data_SMR-344f39a0c9e5455d39b417f79a526074_1 _entry.id SMR-344f39a0c9e5455d39b417f79a526074_1 _struct.entry_id SMR-344f39a0c9e5455d39b417f79a526074_1 _struct.pdbx_model_details ;This model was generated unsupervised by the SWISS-MODEL homology-modelling pipeline for the SWISS-MODEL Repository, a database of annotated 3D protein structure models. The modelled monomer covers following UniProtKB entries: - Q9UD71 (isoform 2)/ PPR1B_HUMAN, Protein phosphatase 1 regulatory subunit 1B Estimated model accuracy of this model is 0.03, calculated by SWISS-MODEL as Global Model Quality Estimate (GMQE). ; _struct.pdbx_structure_determination_methodology computational _struct.title 'Model for UniProtKB entries Q9UD71 (isoform 2)' _audit_conform.dict_location https://raw.githubusercontent.com/ihmwg/ModelCIF/d18ba38/base/mmcif_ma-core.dic _audit_conform.dict_name mmcif_ma.dic _audit_conform.dict_version 1.4.6 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary 'The SWISS-MODEL Repository - new features and functionality' 'Nucleic Acids Res.' 45 D313 D319 2017 27899672 10.1093/nar/gkw1132 2 'SWISS-MODEL: homology modelling of protein structures and complexes' 'Nucleic Acids Res.' 46 W296 W303 2018 29788355 10.1093/nar/gky427 3 'ProMod3 - A versatile homology modelling toolbox' 'PLoS Comput. Biol.' 17(1) 1 18 2021 33507980 10.1371/journal.pcbi.1008667 4 'QMEANDisCo - distance constraints applied on model quality estimation' Bioinformatics 36 1765 1771 2020 31697312 10.1093/bioinformatics/btz828 5 'OpenStructure: an integrated software framework for computational structural biology' 'Acta Crystallogr., Sect. D: Biol. Crystallogr.' 69 701 709 2013 23633579 10.1107/S0907444913007051 6 'BLAST+: architecture and applications' 'BMC Bioinf.' 10 421 . 2009 20003500 10.1186/1471-2105-10-421 7 'HH-suite3 for fast remote homology detection and deep protein annotation' 'BMC Bioinf.' 20 473 . 2019 31521110 10.1186/s12859-019-3019-7 # # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Bienert, S.' 1 primary 'Waterhouse, A.' 2 primary 'de Beer, T.A.P.' 3 primary 'Tauriello, G.' 4 primary 'Studer, G.' 5 primary 'Bordoli, L.' 6 primary 'Schwede, T.' 7 2 'Waterhouse, A.' 8 2 'Bertoni, M.' 9 2 'Bienert, S.' 10 2 'Studer, G.' 11 2 'Tauriello, G.' 12 2 'Gumienny, R.' 13 2 'Heer, F.T.' 14 2 'de Beer, T.A.P.' 15 2 'Rempfer, C.' 16 2 'Bordoli, L.' 17 2 'Lepore, R.' 18 2 'Schwede, T.' 19 3 'Studer, G.' 20 3 'Tauriello, G.' 21 3 'Bienert, S.' 22 3 'Biasini, M.' 23 3 'Johner, N.' 24 3 'Schwede, T.' 25 4 'Studer, G.' 26 4 'Rempfer, C.' 27 4 'Waterhouse, A.M.' 28 4 'Gumienny, R.' 29 4 'Haas, J.' 30 4 'Schwede, T.' 31 5 'Biasini, M.' 32 5 'Schmidt, T.' 33 5 'Bienert, S.' 34 5 'Mariani, V.' 35 5 'Studer, G.' 36 5 'Haas, J.' 37 5 'Johner, N.' 38 5 'Schenk, A.D.' 39 5 'Philippsen, A.' 40 5 'Schwede, T.' 41 6 'Camacho, C.' 42 6 'Coulouris, G.' 43 6 'Avagyan, V.' 44 6 'Ma, N.' 45 6 'Papadopoulos, J.' 46 6 'Bealer, K.' 47 6 'Madden, T.L.' 48 7 'Steinegger, M.' 49 7 'Meier, M.' 50 7 'Mirdita, M.' 51 7 'Vohringer, H.' 52 7 'Haunsberger, S.J.' 53 7 'Soding, J.' 54 # # loop_ _software.pdbx_ordinal _software.name _software.classification _software.description _software.version _software.type _software.location _software.citation_id 1 SWISS-MODEL 'model building' 'Homology modelling web service' 3ef406dae3f6eb8b74980f2a6e69a2109acde4aa package https://swissmodel.expasy.org 2 2 ProMod3 'model building' 'Modular homology modelling engine' 3.4.1 library https://git.scicore.unibas.ch/schwede/ProMod3 3 3 QMEAN 'model building' 'QMEAN - Qualitative Model Energy ANalysis' 4.3.1 library https://git.scicore.unibas.ch/schwede/QMEAN 4 4 OpenStructure 'data processing' 'Open-Source Computational Structural Biology Framework' 2.8.0 package https://openstructure.org/ 5 5 BLAST 'data collection' . 2.2.31 package https://blast.ncbi.nlm.nih.gov 6 6 HH-suite 'data collection' 'HH-suite3 for sensitive sequence searching' 3.2.0 package https://github.com/soedinglab/hh-suite 7 # # loop_ _ma_software_group.ordinal_id _ma_software_group.group_id _ma_software_group.software_id _ma_software_group.parameter_group_id 1 1 6 . 2 2 1 . 3 2 4 . 4 2 5 . 5 2 6 . 6 3 1 . 7 3 4 . 8 4 1 . 9 4 2 . 10 4 4 . 11 5 3 . 12 6 1 . 13 6 3 . 14 6 4 . # # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Bienert, S.' 1 'Waterhouse, A.' 2 'de Beer, T.A.P.' 3 'Tauriello, G.' 4 'Studer, G.' 5 'Bordoli, L.' 6 'Schwede, T.' 7 # # loop_ _chem_comp.id _chem_comp.type _chem_comp.name _chem_comp.formula _chem_comp.formula_weight _chem_comp.ma_provenance ALA 'L-peptide linking' ALANINE 'C3 H7 N O2' 89.094 'CCD Core' ARG 'L-peptide linking' ARGININE 'C6 H15 N4 O2 1' 175.212 'CCD Core' ASN 'L-peptide linking' ASPARAGINE 'C4 H8 N2 O3' 132.119 'CCD Core' ASP 'L-peptide linking' 'ASPARTIC ACID' 'C4 H7 N O4' 133.103 'CCD Core' CYS 'L-peptide linking' CYSTEINE 'C3 H7 N O2 S' 121.154 'CCD Core' GLN 'L-peptide linking' GLUTAMINE 'C5 H10 N2 O3' 146.146 'CCD Core' GLU 'L-peptide linking' 'GLUTAMIC ACID' 'C5 H9 N O4' 147.130 'CCD Core' GLY 'peptide linking' GLYCINE 'C2 H5 N O2' 75.067 'CCD Core' HIS 'L-peptide linking' HISTIDINE 'C6 H10 N3 O2 1' 156.165 'CCD Core' ILE 'L-peptide linking' ISOLEUCINE 'C6 H13 N O2' 131.175 'CCD Core' LEU 'L-peptide linking' LEUCINE 'C6 H13 N O2' 131.175 'CCD Core' LYS 'L-peptide linking' LYSINE 'C6 H15 N2 O2 1' 147.198 'CCD Core' MET 'L-peptide linking' METHIONINE 'C5 H11 N O2 S' 149.208 'CCD Core' PHE 'L-peptide linking' PHENYLALANINE 'C9 H11 N O2' 165.192 'CCD Core' PRO 'L-peptide linking' PROLINE 'C5 H9 N O2' 115.132 'CCD Core' SER 'L-peptide linking' SERINE 'C3 H7 N O3' 105.093 'CCD Core' THR 'L-peptide linking' THREONINE 'C4 H9 N O3' 119.120 'CCD Core' TRP 'L-peptide linking' TRYPTOPHAN 'C11 H12 N2 O2' 204.229 'CCD Core' TYR 'L-peptide linking' TYROSINE 'C9 H11 N O3' 181.191 'CCD Core' VAL 'L-peptide linking' VALINE 'C5 H11 N O2' 117.148 'CCD Core' # # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.details 1 polymer man . 21766.497 1 . # # loop_ _struct_ref.id _struct_ref.entity_id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_align_begin _struct_ref.pdbx_seq_one_letter_code _struct_ref.details 1 1 UNP PPR1B_HUMAN Q9UD71 1 ;MLFRLSEHSSPEEEASPHQRASGEGHHLKSKRPNPCAYTPPSLKAVQRIAESHLQSISNLNENQASEEED ELGELRELGYPREEDEEEEEDDEEEEEEEDSQAEVLKVIRQSAGQKTTCGQGLEGPWERPPPLDESERDG GSEDQVEDPALSEPGEEPQRPSPSEPGT ; 'Protein phosphatase 1 regulatory subunit 1B' # # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.seq_align_beg _struct_ref_seq.seq_align_end _struct_ref_seq.db_align_beg _struct_ref_seq.db_align_end 1 1 1 168 1 168 # # loop_ _ma_target_ref_db_details.target_entity_id _ma_target_ref_db_details.db_name _ma_target_ref_db_details.db_name_other_details _ma_target_ref_db_details.db_code _ma_target_ref_db_details.db_accession _ma_target_ref_db_details.seq_db_isoform _ma_target_ref_db_details.seq_db_align_begin _ma_target_ref_db_details.seq_db_align_end _ma_target_ref_db_details.ncbi_taxonomy_id _ma_target_ref_db_details.organism_scientific _ma_target_ref_db_details.seq_db_sequence_version_date _ma_target_ref_db_details.seq_db_sequence_checksum 1 UNP . PPR1B_HUMAN Q9UD71 Q9UD71-2 1 168 9606 'Homo sapiens (Human)' 2002-10-10 F139B0673543BFE2 # # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_strand_id _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can 1 polypeptide(L) no no P ;MLFRLSEHSSPEEEASPHQRASGEGHHLKSKRPNPCAYTPPSLKAVQRIAESHLQSISNLNENQASEEED ELGELRELGYPREEDEEEEEDDEEEEEEEDSQAEVLKVIRQSAGQKTTCGQGLEGPWERPPPLDESERDG GSEDQVEDPALSEPGEEPQRPSPSEPGT ; ;MLFRLSEHSSPEEEASPHQRASGEGHHLKSKRPNPCAYTPPSLKAVQRIAESHLQSISNLNENQASEEED ELGELRELGYPREEDEEEEEDDEEEEEEEDSQAEVLKVIRQSAGQKTTCGQGLEGPWERPPPLDESERDG GSEDQVEDPALSEPGEEPQRPSPSEPGT ; # # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET . 1 2 LEU . 1 3 PHE . 1 4 ARG . 1 5 LEU . 1 6 SER . 1 7 GLU . 1 8 HIS . 1 9 SER . 1 10 SER . 1 11 PRO . 1 12 GLU . 1 13 GLU . 1 14 GLU . 1 15 ALA . 1 16 SER . 1 17 PRO . 1 18 HIS . 1 19 GLN . 1 20 ARG . 1 21 ALA . 1 22 SER . 1 23 GLY . 1 24 GLU . 1 25 GLY . 1 26 HIS . 1 27 HIS . 1 28 LEU . 1 29 LYS . 1 30 SER . 1 31 LYS . 1 32 ARG . 1 33 PRO . 1 34 ASN . 1 35 PRO . 1 36 CYS . 1 37 ALA . 1 38 TYR . 1 39 THR . 1 40 PRO . 1 41 PRO . 1 42 SER . 1 43 LEU . 1 44 LYS . 1 45 ALA . 1 46 VAL . 1 47 GLN . 1 48 ARG . 1 49 ILE . 1 50 ALA . 1 51 GLU . 1 52 SER . 1 53 HIS . 1 54 LEU . 1 55 GLN . 1 56 SER . 1 57 ILE . 1 58 SER . 1 59 ASN . 1 60 LEU . 1 61 ASN . 1 62 GLU . 1 63 ASN . 1 64 GLN . 1 65 ALA . 1 66 SER . 1 67 GLU . 1 68 GLU . 1 69 GLU . 1 70 ASP . 1 71 GLU . 1 72 LEU . 1 73 GLY . 1 74 GLU . 1 75 LEU . 1 76 ARG . 1 77 GLU . 1 78 LEU . 1 79 GLY . 1 80 TYR . 1 81 PRO . 1 82 ARG . 1 83 GLU . 1 84 GLU . 1 85 ASP . 1 86 GLU . 1 87 GLU . 1 88 GLU . 1 89 GLU . 1 90 GLU . 1 91 ASP . 1 92 ASP . 1 93 GLU . 1 94 GLU . 1 95 GLU . 1 96 GLU . 1 97 GLU . 1 98 GLU . 1 99 GLU . 1 100 ASP . 1 101 SER . 1 102 GLN . 1 103 ALA . 1 104 GLU . 1 105 VAL . 1 106 LEU . 1 107 LYS . 1 108 VAL . 1 109 ILE . 1 110 ARG . 1 111 GLN . 1 112 SER . 1 113 ALA . 1 114 GLY . 1 115 GLN . 1 116 LYS . 1 117 THR . 1 118 THR . 1 119 CYS . 1 120 GLY . 1 121 GLN . 1 122 GLY . 1 123 LEU . 1 124 GLU . 1 125 GLY . 1 126 PRO . 1 127 TRP . 1 128 GLU . 1 129 ARG . 1 130 PRO . 1 131 PRO . 1 132 PRO . 1 133 LEU . 1 134 ASP . 1 135 GLU . 1 136 SER . 1 137 GLU . 1 138 ARG . 1 139 ASP . 1 140 GLY . 1 141 GLY . 1 142 SER . 1 143 GLU . 1 144 ASP . 1 145 GLN . 1 146 VAL . 1 147 GLU . 1 148 ASP . 1 149 PRO . 1 150 ALA . 1 151 LEU . 1 152 SER . 1 153 GLU . 1 154 PRO . 1 155 GLY . 1 156 GLU . 1 157 GLU . 1 158 PRO . 1 159 GLN . 1 160 ARG . 1 161 PRO . 1 162 SER . 1 163 PRO . 1 164 SER . 1 165 GLU . 1 166 PRO . 1 167 GLY . 1 168 THR . # # loop_ _struct_asym.id _struct_asym.entity_id _struct_asym.details A 1 . # # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code A 1 1 MET 1 ? ? ? P . A 1 2 LEU 2 ? ? ? P . A 1 3 PHE 3 ? ? ? P . A 1 4 ARG 4 ? ? ? P . A 1 5 LEU 5 ? ? ? P . A 1 6 SER 6 ? ? ? P . A 1 7 GLU 7 ? ? ? P . A 1 8 HIS 8 ? ? ? P . A 1 9 SER 9 ? ? ? P . A 1 10 SER 10 ? ? ? P . A 1 11 PRO 11 ? ? ? P . A 1 12 GLU 12 ? ? ? P . A 1 13 GLU 13 ? ? ? P . A 1 14 GLU 14 ? ? ? P . A 1 15 ALA 15 ? ? ? P . A 1 16 SER 16 ? ? ? P . A 1 17 PRO 17 ? ? ? P . A 1 18 HIS 18 ? ? ? P . A 1 19 GLN 19 ? ? ? P . A 1 20 ARG 20 ? ? ? P . A 1 21 ALA 21 ? ? ? P . A 1 22 SER 22 ? ? ? P . A 1 23 GLY 23 ? ? ? P . A 1 24 GLU 24 ? ? ? P . A 1 25 GLY 25 ? ? ? P . A 1 26 HIS 26 ? ? ? P . A 1 27 HIS 27 ? ? ? P . A 1 28 LEU 28 ? ? ? P . A 1 29 LYS 29 ? ? ? P . A 1 30 SER 30 ? ? ? P . A 1 31 LYS 31 ? ? ? P . A 1 32 ARG 32 ? ? ? P . A 1 33 PRO 33 ? ? ? P . A 1 34 ASN 34 ? ? ? P . A 1 35 PRO 35 ? ? ? P . A 1 36 CYS 36 ? ? ? P . A 1 37 ALA 37 ? ? ? P . A 1 38 TYR 38 ? ? ? P . A 1 39 THR 39 ? ? ? P . A 1 40 PRO 40 ? ? ? P . A 1 41 PRO 41 ? ? ? P . A 1 42 SER 42 ? ? ? P . A 1 43 LEU 43 ? ? ? P . A 1 44 LYS 44 ? ? ? P . A 1 45 ALA 45 ? ? ? P . A 1 46 VAL 46 ? ? ? P . A 1 47 GLN 47 ? ? ? P . A 1 48 ARG 48 ? ? ? P . A 1 49 ILE 49 ? ? ? P . A 1 50 ALA 50 ? ? ? P . A 1 51 GLU 51 ? ? ? P . A 1 52 SER 52 ? ? ? P . A 1 53 HIS 53 ? ? ? P . A 1 54 LEU 54 ? ? ? P . A 1 55 GLN 55 ? ? ? P . A 1 56 SER 56 ? ? ? P . A 1 57 ILE 57 ? ? ? P . A 1 58 SER 58 ? ? ? P . A 1 59 ASN 59 ? ? ? P . A 1 60 LEU 60 ? ? ? P . A 1 61 ASN 61 ? ? ? P . A 1 62 GLU 62 ? ? ? P . A 1 63 ASN 63 ? ? ? P . A 1 64 GLN 64 ? ? ? P . A 1 65 ALA 65 ? ? ? P . A 1 66 SER 66 ? ? ? P . A 1 67 GLU 67 ? ? ? P . A 1 68 GLU 68 ? ? ? P . A 1 69 GLU 69 ? ? ? P . A 1 70 ASP 70 ? ? ? P . A 1 71 GLU 71 ? ? ? P . A 1 72 LEU 72 ? ? ? P . A 1 73 GLY 73 ? ? ? P . A 1 74 GLU 74 ? ? ? P . A 1 75 LEU 75 ? ? ? P . A 1 76 ARG 76 ? ? ? P . A 1 77 GLU 77 ? ? ? P . A 1 78 LEU 78 ? ? ? P . A 1 79 GLY 79 ? ? ? P . A 1 80 TYR 80 ? ? ? P . A 1 81 PRO 81 ? ? ? P . A 1 82 ARG 82 ? ? ? P . A 1 83 GLU 83 ? ? ? P . A 1 84 GLU 84 ? ? ? P . A 1 85 ASP 85 ? ? ? P . A 1 86 GLU 86 ? ? ? P . A 1 87 GLU 87 ? ? ? P . A 1 88 GLU 88 ? ? ? P . A 1 89 GLU 89 ? ? ? P . A 1 90 GLU 90 ? ? ? P . A 1 91 ASP 91 ? ? ? P . A 1 92 ASP 92 ? ? ? P . A 1 93 GLU 93 ? ? ? P . A 1 94 GLU 94 ? ? ? P . A 1 95 GLU 95 ? ? ? P . A 1 96 GLU 96 ? ? ? P . A 1 97 GLU 97 ? ? ? P . A 1 98 GLU 98 ? ? ? P . A 1 99 GLU 99 ? ? ? P . A 1 100 ASP 100 ? ? ? P . A 1 101 SER 101 ? ? ? P . A 1 102 GLN 102 ? ? ? P . A 1 103 ALA 103 ? ? ? P . A 1 104 GLU 104 ? ? ? P . A 1 105 VAL 105 105 VAL VAL P . A 1 106 LEU 106 106 LEU LEU P . A 1 107 LYS 107 107 LYS LYS P . A 1 108 VAL 108 108 VAL VAL P . A 1 109 ILE 109 109 ILE ILE P . A 1 110 ARG 110 110 ARG ARG P . A 1 111 GLN 111 111 GLN GLN P . A 1 112 SER 112 112 SER SER P . A 1 113 ALA 113 113 ALA ALA P . A 1 114 GLY 114 114 GLY GLY P . A 1 115 GLN 115 115 GLN GLN P . A 1 116 LYS 116 116 LYS LYS P . A 1 117 THR 117 117 THR THR P . A 1 118 THR 118 118 THR THR P . A 1 119 CYS 119 119 CYS CYS P . A 1 120 GLY 120 120 GLY GLY P . A 1 121 GLN 121 121 GLN GLN P . A 1 122 GLY 122 ? ? ? P . A 1 123 LEU 123 ? ? ? P . A 1 124 GLU 124 ? ? ? P . A 1 125 GLY 125 ? ? ? P . A 1 126 PRO 126 ? ? ? P . A 1 127 TRP 127 ? ? ? P . A 1 128 GLU 128 ? ? ? P . A 1 129 ARG 129 ? ? ? P . A 1 130 PRO 130 ? ? ? P . A 1 131 PRO 131 ? ? ? P . A 1 132 PRO 132 ? ? ? P . A 1 133 LEU 133 ? ? ? P . A 1 134 ASP 134 ? ? ? P . A 1 135 GLU 135 ? ? ? P . A 1 136 SER 136 ? ? ? P . A 1 137 GLU 137 ? ? ? P . A 1 138 ARG 138 ? ? ? P . A 1 139 ASP 139 ? ? ? P . A 1 140 GLY 140 ? ? ? P . A 1 141 GLY 141 ? ? ? P . A 1 142 SER 142 ? ? ? P . A 1 143 GLU 143 ? ? ? P . A 1 144 ASP 144 ? ? ? P . A 1 145 GLN 145 ? ? ? P . A 1 146 VAL 146 ? ? ? P . A 1 147 GLU 147 ? ? ? P . A 1 148 ASP 148 ? ? ? P . A 1 149 PRO 149 ? ? ? P . A 1 150 ALA 150 ? ? ? P . A 1 151 LEU 151 ? ? ? P . A 1 152 SER 152 ? ? ? P . A 1 153 GLU 153 ? ? ? P . A 1 154 PRO 154 ? ? ? P . A 1 155 GLY 155 ? ? ? P . A 1 156 GLU 156 ? ? ? P . A 1 157 GLU 157 ? ? ? P . A 1 158 PRO 158 ? ? ? P . A 1 159 GLN 159 ? ? ? P . A 1 160 ARG 160 ? ? ? P . A 1 161 PRO 161 ? ? ? P . A 1 162 SER 162 ? ? ? P . A 1 163 PRO 163 ? ? ? P . A 1 164 SER 164 ? ? ? P . A 1 165 GLU 165 ? ? ? P . A 1 166 PRO 166 ? ? ? P . A 1 167 GLY 167 ? ? ? P . A 1 168 THR 168 ? ? ? P . # # loop_ _ma_data.id _ma_data.name _ma_data.content_type _ma_data.content_type_other_details 1 'Cytochrome b-c1 complex subunit 6 {PDB ID=8q1b, label_asym_id=P, auth_asym_id=Q, SMTL ID=8q1b.1.P}' 'template structure' . 2 . target . 3 'Target-template alignment by HHblits to 8q1b, label_asym_id=P' 'target-template alignment' . 4 'model 1' 'model coordinates' . 5 SMTL 'reference database' . 6 PDB 'reference database' . 7 'Template search output' other 'Results of the sequence search' # # loop_ _ma_data_group.ordinal_id _ma_data_group.group_id _ma_data_group.data_id 1 1 2 2 1 5 3 1 6 4 2 7 5 3 2 6 3 1 7 3 3 8 4 1 9 4 3 10 5 4 # # loop_ _ma_data_ref_db.data_id _ma_data_ref_db.name _ma_data_ref_db.location_url _ma_data_ref_db.version _ma_data_ref_db.release_date 5 SMTL https://swissmodel.expasy.org/templates/ . 2025-01-22 6 PDB https://www.wwpdb.org . 2025-01-17 # # loop_ _ma_target_entity.entity_id _ma_target_entity.data_id _ma_target_entity.origin 1 2 'reference database' # # loop_ _ma_target_entity_instance.asym_id _ma_target_entity_instance.entity_id _ma_target_entity_instance.details A 1 . # # loop_ _ma_template_trans_matrix.id _ma_template_trans_matrix.rot_matrix[1][1] _ma_template_trans_matrix.rot_matrix[2][1] _ma_template_trans_matrix.rot_matrix[3][1] _ma_template_trans_matrix.rot_matrix[1][2] _ma_template_trans_matrix.rot_matrix[2][2] _ma_template_trans_matrix.rot_matrix[3][2] _ma_template_trans_matrix.rot_matrix[1][3] _ma_template_trans_matrix.rot_matrix[2][3] _ma_template_trans_matrix.rot_matrix[3][3] _ma_template_trans_matrix.tr_vector[1] _ma_template_trans_matrix.tr_vector[2] _ma_template_trans_matrix.tr_vector[3] 1 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0 0 0 # # loop_ _ma_template_details.ordinal_id _ma_template_details.template_id _ma_template_details.template_origin _ma_template_details.template_entity_type _ma_template_details.template_trans_matrix_id _ma_template_details.template_data_id _ma_template_details.target_asym_id _ma_template_details.template_label_asym_id _ma_template_details.template_label_entity_id _ma_template_details.template_model_num _ma_template_details.template_auth_asym_id 1 1 'reference database' polymer 1 1 A P 6 1 Q # # loop_ _ma_template_poly.template_id _ma_template_poly.seq_one_letter_code _ma_template_poly.seq_one_letter_code_can 1 ;MSFWKNLFTSAFTPISAEADELIKEDRKQFEENTPSKKNFETQSPDEPSPKTTDSTGARDANLSLKTQEP IVSADDAKGAQGKGADEKEEKKETIQPPEEVKTEPPQPEEKEGKEAKEPEEPPKEEAEEPQEGGEEEEEE EEEEEITDPLEKMTQECMDAPDCKEVKHHFEECTARVTKKVEQGDKSEDCIEEFFHLYHCARDCADPKVF KVLV ; ;MSFWKNLFTSAFTPISAEADELIKEDRKQFEENTPSKKNFETQSPDEPSPKTTDSTGARDANLSLKTQEP IVSADDAKGAQGKGADEKEEKKETIQPPEEVKTEPPQPEEKEGKEAKEPEEPPKEEAEEPQEGGEEEEEE EEEEEITDPLEKMTQECMDAPDCKEVKHHFEECTARVTKKVEQGDKSEDCIEEFFHLYHCARDCADPKVF KVLV ; # # loop_ _ma_template_poly_segment.id _ma_template_poly_segment.template_id _ma_template_poly_segment.residue_number_begin _ma_template_poly_segment.residue_number_end 1 1 136 165 # # loop_ _ma_template_ref_db_details.template_id _ma_template_ref_db_details.db_name _ma_template_ref_db_details.db_name_other_details _ma_template_ref_db_details.db_accession_code _ma_template_ref_db_details.db_version_date 1 PDB . 8q1b 2023-11-15 # # loop_ _ma_target_template_poly_mapping.id _ma_target_template_poly_mapping.template_segment_id _ma_target_template_poly_mapping.target_asym_id _ma_target_template_poly_mapping.target_seq_id_begin _ma_target_template_poly_mapping.target_seq_id_end 1 1 A 1 168 # # loop_ _ma_alignment_info.alignment_id _ma_alignment_info.data_id _ma_alignment_info.software_group_id _ma_alignment_info.alignment_length _ma_alignment_info.alignment_type _ma_alignment_info.alignment_mode 1 3 1 168 'target-template pairwise alignment' local # # loop_ _ma_alignment_details.ordinal_id _ma_alignment_details.alignment_id _ma_alignment_details.template_segment_id _ma_alignment_details.target_asym_id _ma_alignment_details.score_type _ma_alignment_details.score_type_other_details _ma_alignment_details.score_value _ma_alignment_details.percent_sequence_identity _ma_alignment_details.sequence_identity_denominator _ma_alignment_details.sequence_identity_denominator_other_details 1 1 1 A 'HHblits e-value' . 9.500 33.333 'Number of aligned residue pairs (not including the gaps)' . # # loop_ _ma_alignment.ordinal_id _ma_alignment.alignment_id _ma_alignment.target_template_flag _ma_alignment.sequence 1 1 1 MLFRLSEHSSPEEEASPHQRASGEGHHLKSKRPNPCAYTPPSLKAVQRIAESHLQSISNLNENQASEEEDELGELRELGYPREEDEEEEEDDEEEEEEEDSQAEVLKVIRQSAGQKTTCGQGLEGPWERPPPLDESERDGGSEDQVEDPALSEPGEEPQRPSPSEPGT 2 1 2 -------------------------------------------------------------------------------------------EEEEEEEEEEITDPLEKMTQECMDAPDCKE----------------------------------------------- # # loop_ _ma_protocol_step.ordinal_id _ma_protocol_step.protocol_id _ma_protocol_step.step_id _ma_protocol_step.method_type _ma_protocol_step.step_name _ma_protocol_step.details _ma_protocol_step.software_group_id _ma_protocol_step.input_data_group_id _ma_protocol_step.output_data_group_id 1 1 1 'template search' 'template search' 'SWISS-MODEL template search in PDB' 2 1 2 2 1 2 'template selection' 'template selection' 'Automatic template selection by SWISS-MODEL {QSQE=0.000}' 3 2 4 3 1 3 modeling 'homology modeling' 'SWISS-MODEL auto-model mode using ProMod3 on 8q1b.1' 4 3 5 # # loop_ _ma_model_list.ordinal_id _ma_model_list.model_id _ma_model_list.model_group_id _ma_model_list.model_name _ma_model_list.model_group_name _ma_model_list.data_id _ma_model_list.model_type _ma_model_list.model_type_other_details 1 1 1 'model 1' . 4 'Homology model' . # # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_alt_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.auth_seq_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.label_entity_id _atom_site.auth_asym_id _atom_site.auth_comp_id _atom_site.B_iso_or_equiv _atom_site.pdbx_PDB_model_num ATOM 1 N N . VAL 105 105 ? A 251.125 288.914 243.445 1 1 P VAL 0.340 1 ATOM 2 C CA . VAL 105 105 ? A 251.837 287.905 244.327 1 1 P VAL 0.340 1 ATOM 3 C C . VAL 105 105 ? A 252.453 286.817 243.493 1 1 P VAL 0.340 1 ATOM 4 O O . VAL 105 105 ? A 253.686 286.807 243.321 1 1 P VAL 0.340 1 ATOM 5 C CB . VAL 105 105 ? A 250.916 287.359 245.426 1 1 P VAL 0.340 1 ATOM 6 C CG1 . VAL 105 105 ? A 251.625 286.314 246.327 1 1 P VAL 0.340 1 ATOM 7 C CG2 . VAL 105 105 ? A 250.470 288.549 246.293 1 1 P VAL 0.340 1 ATOM 8 N N . LEU 106 106 ? A 251.656 285.938 242.870 1 1 P LEU 0.370 1 ATOM 9 C CA . LEU 106 106 ? A 252.140 284.783 242.129 1 1 P LEU 0.370 1 ATOM 10 C C . LEU 106 106 ? A 253.109 285.087 240.979 1 1 P LEU 0.370 1 ATOM 11 O O . LEU 106 106 ? A 254.137 284.436 240.837 1 1 P LEU 0.370 1 ATOM 12 C CB . LEU 106 106 ? A 250.909 283.987 241.658 1 1 P LEU 0.370 1 ATOM 13 C CG . LEU 106 106 ? A 251.174 282.535 241.221 1 1 P LEU 0.370 1 ATOM 14 C CD1 . LEU 106 106 ? A 252.104 281.749 242.162 1 1 P LEU 0.370 1 ATOM 15 C CD2 . LEU 106 106 ? A 249.832 281.804 241.096 1 1 P LEU 0.370 1 ATOM 16 N N . LYS 107 107 ? A 252.838 286.136 240.166 1 1 P LYS 0.280 1 ATOM 17 C CA . LYS 107 107 ? A 253.725 286.606 239.104 1 1 P LYS 0.280 1 ATOM 18 C C . LYS 107 107 ? A 255.128 287.012 239.559 1 1 P LYS 0.280 1 ATOM 19 O O . LYS 107 107 ? A 256.116 286.640 238.929 1 1 P LYS 0.280 1 ATOM 20 C CB . LYS 107 107 ? A 253.073 287.810 238.378 1 1 P LYS 0.280 1 ATOM 21 C CG . LYS 107 107 ? A 251.802 287.433 237.597 1 1 P LYS 0.280 1 ATOM 22 C CD . LYS 107 107 ? A 251.175 288.637 236.866 1 1 P LYS 0.280 1 ATOM 23 C CE . LYS 107 107 ? A 249.934 288.274 236.039 1 1 P LYS 0.280 1 ATOM 24 N NZ . LYS 107 107 ? A 249.358 289.481 235.400 1 1 P LYS 0.280 1 ATOM 25 N N . VAL 108 108 ? A 255.244 287.754 240.682 1 1 P VAL 0.310 1 ATOM 26 C CA . VAL 108 108 ? A 256.514 288.164 241.277 1 1 P VAL 0.310 1 ATOM 27 C C . VAL 108 108 ? A 257.336 286.965 241.730 1 1 P VAL 0.310 1 ATOM 28 O O . VAL 108 108 ? A 258.504 286.825 241.374 1 1 P VAL 0.310 1 ATOM 29 C CB . VAL 108 108 ? A 256.286 289.117 242.456 1 1 P VAL 0.310 1 ATOM 30 C CG1 . VAL 108 108 ? A 257.616 289.492 243.146 1 1 P VAL 0.310 1 ATOM 31 C CG2 . VAL 108 108 ? A 255.601 290.403 241.952 1 1 P VAL 0.310 1 ATOM 32 N N . ILE 109 109 ? A 256.722 286.019 242.476 1 1 P ILE 0.430 1 ATOM 33 C CA . ILE 109 109 ? A 257.394 284.808 242.947 1 1 P ILE 0.430 1 ATOM 34 C C . ILE 109 109 ? A 257.846 283.916 241.798 1 1 P ILE 0.430 1 ATOM 35 O O . ILE 109 109 ? A 258.982 283.432 241.784 1 1 P ILE 0.430 1 ATOM 36 C CB . ILE 109 109 ? A 256.531 284.044 243.954 1 1 P ILE 0.430 1 ATOM 37 C CG1 . ILE 109 109 ? A 256.340 284.906 245.227 1 1 P ILE 0.430 1 ATOM 38 C CG2 . ILE 109 109 ? A 257.167 282.678 244.312 1 1 P ILE 0.430 1 ATOM 39 C CD1 . ILE 109 109 ? A 255.283 284.360 246.193 1 1 P ILE 0.430 1 ATOM 40 N N . ARG 110 110 ? A 256.998 283.712 240.772 1 1 P ARG 0.480 1 ATOM 41 C CA . ARG 110 110 ? A 257.348 282.963 239.575 1 1 P ARG 0.480 1 ATOM 42 C C . ARG 110 110 ? A 258.500 283.575 238.782 1 1 P ARG 0.480 1 ATOM 43 O O . ARG 110 110 ? A 259.393 282.861 238.326 1 1 P ARG 0.480 1 ATOM 44 C CB . ARG 110 110 ? A 256.131 282.809 238.638 1 1 P ARG 0.480 1 ATOM 45 C CG . ARG 110 110 ? A 255.039 281.851 239.151 1 1 P ARG 0.480 1 ATOM 46 C CD . ARG 110 110 ? A 253.864 281.800 238.177 1 1 P ARG 0.480 1 ATOM 47 N NE . ARG 110 110 ? A 252.881 280.804 238.706 1 1 P ARG 0.480 1 ATOM 48 C CZ . ARG 110 110 ? A 251.757 280.457 238.063 1 1 P ARG 0.480 1 ATOM 49 N NH1 . ARG 110 110 ? A 251.481 280.938 236.855 1 1 P ARG 0.480 1 ATOM 50 N NH2 . ARG 110 110 ? A 250.884 279.634 238.635 1 1 P ARG 0.480 1 ATOM 51 N N . GLN 111 111 ? A 258.523 284.915 238.620 1 1 P GLN 0.650 1 ATOM 52 C CA . GLN 111 111 ? A 259.639 285.634 238.021 1 1 P GLN 0.650 1 ATOM 53 C C . GLN 111 111 ? A 260.932 285.488 238.823 1 1 P GLN 0.650 1 ATOM 54 O O . GLN 111 111 ? A 261.997 285.194 238.280 1 1 P GLN 0.650 1 ATOM 55 C CB . GLN 111 111 ? A 259.300 287.141 237.857 1 1 P GLN 0.650 1 ATOM 56 C CG . GLN 111 111 ? A 260.413 287.988 237.192 1 1 P GLN 0.650 1 ATOM 57 C CD . GLN 111 111 ? A 260.769 287.423 235.818 1 1 P GLN 0.650 1 ATOM 58 O OE1 . GLN 111 111 ? A 259.915 286.964 235.064 1 1 P GLN 0.650 1 ATOM 59 N NE2 . GLN 111 111 ? A 262.078 287.437 235.475 1 1 P GLN 0.650 1 ATOM 60 N N . SER 112 112 ? A 260.851 285.633 240.162 1 1 P SER 0.660 1 ATOM 61 C CA . SER 112 112 ? A 261.967 285.398 241.083 1 1 P SER 0.660 1 ATOM 62 C C . SER 112 112 ? A 262.500 283.979 241.066 1 1 P SER 0.660 1 ATOM 63 O O . SER 112 112 ? A 263.717 283.773 241.144 1 1 P SER 0.660 1 ATOM 64 C CB . SER 112 112 ? A 261.629 285.724 242.558 1 1 P SER 0.660 1 ATOM 65 O OG . SER 112 112 ? A 261.385 287.121 242.730 1 1 P SER 0.660 1 ATOM 66 N N . ALA 113 113 ? A 261.635 282.956 240.968 1 1 P ALA 0.730 1 ATOM 67 C CA . ALA 113 113 ? A 261.982 281.568 240.712 1 1 P ALA 0.730 1 ATOM 68 C C . ALA 113 113 ? A 262.615 281.332 239.333 1 1 P ALA 0.730 1 ATOM 69 O O . ALA 113 113 ? A 263.521 280.515 239.192 1 1 P ALA 0.730 1 ATOM 70 C CB . ALA 113 113 ? A 260.770 280.634 240.926 1 1 P ALA 0.730 1 ATOM 71 N N . GLY 114 114 ? A 262.157 282.053 238.287 1 1 P GLY 0.660 1 ATOM 72 C CA . GLY 114 114 ? A 262.736 282.029 236.934 1 1 P GLY 0.660 1 ATOM 73 C C . GLY 114 114 ? A 264.110 282.640 236.782 1 1 P GLY 0.660 1 ATOM 74 O O . GLY 114 114 ? A 264.876 282.251 235.881 1 1 P GLY 0.660 1 ATOM 75 N N . GLN 115 115 ? A 264.480 283.610 237.622 1 1 P GLN 0.700 1 ATOM 76 C CA . GLN 115 115 ? A 265.824 284.166 237.697 1 1 P GLN 0.700 1 ATOM 77 C C . GLN 115 115 ? A 266.622 283.564 238.832 1 1 P GLN 0.700 1 ATOM 78 O O . GLN 115 115 ? A 267.783 283.911 239.060 1 1 P GLN 0.700 1 ATOM 79 C CB . GLN 115 115 ? A 265.781 285.686 237.942 1 1 P GLN 0.700 1 ATOM 80 C CG . GLN 115 115 ? A 265.216 286.449 236.734 1 1 P GLN 0.700 1 ATOM 81 C CD . GLN 115 115 ? A 265.179 287.952 236.983 1 1 P GLN 0.700 1 ATOM 82 O OE1 . GLN 115 115 ? A 264.109 288.539 237.125 1 1 P GLN 0.700 1 ATOM 83 N NE2 . GLN 115 115 ? A 266.365 288.605 237.009 1 1 P GLN 0.700 1 ATOM 84 N N . LYS 116 116 ? A 266.012 282.640 239.586 1 1 P LYS 0.690 1 ATOM 85 C CA . LYS 116 116 ? A 266.683 281.843 240.584 1 1 P LYS 0.690 1 ATOM 86 C C . LYS 116 116 ? A 267.598 280.797 239.965 1 1 P LYS 0.690 1 ATOM 87 O O . LYS 116 116 ? A 267.326 280.207 238.924 1 1 P LYS 0.690 1 ATOM 88 C CB . LYS 116 116 ? A 265.686 281.164 241.565 1 1 P LYS 0.690 1 ATOM 89 C CG . LYS 116 116 ? A 266.331 280.532 242.811 1 1 P LYS 0.690 1 ATOM 90 C CD . LYS 116 116 ? A 265.338 279.838 243.760 1 1 P LYS 0.690 1 ATOM 91 C CE . LYS 116 116 ? A 265.982 279.257 245.030 1 1 P LYS 0.690 1 ATOM 92 N NZ . LYS 116 116 ? A 267.202 278.490 244.686 1 1 P LYS 0.690 1 ATOM 93 N N . THR 117 117 ? A 268.694 280.487 240.677 1 1 P THR 0.610 1 ATOM 94 C CA . THR 117 117 ? A 269.733 279.516 240.336 1 1 P THR 0.610 1 ATOM 95 C C . THR 117 117 ? A 269.259 278.085 240.154 1 1 P THR 0.610 1 ATOM 96 O O . THR 117 117 ? A 269.971 277.263 239.574 1 1 P THR 0.610 1 ATOM 97 C CB . THR 117 117 ? A 270.804 279.465 241.420 1 1 P THR 0.610 1 ATOM 98 O OG1 . THR 117 117 ? A 270.275 279.213 242.728 1 1 P THR 0.610 1 ATOM 99 C CG2 . THR 117 117 ? A 271.502 280.828 241.483 1 1 P THR 0.610 1 ATOM 100 N N . THR 118 118 ? A 268.054 277.766 240.669 1 1 P THR 0.560 1 ATOM 101 C CA . THR 118 118 ? A 267.365 276.473 240.562 1 1 P THR 0.560 1 ATOM 102 C C . THR 118 118 ? A 267.036 276.130 239.129 1 1 P THR 0.560 1 ATOM 103 O O . THR 118 118 ? A 267.221 274.985 238.708 1 1 P THR 0.560 1 ATOM 104 C CB . THR 118 118 ? A 266.036 276.396 241.328 1 1 P THR 0.560 1 ATOM 105 O OG1 . THR 118 118 ? A 266.139 276.640 242.741 1 1 P THR 0.560 1 ATOM 106 C CG2 . THR 118 118 ? A 265.434 274.979 241.315 1 1 P THR 0.560 1 ATOM 107 N N . CYS 119 119 ? A 266.549 277.097 238.327 1 1 P CYS 0.520 1 ATOM 108 C CA . CYS 119 119 ? A 266.168 276.842 236.948 1 1 P CYS 0.520 1 ATOM 109 C C . CYS 119 119 ? A 266.966 277.791 236.066 1 1 P CYS 0.520 1 ATOM 110 O O . CYS 119 119 ? A 266.528 278.905 235.786 1 1 P CYS 0.520 1 ATOM 111 C CB . CYS 119 119 ? A 264.642 277.051 236.696 1 1 P CYS 0.520 1 ATOM 112 S SG . CYS 119 119 ? A 263.538 276.115 237.812 1 1 P CYS 0.520 1 ATOM 113 N N . GLY 120 120 ? A 268.193 277.376 235.663 1 1 P GLY 0.300 1 ATOM 114 C CA . GLY 120 120 ? A 269.086 278.183 234.815 1 1 P GLY 0.300 1 ATOM 115 C C . GLY 120 120 ? A 269.464 277.605 233.465 1 1 P GLY 0.300 1 ATOM 116 O O . GLY 120 120 ? A 269.926 278.347 232.590 1 1 P GLY 0.300 1 ATOM 117 N N . GLN 121 121 ? A 269.348 276.279 233.292 1 1 P GLN 0.340 1 ATOM 118 C CA . GLN 121 121 ? A 269.624 275.558 232.057 1 1 P GLN 0.340 1 ATOM 119 C C . GLN 121 121 ? A 268.414 275.547 231.077 1 1 P GLN 0.340 1 ATOM 120 O O . GLN 121 121 ? A 267.292 275.940 231.482 1 1 P GLN 0.340 1 ATOM 121 C CB . GLN 121 121 ? A 269.951 274.069 232.367 1 1 P GLN 0.340 1 ATOM 122 C CG . GLN 121 121 ? A 271.275 273.840 233.133 1 1 P GLN 0.340 1 ATOM 123 C CD . GLN 121 121 ? A 271.517 272.355 233.439 1 1 P GLN 0.340 1 ATOM 124 O OE1 . GLN 121 121 ? A 270.612 271.554 233.630 1 1 P GLN 0.340 1 ATOM 125 N NE2 . GLN 121 121 ? A 272.817 271.966 233.529 1 1 P GLN 0.340 1 ATOM 126 O OXT . GLN 121 121 ? A 268.623 275.091 229.915 1 1 P GLN 0.340 1 # # loop_ _atom_type.symbol C N O S # # loop_ _ma_qa_metric.id _ma_qa_metric.name _ma_qa_metric.description _ma_qa_metric.type _ma_qa_metric.mode _ma_qa_metric.type_other_details _ma_qa_metric.software_group_id 1 QMEANDisCo 'Predicted accuracy according to all-atom lDDT in [0,1].' 'pLDDT all-atom in [0,1]' local . 5 2 QMEANDisCo 'Predicted accuracy according to all-atom lDDT in [0,1].' 'pLDDT all-atom in [0,1]' global . 5 3 GMQE 'Global Model Quality Estimate of the model accuracy, calculated by SWISS-MODEL.' 'normalized score' global . 6 # # loop_ _ma_qa_metric_global.ordinal_id _ma_qa_metric_global.model_id _ma_qa_metric_global.metric_id _ma_qa_metric_global.metric_value 1 1 2 0.508 2 1 3 0.030 # # loop_ _ma_qa_metric_local.ordinal_id _ma_qa_metric_local.model_id _ma_qa_metric_local.label_asym_id _ma_qa_metric_local.label_seq_id _ma_qa_metric_local.label_comp_id _ma_qa_metric_local.metric_id _ma_qa_metric_local.metric_value 1 1 A 105 VAL 1 0.340 2 1 A 106 LEU 1 0.370 3 1 A 107 LYS 1 0.280 4 1 A 108 VAL 1 0.310 5 1 A 109 ILE 1 0.430 6 1 A 110 ARG 1 0.480 7 1 A 111 GLN 1 0.650 8 1 A 112 SER 1 0.660 9 1 A 113 ALA 1 0.730 10 1 A 114 GLY 1 0.660 11 1 A 115 GLN 1 0.700 12 1 A 116 LYS 1 0.690 13 1 A 117 THR 1 0.610 14 1 A 118 THR 1 0.560 15 1 A 119 CYS 1 0.520 16 1 A 120 GLY 1 0.300 17 1 A 121 GLN 1 0.340 # # loop_ _pdbx_data_usage.id _pdbx_data_usage.type _pdbx_data_usage.details _pdbx_data_usage.url 1 license ;This SWISS-MODEL protein model is copyright. 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