 33.391 1 1 A CYS 0.560 1 ATOM 133 C CB . CYS 214 214 ? A 0.606 21.139 30.090 1 1 A CYS 0.560 1 ATOM 134 S SG . CYS 214 214 ? A 1.062 22.200 28.681 1 1 A CYS 0.560 1 ATOM 135 N N . ILE 215 215 ? A 0.863 19.098 32.480 1 1 A ILE 0.430 1 ATOM 136 C CA . ILE 215 215 ? A 0.376 18.478 33.720 1 1 A ILE 0.430 1 ATOM 137 C C . ILE 215 215 ? A 1.428 18.616 34.825 1 1 A ILE 0.430 1 ATOM 138 O O . ILE 215 215 ? A 1.134 19.102 35.913 1 1 A ILE 0.430 1 ATOM 139 C CB . ILE 215 215 ? A -0.043 17.017 33.494 1 1 A ILE 0.430 1 ATOM 140 C CG1 . ILE 215 215 ? A -1.293 16.986 32.580 1 1 A ILE 0.430 1 ATOM 141 C CG2 . ILE 215 215 ? A -0.337 16.288 34.831 1 1 A ILE 0.430 1 ATOM 142 C CD1 . ILE 215 215 ? A -1.641 15.583 32.066 1 1 A ILE 0.430 1 ATOM 143 N N . ARG 216 216 ? A 2.698 18.282 34.531 1 1 A ARG 0.370 1 ATOM 144 C CA . ARG 216 216 ? A 3.837 18.391 35.438 1 1 A ARG 0.370 1 ATOM 145 C C . ARG 216 216 ? A 4.145 19.791 35.950 1 1 A ARG 0.370 1 ATOM 146 O O . ARG 216 216 ? A 4.531 19.972 37.102 1 1 A ARG 0.370 1 ATOM 147 C CB . ARG 216 216 ? A 5.117 17.859 34.757 1 1 A ARG 0.370 1 ATOM 148 C CG . ARG 216 216 ? A 6.337 17.772 35.699 1 1 A ARG 0.370 1 ATOM 149 C CD . ARG 216 216 ? A 7.603 17.227 35.037 1 1 A ARG 0.370 1 ATOM 150 N NE . ARG 216 216 ? A 7.993 18.193 33.948 1 1 A ARG 0.370 1 ATOM 151 C CZ . ARG 216 216 ? A 8.664 19.338 34.135 1 1 A ARG 0.370 1 ATOM 152 N NH1 . ARG 216 216 ? A 9.080 19.728 35.336 1 1 A ARG 0.370 1 ATOM 153 N NH2 . ARG 216 216 ? A 8.966 20.103 33.080 1 1 A ARG 0.370 1 ATOM 154 N N . LYS 217 217 ? A 4.028 20.828 35.108 1 1 A LYS 0.450 1 ATOM 155 C CA . LYS 217 217 ? A 4.162 22.205 35.538 1 1 A LYS 0.450 1 ATOM 156 C C . LYS 217 217 ? A 3.051 22.665 36.463 1 1 A LYS 0.450 1 ATOM 157 O O . LYS 217 217 ? A 3.322 23.420 37.388 1 1 A LYS 0.450 1 ATOM 158 C CB . LYS 217 217 ? A 4.240 23.180 34.351 1 1 A LYS 0.450 1 ATOM 159 C CG . LYS 217 217 ? A 5.566 23.080 33.591 1 1 A LYS 0.450 1 ATOM 160 C CD . LYS 217 217 ? A 5.522 23.950 32.330 1 1 A LYS 0.450 1 ATOM 161 C CE . LYS 217 217 ? A 6.763 23.791 31.455 1 1 A LYS 0.450 1 ATOM 162 N NZ . LYS 217 217 ? A 6.654 24.672 30.273 1 1 A LYS 0.450 1 ATOM 163 N N . VAL 218 218 ? A 1.797 22.220 36.230 1 1 A VAL 0.310 1 ATOM 164 C CA . VAL 218 218 ? A 0.624 22.497 37.064 1 1 A VAL 0.310 1 ATOM 165 C C . VAL 218 218 ? A 0.698 21.817 38.445 1 1 A VAL 0.310 1 ATOM 166 O O . VAL 218 218 ? A 0.037 22.260 39.378 1 1 A VAL 0.310 1 ATOM 167 C CB . VAL 218 218 ? A -0.680 22.110 36.335 1 1 A VAL 0.310 1 ATOM 168 C CG1 . VAL 218 218 ? A -1.950 22.303 37.196 1 1 A VAL 0.310 1 ATOM 169 C CG2 . VAL 218 218 ? A -0.861 22.984 35.077 1 1 A VAL 0.310 1 ATOM 170 N N . VAL 219 219 ? A 1.531 20.760 38.639 1 1 A VAL 0.160 1 ATOM 171 C CA . VAL 219 219 ? A 1.760 20.057 39.923 1 1 A VAL 0.160 1 ATOM 172 C C . VAL 219 219 ? A 2.205 20.976 41.066 1 1 A VAL 0.160 1 ATOM 173 O O . VAL 219 219 ? A 1.990 20.674 42.244 1 1 A VAL 0.160 1 ATOM 174 C CB . VAL 219 219 ? A 2.795 18.912 39.778 1 1 A VAL 0.160 1 ATOM 175 C CG1 . VAL 219 219 ? A 3.167 18.195 41.105 1 1 A VAL 0.160 1 ATOM 176 C CG2 . VAL 219 219 ? A 2.265 17.840 38.809 1 1 A VAL 0.160 1 ATOM 177 N N . LYS 220 220 ? A 2.866 22.092 40.723 1 1 A LYS 0.210 1 ATOM 178 C CA . LYS 220 220 ? A 3.358 23.102 41.637 1 1 A LYS 0.210 1 ATOM 179 C C . LYS 220 220 ? A 2.341 23.972 42.437 1 1 A LYS 0.210 1 ATOM 180 O O . LYS 220 220 ? A 1.121 23.944 42.178 1 1 A LYS 0.210 1 ATOM 181 C CB . LYS 220 220 ? A 4.195 24.128 40.832 1 1 A LYS 0.210 1 ATOM 182 C CG . LYS 220 220 ? A 3.337 25.119 40.002 1 1 A LYS 0.210 1 ATOM 183 C CD . LYS 220 220 ? A 4.171 26.006 39.067 1 1 A LYS 0.210 1 ATOM 184 C CE . LYS 220 220 ? A 4.990 27.050 39.825 1 1 A LYS 0.210 1 ATOM 185 N NZ . LYS 220 220 ? A 6.353 27.114 39.257 1 1 A LYS 0.210 1 ATOM 186 O OXT . LYS 220 220 ? A 2.858 24.770 43.277 1 1 A LYS 0.210 1 # # loop_ _atom_type.symbol C N O S # # loop_ _ma_qa_metric.id _ma_qa_metric.name _ma_qa_metric.description _ma_qa_metric.type _ma_qa_metric.mode _ma_qa_metric.type_other_details _ma_qa_metric.software_group_id 1 QMEANDisCo 'Predicted accuracy according to all-atom lDDT in [0,1].' 'pLDDT all-atom in [0,1]' local . 5 2 QMEANDisCo 'Predicted accuracy according to all-atom lDDT in [0,1].' 'pLDDT all-atom in [0,1]' global . 5 3 GMQE 'Global Model Quality Estimate of the model accuracy, calculated by SWISS-MODEL.' 'normalized score' global . 6 # # loop_ _ma_qa_metric_global.ordinal_id _ma_qa_metric_global.model_id _ma_qa_metric_global.metric_id _ma_qa_metric_global.metric_value 1 1 2 0.576 2 1 3 0.006 # # loop_ _ma_qa_metric_local.ordinal_id _ma_qa_metric_local.model_id _ma_qa_metric_local.label_asym_id _ma_qa_metric_local.label_seq_id _ma_qa_metric_local.label_comp_id _ma_qa_metric_local.metric_id _ma_qa_metric_local.metric_value 1 1 A 196 VAL 1 0.740 2 1 A 197 VAL 1 0.780 3 1 A 198 VAL 1 0.730 4 1 A 199 PRO 1 0.690 5 1 A 200 ILE 1 0.680 6 1 A 201 ILE 1 0.720 7 1 A 202 MET 1 0.710 8 1 A 203 GLY 1 0.710 9 1 A 204 ILE 1 0.690 10 1 A 205 LEU 1 0.710 11 1 A 206 LEU 1 0.680 12 1 A 207 VAL 1 0.590 13 1 A 208 VAL 1 0.590 14 1 A 209 LEU 1 0.580 15 1 A 210 LEU 1 0.570 16 1 A 211 VAL 1 0.570 17 1 A 212 SER 1 0.560 18 1 A 213 ALA 1 0.600 19 1 A 214 CYS 1 0.560 20 1 A 215 ILE 1 0.430 21 1 A 216 ARG 1 0.370 22 1 A 217 LYS 1 0.450 23 1 A 218 VAL 1 0.310 24 1 A 219 VAL 1 0.160 25 1 A 220 LYS 1 0.210 # # loop_ _pdbx_data_usage.id _pdbx_data_usage.type _pdbx_data_usage.details _pdbx_data_usage.url 1 license ;This SWISS-MODEL protein model is copyright. 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