data_SMR-d40106c486a8494809d4ea0c4560eb13_2
_entry.id SMR-d40106c486a8494809d4ea0c4560eb13_2
_struct.entry_id SMR-d40106c486a8494809d4ea0c4560eb13_2
_struct.pdbx_model_details
;This model was generated unsupervised by the SWISS-MODEL homology-modelling pipeline for the SWISS-MODEL Repository, a database of annotated 3D protein structure models. The modelled monomer covers following UniProtKB entries:

  - P34453/ PEX19_CAEEL, Putative peroxisomal biogenesis factor 19

Estimated model accuracy of this model is 0.007, calculated by SWISS-MODEL as Global Model Quality Estimate (GMQE).
;
_struct.pdbx_structure_determination_methodology computational
_struct.title 'Model for UniProtKB entries P34453'
_audit_conform.dict_location https://raw.githubusercontent.com/ihmwg/ModelCIF/d18ba38/base/mmcif_ma-core.dic
_audit_conform.dict_name mmcif_ma.dic
_audit_conform.dict_version 1.4.6
#
loop_
_citation.id
_citation.title
_citation.journal_abbrev
_citation.journal_volume
_citation.page_first
_citation.page_last
_citation.year
_citation.pdbx_database_id_PubMed
_citation.pdbx_database_id_DOI
primary 'The SWISS-MODEL Repository - new features and functionality'
'Nucleic Acids Res.' 45 D313 D319 2017 27899672 10.1093/nar/gkw1132
2 'SWISS-MODEL: homology modelling of protein structures and complexes'
'Nucleic Acids Res.' 46 W296 W303 2018 29788355 10.1093/nar/gky427
3 'ProMod3 - A versatile homology modelling toolbox' 'PLoS Comput. Biol.' 17(1)
1 18 2021 33507980 10.1371/journal.pcbi.1008667
4 'QMEANDisCo - distance constraints applied on model quality estimation'
Bioinformatics 36 1765 1771 2020 31697312 10.1093/bioinformatics/btz828
5
'OpenStructure: an integrated software framework for computational structural biology'
'Acta Crystallogr., Sect. D: Biol. Crystallogr.' 69 701 709 2013 23633579
10.1107/S0907444913007051
6 'BLAST+: architecture and applications' 'BMC Bioinf.' 10 421 . 2009 20003500
10.1186/1471-2105-10-421
7 'HH-suite3 for fast remote homology detection and deep protein annotation'
'BMC Bioinf.' 20 473 . 2019 31521110 10.1186/s12859-019-3019-7
#
#
loop_
_citation_author.citation_id
_citation_author.name
_citation_author.ordinal
primary 'Bienert, S.' 1
primary 'Waterhouse, A.' 2
primary 'de Beer, T.A.P.' 3
primary 'Tauriello, G.' 4
primary 'Studer, G.' 5
primary 'Bordoli, L.' 6
primary 'Schwede, T.' 7
2 'Waterhouse, A.' 8
2 'Bertoni, M.' 9
2 'Bienert, S.' 10
2 'Studer, G.' 11
2 'Tauriello, G.' 12
2 'Gumienny, R.' 13
2 'Heer, F.T.' 14
2 'de Beer, T.A.P.' 15
2 'Rempfer, C.' 16
2 'Bordoli, L.' 17
2 'Lepore, R.' 18
2 'Schwede, T.' 19
3 'Studer, G.' 20
3 'Tauriello, G.' 21
3 'Bienert, S.' 22
3 'Biasini, M.' 23
3 'Johner, N.' 24
3 'Schwede, T.' 25
4 'Studer, G.' 26
4 'Rempfer, C.' 27
4 'Waterhouse, A.M.' 28
4 'Gumienny, R.' 29
4 'Haas, J.' 30
4 'Schwede, T.' 31
5 'Biasini, M.' 32
5 'Schmidt, T.' 33
5 'Bienert, S.' 34
5 'Mariani, V.' 35
5 'Studer, G.' 36
5 'Haas, J.' 37
5 'Johner, N.' 38
5 'Schenk, A.D.' 39
5 'Philippsen, A.' 40
5 'Schwede, T.' 41
6 'Camacho, C.' 42
6 'Coulouris, G.' 43
6 'Avagyan, V.' 44
6 'Ma, N.' 45
6 'Papadopoulos, J.' 46
6 'Bealer, K.' 47
6 'Madden, T.L.' 48
7 'Steinegger, M.' 49
7 'Meier, M.' 50
7 'Mirdita, M.' 51
7 'Vohringer, H.' 52
7 'Haunsberger, S.J.' 53
7 'Soding, J.' 54
#
#
loop_
_software.pdbx_ordinal
_software.name
_software.classification
_software.description
_software.version
_software.type
_software.location
_software.citation_id
1 SWISS-MODEL 'model building' 'Homology modelling web service'
2512d1755cebc94443edf017bed62a02253bd792 package https://swissmodel.expasy.org 2
2 ProMod3 'model building' 'Modular homology modelling engine' 3.4.1 library
https://git.scicore.unibas.ch/schwede/ProMod3 3
3 QMEAN 'model building' 'QMEAN - Qualitative Model Energy ANalysis' 4.3.1
library https://git.scicore.unibas.ch/schwede/QMEAN 4
4 OpenStructure 'data processing'
'Open-Source Computational Structural Biology Framework' 2.8.0 package
https://openstructure.org/ 5
5 BLAST 'data collection' . 2.2.31 package https://blast.ncbi.nlm.nih.gov 6
6 HH-suite 'data collection' 'HH-suite3 for sensitive sequence searching' 3.2.0
package https://github.com/soedinglab/hh-suite 7
#
#
loop_
_ma_software_group.ordinal_id
_ma_software_group.group_id
_ma_software_group.software_id
_ma_software_group.parameter_group_id
1 1 6 .
2 2 1 .
3 2 4 .
4 2 5 .
5 2 6 .
6 3 1 .
7 3 4 .
8 4 1 .
9 4 2 .
10 4 4 .
11 5 3 .
12 6 1 .
13 6 3 .
14 6 4 .
#
#
loop_
_audit_author.name
_audit_author.pdbx_ordinal
'Bienert, S.' 1
'Waterhouse, A.' 2
'de Beer, T.A.P.' 3
'Tauriello, G.' 4
'Studer, G.' 5
'Bordoli, L.' 6
'Schwede, T.' 7
#
#
loop_
_chem_comp.id
_chem_comp.type
_chem_comp.name
_chem_comp.formula
_chem_comp.formula_weight
_chem_comp.ma_provenance
ALA 'L-peptide linking' ALANINE 'C3 H7 N O2' 89.094 'CCD Core'
ARG 'L-peptide linking' ARGININE 'C6 H15 N4 O2 1' 175.212 'CCD Core'
ASN 'L-peptide linking' ASPARAGINE 'C4 H8 N2 O3' 132.119 'CCD Core'
ASP 'L-peptide linking' 'ASPARTIC ACID' 'C4 H7 N O4' 133.103 'CCD Core'
CYS 'L-peptide linking' CYSTEINE 'C3 H7 N O2 S' 121.154 'CCD Core'
GLN 'L-peptide linking' GLUTAMINE 'C5 H10 N2 O3' 146.146 'CCD Core'
GLU 'L-peptide linking' 'GLUTAMIC ACID' 'C5 H9 N O4' 147.130 'CCD Core'
GLY 'peptide linking' GLYCINE 'C2 H5 N O2' 75.067 'CCD Core'
HIS 'L-peptide linking' HISTIDINE 'C6 H10 N3 O2 1' 156.165 'CCD Core'
ILE 'L-peptide linking' ISOLEUCINE 'C6 H13 N O2' 131.175 'CCD Core'
LEU 'L-peptide linking' LEUCINE 'C6 H13 N O2' 131.175 'CCD Core'
LYS 'L-peptide linking' LYSINE 'C6 H15 N2 O2 1' 147.198 'CCD Core'
MET 'L-peptide linking' METHIONINE 'C5 H11 N O2 S' 149.208 'CCD Core'
PHE 'L-peptide linking' PHENYLALANINE 'C9 H11 N O2' 165.192 'CCD Core'
PRO 'L-peptide linking' PROLINE 'C5 H9 N O2' 115.132 'CCD Core'
SER 'L-peptide linking' SERINE 'C3 H7 N O3' 105.093 'CCD Core'
THR 'L-peptide linking' THREONINE 'C4 H9 N O3' 119.120 'CCD Core'
TRP 'L-peptide linking' TRYPTOPHAN 'C11 H12 N2 O2' 204.229 'CCD Core'
TYR 'L-peptide linking' TYROSINE 'C9 H11 N O3' 181.191 'CCD Core'
VAL 'L-peptide linking' VALINE 'C5 H11 N O2' 117.148 'CCD Core'
#
#
loop_
_entity.id
_entity.type
_entity.src_method
_entity.pdbx_description
_entity.formula_weight
_entity.pdbx_number_of_molecules
_entity.details
1 polymer man . 36074.264 1 .
#
#
loop_
_struct_ref.id
_struct_ref.entity_id
_struct_ref.db_name
_struct_ref.db_code
_struct_ref.pdbx_db_accession
_struct_ref.pdbx_align_begin
_struct_ref.pdbx_seq_one_letter_code
_struct_ref.details
1 1 UNP PEX19_CAEEL P34453 1
;MTDETTQNIKDKTEEELAALLDQTLGEFTATPAPKPRTTDDELDELMASADQEAAQKAAKDFQKMLEQMV
TLQEEAMKKAGADPSEGEGEQPLDPNDPEALAMMDALKQLMECSSNVANASNPEEFMAGLDMLRSPNSPM
EPFMSMIMQTLASKEVMYPPLKEIFDNYPKYLEDNGAGLDAETKERYEKQFEVLGKICTEFEKQPELAEV
QPVDAATQPAPEADPASIEHFEKLGKLLVELQQYGYPPKELVGALPDGWQIDESGLPKVADAAAATEACS
IM
;
'Putative peroxisomal biogenesis factor 19'
#
#
loop_
_struct_ref_seq.align_id
_struct_ref_seq.ref_id
_struct_ref_seq.seq_align_beg
_struct_ref_seq.seq_align_end
_struct_ref_seq.db_align_beg
_struct_ref_seq.db_align_end
1 1 1 282 1 282
#
#
loop_
_ma_target_ref_db_details.target_entity_id
_ma_target_ref_db_details.db_name
_ma_target_ref_db_details.db_name_other_details
_ma_target_ref_db_details.db_code
_ma_target_ref_db_details.db_accession
_ma_target_ref_db_details.seq_db_isoform
_ma_target_ref_db_details.seq_db_align_begin
_ma_target_ref_db_details.seq_db_align_end
_ma_target_ref_db_details.ncbi_taxonomy_id
_ma_target_ref_db_details.organism_scientific
_ma_target_ref_db_details.seq_db_sequence_version_date
_ma_target_ref_db_details.seq_db_sequence_checksum
1 UNP . PEX19_CAEEL P34453 . 1 282 6239 'Caenorhabditis elegans' 1994-02-01
681FBDF8FF08DBE4
#
#
loop_
_entity_poly.entity_id
_entity_poly.type
_entity_poly.nstd_linkage
_entity_poly.nstd_monomer
_entity_poly.pdbx_strand_id
_entity_poly.pdbx_seq_one_letter_code
_entity_poly.pdbx_seq_one_letter_code_can
1 polypeptide(L) no no B
;MTDETTQNIKDKTEEELAALLDQTLGEFTATPAPKPRTTDDELDELMASADQEAAQKAAKDFQKMLEQMV
TLQEEAMKKAGADPSEGEGEQPLDPNDPEALAMMDALKQLMECSSNVANASNPEEFMAGLDMLRSPNSPM
EPFMSMIMQTLASKEVMYPPLKEIFDNYPKYLEDNGAGLDAETKERYEKQFEVLGKICTEFEKQPELAEV
QPVDAATQPAPEADPASIEHFEKLGKLLVELQQYGYPPKELVGALPDGWQIDESGLPKVADAAAATEACS
IM
;

;MTDETTQNIKDKTEEELAALLDQTLGEFTATPAPKPRTTDDELDELMASADQEAAQKAAKDFQKMLEQMV
TLQEEAMKKAGADPSEGEGEQPLDPNDPEALAMMDALKQLMECSSNVANASNPEEFMAGLDMLRSPNSPM
EPFMSMIMQTLASKEVMYPPLKEIFDNYPKYLEDNGAGLDAETKERYEKQFEVLGKICTEFEKQPELAEV
QPVDAATQPAPEADPASIEHFEKLGKLLVELQQYGYPPKELVGALPDGWQIDESGLPKVADAAAATEACS
IM
;

#
#
loop_
_entity_poly_seq.entity_id
_entity_poly_seq.num
_entity_poly_seq.mon_id
_entity_poly_seq.hetero
1 1 MET .
1 2 THR .
1 3 ASP .
1 4 GLU .
1 5 THR .
1 6 THR .
1 7 GLN .
1 8 ASN .
1 9 ILE .
1 10 LYS .
1 11 ASP .
1 12 LYS .
1 13 THR .
1 14 GLU .
1 15 GLU .
1 16 GLU .
1 17 LEU .
1 18 ALA .
1 19 ALA .
1 20 LEU .
1 21 LEU .
1 22 ASP .
1 23 GLN .
1 24 THR .
1 25 LEU .
1 26 GLY .
1 27 GLU .
1 28 PHE .
1 29 THR .
1 30 ALA .
1 31 THR .
1 32 PRO .
1 33 ALA .
1 34 PRO .
1 35 LYS .
1 36 PRO .
1 37 ARG .
1 38 THR .
1 39 THR .
1 40 ASP .
1 41 ASP .
1 42 GLU .
1 43 LEU .
1 44 ASP .
1 45 GLU .
1 46 LEU .
1 47 MET .
1 48 ALA .
1 49 SER .
1 50 ALA .
1 51 ASP .
1 52 GLN .
1 53 GLU .
1 54 ALA .
1 55 ALA .
1 56 GLN .
1 57 LYS .
1 58 ALA .
1 59 ALA .
1 60 LYS .
1 61 ASP .
1 62 PHE .
1 63 GLN .
1 64 LYS .
1 65 MET .
1 66 LEU .
1 67 GLU .
1 68 GLN .
1 69 MET .
1 70 VAL .
1 71 THR .
1 72 LEU .
1 73 GLN .
1 74 GLU .
1 75 GLU .
1 76 ALA .
1 77 MET .
1 78 LYS .
1 79 LYS .
1 80 ALA .
1 81 GLY .
1 82 ALA .
1 83 ASP .
1 84 PRO .
1 85 SER .
1 86 GLU .
1 87 GLY .
1 88 GLU .
1 89 GLY .
1 90 GLU .
1 91 GLN .
1 92 PRO .
1 93 LEU .
1 94 ASP .
1 95 PRO .
1 96 ASN .
1 97 ASP .
1 98 PRO .
1 99 GLU .
1 100 ALA .
1 101 LEU .
1 102 ALA .
1 103 MET .
1 104 MET .
1 105 ASP .
1 106 ALA .
1 107 LEU .
1 108 LYS .
1 109 GLN .
1 110 LEU .
1 111 MET .
1 112 GLU .
1 113 CYS .
1 114 SER .
1 115 SER .
1 116 ASN .
1 117 VAL .
1 118 ALA .
1 119 ASN .
1 120 ALA .
1 121 SER .
1 122 ASN .
1 123 PRO .
1 124 GLU .
1 125 GLU .
1 126 PHE .
1 127 MET .
1 128 ALA .
1 129 GLY .
1 130 LEU .
1 131 ASP .
1 132 MET .
1 133 LEU .
1 134 ARG .
1 135 SER .
1 136 PRO .
1 137 ASN .
1 138 SER .
1 139 PRO .
1 140 MET .
1 141 GLU .
1 142 PRO .
1 143 PHE .
1 144 MET .
1 145 SER .
1 146 MET .
1 147 ILE .
1 148 MET .
1 149 GLN .
1 150 THR .
1 151 LEU .
1 152 ALA .
1 153 SER .
1 154 LYS .
1 155 GLU .
1 156 VAL .
1 157 MET .
1 158 TYR .
1 159 PRO .
1 160 PRO .
1 161 LEU .
1 162 LYS .
1 163 GLU .
1 164 ILE .
1 165 PHE .
1 166 ASP .
1 167 ASN .
1 168 TYR .
1 169 PRO .
1 170 LYS .
1 171 TYR .
1 172 LEU .
1 173 GLU .
1 174 ASP .
1 175 ASN .
1 176 GLY .
1 177 ALA .
1 178 GLY .
1 179 LEU .
1 180 ASP .
1 181 ALA .
1 182 GLU .
1 183 THR .
1 184 LYS .
1 185 GLU .
1 186 ARG .
1 187 TYR .
1 188 GLU .
1 189 LYS .
1 190 GLN .
1 191 PHE .
1 192 GLU .
1 193 VAL .
1 194 LEU .
1 195 GLY .
1 196 LYS .
1 197 ILE .
1 198 CYS .
1 199 THR .
1 200 GLU .
1 201 PHE .
1 202 GLU .
1 203 LYS .
1 204 GLN .
1 205 PRO .
1 206 GLU .
1 207 LEU .
1 208 ALA .
1 209 GLU .
1 210 VAL .
1 211 GLN .
1 212 PRO .
1 213 VAL .
1 214 ASP .
1 215 ALA .
1 216 ALA .
1 217 THR .
1 218 GLN .
1 219 PRO .
1 220 ALA .
1 221 PRO .
1 222 GLU .
1 223 ALA .
1 224 ASP .
1 225 PRO .
1 226 ALA .
1 227 SER .
1 228 ILE .
1 229 GLU .
1 230 HIS .
1 231 PHE .
1 232 GLU .
1 233 LYS .
1 234 LEU .
1 235 GLY .
1 236 LYS .
1 237 LEU .
1 238 LEU .
1 239 VAL .
1 240 GLU .
1 241 LEU .
1 242 GLN .
1 243 GLN .
1 244 TYR .
1 245 GLY .
1 246 TYR .
1 247 PRO .
1 248 PRO .
1 249 LYS .
1 250 GLU .
1 251 LEU .
1 252 VAL .
1 253 GLY .
1 254 ALA .
1 255 LEU .
1 256 PRO .
1 257 ASP .
1 258 GLY .
1 259 TRP .
1 260 GLN .
1 261 ILE .
1 262 ASP .
1 263 GLU .
1 264 SER .
1 265 GLY .
1 266 LEU .
1 267 PRO .
1 268 LYS .
1 269 VAL .
1 270 ALA .
1 271 ASP .
1 272 ALA .
1 273 ALA .
1 274 ALA .
1 275 ALA .
1 276 THR .
1 277 GLU .
1 278 ALA .
1 279 CYS .
1 280 SER .
1 281 ILE .
1 282 MET .
#
#
loop_
_struct_asym.id
_struct_asym.entity_id
_struct_asym.details
A 1 .
#
#
loop_
_pdbx_poly_seq_scheme.asym_id
_pdbx_poly_seq_scheme.entity_id
_pdbx_poly_seq_scheme.seq_id
_pdbx_poly_seq_scheme.mon_id
_pdbx_poly_seq_scheme.pdb_seq_num
_pdbx_poly_seq_scheme.auth_seq_num
_pdbx_poly_seq_scheme.pdb_mon_id
_pdbx_poly_seq_scheme.auth_mon_id
_pdbx_poly_seq_scheme.pdb_strand_id
_pdbx_poly_seq_scheme.pdb_ins_code
A 1 1 MET 1 ? ? ? B .
A 1 2 THR 2 ? ? ? B .
A 1 3 ASP 3 ? ? ? B .
A 1 4 GLU 4 ? ? ? B .
A 1 5 THR 5 ? ? ? B .
A 1 6 THR 6 ? ? ? B .
A 1 7 GLN 7 ? ? ? B .
A 1 8 ASN 8 ? ? ? B .
A 1 9 ILE 9 ? ? ? B .
A 1 10 LYS 10 ? ? ? B .
A 1 11 ASP 11 ? ? ? B .
A 1 12 LYS 12 ? ? ? B .
A 1 13 THR 13 ? ? ? B .
A 1 14 GLU 14 14 GLU GLU B .
A 1 15 GLU 15 15 GLU GLU B .
A 1 16 GLU 16 16 GLU GLU B .
A 1 17 LEU 17 17 LEU LEU B .
A 1 18 ALA 18 18 ALA ALA B .
A 1 19 ALA 19 19 ALA ALA B .
A 1 20 LEU 20 20 LEU LEU B .
A 1 21 LEU 21 21 LEU LEU B .
A 1 22 ASP 22 22 ASP ASP B .
A 1 23 GLN 23 23 GLN GLN B .
A 1 24 THR 24 24 THR THR B .
A 1 25 LEU 25 25 LEU LEU B .
A 1 26 GLY 26 26 GLY GLY B .
A 1 27 GLU 27 27 GLU GLU B .
A 1 28 PHE 28 28 PHE PHE B .
A 1 29 THR 29 29 THR THR B .
A 1 30 ALA 30 ? ? ? B .
A 1 31 THR 31 ? ? ? B .
A 1 32 PRO 32 ? ? ? B .
A 1 33 ALA 33 ? ? ? B .
A 1 34 PRO 34 ? ? ? B .
A 1 35 LYS 35 ? ? ? B .
A 1 36 PRO 36 ? ? ? B .
A 1 37 ARG 37 ? ? ? B .
A 1 38 THR 38 ? ? ? B .
A 1 39 THR 39 ? ? ? B .
A 1 40 ASP 40 ? ? ? B .
A 1 41 ASP 41 ? ? ? B .
A 1 42 GLU 42 ? ? ? B .
A 1 43 LEU 43 ? ? ? B .
A 1 44 ASP 44 ? ? ? B .
A 1 45 GLU 45 ? ? ? B .
A 1 46 LEU 46 ? ? ? B .
A 1 47 MET 47 ? ? ? B .
A 1 48 ALA 48 ? ? ? B .
A 1 49 SER 49 ? ? ? B .
A 1 50 ALA 50 ? ? ? B .
A 1 51 ASP 51 ? ? ? B .
A 1 52 GLN 52 ? ? ? B .
A 1 53 GLU 53 ? ? ? B .
A 1 54 ALA 54 ? ? ? B .
A 1 55 ALA 55 ? ? ? B .
A 1 56 GLN 56 ? ? ? B .
A 1 57 LYS 57 ? ? ? B .
A 1 58 ALA 58 ? ? ? B .
A 1 59 ALA 59 ? ? ? B .
A 1 60 LYS 60 ? ? ? B .
A 1 61 ASP 61 ? ? ? B .
A 1 62 PHE 62 ? ? ? B .
A 1 63 GLN 63 ? ? ? B .
A 1 64 LYS 64 ? ? ? B .
A 1 65 MET 65 ? ? ? B .
A 1 66 LEU 66 ? ? ? B .
A 1 67 GLU 67 ? ? ? B .
A 1 68 GLN 68 ? ? ? B .
A 1 69 MET 69 ? ? ? B .
A 1 70 VAL 70 ? ? ? B .
A 1 71 THR 71 ? ? ? B .
A 1 72 LEU 72 ? ? ? B .
A 1 73 GLN 73 ? ? ? B .
A 1 74 GLU 74 ? ? ? B .
A 1 75 GLU 75 ? ? ? B .
A 1 76 ALA 76 ? ? ? B .
A 1 77 MET 77 ? ? ? B .
A 1 78 LYS 78 ? ? ? B .
A 1 79 LYS 79 ? ? ? B .
A 1 80 ALA 80 ? ? ? B .
A 1 81 GLY 81 ? ? ? B .
A 1 82 ALA 82 ? ? ? B .
A 1 83 ASP 83 ? ? ? B .
A 1 84 PRO 84 ? ? ? B .
A 1 85 SER 85 ? ? ? B .
A 1 86 GLU 86 ? ? ? B .
A 1 87 GLY 87 ? ? ? B .
A 1 88 GLU 88 ? ? ? B .
A 1 89 GLY 89 ? ? ? B .
A 1 90 GLU 90 ? ? ? B .
A 1 91 GLN 91 ? ? ? B .
A 1 92 PRO 92 ? ? ? B .
A 1 93 LEU 93 ? ? ? B .
A 1 94 ASP 94 ? ? ? B .
A 1 95 PRO 95 ? ? ? B .
A 1 96 ASN 96 ? ? ? B .
A 1 97 ASP 97 ? ? ? B .
A 1 98 PRO 98 ? ? ? B .
A 1 99 GLU 99 ? ? ? B .
A 1 100 ALA 100 ? ? ? B .
A 1 101 LEU 101 ? ? ? B .
A 1 102 ALA 102 ? ? ? B .
A 1 103 MET 103 ? ? ? B .
A 1 104 MET 104 ? ? ? B .
A 1 105 ASP 105 ? ? ? B .
A 1 106 ALA 106 ? ? ? B .
A 1 107 LEU 107 ? ? ? B .
A 1 108 LYS 108 ? ? ? B .
A 1 109 GLN 109 ? ? ? B .
A 1 110 LEU 110 ? ? ? B .
A 1 111 MET 111 ? ? ? B .
A 1 112 GLU 112 ? ? ? B .
A 1 113 CYS 113 ? ? ? B .
A 1 114 SER 114 ? ? ? B .
A 1 115 SER 115 ? ? ? B .
A 1 116 ASN 116 ? ? ? B .
A 1 117 VAL 117 ? ? ? B .
A 1 118 ALA 118 ? ? ? B .
A 1 119 ASN 119 ? ? ? B .
A 1 120 ALA 120 ? ? ? B .
A 1 121 SER 121 ? ? ? B .
A 1 122 ASN 122 ? ? ? B .
A 1 123 PRO 123 ? ? ? B .
A 1 124 GLU 124 ? ? ? B .
A 1 125 GLU 125 ? ? ? B .
A 1 126 PHE 126 ? ? ? B .
A 1 127 MET 127 ? ? ? B .
A 1 128 ALA 128 ? ? ? B .
A 1 129 GLY 129 ? ? ? B .
A 1 130 LEU 130 ? ? ? B .
A 1 131 ASP 131 ? ? ? B .
A 1 132 MET 132 ? ? ? B .
A 1 133 LEU 133 ? ? ? B .
A 1 134 ARG 134 ? ? ? B .
A 1 135 SER 135 ? ? ? B .
A 1 136 PRO 136 ? ? ? B .
A 1 137 ASN 137 ? ? ? B .
A 1 138 SER 138 ? ? ? B .
A 1 139 PRO 139 ? ? ? B .
A 1 140 MET 140 ? ? ? B .
A 1 141 GLU 141 ? ? ? B .
A 1 142 PRO 142 ? ? ? B .
A 1 143 PHE 143 ? ? ? B .
A 1 144 MET 144 ? ? ? B .
A 1 145 SER 145 ? ? ? B .
A 1 146 MET 146 ? ? ? B .
A 1 147 ILE 147 ? ? ? B .
A 1 148 MET 148 ? ? ? B .
A 1 149 GLN 149 ? ? ? B .
A 1 150 THR 150 ? ? ? B .
A 1 151 LEU 151 ? ? ? B .
A 1 152 ALA 152 ? ? ? B .
A 1 153 SER 153 ? ? ? B .
A 1 154 LYS 154 ? ? ? B .
A 1 155 GLU 155 ? ? ? B .
A 1 156 VAL 156 ? ? ? B .
A 1 157 MET 157 ? ? ? B .
A 1 158 TYR 158 ? ? ? B .
A 1 159 PRO 159 ? ? ? B .
A 1 160 PRO 160 ? ? ? B .
A 1 161 LEU 161 ? ? ? B .
A 1 162 LYS 162 ? ? ? B .
A 1 163 GLU 163 ? ? ? B .
A 1 164 ILE 164 ? ? ? B .
A 1 165 PHE 165 ? ? ? B .
A 1 166 ASP 166 ? ? ? B .
A 1 167 ASN 167 ? ? ? B .
A 1 168 TYR 168 ? ? ? B .
A 1 169 PRO 169 ? ? ? B .
A 1 170 LYS 170 ? ? ? B .
A 1 171 TYR 171 ? ? ? B .
A 1 172 LEU 172 ? ? ? B .
A 1 173 GLU 173 ? ? ? B .
A 1 174 ASP 174 ? ? ? B .
A 1 175 ASN 175 ? ? ? B .
A 1 176 GLY 176 ? ? ? B .
A 1 177 ALA 177 ? ? ? B .
A 1 178 GLY 178 ? ? ? B .
A 1 179 LEU 179 ? ? ? B .
A 1 180 ASP 180 ? ? ? B .
A 1 181 ALA 181 ? ? ? B .
A 1 182 GLU 182 ? ? ? B .
A 1 183 THR 183 ? ? ? B .
A 1 184 LYS 184 ? ? ? B .
A 1 185 GLU 185 ? ? ? B .
A 1 186 ARG 186 ? ? ? B .
A 1 187 TYR 187 ? ? ? B .
A 1 188 GLU 188 ? ? ? B .
A 1 189 LYS 189 ? ? ? B .
A 1 190 GLN 190 ? ? ? B .
A 1 191 PHE 191 ? ? ? B .
A 1 192 GLU 192 ? ? ? B .
A 1 193 VAL 193 ? ? ? B .
A 1 194 LEU 194 ? ? ? B .
A 1 195 GLY 195 ? ? ? B .
A 1 196 LYS 196 ? ? ? B .
A 1 197 ILE 197 ? ? ? B .
A 1 198 CYS 198 ? ? ? B .
A 1 199 THR 199 ? ? ? B .
A 1 200 GLU 200 ? ? ? B .
A 1 201 PHE 201 ? ? ? B .
A 1 202 GLU 202 ? ? ? B .
A 1 203 LYS 203 ? ? ? B .
A 1 204 GLN 204 ? ? ? B .
A 1 205 PRO 205 ? ? ? B .
A 1 206 GLU 206 ? ? ? B .
A 1 207 LEU 207 ? ? ? B .
A 1 208 ALA 208 ? ? ? B .
A 1 209 GLU 209 ? ? ? B .
A 1 210 VAL 210 ? ? ? B .
A 1 211 GLN 211 ? ? ? B .
A 1 212 PRO 212 ? ? ? B .
A 1 213 VAL 213 ? ? ? B .
A 1 214 ASP 214 ? ? ? B .
A 1 215 ALA 215 ? ? ? B .
A 1 216 ALA 216 ? ? ? B .
A 1 217 THR 217 ? ? ? B .
A 1 218 GLN 218 ? ? ? B .
A 1 219 PRO 219 ? ? ? B .
A 1 220 ALA 220 ? ? ? B .
A 1 221 PRO 221 ? ? ? B .
A 1 222 GLU 222 ? ? ? B .
A 1 223 ALA 223 ? ? ? B .
A 1 224 ASP 224 ? ? ? B .
A 1 225 PRO 225 ? ? ? B .
A 1 226 ALA 226 ? ? ? B .
A 1 227 SER 227 ? ? ? B .
A 1 228 ILE 228 ? ? ? B .
A 1 229 GLU 229 ? ? ? B .
A 1 230 HIS 230 ? ? ? B .
A 1 231 PHE 231 ? ? ? B .
A 1 232 GLU 232 ? ? ? B .
A 1 233 LYS 233 ? ? ? B .
A 1 234 LEU 234 ? ? ? B .
A 1 235 GLY 235 ? ? ? B .
A 1 236 LYS 236 ? ? ? B .
A 1 237 LEU 237 ? ? ? B .
A 1 238 LEU 238 ? ? ? B .
A 1 239 VAL 239 ? ? ? B .
A 1 240 GLU 240 ? ? ? B .
A 1 241 LEU 241 ? ? ? B .
A 1 242 GLN 242 ? ? ? B .
A 1 243 GLN 243 ? ? ? B .
A 1 244 TYR 244 ? ? ? B .
A 1 245 GLY 245 ? ? ? B .
A 1 246 TYR 246 ? ? ? B .
A 1 247 PRO 247 ? ? ? B .
A 1 248 PRO 248 ? ? ? B .
A 1 249 LYS 249 ? ? ? B .
A 1 250 GLU 250 ? ? ? B .
A 1 251 LEU 251 ? ? ? B .
A 1 252 VAL 252 ? ? ? B .
A 1 253 GLY 253 ? ? ? B .
A 1 254 ALA 254 ? ? ? B .
A 1 255 LEU 255 ? ? ? B .
A 1 256 PRO 256 ? ? ? B .
A 1 257 ASP 257 ? ? ? B .
A 1 258 GLY 258 ? ? ? B .
A 1 259 TRP 259 ? ? ? B .
A 1 260 GLN 260 ? ? ? B .
A 1 261 ILE 261 ? ? ? B .
A 1 262 ASP 262 ? ? ? B .
A 1 263 GLU 263 ? ? ? B .
A 1 264 SER 264 ? ? ? B .
A 1 265 GLY 265 ? ? ? B .
A 1 266 LEU 266 ? ? ? B .
A 1 267 PRO 267 ? ? ? B .
A 1 268 LYS 268 ? ? ? B .
A 1 269 VAL 269 ? ? ? B .
A 1 270 ALA 270 ? ? ? B .
A 1 271 ASP 271 ? ? ? B .
A 1 272 ALA 272 ? ? ? B .
A 1 273 ALA 273 ? ? ? B .
A 1 274 ALA 274 ? ? ? B .
A 1 275 ALA 275 ? ? ? B .
A 1 276 THR 276 ? ? ? B .
A 1 277 GLU 277 ? ? ? B .
A 1 278 ALA 278 ? ? ? B .
A 1 279 CYS 279 ? ? ? B .
A 1 280 SER 280 ? ? ? B .
A 1 281 ILE 281 ? ? ? B .
A 1 282 MET 282 ? ? ? B .
#
#
loop_
_ma_data.id
_ma_data.name
_ma_data.content_type
_ma_data.content_type_other_details
1
'Peroxisomal biogenesis factor 19 {PDB ID=3mk4, label_asym_id=B, auth_asym_id=B, SMTL ID=3mk4.1.B}'
'template structure' .
2 . target .
3 'Target-template alignment by HHblits to 3mk4, label_asym_id=B'
'target-template alignment' .
4 'model 2' 'model coordinates' .
5 SMTL 'reference database' .
6 PDB 'reference database' .
7 'Template search output' other 'Results of the sequence search'
#
#
loop_
_ma_data_group.ordinal_id
_ma_data_group.group_id
_ma_data_group.data_id
1 1 2
2 1 5
3 1 6
4 2 7
5 3 2
6 3 1
7 3 3
8 4 1
9 4 3
10 5 4
#
#
loop_
_ma_data_ref_db.data_id
_ma_data_ref_db.name
_ma_data_ref_db.location_url
_ma_data_ref_db.version
_ma_data_ref_db.release_date
5 SMTL https://swissmodel.expasy.org/templates/ . 2025-02-12
6 PDB https://www.wwpdb.org . 2025-02-07
#
#
loop_
_ma_target_entity.entity_id
_ma_target_entity.data_id
_ma_target_entity.origin
1 2 'reference database'
#
#
loop_
_ma_target_entity_instance.asym_id
_ma_target_entity_instance.entity_id
_ma_target_entity_instance.details
A 1 .
#
#
loop_
_ma_template_trans_matrix.id
_ma_template_trans_matrix.rot_matrix[1][1]
_ma_template_trans_matrix.rot_matrix[2][1]
_ma_template_trans_matrix.rot_matrix[3][1]
_ma_template_trans_matrix.rot_matrix[1][2]
_ma_template_trans_matrix.rot_matrix[2][2]
_ma_template_trans_matrix.rot_matrix[3][2]
_ma_template_trans_matrix.rot_matrix[1][3]
_ma_template_trans_matrix.rot_matrix[2][3]
_ma_template_trans_matrix.rot_matrix[3][3]
_ma_template_trans_matrix.tr_vector[1]
_ma_template_trans_matrix.tr_vector[2]
_ma_template_trans_matrix.tr_vector[3]
1 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000
1.000000 0 0 0
#
#
loop_
_ma_template_details.ordinal_id
_ma_template_details.template_id
_ma_template_details.template_origin
_ma_template_details.template_entity_type
_ma_template_details.template_trans_matrix_id
_ma_template_details.template_data_id
_ma_template_details.target_asym_id
_ma_template_details.template_label_asym_id
_ma_template_details.template_label_entity_id
_ma_template_details.template_model_num
_ma_template_details.template_auth_asym_id
1 1 'reference database' polymer 1 1 A B 2 1 B
#
#
loop_
_ma_template_poly.template_id
_ma_template_poly.seq_one_letter_code
_ma_template_poly.seq_one_letter_code_can
1 ADRELEELLESALDDFDKAK ADRELEELLESALDDFDKAK
#
#
loop_
_ma_template_poly_segment.id
_ma_template_poly_segment.template_id
_ma_template_poly_segment.residue_number_begin
_ma_template_poly_segment.residue_number_end
1 1 2 19
#
#
loop_
_ma_template_ref_db_details.template_id
_ma_template_ref_db_details.db_name
_ma_template_ref_db_details.db_name_other_details
_ma_template_ref_db_details.db_accession_code
_ma_template_ref_db_details.db_version_date
1 PDB . 3mk4 2024-04-03
#
#
loop_
_ma_target_template_poly_mapping.id
_ma_target_template_poly_mapping.template_segment_id
_ma_target_template_poly_mapping.target_asym_id
_ma_target_template_poly_mapping.target_seq_id_begin
_ma_target_template_poly_mapping.target_seq_id_end
1 1 A 1 282
#
#
loop_
_ma_alignment_info.alignment_id
_ma_alignment_info.data_id
_ma_alignment_info.software_group_id
_ma_alignment_info.alignment_length
_ma_alignment_info.alignment_type
_ma_alignment_info.alignment_mode
1 3 1 282 'target-template pairwise alignment' local
#
#
loop_
_ma_alignment_details.ordinal_id
_ma_alignment_details.alignment_id
_ma_alignment_details.template_segment_id
_ma_alignment_details.target_asym_id
_ma_alignment_details.score_type
_ma_alignment_details.score_type_other_details
_ma_alignment_details.score_value
_ma_alignment_details.percent_sequence_identity
_ma_alignment_details.sequence_identity_denominator
_ma_alignment_details.sequence_identity_denominator_other_details
1 1 1 A 'HHblits e-value' . 1.3e-06 33.333
'Number of aligned residue pairs (not including the gaps)' .
#
#
loop_
_ma_alignment.ordinal_id
_ma_alignment.alignment_id
_ma_alignment.target_template_flag
_ma_alignment.sequence
1 1 1
MTDETTQNIKDKTEEELAALLDQTLGEFTATPAPKPRTTDDELDELMASADQEAAQKAAKDFQKMLEQMVTLQEEAMKKAGADPSEGEGEQPLDPNDPEALAMMDALKQLMECSSNVANASNPEEFMAGLDMLRSPNSPMEPFMSMIMQTLASKEVMYPPLKEIFDNYPKYLEDNGAGLDAETKERYEKQFEVLGKICTEFEKQPELAEVQPVDAATQPAPEADPASIEHFEKLGKLLVELQQYGYPPKELVGALPDGWQIDESGLPKVADAAAATEACSIM
2 1 2
-------------DRELEELLESALDDFDKA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
#
#
loop_
_ma_protocol_step.ordinal_id
_ma_protocol_step.protocol_id
_ma_protocol_step.step_id
_ma_protocol_step.method_type
_ma_protocol_step.step_name
_ma_protocol_step.details
_ma_protocol_step.software_group_id
_ma_protocol_step.input_data_group_id
_ma_protocol_step.output_data_group_id
1 1 1 'template search' 'template search' 'SWISS-MODEL template search in PDB' 2
1 2
2 1 2 'template selection' 'template selection'
'Automatic template selection by SWISS-MODEL {QSQE=0.000}' 3 2 4
3 1 3 modeling 'homology modeling'
'SWISS-MODEL auto-model mode using ProMod3 on 3mk4.1' 4 3 5
#
#
loop_
_ma_model_list.ordinal_id
_ma_model_list.model_id
_ma_model_list.model_group_id
_ma_model_list.model_name
_ma_model_list.model_group_name
_ma_model_list.data_id
_ma_model_list.model_type
_ma_model_list.model_type_other_details
1 1 1 'model 2' . 4 'Homology model' .
#
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_alt_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.auth_seq_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.label_entity_id
_atom_site.auth_asym_id
_atom_site.auth_comp_id
_atom_site.B_iso_or_equiv
_atom_site.pdbx_PDB_model_num
ATOM 1 N N . GLU 14 14 ? A 35.686 -20.172 11.794 1 1 B GLU 0.500 1
ATOM 2 C CA . GLU 14 14 ? A 35.127 -18.815 11.490 1 1 B GLU 0.500 1
ATOM 3 C C . GLU 14 14 ? A 36.121 -17.709 11.816 1 1 B GLU 0.500 1
ATOM 4 O O . GLU 14 14 ? A 36.310 -17.369 12.974 1 1 B GLU 0.500 1
ATOM 5 C CB . GLU 14 14 ? A 33.820 -18.674 12.287 1 1 B GLU 0.500 1
ATOM 6 C CG . GLU 14 14 ? A 32.979 -17.424 11.943 1 1 B GLU 0.500 1
ATOM 7 C CD . GLU 14 14 ? A 31.595 -17.536 12.590 1 1 B GLU 0.500 1
ATOM 8 O OE1 . GLU 14 14 ? A 30.849 -16.537 12.526 1 1 B GLU 0.500 1
ATOM 9 O OE2 . GLU 14 14 ? A 31.305 -18.623 13.153 1 1 B GLU 0.500 1
ATOM 10 N N . GLU 15 15 ? A 36.845 -17.178 10.800 1 1 B GLU 0.530 1
ATOM 11 C CA . GLU 15 15 ? A 37.903 -16.199 10.998 1 1 B GLU 0.530 1
ATOM 12 C C . GLU 15 15 ? A 37.437 -14.860 11.537 1 1 B GLU 0.530 1
ATOM 13 O O . GLU 15 15 ? A 38.042 -14.296 12.446 1 1 B GLU 0.530 1
ATOM 14 C CB . GLU 15 15 ? A 38.610 -15.972 9.660 1 1 B GLU 0.530 1
ATOM 15 C CG . GLU 15 15 ? A 39.781 -14.967 9.732 1 1 B GLU 0.530 1
ATOM 16 C CD . GLU 15 15 ? A 40.408 -14.758 8.358 1 1 B GLU 0.530 1
ATOM 17 O OE1 . GLU 15 15 ? A 41.352 -13.935 8.281 1 1 B GLU 0.530 1
ATOM 18 O OE2 . GLU 15 15 ? A 39.938 -15.410 7.390 1 1 B GLU 0.530 1
ATOM 19 N N . GLU 16 16 ? A 36.304 -14.350 11.012 1 1 B GLU 0.560 1
ATOM 20 C CA . GLU 16 16 ? A 35.681 -13.119 11.455 1 1 B GLU 0.560 1
ATOM 21 C C . GLU 16 16 ? A 35.329 -13.136 12.940 1 1 B GLU 0.560 1
ATOM 22 O O . GLU 16 16 ? A 35.705 -12.233 13.685 1 1 B GLU 0.560 1
ATOM 23 C CB . GLU 16 16 ? A 34.415 -12.889 10.607 1 1 B GLU 0.560 1
ATOM 24 C CG . GLU 16 16 ? A 33.690 -11.559 10.909 1 1 B GLU 0.560 1
ATOM 25 C CD . GLU 16 16 ? A 32.450 -11.351 10.039 1 1 B GLU 0.560 1
ATOM 26 O OE1 . GLU 16 16 ? A 31.867 -10.242 10.153 1 1 B GLU 0.560 1
ATOM 27 O OE2 . GLU 16 16 ? A 32.094 -12.269 9.259 1 1 B GLU 0.560 1
ATOM 28 N N . LEU 17 17 ? A 34.685 -14.226 13.425 1 1 B LEU 0.570 1
ATOM 29 C CA . LEU 17 17 ? A 34.402 -14.425 14.835 1 1 B LEU 0.570 1
ATOM 30 C C . LEU 17 17 ? A 35.657 -14.525 15.680 1 1 B LEU 0.570 1
ATOM 31 O O . LEU 17 17 ? A 35.748 -13.875 16.716 1 1 B LEU 0.570 1
ATOM 32 C CB . LEU 17 17 ? A 33.548 -15.695 15.043 1 1 B LEU 0.570 1
ATOM 33 C CG . LEU 17 17 ? A 33.093 -15.994 16.485 1 1 B LEU 0.570 1
ATOM 34 C CD1 . LEU 17 17 ? A 32.167 -14.885 17.012 1 1 B LEU 0.570 1
ATOM 35 C CD2 . LEU 17 17 ? A 32.383 -17.357 16.507 1 1 B LEU 0.570 1
ATOM 36 N N . ALA 18 18 ? A 36.686 -15.289 15.248 1 1 B ALA 0.640 1
ATOM 37 C CA . ALA 18 18 ? A 37.940 -15.390 15.976 1 1 B ALA 0.640 1
ATOM 38 C C . ALA 18 18 ? A 38.633 -14.026 16.129 1 1 B ALA 0.640 1
ATOM 39 O O . ALA 18 18 ? A 38.945 -13.610 17.237 1 1 B ALA 0.640 1
ATOM 40 C CB . ALA 18 18 ? A 38.838 -16.461 15.305 1 1 B ALA 0.640 1
ATOM 41 N N . ALA 19 19 ? A 38.741 -13.234 15.034 1 1 B ALA 0.640 1
ATOM 42 C CA . ALA 19 19 ? A 39.268 -11.880 15.066 1 1 B ALA 0.640 1
ATOM 43 C C . ALA 19 19 ? A 38.476 -10.941 15.969 1 1 B ALA 0.640 1
ATOM 44 O O . ALA 19 19 ? A 39.041 -10.124 16.693 1 1 B ALA 0.640 1
ATOM 45 C CB . ALA 19 19 ? A 39.224 -11.257 13.654 1 1 B ALA 0.640 1
ATOM 46 N N . LEU 20 20 ? A 37.127 -11.051 15.927 1 1 B LEU 0.590 1
ATOM 47 C CA . LEU 20 20 ? A 36.229 -10.336 16.817 1 1 B LEU 0.590 1
ATOM 48 C C . LEU 20 20 ? A 36.465 -10.694 18.286 1 1 B LEU 0.590 1
ATOM 49 O O . LEU 20 20 ? A 36.669 -9.809 19.115 1 1 B LEU 0.590 1
ATOM 50 C CB . LEU 20 20 ? A 34.745 -10.619 16.430 1 1 B LEU 0.590 1
ATOM 51 C CG . LEU 20 20 ? A 33.666 -9.833 17.213 1 1 B LEU 0.590 1
ATOM 52 C CD1 . LEU 20 20 ? A 33.760 -8.317 16.964 1 1 B LEU 0.590 1
ATOM 53 C CD2 . LEU 20 20 ? A 32.253 -10.355 16.875 1 1 B LEU 0.590 1
ATOM 54 N N . LEU 21 21 ? A 36.507 -11.998 18.640 1 1 B LEU 0.580 1
ATOM 55 C CA . LEU 21 21 ? A 36.752 -12.459 19.999 1 1 B LEU 0.580 1
ATOM 56 C C . LEU 21 21 ? A 38.124 -12.125 20.572 1 1 B LEU 0.580 1
ATOM 57 O O . LEU 21 21 ? A 38.222 -11.735 21.735 1 1 B LEU 0.580 1
ATOM 58 C CB . LEU 21 21 ? A 36.413 -13.958 20.170 1 1 B LEU 0.580 1
ATOM 59 C CG . LEU 21 21 ? A 34.937 -14.316 19.868 1 1 B LEU 0.580 1
ATOM 60 C CD1 . LEU 21 21 ? A 34.735 -15.829 20.040 1 1 B LEU 0.580 1
ATOM 61 C CD2 . LEU 21 21 ? A 33.900 -13.510 20.682 1 1 B LEU 0.580 1
ATOM 62 N N . ASP 22 22 ? A 39.214 -12.225 19.786 1 1 B ASP 0.570 1
ATOM 63 C CA . ASP 22 22 ? A 40.543 -11.838 20.225 1 1 B ASP 0.570 1
ATOM 64 C C . ASP 22 22 ? A 40.677 -10.354 20.579 1 1 B ASP 0.570 1
ATOM 65 O O . ASP 22 22 ? A 41.246 -9.980 21.608 1 1 B ASP 0.570 1
ATOM 66 C CB . ASP 22 22 ? A 41.552 -12.173 19.098 1 1 B ASP 0.570 1
ATOM 67 C CG . ASP 22 22 ? A 41.784 -13.669 18.934 1 1 B ASP 0.570 1
ATOM 68 O OD1 . ASP 22 22 ? A 41.358 -14.461 19.810 1 1 B ASP 0.570 1
ATOM 69 O OD2 . ASP 22 22 ? A 42.447 -14.016 17.922 1 1 B ASP 0.570 1
ATOM 70 N N . GLN 23 23 ? A 40.128 -9.453 19.737 1 1 B GLN 0.560 1
ATOM 71 C CA . GLN 23 23 ? A 40.122 -8.026 20.001 1 1 B GLN 0.560 1
ATOM 72 C C . GLN 23 23 ? A 39.230 -7.616 21.177 1 1 B GLN 0.560 1
ATOM 73 O O . GLN 23 23 ? A 39.665 -6.861 22.042 1 1 B GLN 0.560 1
ATOM 74 C CB . GLN 23 23 ? A 39.845 -7.216 18.707 1 1 B GLN 0.560 1
ATOM 75 C CG . GLN 23 23 ? A 40.903 -7.451 17.590 1 1 B GLN 0.560 1
ATOM 76 C CD . GLN 23 23 ? A 42.311 -7.063 18.042 1 1 B GLN 0.560 1
ATOM 77 O OE1 . GLN 23 23 ? A 42.538 -5.951 18.542 1 1 B GLN 0.560 1
ATOM 78 N NE2 . GLN 23 23 ? A 43.308 -7.955 17.871 1 1 B GLN 0.560 1
ATOM 79 N N . THR 24 24 ? A 37.996 -8.168 21.303 1 1 B THR 0.590 1
ATOM 80 C CA . THR 24 24 ? A 37.079 -7.859 22.410 1 1 B THR 0.590 1
ATOM 81 C C . THR 24 24 ? A 37.610 -8.349 23.739 1 1 B THR 0.590 1
ATOM 82 O O . THR 24 24 ? A 37.340 -7.778 24.790 1 1 B THR 0.590 1
ATOM 83 C CB . THR 24 24 ? A 35.665 -8.407 22.262 1 1 B THR 0.590 1
ATOM 84 O OG1 . THR 24 24 ? A 35.649 -9.815 22.049 1 1 B THR 0.590 1
ATOM 85 C CG2 . THR 24 24 ? A 34.987 -7.760 21.050 1 1 B THR 0.590 1
ATOM 86 N N . LEU 25 25 ? A 38.445 -9.409 23.731 1 1 B LEU 0.560 1
ATOM 87 C CA . LEU 25 25 ? A 39.159 -9.849 24.912 1 1 B LEU 0.560 1
ATOM 88 C C . LEU 25 25 ? A 40.102 -8.781 25.467 1 1 B LEU 0.560 1
ATOM 89 O O . LEU 25 25 ? A 40.242 -8.611 26.680 1 1 B LEU 0.560 1
ATOM 90 C CB . LEU 25 25 ? A 39.883 -11.186 24.647 1 1 B LEU 0.560 1
ATOM 91 C CG . LEU 25 25 ? A 40.377 -11.908 25.918 1 1 B LEU 0.560 1
ATOM 92 C CD1 . LEU 25 25 ? A 39.214 -12.371 26.820 1 1 B LEU 0.560 1
ATOM 93 C CD2 . LEU 25 25 ? A 41.277 -13.090 25.524 1 1 B LEU 0.560 1
ATOM 94 N N . GLY 26 26 ? A 40.724 -7.981 24.579 1 1 B GLY 0.570 1
ATOM 95 C CA . GLY 26 26 ? A 41.549 -6.836 24.948 1 1 B GLY 0.570 1
ATOM 96 C C . GLY 26 26 ? A 40.787 -5.611 25.406 1 1 B GLY 0.570 1
ATOM 97 O O . GLY 26 26 ? A 41.386 -4.706 25.972 1 1 B GLY 0.570 1
ATOM 98 N N . GLU 27 27 ? A 39.449 -5.576 25.215 1 1 B GLU 0.540 1
ATOM 99 C CA . GLU 27 27 ? A 38.586 -4.486 25.649 1 1 B GLU 0.540 1
ATOM 100 C C . GLU 27 27 ? A 38.156 -4.591 27.112 1 1 B GLU 0.540 1
ATOM 101 O O . GLU 27 27 ? A 37.533 -3.673 27.646 1 1 B GLU 0.540 1
ATOM 102 C CB . GLU 27 27 ? A 37.321 -4.389 24.768 1 1 B GLU 0.540 1
ATOM 103 C CG . GLU 27 27 ? A 37.607 -3.950 23.311 1 1 B GLU 0.540 1
ATOM 104 C CD . GLU 27 27 ? A 36.338 -3.894 22.463 1 1 B GLU 0.540 1
ATOM 105 O OE1 . GLU 27 27 ? A 35.260 -4.324 22.949 1 1 B GLU 0.540 1
ATOM 106 O OE2 . GLU 27 27 ? A 36.449 -3.431 21.299 1 1 B GLU 0.540 1
ATOM 107 N N . PHE 28 28 ? A 38.522 -5.685 27.820 1 1 B PHE 0.650 1
ATOM 108 C CA . PHE 28 28 ? A 38.336 -5.809 29.263 1 1 B PHE 0.650 1
ATOM 109 C C . PHE 28 28 ? A 39.482 -5.174 30.059 1 1 B PHE 0.650 1
ATOM 110 O O . PHE 28 28 ? A 39.466 -5.219 31.289 1 1 B PHE 0.650 1
ATOM 111 C CB . PHE 28 28 ? A 38.269 -7.297 29.715 1 1 B PHE 0.650 1
ATOM 112 C CG . PHE 28 28 ? A 37.005 -7.972 29.277 1 1 B PHE 0.650 1
ATOM 113 C CD1 . PHE 28 28 ? A 35.856 -7.922 30.080 1 1 B PHE 0.650 1
ATOM 114 C CD2 . PHE 28 28 ? A 36.955 -8.688 28.075 1 1 B PHE 0.650 1
ATOM 115 C CE1 . PHE 28 28 ? A 34.684 -8.584 29.695 1 1 B PHE 0.650 1
ATOM 116 C CE2 . PHE 28 28 ? A 35.786 -9.347 27.680 1 1 B PHE 0.650 1
ATOM 117 C CZ . PHE 28 28 ? A 34.650 -9.301 28.494 1 1 B PHE 0.650 1
ATOM 118 N N . THR 29 29 ? A 40.481 -4.590 29.362 1 1 B THR 0.630 1
ATOM 119 C CA . THR 29 29 ? A 41.551 -3.742 29.900 1 1 B THR 0.630 1
ATOM 120 C C . THR 29 29 ? A 41.011 -2.343 30.317 1 1 B THR 0.630 1
ATOM 121 O O . THR 29 29 ? A 39.941 -1.921 29.820 1 1 B THR 0.630 1
ATOM 122 C CB . THR 29 29 ? A 42.663 -3.565 28.855 1 1 B THR 0.630 1
ATOM 123 O OG1 . THR 29 29 ? A 43.234 -4.822 28.494 1 1 B THR 0.630 1
ATOM 124 C CG2 . THR 29 29 ? A 43.879 -2.706 29.250 1 1 B THR 0.630 1
ATOM 125 O OXT . THR 29 29 ? A 41.695 -1.693 31.156 1 1 B THR 0.630 1
#
#
loop_
_atom_type.symbol
C
N
O
#
#
loop_
_ma_qa_metric.id
_ma_qa_metric.name
_ma_qa_metric.description
_ma_qa_metric.type
_ma_qa_metric.mode
_ma_qa_metric.type_other_details
_ma_qa_metric.software_group_id
1 QMEANDisCo 'Predicted accuracy according to all-atom lDDT in [0,1].'
'pLDDT all-atom in [0,1]' local . 5
2 QMEANDisCo 'Predicted accuracy according to all-atom lDDT in [0,1].'
'pLDDT all-atom in [0,1]' global . 5
3 GMQE
'Global Model Quality Estimate of the model accuracy, calculated by SWISS-MODEL.'
'normalized score' global . 6
#
#
loop_
_ma_qa_metric_global.ordinal_id
_ma_qa_metric_global.model_id
_ma_qa_metric_global.metric_id
_ma_qa_metric_global.metric_value
1 1 2 0.580
2 1 3 0.007
#
#
loop_
_ma_qa_metric_local.ordinal_id
_ma_qa_metric_local.model_id
_ma_qa_metric_local.label_asym_id
_ma_qa_metric_local.label_seq_id
_ma_qa_metric_local.label_comp_id
_ma_qa_metric_local.metric_id
_ma_qa_metric_local.metric_value
1 1 A 14 GLU 1 0.500
2 1 A 15 GLU 1 0.530
3 1 A 16 GLU 1 0.560
4 1 A 17 LEU 1 0.570
5 1 A 18 ALA 1 0.640
6 1 A 19 ALA 1 0.640
7 1 A 20 LEU 1 0.590
8 1 A 21 LEU 1 0.580
9 1 A 22 ASP 1 0.570
10 1 A 23 GLN 1 0.560
11 1 A 24 THR 1 0.590
12 1 A 25 LEU 1 0.560
13 1 A 26 GLY 1 0.570
14 1 A 27 GLU 1 0.540
15 1 A 28 PHE 1 0.650
16 1 A 29 THR 1 0.630
#
#
loop_
_pdbx_data_usage.id
_pdbx_data_usage.type
_pdbx_data_usage.details
_pdbx_data_usage.url
1 license
;This SWISS-MODEL protein model is copyright.
It is produced by the SWISS-MODEL server, developed by the Computational
Structural Biology Group at the SIB Swiss Institute of Bioinformatics at the
Biozentrum, University of Basel (https://swissmodel.expasy.org). This
model is licensed under the CC BY-SA 4.0 Creative Commons
Attribution-ShareAlike 4.0 International License
(https://creativecommons.org/licenses/by-sa/4.0/legalcode), i.e. you
can copy and redistribute the model in any medium or format,
transform and build upon the model for any purpose, even
commercially, under the following terms:
Attribution - You must give appropriate credit, provide a link to
the license, and indicate if changes were made. You may do so in any
reasonable manner, but not in any way that suggests the licensor
endorses you or your use. When you publish, patent or distribute
results that were fully or partially based on the model, please cite
the corresponding papers mentioned under JRNL.
ShareAlike - If you remix, transform, or build upon the material,
you must distribute your contributions under the same license as the
original.
No additional restrictions - you may not apply legal terms or
technological measures that legally restrict others from doing
anything the license permits.
Find a human-readable summary of (and not a substitute for) the
CC BY-SA 4.0 license at this link:
https://creativecommons.org/licenses/by-sa/4.0/
;
https://creativecommons.org/licenses/by-sa/4.0/legalcode
2 disclaimer
;The SWISS-MODEL SERVER produces theoretical models for
proteins. The results of any theoretical modelling procedure is
NON-EXPERIMENTAL and MUST be considered with care. These models may
contain significant errors. This is especially true for automated
modeling since there is no human intervention during model
building. Please read the header section and the logfile carefully
to know what templates and alignments were used during the model
building process. All information by the SWISS-MODEL SERVER is
provided "AS-IS", without any warranty, expressed or implied.
;
https://swissmodel.expasy.org/docs/terms_of_use#disclaimer
#