data_SMR-56a1302b3afc06213f1bd619447509cc_1
_entry.id SMR-56a1302b3afc06213f1bd619447509cc_1
_struct.entry_id SMR-56a1302b3afc06213f1bd619447509cc_1
_struct.pdbx_model_details
;This model was generated unsupervised by the SWISS-MODEL homology-modelling pipeline for the SWISS-MODEL Repository, a database of annotated 3D protein structure models. The modelled monomer covers following UniProtKB entries:

  - P11836 (isoform 2)/ CD20_HUMAN, B-lymphocyte antigen CD20

Estimated model accuracy of this model is 0.198, calculated by SWISS-MODEL as Global Model Quality Estimate (GMQE).
;
_struct.pdbx_structure_determination_methodology computational
_struct.title 'Model for UniProtKB entries P11836 (isoform 2)'
_audit_conform.dict_location https://raw.githubusercontent.com/ihmwg/ModelCIF/d18ba38/base/mmcif_ma-core.dic
_audit_conform.dict_name mmcif_ma.dic
_audit_conform.dict_version 1.4.6
#
loop_
_citation.id
_citation.title
_citation.journal_abbrev
_citation.journal_volume
_citation.page_first
_citation.page_last
_citation.year
_citation.pdbx_database_id_PubMed
_citation.pdbx_database_id_DOI
primary 'The SWISS-MODEL Repository - new features and functionality'
'Nucleic Acids Res.' 45 D313 D319 2017 27899672 10.1093/nar/gkw1132
2 'SWISS-MODEL: homology modelling of protein structures and complexes'
'Nucleic Acids Res.' 46 W296 W303 2018 29788355 10.1093/nar/gky427
3 'ProMod3 - A versatile homology modelling toolbox' 'PLoS Comput. Biol.' 17(1)
1 18 2021 33507980 10.1371/journal.pcbi.1008667
4 'QMEANDisCo - distance constraints applied on model quality estimation'
Bioinformatics 36 1765 1771 2020 31697312 10.1093/bioinformatics/btz828
5
'OpenStructure: an integrated software framework for computational structural biology'
'Acta Crystallogr., Sect. D: Biol. Crystallogr.' 69 701 709 2013 23633579
10.1107/S0907444913007051
6 'BLAST+: architecture and applications' 'BMC Bioinf.' 10 421 . 2009 20003500
10.1186/1471-2105-10-421
7 'HH-suite3 for fast remote homology detection and deep protein annotation'
'BMC Bioinf.' 20 473 . 2019 31521110 10.1186/s12859-019-3019-7
#
#
loop_
_citation_author.citation_id
_citation_author.name
_citation_author.ordinal
primary 'Bienert, S.' 1
primary 'Waterhouse, A.' 2
primary 'de Beer, T.A.P.' 3
primary 'Tauriello, G.' 4
primary 'Studer, G.' 5
primary 'Bordoli, L.' 6
primary 'Schwede, T.' 7
2 'Waterhouse, A.' 8
2 'Bertoni, M.' 9
2 'Bienert, S.' 10
2 'Studer, G.' 11
2 'Tauriello, G.' 12
2 'Gumienny, R.' 13
2 'Heer, F.T.' 14
2 'de Beer, T.A.P.' 15
2 'Rempfer, C.' 16
2 'Bordoli, L.' 17
2 'Lepore, R.' 18
2 'Schwede, T.' 19
3 'Studer, G.' 20
3 'Tauriello, G.' 21
3 'Bienert, S.' 22
3 'Biasini, M.' 23
3 'Johner, N.' 24
3 'Schwede, T.' 25
4 'Studer, G.' 26
4 'Rempfer, C.' 27
4 'Waterhouse, A.M.' 28
4 'Gumienny, R.' 29
4 'Haas, J.' 30
4 'Schwede, T.' 31
5 'Biasini, M.' 32
5 'Schmidt, T.' 33
5 'Bienert, S.' 34
5 'Mariani, V.' 35
5 'Studer, G.' 36
5 'Haas, J.' 37
5 'Johner, N.' 38
5 'Schenk, A.D.' 39
5 'Philippsen, A.' 40
5 'Schwede, T.' 41
6 'Camacho, C.' 42
6 'Coulouris, G.' 43
6 'Avagyan, V.' 44
6 'Ma, N.' 45
6 'Papadopoulos, J.' 46
6 'Bealer, K.' 47
6 'Madden, T.L.' 48
7 'Steinegger, M.' 49
7 'Meier, M.' 50
7 'Mirdita, M.' 51
7 'Vohringer, H.' 52
7 'Haunsberger, S.J.' 53
7 'Soding, J.' 54
#
#
loop_
_software.pdbx_ordinal
_software.name
_software.classification
_software.description
_software.version
_software.type
_software.location
_software.citation_id
1 SWISS-MODEL 'model building' 'Homology modelling web service'
3ef406dae3f6eb8b74980f2a6e69a2109acde4aa package https://swissmodel.expasy.org 2
2 ProMod3 'model building' 'Modular homology modelling engine' 3.4.1 library
https://git.scicore.unibas.ch/schwede/ProMod3 3
3 QMEAN 'model building' 'QMEAN - Qualitative Model Energy ANalysis' 4.3.1
library https://git.scicore.unibas.ch/schwede/QMEAN 4
4 OpenStructure 'data processing'
'Open-Source Computational Structural Biology Framework' 2.8.0 package
https://openstructure.org/ 5
5 BLAST 'data collection' . 2.2.31 package https://blast.ncbi.nlm.nih.gov 6
6 HH-suite 'data collection' 'HH-suite3 for sensitive sequence searching' 3.2.0
package https://github.com/soedinglab/hh-suite 7
#
#
loop_
_ma_software_group.ordinal_id
_ma_software_group.group_id
_ma_software_group.software_id
_ma_software_group.parameter_group_id
1 1 5 .
2 2 1 .
3 2 4 .
4 2 5 .
5 2 6 .
6 3 1 .
7 3 4 .
8 4 1 .
9 4 2 .
10 4 4 .
11 5 3 .
12 6 1 .
13 6 3 .
14 6 4 .
#
#
loop_
_audit_author.name
_audit_author.pdbx_ordinal
'Bienert, S.' 1
'Waterhouse, A.' 2
'de Beer, T.A.P.' 3
'Tauriello, G.' 4
'Studer, G.' 5
'Bordoli, L.' 6
'Schwede, T.' 7
#
#
loop_
_chem_comp.id
_chem_comp.type
_chem_comp.name
_chem_comp.formula
_chem_comp.formula_weight
_chem_comp.ma_provenance
ALA 'L-peptide linking' ALANINE 'C3 H7 N O2' 89.094 'CCD Core'
ARG 'L-peptide linking' ARGININE 'C6 H15 N4 O2 1' 175.212 'CCD Core'
ASN 'L-peptide linking' ASPARAGINE 'C4 H8 N2 O3' 132.119 'CCD Core'
ASP 'L-peptide linking' 'ASPARTIC ACID' 'C4 H7 N O4' 133.103 'CCD Core'
CYS 'L-peptide linking' CYSTEINE 'C3 H7 N O2 S' 121.154 'CCD Core'
GLN 'L-peptide linking' GLUTAMINE 'C5 H10 N2 O3' 146.146 'CCD Core'
GLU 'L-peptide linking' 'GLUTAMIC ACID' 'C5 H9 N O4' 147.130 'CCD Core'
GLY 'peptide linking' GLYCINE 'C2 H5 N O2' 75.067 'CCD Core'
HIS 'L-peptide linking' HISTIDINE 'C6 H10 N3 O2 1' 156.165 'CCD Core'
ILE 'L-peptide linking' ISOLEUCINE 'C6 H13 N O2' 131.175 'CCD Core'
LEU 'L-peptide linking' LEUCINE 'C6 H13 N O2' 131.175 'CCD Core'
LYS 'L-peptide linking' LYSINE 'C6 H15 N2 O2 1' 147.198 'CCD Core'
MET 'L-peptide linking' METHIONINE 'C5 H11 N O2 S' 149.208 'CCD Core'
PHE 'L-peptide linking' PHENYLALANINE 'C9 H11 N O2' 165.192 'CCD Core'
PRO 'L-peptide linking' PROLINE 'C5 H9 N O2' 115.132 'CCD Core'
SER 'L-peptide linking' SERINE 'C3 H7 N O3' 105.093 'CCD Core'
THR 'L-peptide linking' THREONINE 'C4 H9 N O3' 119.120 'CCD Core'
TRP 'L-peptide linking' TRYPTOPHAN 'C11 H12 N2 O2' 204.229 'CCD Core'
TYR 'L-peptide linking' TYROSINE 'C9 H11 N O3' 181.191 'CCD Core'
VAL 'L-peptide linking' VALINE 'C5 H11 N O2' 117.148 'CCD Core'
#
#
loop_
_entity.id
_entity.type
_entity.src_method
_entity.pdbx_description
_entity.formula_weight
_entity.pdbx_number_of_molecules
_entity.details
1 polymer man . 16918.284 1 .
#
#
loop_
_struct_ref.id
_struct_ref.entity_id
_struct_ref.db_name
_struct_ref.db_code
_struct_ref.pdbx_db_accession
_struct_ref.pdbx_align_begin
_struct_ref.pdbx_seq_one_letter_code
_struct_ref.details
1 1 UNP CD20_HUMAN P11836 1
;MTTPRNSVNGTFPAEPMKGPIAMQSGPKPLFRRMSSLELVIAGIVENEWKRTCSRPKSNIVLLSAEEKKE
QTIEIKEEVVGLTETSSQPKNEEDIEIIPIQEEEEEETETNFPEPPQDQESSPIENDSSP
;
'B-lymphocyte antigen CD20'
#
#
loop_
_struct_ref_seq.align_id
_struct_ref_seq.ref_id
_struct_ref_seq.seq_align_beg
_struct_ref_seq.seq_align_end
_struct_ref_seq.db_align_beg
_struct_ref_seq.db_align_end
1 1 1 130 1 130
#
#
loop_
_ma_target_ref_db_details.target_entity_id
_ma_target_ref_db_details.db_name
_ma_target_ref_db_details.db_name_other_details
_ma_target_ref_db_details.db_code
_ma_target_ref_db_details.db_accession
_ma_target_ref_db_details.seq_db_isoform
_ma_target_ref_db_details.seq_db_align_begin
_ma_target_ref_db_details.seq_db_align_end
_ma_target_ref_db_details.ncbi_taxonomy_id
_ma_target_ref_db_details.organism_scientific
_ma_target_ref_db_details.seq_db_sequence_version_date
_ma_target_ref_db_details.seq_db_sequence_checksum
1 UNP . CD20_HUMAN P11836 P11836-2 1 130 9606 'Homo sapiens (Human)' 1989-10-01
7B38C8639E2D3744
#
#
loop_
_entity_poly.entity_id
_entity_poly.type
_entity_poly.nstd_linkage
_entity_poly.nstd_monomer
_entity_poly.pdbx_strand_id
_entity_poly.pdbx_seq_one_letter_code
_entity_poly.pdbx_seq_one_letter_code_can
1 polypeptide(L) no no C
;MTTPRNSVNGTFPAEPMKGPIAMQSGPKPLFRRMSSLELVIAGIVENEWKRTCSRPKSNIVLLSAEEKKE
QTIEIKEEVVGLTETSSQPKNEEDIEIIPIQEEEEEETETNFPEPPQDQESSPIENDSSP
;

;MTTPRNSVNGTFPAEPMKGPIAMQSGPKPLFRRMSSLELVIAGIVENEWKRTCSRPKSNIVLLSAEEKKE
QTIEIKEEVVGLTETSSQPKNEEDIEIIPIQEEEEEETETNFPEPPQDQESSPIENDSSP
;

#
#
loop_
_entity_poly_seq.entity_id
_entity_poly_seq.num
_entity_poly_seq.mon_id
_entity_poly_seq.hetero
1 1 MET .
1 2 THR .
1 3 THR .
1 4 PRO .
1 5 ARG .
1 6 ASN .
1 7 SER .
1 8 VAL .
1 9 ASN .
1 10 GLY .
1 11 THR .
1 12 PHE .
1 13 PRO .
1 14 ALA .
1 15 GLU .
1 16 PRO .
1 17 MET .
1 18 LYS .
1 19 GLY .
1 20 PRO .
1 21 ILE .
1 22 ALA .
1 23 MET .
1 24 GLN .
1 25 SER .
1 26 GLY .
1 27 PRO .
1 28 LYS .
1 29 PRO .
1 30 LEU .
1 31 PHE .
1 32 ARG .
1 33 ARG .
1 34 MET .
1 35 SER .
1 36 SER .
1 37 LEU .
1 38 GLU .
1 39 LEU .
1 40 VAL .
1 41 ILE .
1 42 ALA .
1 43 GLY .
1 44 ILE .
1 45 VAL .
1 46 GLU .
1 47 ASN .
1 48 GLU .
1 49 TRP .
1 50 LYS .
1 51 ARG .
1 52 THR .
1 53 CYS .
1 54 SER .
1 55 ARG .
1 56 PRO .
1 57 LYS .
1 58 SER .
1 59 ASN .
1 60 ILE .
1 61 VAL .
1 62 LEU .
1 63 LEU .
1 64 SER .
1 65 ALA .
1 66 GLU .
1 67 GLU .
1 68 LYS .
1 69 LYS .
1 70 GLU .
1 71 GLN .
1 72 THR .
1 73 ILE .
1 74 GLU .
1 75 ILE .
1 76 LYS .
1 77 GLU .
1 78 GLU .
1 79 VAL .
1 80 VAL .
1 81 GLY .
1 82 LEU .
1 83 THR .
1 84 GLU .
1 85 THR .
1 86 SER .
1 87 SER .
1 88 GLN .
1 89 PRO .
1 90 LYS .
1 91 ASN .
1 92 GLU .
1 93 GLU .
1 94 ASP .
1 95 ILE .
1 96 GLU .
1 97 ILE .
1 98 ILE .
1 99 PRO .
1 100 ILE .
1 101 GLN .
1 102 GLU .
1 103 GLU .
1 104 GLU .
1 105 GLU .
1 106 GLU .
1 107 GLU .
1 108 THR .
1 109 GLU .
1 110 THR .
1 111 ASN .
1 112 PHE .
1 113 PRO .
1 114 GLU .
1 115 PRO .
1 116 PRO .
1 117 GLN .
1 118 ASP .
1 119 GLN .
1 120 GLU .
1 121 SER .
1 122 SER .
1 123 PRO .
1 124 ILE .
1 125 GLU .
1 126 ASN .
1 127 ASP .
1 128 SER .
1 129 SER .
1 130 PRO .
#
#
loop_
_struct_asym.id
_struct_asym.entity_id
_struct_asym.details
A 1 .
#
#
loop_
_pdbx_poly_seq_scheme.asym_id
_pdbx_poly_seq_scheme.entity_id
_pdbx_poly_seq_scheme.seq_id
_pdbx_poly_seq_scheme.mon_id
_pdbx_poly_seq_scheme.pdb_seq_num
_pdbx_poly_seq_scheme.auth_seq_num
_pdbx_poly_seq_scheme.pdb_mon_id
_pdbx_poly_seq_scheme.auth_mon_id
_pdbx_poly_seq_scheme.pdb_strand_id
_pdbx_poly_seq_scheme.pdb_ins_code
A 1 1 MET 1 ? ? ? C .
A 1 2 THR 2 ? ? ? C .
A 1 3 THR 3 ? ? ? C .
A 1 4 PRO 4 ? ? ? C .
A 1 5 ARG 5 ? ? ? C .
A 1 6 ASN 6 ? ? ? C .
A 1 7 SER 7 ? ? ? C .
A 1 8 VAL 8 ? ? ? C .
A 1 9 ASN 9 ? ? ? C .
A 1 10 GLY 10 ? ? ? C .
A 1 11 THR 11 ? ? ? C .
A 1 12 PHE 12 ? ? ? C .
A 1 13 PRO 13 ? ? ? C .
A 1 14 ALA 14 ? ? ? C .
A 1 15 GLU 15 ? ? ? C .
A 1 16 PRO 16 ? ? ? C .
A 1 17 MET 17 ? ? ? C .
A 1 18 LYS 18 ? ? ? C .
A 1 19 GLY 19 ? ? ? C .
A 1 20 PRO 20 ? ? ? C .
A 1 21 ILE 21 ? ? ? C .
A 1 22 ALA 22 ? ? ? C .
A 1 23 MET 23 ? ? ? C .
A 1 24 GLN 24 ? ? ? C .
A 1 25 SER 25 ? ? ? C .
A 1 26 GLY 26 ? ? ? C .
A 1 27 PRO 27 ? ? ? C .
A 1 28 LYS 28 ? ? ? C .
A 1 29 PRO 29 ? ? ? C .
A 1 30 LEU 30 ? ? ? C .
A 1 31 PHE 31 ? ? ? C .
A 1 32 ARG 32 ? ? ? C .
A 1 33 ARG 33 ? ? ? C .
A 1 34 MET 34 ? ? ? C .
A 1 35 SER 35 ? ? ? C .
A 1 36 SER 36 ? ? ? C .
A 1 37 LEU 37 ? ? ? C .
A 1 38 GLU 38 38 GLU GLU C .
A 1 39 LEU 39 39 LEU LEU C .
A 1 40 VAL 40 40 VAL VAL C .
A 1 41 ILE 41 41 ILE ILE C .
A 1 42 ALA 42 42 ALA ALA C .
A 1 43 GLY 43 43 GLY GLY C .
A 1 44 ILE 44 44 ILE ILE C .
A 1 45 VAL 45 45 VAL VAL C .
A 1 46 GLU 46 46 GLU GLU C .
A 1 47 ASN 47 47 ASN ASN C .
A 1 48 GLU 48 48 GLU GLU C .
A 1 49 TRP 49 49 TRP TRP C .
A 1 50 LYS 50 50 LYS LYS C .
A 1 51 ARG 51 51 ARG ARG C .
A 1 52 THR 52 52 THR THR C .
A 1 53 CYS 53 ? ? ? C .
A 1 54 SER 54 ? ? ? C .
A 1 55 ARG 55 ? ? ? C .
A 1 56 PRO 56 ? ? ? C .
A 1 57 LYS 57 ? ? ? C .
A 1 58 SER 58 ? ? ? C .
A 1 59 ASN 59 ? ? ? C .
A 1 60 ILE 60 ? ? ? C .
A 1 61 VAL 61 ? ? ? C .
A 1 62 LEU 62 ? ? ? C .
A 1 63 LEU 63 ? ? ? C .
A 1 64 SER 64 ? ? ? C .
A 1 65 ALA 65 ? ? ? C .
A 1 66 GLU 66 ? ? ? C .
A 1 67 GLU 67 ? ? ? C .
A 1 68 LYS 68 ? ? ? C .
A 1 69 LYS 69 ? ? ? C .
A 1 70 GLU 70 ? ? ? C .
A 1 71 GLN 71 ? ? ? C .
A 1 72 THR 72 ? ? ? C .
A 1 73 ILE 73 ? ? ? C .
A 1 74 GLU 74 ? ? ? C .
A 1 75 ILE 75 ? ? ? C .
A 1 76 LYS 76 ? ? ? C .
A 1 77 GLU 77 ? ? ? C .
A 1 78 GLU 78 ? ? ? C .
A 1 79 VAL 79 ? ? ? C .
A 1 80 VAL 80 ? ? ? C .
A 1 81 GLY 81 ? ? ? C .
A 1 82 LEU 82 ? ? ? C .
A 1 83 THR 83 ? ? ? C .
A 1 84 GLU 84 ? ? ? C .
A 1 85 THR 85 ? ? ? C .
A 1 86 SER 86 ? ? ? C .
A 1 87 SER 87 ? ? ? C .
A 1 88 GLN 88 ? ? ? C .
A 1 89 PRO 89 ? ? ? C .
A 1 90 LYS 90 ? ? ? C .
A 1 91 ASN 91 ? ? ? C .
A 1 92 GLU 92 ? ? ? C .
A 1 93 GLU 93 ? ? ? C .
A 1 94 ASP 94 ? ? ? C .
A 1 95 ILE 95 ? ? ? C .
A 1 96 GLU 96 ? ? ? C .
A 1 97 ILE 97 ? ? ? C .
A 1 98 ILE 98 ? ? ? C .
A 1 99 PRO 99 ? ? ? C .
A 1 100 ILE 100 ? ? ? C .
A 1 101 GLN 101 ? ? ? C .
A 1 102 GLU 102 ? ? ? C .
A 1 103 GLU 103 ? ? ? C .
A 1 104 GLU 104 ? ? ? C .
A 1 105 GLU 105 ? ? ? C .
A 1 106 GLU 106 ? ? ? C .
A 1 107 GLU 107 ? ? ? C .
A 1 108 THR 108 ? ? ? C .
A 1 109 GLU 109 ? ? ? C .
A 1 110 THR 110 ? ? ? C .
A 1 111 ASN 111 ? ? ? C .
A 1 112 PHE 112 ? ? ? C .
A 1 113 PRO 113 ? ? ? C .
A 1 114 GLU 114 ? ? ? C .
A 1 115 PRO 115 ? ? ? C .
A 1 116 PRO 116 ? ? ? C .
A 1 117 GLN 117 ? ? ? C .
A 1 118 ASP 118 ? ? ? C .
A 1 119 GLN 119 ? ? ? C .
A 1 120 GLU 120 ? ? ? C .
A 1 121 SER 121 ? ? ? C .
A 1 122 SER 122 ? ? ? C .
A 1 123 PRO 123 ? ? ? C .
A 1 124 ILE 124 ? ? ? C .
A 1 125 GLU 125 ? ? ? C .
A 1 126 ASN 126 ? ? ? C .
A 1 127 ASP 127 ? ? ? C .
A 1 128 SER 128 ? ? ? C .
A 1 129 SER 129 ? ? ? C .
A 1 130 PRO 130 ? ? ? C .
#
#
loop_
_ma_data.id
_ma_data.name
_ma_data.content_type
_ma_data.content_type_other_details
1
'B-lymphocyte antigen CD20 {PDB ID=8vgo, label_asym_id=C, auth_asym_id=G, SMTL ID=8vgo.1.C}'
'template structure' .
2 . target .
3 'Target-template alignment by BLAST to 8vgo, label_asym_id=C'
'target-template alignment' .
4 'model 1' 'model coordinates' .
5 SMTL 'reference database' .
6 PDB 'reference database' .
7 'Template search output' other 'Results of the sequence search'
#
#
loop_
_ma_data_group.ordinal_id
_ma_data_group.group_id
_ma_data_group.data_id
1 1 2
2 1 5
3 1 6
4 2 7
5 3 2
6 3 1
7 3 3
8 4 1
9 4 3
10 5 4
#
#
loop_
_ma_data_ref_db.data_id
_ma_data_ref_db.name
_ma_data_ref_db.location_url
_ma_data_ref_db.version
_ma_data_ref_db.release_date
5 SMTL https://swissmodel.expasy.org/templates/ . 2025-01-22
6 PDB https://www.wwpdb.org . 2025-01-17
#
#
loop_
_ma_target_entity.entity_id
_ma_target_entity.data_id
_ma_target_entity.origin
1 2 'reference database'
#
#
loop_
_ma_target_entity_instance.asym_id
_ma_target_entity_instance.entity_id
_ma_target_entity_instance.details
A 1 .
#
#
loop_
_ma_template_trans_matrix.id
_ma_template_trans_matrix.rot_matrix[1][1]
_ma_template_trans_matrix.rot_matrix[2][1]
_ma_template_trans_matrix.rot_matrix[3][1]
_ma_template_trans_matrix.rot_matrix[1][2]
_ma_template_trans_matrix.rot_matrix[2][2]
_ma_template_trans_matrix.rot_matrix[3][2]
_ma_template_trans_matrix.rot_matrix[1][3]
_ma_template_trans_matrix.rot_matrix[2][3]
_ma_template_trans_matrix.rot_matrix[3][3]
_ma_template_trans_matrix.tr_vector[1]
_ma_template_trans_matrix.tr_vector[2]
_ma_template_trans_matrix.tr_vector[3]
1 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000
1.000000 0 0 0
#
#
loop_
_ma_template_details.ordinal_id
_ma_template_details.template_id
_ma_template_details.template_origin
_ma_template_details.template_entity_type
_ma_template_details.template_trans_matrix_id
_ma_template_details.template_data_id
_ma_template_details.target_asym_id
_ma_template_details.template_label_asym_id
_ma_template_details.template_label_entity_id
_ma_template_details.template_model_num
_ma_template_details.template_auth_asym_id
1 1 'reference database' polymer 1 1 A C 3 1 G
#
#
loop_
_ma_template_poly.template_id
_ma_template_poly.seq_one_letter_code
_ma_template_poly.seq_one_letter_code_can
1
;MGSTQSFFMRESKTLGAVQIMNGLFHIALGGLLMIPAGIYAPICVTVWYPLWGGIMYIISGSLLAATEKN
SRKCLVKGKMIMNSLSLFAAISGMILSIMDILNIKISHFLKMESLNFIRAHTPYINIYNCEPANPSEKNS
PSTQYCYSIQSLFLGILSVMLIFAFFQELVIAGIVENEWKRTCSRPKSNIVLLSAEEKKEQTIEIKEEVV
GLTETSSQPKNEEDIEIIPIQEEEEEETETNFPEPPQDQESSPIENDSSPGNSENLYFQGHHHHHHHH
;

;MGSTQSFFMRESKTLGAVQIMNGLFHIALGGLLMIPAGIYAPICVTVWYPLWGGIMYIISGSLLAATEKN
SRKCLVKGKMIMNSLSLFAAISGMILSIMDILNIKISHFLKMESLNFIRAHTPYINIYNCEPANPSEKNS
PSTQYCYSIQSLFLGILSVMLIFAFFQELVIAGIVENEWKRTCSRPKSNIVLLSAEEKKEQTIEIKEEVV
GLTETSSQPKNEEDIEIIPIQEEEEEETETNFPEPPQDQESSPIENDSSPGNSENLYFQGHHHHHHHH
;

#
#
loop_
_ma_template_poly_segment.id
_ma_template_poly_segment.template_id
_ma_template_poly_segment.residue_number_begin
_ma_template_poly_segment.residue_number_end
1 1 168 260
#
#
loop_
_ma_template_ref_db_details.template_id
_ma_template_ref_db_details.db_name
_ma_template_ref_db_details.db_name_other_details
_ma_template_ref_db_details.db_accession_code
_ma_template_ref_db_details.db_version_date
1 PDB . 8vgo 2024-11-27
#
#
loop_
_ma_target_template_poly_mapping.id
_ma_target_template_poly_mapping.template_segment_id
_ma_target_template_poly_mapping.target_asym_id
_ma_target_template_poly_mapping.target_seq_id_begin
_ma_target_template_poly_mapping.target_seq_id_end
1 1 A 1 130
#
#
loop_
_ma_alignment_info.alignment_id
_ma_alignment_info.data_id
_ma_alignment_info.software_group_id
_ma_alignment_info.alignment_length
_ma_alignment_info.alignment_type
_ma_alignment_info.alignment_mode
1 3 1 130 'target-template pairwise alignment' local
#
#
loop_
_ma_alignment_details.ordinal_id
_ma_alignment_details.alignment_id
_ma_alignment_details.template_segment_id
_ma_alignment_details.target_asym_id
_ma_alignment_details.score_type
_ma_alignment_details.score_type_other_details
_ma_alignment_details.score_value
_ma_alignment_details.percent_sequence_identity
_ma_alignment_details.sequence_identity_denominator
_ma_alignment_details.sequence_identity_denominator_other_details
1 1 1 A 'BLAST e-value' . 7.93e-22 100.000
'Number of aligned residue pairs (not including the gaps)' .
#
#
loop_
_ma_alignment.ordinal_id
_ma_alignment.alignment_id
_ma_alignment.target_template_flag
_ma_alignment.sequence
1 1 1
MTTPRNSVNGTFPAEPMKGPIAMQSGPKPLFRRMSSLELVIAGIVENEWKRTCSRPKSNIVLLSAEEKKEQTIEIKEEVVGLTETSSQPKNEEDIEIIPIQEEEEEETETNFPEPPQDQESSPIENDSSP
2 1 2
-------------------------------------ELVIAGIVENEWKRTCSRPKSNIVLLSAEEKKEQTIEIKEEVVGLTETSSQPKNEEDIEIIPIQEEEEEETETNFPEPPQDQESSPIENDSSP
#
#
loop_
_ma_protocol_step.ordinal_id
_ma_protocol_step.protocol_id
_ma_protocol_step.step_id
_ma_protocol_step.method_type
_ma_protocol_step.step_name
_ma_protocol_step.details
_ma_protocol_step.software_group_id
_ma_protocol_step.input_data_group_id
_ma_protocol_step.output_data_group_id
1 1 1 'template search' 'template search' 'SWISS-MODEL template search in PDB' 2
1 2
2 1 2 'template selection' 'template selection'
'Automatic template selection by SWISS-MODEL {QSQE=0.000}' 3 2 4
3 1 3 modeling 'homology modeling'
'SWISS-MODEL auto-model mode using ProMod3 on 8vgo.1' 4 3 5
#
#
loop_
_ma_model_list.ordinal_id
_ma_model_list.model_id
_ma_model_list.model_group_id
_ma_model_list.model_name
_ma_model_list.model_group_name
_ma_model_list.data_id
_ma_model_list.model_type
_ma_model_list.model_type_other_details
1 1 1 'model 1' . 4 'Homology model' .
#
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_alt_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.auth_seq_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.label_entity_id
_atom_site.auth_asym_id
_atom_site.auth_comp_id
_atom_site.B_iso_or_equiv
_atom_site.pdbx_PDB_model_num
ATOM 1 N N . GLU 38 38 ? A 176.308 194.570 215.019 1 1 C GLU 0.580 1
ATOM 2 C CA . GLU 38 38 ? A 175.035 195.110 215.597 1 1 C GLU 0.580 1
ATOM 3 C C . GLU 38 38 ? A 174.693 194.370 216.885 1 1 C GLU 0.580 1
ATOM 4 O O . GLU 38 38 ? A 174.784 194.976 217.939 1 1 C GLU 0.580 1
ATOM 5 C CB . GLU 38 38 ? A 173.958 195.172 214.480 1 1 C GLU 0.580 1
ATOM 6 C CG . GLU 38 38 ? A 172.811 196.176 214.770 1 1 C GLU 0.580 1
ATOM 7 C CD . GLU 38 38 ? A 171.888 195.668 215.870 1 1 C GLU 0.580 1
ATOM 8 O OE1 . GLU 38 38 ? A 171.742 194.422 215.957 1 1 C GLU 0.580 1
ATOM 9 O OE2 . GLU 38 38 ? A 171.406 196.512 216.657 1 1 C GLU 0.580 1
ATOM 10 N N . LEU 39 39 ? A 174.464 193.027 216.852 1 1 C LEU 0.590 1
ATOM 11 C CA . LEU 39 39 ? A 174.042 192.214 217.992 1 1 C LEU 0.590 1
ATOM 12 C C . LEU 39 39 ? A 174.860 192.390 219.266 1 1 C LEU 0.590 1
ATOM 13 O O . LEU 39 39 ? A 174.332 192.602 220.359 1 1 C LEU 0.590 1
ATOM 14 C CB . LEU 39 39 ? A 174.106 190.712 217.574 1 1 C LEU 0.590 1
ATOM 15 C CG . LEU 39 39 ? A 172.764 190.131 217.078 1 1 C LEU 0.590 1
ATOM 16 C CD1 . LEU 39 39 ? A 172.171 190.862 215.858 1 1 C LEU 0.590 1
ATOM 17 C CD2 . LEU 39 39 ? A 172.907 188.625 216.790 1 1 C LEU 0.590 1
ATOM 18 N N . VAL 40 40 ? A 176.196 192.336 219.147 1 1 C VAL 0.630 1
ATOM 19 C CA . VAL 40 40 ? A 177.110 192.524 220.259 1 1 C VAL 0.630 1
ATOM 20 C C . VAL 40 40 ? A 177.125 193.939 220.829 1 1 C VAL 0.630 1
ATOM 21 O O . VAL 40 40 ? A 177.139 194.128 222.044 1 1 C VAL 0.630 1
ATOM 22 C CB . VAL 40 40 ? A 178.516 192.025 219.926 1 1 C VAL 0.630 1
ATOM 23 C CG1 . VAL 40 40 ? A 178.422 190.528 219.558 1 1 C VAL 0.630 1
ATOM 24 C CG2 . VAL 40 40 ? A 179.224 192.829 218.808 1 1 C VAL 0.630 1
ATOM 25 N N . ILE 41 41 ? A 177.083 194.976 219.964 1 1 C ILE 0.650 1
ATOM 26 C CA . ILE 41 41 ? A 177.026 196.386 220.332 1 1 C ILE 0.650 1
ATOM 27 C C . ILE 41 41 ? A 175.686 196.716 220.973 1 1 C ILE 0.650 1
ATOM 28 O O . ILE 41 41 ? A 175.640 197.420 221.979 1 1 C ILE 0.650 1
ATOM 29 C CB . ILE 41 41 ? A 177.341 197.328 219.164 1 1 C ILE 0.650 1
ATOM 30 C CG1 . ILE 41 41 ? A 178.726 197.001 218.542 1 1 C ILE 0.650 1
ATOM 31 C CG2 . ILE 41 41 ? A 177.320 198.800 219.657 1 1 C ILE 0.650 1
ATOM 32 C CD1 . ILE 41 41 ? A 178.908 197.576 217.130 1 1 C ILE 0.650 1
ATOM 33 N N . ALA 42 42 ? A 174.559 196.161 220.467 1 1 C ALA 0.700 1
ATOM 34 C CA . ALA 42 42 ? A 173.241 196.242 221.072 1 1 C ALA 0.700 1
ATOM 35 C C . ALA 42 42 ? A 173.247 195.665 222.480 1 1 C ALA 0.700 1
ATOM 36 O O . ALA 42 42 ? A 172.735 196.286 223.410 1 1 C ALA 0.700 1
ATOM 37 C CB . ALA 42 42 ? A 172.199 195.505 220.201 1 1 C ALA 0.700 1
ATOM 38 N N . GLY 43 43 ? A 173.953 194.536 222.710 1 1 C GLY 0.680 1
ATOM 39 C CA . GLY 43 43 ? A 174.096 193.907 224.025 1 1 C GLY 0.680 1
ATOM 40 C C . GLY 43 43 ? A 174.982 194.658 224.997 1 1 C GLY 0.680 1
ATOM 41 O O . GLY 43 43 ? A 175.132 194.263 226.153 1 1 C GLY 0.680 1
ATOM 42 N N . ILE 44 44 ? A 175.586 195.771 224.548 1 1 C ILE 0.690 1
ATOM 43 C CA . ILE 44 44 ? A 176.345 196.707 225.357 1 1 C ILE 0.690 1
ATOM 44 C C . ILE 44 44 ? A 175.584 198.014 225.487 1 1 C ILE 0.690 1
ATOM 45 O O . ILE 44 44 ? A 175.286 198.446 226.596 1 1 C ILE 0.690 1
ATOM 46 C CB . ILE 44 44 ? A 177.726 196.953 224.760 1 1 C ILE 0.690 1
ATOM 47 C CG1 . ILE 44 44 ? A 178.533 195.633 224.801 1 1 C ILE 0.690 1
ATOM 48 C CG2 . ILE 44 44 ? A 178.478 198.093 225.498 1 1 C ILE 0.690 1
ATOM 49 C CD1 . ILE 44 44 ? A 179.736 195.633 223.853 1 1 C ILE 0.690 1
ATOM 50 N N . VAL 45 45 ? A 175.228 198.682 224.364 1 1 C VAL 0.700 1
ATOM 51 C CA . VAL 45 45 ? A 174.649 200.024 224.314 1 1 C VAL 0.700 1
ATOM 52 C C . VAL 45 45 ? A 173.260 200.112 224.925 1 1 C VAL 0.700 1
ATOM 53 O O . VAL 45 45 ? A 172.906 201.120 225.541 1 1 C VAL 0.700 1
ATOM 54 C CB . VAL 45 45 ? A 174.727 200.655 222.923 1 1 C VAL 0.700 1
ATOM 55 C CG1 . VAL 45 45 ? A 174.140 202.084 222.911 1 1 C VAL 0.700 1
ATOM 56 C CG2 . VAL 45 45 ? A 176.217 200.740 222.529 1 1 C VAL 0.700 1
ATOM 57 N N . GLU 46 46 ? A 172.475 199.015 224.854 1 1 C GLU 0.710 1
ATOM 58 C CA . GLU 46 46 ? A 171.214 198.845 225.563 1 1 C GLU 0.710 1
ATOM 59 C C . GLU 46 46 ? A 171.425 198.973 227.070 1 1 C GLU 0.710 1
ATOM 60 O O . GLU 46 46 ? A 170.671 199.630 227.790 1 1 C GLU 0.710 1
ATOM 61 C CB . GLU 46 46 ? A 170.608 197.466 225.183 1 1 C GLU 0.710 1
ATOM 62 C CG . GLU 46 46 ? A 169.365 196.986 225.979 1 1 C GLU 0.710 1
ATOM 63 C CD . GLU 46 46 ? A 168.148 197.900 226.021 1 1 C GLU 0.710 1
ATOM 64 O OE1 . GLU 46 46 ? A 168.147 199.053 225.530 1 1 C GLU 0.710 1
ATOM 65 O OE2 . GLU 46 46 ? A 167.162 197.486 226.693 1 1 C GLU 0.710 1
ATOM 66 N N . ASN 47 47 ? A 172.540 198.416 227.583 1 1 C ASN 0.710 1
ATOM 67 C CA . ASN 47 47 ? A 172.932 198.573 228.966 1 1 C ASN 0.710 1
ATOM 68 C C . ASN 47 47 ? A 173.550 199.941 229.234 1 1 C ASN 0.710 1
ATOM 69 O O . ASN 47 47 ? A 173.385 200.461 230.335 1 1 C ASN 0.710 1
ATOM 70 C CB . ASN 47 47 ? A 173.939 197.495 229.439 1 1 C ASN 0.710 1
ATOM 71 C CG . ASN 47 47 ? A 173.347 196.101 229.321 1 1 C ASN 0.710 1
ATOM 72 O OD1 . ASN 47 47 ? A 172.128 195.904 229.223 1 1 C ASN 0.710 1
ATOM 73 N ND2 . ASN 47 47 ? A 174.215 195.073 229.362 1 1 C ASN 0.710 1
ATOM 74 N N . GLU 48 48 ? A 174.299 200.548 228.273 1 1 C GLU 0.690 1
ATOM 75 C CA . GLU 48 48 ? A 174.988 201.830 228.448 1 1 C GLU 0.690 1
ATOM 76 C C . GLU 48 48 ? A 174.050 202.952 228.811 1 1 C GLU 0.690 1
ATOM 77 O O . GLU 48 48 ? A 174.209 203.534 229.879 1 1 C GLU 0.690 1
ATOM 78 C CB . GLU 48 48 ? A 175.802 202.298 227.199 1 1 C GLU 0.690 1
ATOM 79 C CG . GLU 48 48 ? A 177.016 201.410 226.817 1 1 C GLU 0.690 1
ATOM 80 C CD . GLU 48 48 ? A 178.257 201.626 227.671 1 1 C GLU 0.690 1
ATOM 81 O OE1 . GLU 48 48 ? A 178.140 201.421 228.911 1 1 C GLU 0.690 1
ATOM 82 O OE2 . GLU 48 48 ? A 179.330 201.920 227.104 1 1 C GLU 0.690 1
ATOM 83 N N . TRP 49 49 ? A 173.001 203.187 228.001 1 1 C TRP 0.590 1
ATOM 84 C CA . TRP 49 49 ? A 172.047 204.270 228.218 1 1 C TRP 0.590 1
ATOM 85 C C . TRP 49 49 ? A 170.962 203.915 229.201 1 1 C TRP 0.590 1
ATOM 86 O O . TRP 49 49 ? A 170.173 204.772 229.587 1 1 C TRP 0.590 1
ATOM 87 C CB . TRP 49 49 ? A 171.332 204.704 226.917 1 1 C TRP 0.590 1
ATOM 88 C CG . TRP 49 49 ? A 172.248 205.335 225.888 1 1 C TRP 0.590 1
ATOM 89 C CD1 . TRP 49 49 ? A 172.835 204.726 224.822 1 1 C TRP 0.590 1
ATOM 90 C CD2 . TRP 49 49 ? A 172.642 206.714 225.851 1 1 C TRP 0.590 1
ATOM 91 N NE1 . TRP 49 49 ? A 173.575 205.637 224.106 1 1 C TRP 0.590 1
ATOM 92 C CE2 . TRP 49 49 ? A 173.474 206.870 224.705 1 1 C TRP 0.590 1
ATOM 93 C CE3 . TRP 49 49 ? A 172.364 207.794 226.677 1 1 C TRP 0.590 1
ATOM 94 C CZ2 . TRP 49 49 ? A 174.007 208.109 224.390 1 1 C TRP 0.590 1
ATOM 95 C CZ3 . TRP 49 49 ? A 172.901 209.043 226.348 1 1 C TRP 0.590 1
ATOM 96 C CH2 . TRP 49 49 ? A 173.711 209.203 225.214 1 1 C TRP 0.590 1
ATOM 97 N N . LYS 50 50 ? A 170.854 202.672 229.680 1 1 C LYS 0.690 1
ATOM 98 C CA . LYS 50 50 ? A 170.072 202.382 230.862 1 1 C LYS 0.690 1
ATOM 99 C C . LYS 50 50 ? A 170.865 202.531 232.142 1 1 C LYS 0.690 1
ATOM 100 O O . LYS 50 50 ? A 170.290 202.621 233.226 1 1 C LYS 0.690 1
ATOM 101 C CB . LYS 50 50 ? A 169.478 200.972 230.789 1 1 C LYS 0.690 1
ATOM 102 C CG . LYS 50 50 ? A 168.342 200.945 229.765 1 1 C LYS 0.690 1
ATOM 103 C CD . LYS 50 50 ? A 167.599 199.609 229.812 1 1 C LYS 0.690 1
ATOM 104 C CE . LYS 50 50 ? A 166.247 199.617 229.099 1 1 C LYS 0.690 1
ATOM 105 N NZ . LYS 50 50 ? A 166.441 199.802 227.655 1 1 C LYS 0.690 1
ATOM 106 N N . ARG 51 51 ? A 172.204 202.600 232.051 1 1 C ARG 0.830 1
ATOM 107 C CA . ARG 51 51 ? A 173.060 202.967 233.152 1 1 C ARG 0.830 1
ATOM 108 C C . ARG 51 51 ? A 173.349 204.472 233.146 1 1 C ARG 0.830 1
ATOM 109 O O . ARG 51 51 ? A 174.013 204.943 234.072 1 1 C ARG 0.830 1
ATOM 110 C CB . ARG 51 51 ? A 174.414 202.197 233.040 1 1 C ARG 0.830 1
ATOM 111 C CG . ARG 51 51 ? A 174.361 200.743 233.569 1 1 C ARG 0.830 1
ATOM 112 C CD . ARG 51 51 ? A 175.696 199.969 233.559 1 1 C ARG 0.830 1
ATOM 113 N NE . ARG 51 51 ? A 175.926 199.400 232.182 1 1 C ARG 0.830 1
ATOM 114 C CZ . ARG 51 51 ? A 176.726 199.933 231.261 1 1 C ARG 0.830 1
ATOM 115 N NH1 . ARG 51 51 ? A 177.333 201.112 231.402 1 1 C ARG 0.830 1
ATOM 116 N NH2 . ARG 51 51 ? A 176.911 199.390 230.057 1 1 C ARG 0.830 1
ATOM 117 N N . THR 52 52 ? A 172.894 205.259 232.138 1 1 C THR 0.860 1
ATOM 118 C CA . THR 52 52 ? A 173.262 206.671 231.985 1 1 C THR 0.860 1
ATOM 119 C C . THR 52 52 ? A 172.113 207.603 231.517 1 1 C THR 0.860 1
ATOM 120 O O . THR 52 52 ? A 170.928 207.203 231.563 1 1 C THR 0.860 1
ATOM 121 C CB . THR 52 52 ? A 174.484 206.938 231.087 1 1 C THR 0.860 1
ATOM 122 O OG1 . THR 52 52 ? A 174.405 206.402 229.774 1 1 C THR 0.860 1
ATOM 123 C CG2 . THR 52 52 ? A 175.725 206.303 231.720 1 1 C THR 0.860 1
ATOM 124 O OXT . THR 52 52 ? A 172.418 208.780 231.180 1 1 C THR 0.860 1
#
#
loop_
_atom_type.symbol
C
N
O
#
#
loop_
_ma_qa_metric.id
_ma_qa_metric.name
_ma_qa_metric.description
_ma_qa_metric.type
_ma_qa_metric.mode
_ma_qa_metric.type_other_details
_ma_qa_metric.software_group_id
1 QMEANDisCo 'Predicted accuracy according to all-atom lDDT in [0,1].'
'pLDDT all-atom in [0,1]' local . 5
2 QMEANDisCo 'Predicted accuracy according to all-atom lDDT in [0,1].'
'pLDDT all-atom in [0,1]' global . 5
3 GMQE
'Global Model Quality Estimate of the model accuracy, calculated by SWISS-MODEL.'
'normalized score' global . 6
#
#
loop_
_ma_qa_metric_global.ordinal_id
_ma_qa_metric_global.model_id
_ma_qa_metric_global.metric_id
_ma_qa_metric_global.metric_value
1 1 2 0.687
2 1 3 0.198
#
#
loop_
_ma_qa_metric_local.ordinal_id
_ma_qa_metric_local.model_id
_ma_qa_metric_local.label_asym_id
_ma_qa_metric_local.label_seq_id
_ma_qa_metric_local.label_comp_id
_ma_qa_metric_local.metric_id
_ma_qa_metric_local.metric_value
1 1 A 38 GLU 1 0.580
2 1 A 39 LEU 1 0.590
3 1 A 40 VAL 1 0.630
4 1 A 41 ILE 1 0.650
5 1 A 42 ALA 1 0.700
6 1 A 43 GLY 1 0.680
7 1 A 44 ILE 1 0.690
8 1 A 45 VAL 1 0.700
9 1 A 46 GLU 1 0.710
10 1 A 47 ASN 1 0.710
11 1 A 48 GLU 1 0.690
12 1 A 49 TRP 1 0.590
13 1 A 50 LYS 1 0.690
14 1 A 51 ARG 1 0.830
15 1 A 52 THR 1 0.860
#
#
loop_
_pdbx_data_usage.id
_pdbx_data_usage.type
_pdbx_data_usage.details
_pdbx_data_usage.url
1 license
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https://creativecommons.org/licenses/by-sa/4.0/legalcode
2 disclaimer
;The SWISS-MODEL SERVER produces theoretical models for
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