data_SMR-ad9a94628d6c8fe66ea840b91f7f24d3_4 _entry.id SMR-ad9a94628d6c8fe66ea840b91f7f24d3_4 _struct.entry_id SMR-ad9a94628d6c8fe66ea840b91f7f24d3_4 _struct.pdbx_model_details ;This model was generated unsupervised by the SWISS-MODEL homology-modelling pipeline for the SWISS-MODEL Repository, a database of annotated 3D protein structure models. The modelled monomer covers following UniProtKB entries: - Q9JJK1/ GPM6B_RAT, Neuronal membrane glycoprotein M6-b Estimated model accuracy of this model is 0.008, calculated by SWISS-MODEL as Global Model Quality Estimate (GMQE). ; _struct.pdbx_structure_determination_methodology computational _struct.title 'Model for UniProtKB entries Q9JJK1' _audit_conform.dict_location https://raw.githubusercontent.com/ihmwg/ModelCIF/d18ba38/base/mmcif_ma-core.dic _audit_conform.dict_name mmcif_ma.dic _audit_conform.dict_version 1.4.6 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary 'The SWISS-MODEL Repository - new features and functionality' 'Nucleic Acids Res.' 45 D313 D319 2017 27899672 10.1093/nar/gkw1132 2 'SWISS-MODEL: homology modelling of protein structures and complexes' 'Nucleic Acids Res.' 46 W296 W303 2018 29788355 10.1093/nar/gky427 3 'ProMod3 - A versatile homology modelling toolbox' 'PLoS Comput. Biol.' 17(1) 1 18 2021 33507980 10.1371/journal.pcbi.1008667 4 'QMEANDisCo - distance constraints applied on model quality estimation' Bioinformatics 36 1765 1771 2020 31697312 10.1093/bioinformatics/btz828 5 'OpenStructure: an integrated software framework for computational structural biology' 'Acta Crystallogr., Sect. D: Biol. Crystallogr.' 69 701 709 2013 23633579 10.1107/S0907444913007051 6 'BLAST+: architecture and applications' 'BMC Bioinf.' 10 421 . 2009 20003500 10.1186/1471-2105-10-421 7 'HH-suite3 for fast remote homology detection and deep protein annotation' 'BMC Bioinf.' 20 473 . 2019 31521110 10.1186/s12859-019-3019-7 # # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Bienert, S.' 1 primary 'Waterhouse, A.' 2 primary 'de Beer, T.A.P.' 3 primary 'Tauriello, G.' 4 primary 'Studer, G.' 5 primary 'Bordoli, L.' 6 primary 'Schwede, T.' 7 2 'Waterhouse, A.' 8 2 'Bertoni, M.' 9 2 'Bienert, S.' 10 2 'Studer, G.' 11 2 'Tauriello, G.' 12 2 'Gumienny, R.' 13 2 'Heer, F.T.' 14 2 'de Beer, T.A.P.' 15 2 'Rempfer, C.' 16 2 'Bordoli, L.' 17 2 'Lepore, R.' 18 2 'Schwede, T.' 19 3 'Studer, G.' 20 3 'Tauriello, G.' 21 3 'Bienert, S.' 22 3 'Biasini, M.' 23 3 'Johner, N.' 24 3 'Schwede, T.' 25 4 'Studer, G.' 26 4 'Rempfer, C.' 27 4 'Waterhouse, A.M.' 28 4 'Gumienny, R.' 29 4 'Haas, J.' 30 4 'Schwede, T.' 31 5 'Biasini, M.' 32 5 'Schmidt, T.' 33 5 'Bienert, S.' 34 5 'Mariani, V.' 35 5 'Studer, G.' 36 5 'Haas, J.' 37 5 'Johner, N.' 38 5 'Schenk, A.D.' 39 5 'Philippsen, A.' 40 5 'Schwede, T.' 41 6 'Camacho, C.' 42 6 'Coulouris, G.' 43 6 'Avagyan, V.' 44 6 'Ma, N.' 45 6 'Papadopoulos, J.' 46 6 'Bealer, K.' 47 6 'Madden, T.L.' 48 7 'Steinegger, M.' 49 7 'Meier, M.' 50 7 'Mirdita, M.' 51 7 'Vohringer, H.' 52 7 'Haunsberger, S.J.' 53 7 'Soding, J.' 54 # # loop_ _software.pdbx_ordinal _software.name _software.classification _software.description _software.version _software.type _software.location _software.citation_id 1 SWISS-MODEL 'model building' 'Homology modelling web service' 2512d1755cebc94443edf017bed62a02253bd792 package https://swissmodel.expasy.org 2 2 ProMod3 'model building' 'Modular homology modelling engine' 3.4.1 library https://git.scicore.unibas.ch/schwede/ProMod3 3 3 QMEAN 'model building' 'QMEAN - Qualitative Model Energy ANalysis' 4.3.1 library https://git.scicore.unibas.ch/schwede/QMEAN 4 4 OpenStructure 'data processing' 'Open-Source Computational Structural Biology Framework' 2.8.0 package https://openstructure.org/ 5 5 BLAST 'data collection' . 2.2.31 package https://blast.ncbi.nlm.nih.gov 6 6 HH-suite 'data collection' 'HH-suite3 for sensitive sequence searching' 3.2.0 package https://github.com/soedinglab/hh-suite 7 # # loop_ _ma_software_group.ordinal_id _ma_software_group.group_id _ma_software_group.software_id _ma_software_group.parameter_group_id 1 1 6 . 2 2 1 . 3 2 4 . 4 2 5 . 5 2 6 . 6 3 1 . 7 3 4 . 8 4 1 . 9 4 2 . 10 4 4 . 11 5 3 . 12 6 1 . 13 6 3 . 14 6 4 . # # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Bienert, S.' 1 'Waterhouse, A.' 2 'de Beer, T.A.P.' 3 'Tauriello, G.' 4 'Studer, G.' 5 'Bordoli, L.' 6 'Schwede, T.' 7 # # loop_ _chem_comp.id _chem_comp.type _chem_comp.name _chem_comp.formula _chem_comp.formula_weight _chem_comp.ma_provenance ALA 'L-peptide linking' ALANINE 'C3 H7 N O2' 89.094 'CCD Core' ARG 'L-peptide linking' ARGININE 'C6 H15 N4 O2 1' 175.212 'CCD Core' ASN 'L-peptide linking' ASPARAGINE 'C4 H8 N2 O3' 132.119 'CCD Core' ASP 'L-peptide linking' 'ASPARTIC ACID' 'C4 H7 N O4' 133.103 'CCD Core' CYS 'L-peptide linking' CYSTEINE 'C3 H7 N O2 S' 121.154 'CCD Core' GLN 'L-peptide linking' GLUTAMINE 'C5 H10 N2 O3' 146.146 'CCD Core' GLU 'L-peptide linking' 'GLUTAMIC ACID' 'C5 H9 N O4' 147.130 'CCD Core' GLY 'peptide linking' GLYCINE 'C2 H5 N O2' 75.067 'CCD Core' HIS 'L-peptide linking' HISTIDINE 'C6 H10 N3 O2 1' 156.165 'CCD Core' ILE 'L-peptide linking' ISOLEUCINE 'C6 H13 N O2' 131.175 'CCD Core' LEU 'L-peptide linking' LEUCINE 'C6 H13 N O2' 131.175 'CCD Core' LYS 'L-peptide linking' LYSINE 'C6 H15 N2 O2 1' 147.198 'CCD Core' MET 'L-peptide linking' METHIONINE 'C5 H11 N O2 S' 149.208 'CCD Core' PHE 'L-peptide linking' PHENYLALANINE 'C9 H11 N O2' 165.192 'CCD Core' PRO 'L-peptide linking' PROLINE 'C5 H9 N O2' 115.132 'CCD Core' SER 'L-peptide linking' SERINE 'C3 H7 N O3' 105.093 'CCD Core' THR 'L-peptide linking' THREONINE 'C4 H9 N O3' 119.120 'CCD Core' TRP 'L-peptide linking' TRYPTOPHAN 'C11 H12 N2 O2' 204.229 'CCD Core' TYR 'L-peptide linking' TYROSINE 'C9 H11 N O3' 181.191 'CCD Core' VAL 'L-peptide linking' VALINE 'C5 H11 N O2' 117.148 'CCD Core' # # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.details 1 polymer man . 33747.963 1 . # # loop_ _struct_ref.id _struct_ref.entity_id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_align_begin _struct_ref.pdbx_seq_one_letter_code _struct_ref.details 1 1 UNP GPM6B_RAT Q9JJK1 1 ;MKPAMETAAEENTEQSQERKGCFECCIKCLGGVPYASLVATILCFSGVALFCGCGHVALAGTVAILEQHF STNTSDHALLSEVIQLMQYVIYGIASFFFLYGIILLAEGFYTTSAVKELHGEFKTTACGRCISGMFVFLT YVLGVAWLGVFGFSAVPVFMFYNIWSTCEVIKSPQSNGTSGVEQICVDVRQYGIIPWNAFPGKICGSALE NICNTNEFYMSYHLFIVACAGAGATVIALLIYMMATTYNYAVLKFKSREDCCPKF ; 'Neuronal membrane glycoprotein M6-b' # # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.seq_align_beg _struct_ref_seq.seq_align_end _struct_ref_seq.db_align_beg _struct_ref_seq.db_align_end 1 1 1 265 1 265 # # loop_ _ma_target_ref_db_details.target_entity_id _ma_target_ref_db_details.db_name _ma_target_ref_db_details.db_name_other_details _ma_target_ref_db_details.db_code _ma_target_ref_db_details.db_accession _ma_target_ref_db_details.seq_db_isoform _ma_target_ref_db_details.seq_db_align_begin _ma_target_ref_db_details.seq_db_align_end _ma_target_ref_db_details.ncbi_taxonomy_id _ma_target_ref_db_details.organism_scientific _ma_target_ref_db_details.seq_db_sequence_version_date _ma_target_ref_db_details.seq_db_sequence_checksum 1 UNP . GPM6B_RAT Q9JJK1 . 1 265 10116 'Rattus norvegicus (Rat)' 2000-10-01 81BA7690D70C1333 # # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_strand_id _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can 1 polypeptide(L) no no A ;MKPAMETAAEENTEQSQERKGCFECCIKCLGGVPYASLVATILCFSGVALFCGCGHVALAGTVAILEQHF STNTSDHALLSEVIQLMQYVIYGIASFFFLYGIILLAEGFYTTSAVKELHGEFKTTACGRCISGMFVFLT YVLGVAWLGVFGFSAVPVFMFYNIWSTCEVIKSPQSNGTSGVEQICVDVRQYGIIPWNAFPGKICGSALE NICNTNEFYMSYHLFIVACAGAGATVIALLIYMMATTYNYAVLKFKSREDCCPKF ; ;MKPAMETAAEENTEQSQERKGCFECCIKCLGGVPYASLVATILCFSGVALFCGCGHVALAGTVAILEQHF STNTSDHALLSEVIQLMQYVIYGIASFFFLYGIILLAEGFYTTSAVKELHGEFKTTACGRCISGMFVFLT YVLGVAWLGVFGFSAVPVFMFYNIWSTCEVIKSPQSNGTSGVEQICVDVRQYGIIPWNAFPGKICGSALE NICNTNEFYMSYHLFIVACAGAGATVIALLIYMMATTYNYAVLKFKSREDCCPKF ; # # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET . 1 2 LYS . 1 3 PRO . 1 4 ALA . 1 5 MET . 1 6 GLU . 1 7 THR . 1 8 ALA . 1 9 ALA . 1 10 GLU . 1 11 GLU . 1 12 ASN . 1 13 THR . 1 14 GLU . 1 15 GLN . 1 16 SER . 1 17 GLN . 1 18 GLU . 1 19 ARG . 1 20 LYS . 1 21 GLY . 1 22 CYS . 1 23 PHE . 1 24 GLU . 1 25 CYS . 1 26 CYS . 1 27 ILE . 1 28 LYS . 1 29 CYS . 1 30 LEU . 1 31 GLY . 1 32 GLY . 1 33 VAL . 1 34 PRO . 1 35 TYR . 1 36 ALA . 1 37 SER . 1 38 LEU . 1 39 VAL . 1 40 ALA . 1 41 THR . 1 42 ILE . 1 43 LEU . 1 44 CYS . 1 45 PHE . 1 46 SER . 1 47 GLY . 1 48 VAL . 1 49 ALA . 1 50 LEU . 1 51 PHE . 1 52 CYS . 1 53 GLY . 1 54 CYS . 1 55 GLY . 1 56 HIS . 1 57 VAL . 1 58 ALA . 1 59 LEU . 1 60 ALA . 1 61 GLY . 1 62 THR . 1 63 VAL . 1 64 ALA . 1 65 ILE . 1 66 LEU . 1 67 GLU . 1 68 GLN . 1 69 HIS . 1 70 PHE . 1 71 SER . 1 72 THR . 1 73 ASN . 1 74 THR . 1 75 SER . 1 76 ASP . 1 77 HIS . 1 78 ALA . 1 79 LEU . 1 80 LEU . 1 81 SER . 1 82 GLU . 1 83 VAL . 1 84 ILE . 1 85 GLN . 1 86 LEU . 1 87 MET . 1 88 GLN . 1 89 TYR . 1 90 VAL . 1 91 ILE . 1 92 TYR . 1 93 GLY . 1 94 ILE . 1 95 ALA . 1 96 SER . 1 97 PHE . 1 98 PHE . 1 99 PHE . 1 100 LEU . 1 101 TYR . 1 102 GLY . 1 103 ILE . 1 104 ILE . 1 105 LEU . 1 106 LEU . 1 107 ALA . 1 108 GLU . 1 109 GLY . 1 110 PHE . 1 111 TYR . 1 112 THR . 1 113 THR . 1 114 SER . 1 115 ALA . 1 116 VAL . 1 117 LYS . 1 118 GLU . 1 119 LEU . 1 120 HIS . 1 121 GLY . 1 122 GLU . 1 123 PHE . 1 124 LYS . 1 125 THR . 1 126 THR . 1 127 ALA . 1 128 CYS . 1 129 GLY . 1 130 ARG . 1 131 CYS . 1 132 ILE . 1 133 SER . 1 134 GLY . 1 135 MET . 1 136 PHE . 1 137 VAL . 1 138 PHE . 1 139 LEU . 1 140 THR . 1 141 TYR . 1 142 VAL . 1 143 LEU . 1 144 GLY . 1 145 VAL . 1 146 ALA . 1 147 TRP . 1 148 LEU . 1 149 GLY . 1 150 VAL . 1 151 PHE . 1 152 GLY . 1 153 PHE . 1 154 SER . 1 155 ALA . 1 156 VAL . 1 157 PRO . 1 158 VAL . 1 159 PHE . 1 160 MET . 1 161 PHE . 1 162 TYR . 1 163 ASN . 1 164 ILE . 1 165 TRP . 1 166 SER . 1 167 THR . 1 168 CYS . 1 169 GLU . 1 170 VAL . 1 171 ILE . 1 172 LYS . 1 173 SER . 1 174 PRO . 1 175 GLN . 1 176 SER . 1 177 ASN . 1 178 GLY . 1 179 THR . 1 180 SER . 1 181 GLY . 1 182 VAL . 1 183 GLU . 1 184 GLN . 1 185 ILE . 1 186 CYS . 1 187 VAL . 1 188 ASP . 1 189 VAL . 1 190 ARG . 1 191 GLN . 1 192 TYR . 1 193 GLY . 1 194 ILE . 1 195 ILE . 1 196 PRO . 1 197 TRP . 1 198 ASN . 1 199 ALA . 1 200 PHE . 1 201 PRO . 1 202 GLY . 1 203 LYS . 1 204 ILE . 1 205 CYS . 1 206 GLY . 1 207 SER . 1 208 ALA . 1 209 LEU . 1 210 GLU . 1 211 ASN . 1 212 ILE . 1 213 CYS . 1 214 ASN . 1 215 THR . 1 216 ASN . 1 217 GLU . 1 218 PHE . 1 219 TYR . 1 220 MET . 1 221 SER . 1 222 TYR . 1 223 HIS . 1 224 LEU . 1 225 PHE . 1 226 ILE . 1 227 VAL . 1 228 ALA . 1 229 CYS . 1 230 ALA . 1 231 GLY . 1 232 ALA . 1 233 GLY . 1 234 ALA . 1 235 THR . 1 236 VAL . 1 237 ILE . 1 238 ALA . 1 239 LEU . 1 240 LEU . 1 241 ILE . 1 242 TYR . 1 243 MET . 1 244 MET . 1 245 ALA . 1 246 THR . 1 247 THR . 1 248 TYR . 1 249 ASN . 1 250 TYR . 1 251 ALA . 1 252 VAL . 1 253 LEU . 1 254 LYS . 1 255 PHE . 1 256 LYS . 1 257 SER . 1 258 ARG . 1 259 GLU . 1 260 ASP . 1 261 CYS . 1 262 CYS . 1 263 PRO . 1 264 LYS . 1 265 PHE . # # loop_ _struct_asym.id _struct_asym.entity_id _struct_asym.details A 1 . # # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code A 1 1 MET 1 ? ? ? A . A 1 2 LYS 2 ? ? ? A . A 1 3 PRO 3 ? ? ? A . A 1 4 ALA 4 ? ? ? A . A 1 5 MET 5 ? ? ? A . A 1 6 GLU 6 ? ? ? A . A 1 7 THR 7 ? ? ? A . A 1 8 ALA 8 ? ? ? A . A 1 9 ALA 9 ? ? ? A . A 1 10 GLU 10 ? ? ? A . A 1 11 GLU 11 ? ? ? A . A 1 12 ASN 12 ? ? ? A . A 1 13 THR 13 ? ? ? A . A 1 14 GLU 14 ? ? ? A . A 1 15 GLN 15 ? ? ? A . A 1 16 SER 16 ? ? ? A . A 1 17 GLN 17 ? ? ? A . A 1 18 GLU 18 ? ? ? A . A 1 19 ARG 19 ? ? ? A . A 1 20 LYS 20 ? ? ? A . A 1 21 GLY 21 ? ? ? A . A 1 22 CYS 22 ? ? ? A . A 1 23 PHE 23 ? ? ? A . A 1 24 GLU 24 ? ? ? A . A 1 25 CYS 25 ? ? ? A . A 1 26 CYS 26 ? ? ? A . A 1 27 ILE 27 ? ? ? A . A 1 28 LYS 28 ? ? ? A . A 1 29 CYS 29 ? ? ? A . A 1 30 LEU 30 ? ? ? A . A 1 31 GLY 31 ? ? ? A . A 1 32 GLY 32 ? ? ? A . A 1 33 VAL 33 ? ? ? A . A 1 34 PRO 34 ? ? ? A . A 1 35 TYR 35 ? ? ? A . A 1 36 ALA 36 ? ? ? A . A 1 37 SER 37 ? ? ? A . A 1 38 LEU 38 ? ? ? A . A 1 39 VAL 39 ? ? ? A . A 1 40 ALA 40 ? ? ? A . A 1 41 THR 41 ? ? ? A . A 1 42 ILE 42 ? ? ? A . A 1 43 LEU 43 ? ? ? A . A 1 44 CYS 44 ? ? ? A . A 1 45 PHE 45 ? ? ? A . A 1 46 SER 46 ? ? ? A . A 1 47 GLY 47 ? ? ? A . A 1 48 VAL 48 ? ? ? A . A 1 49 ALA 49 ? ? ? A . A 1 50 LEU 50 ? ? ? A . A 1 51 PHE 51 ? ? ? A . A 1 52 CYS 52 ? ? ? A . A 1 53 GLY 53 ? ? ? A . A 1 54 CYS 54 ? ? ? A . A 1 55 GLY 55 ? ? ? A . A 1 56 HIS 56 ? ? ? A . A 1 57 VAL 57 ? ? ? A . A 1 58 ALA 58 ? ? ? A . A 1 59 LEU 59 ? ? ? A . A 1 60 ALA 60 ? ? ? A . A 1 61 GLY 61 ? ? ? A . A 1 62 THR 62 ? ? ? A . A 1 63 VAL 63 ? ? ? A . A 1 64 ALA 64 ? ? ? A . A 1 65 ILE 65 ? ? ? A . A 1 66 LEU 66 ? ? ? A . A 1 67 GLU 67 ? ? ? A . A 1 68 GLN 68 ? ? ? A . A 1 69 HIS 69 ? ? ? A . A 1 70 PHE 70 ? ? ? A . A 1 71 SER 71 ? ? ? A . A 1 72 THR 72 ? ? ? A . A 1 73 ASN 73 ? ? ? A . A 1 74 THR 74 ? ? ? A . A 1 75 SER 75 ? ? ? A . A 1 76 ASP 76 ? ? ? A . A 1 77 HIS 77 ? ? ? A . A 1 78 ALA 78 ? ? ? A . A 1 79 LEU 79 ? ? ? A . A 1 80 LEU 80 ? ? ? A . A 1 81 SER 81 ? ? ? A . A 1 82 GLU 82 ? ? ? A . A 1 83 VAL 83 ? ? ? A . A 1 84 ILE 84 ? ? ? A . A 1 85 GLN 85 ? ? ? A . A 1 86 LEU 86 ? ? ? A . A 1 87 MET 87 ? ? ? A . A 1 88 GLN 88 ? ? ? A . A 1 89 TYR 89 ? ? ? A . A 1 90 VAL 90 ? ? ? A . A 1 91 ILE 91 ? ? ? A . A 1 92 TYR 92 ? ? ? A . A 1 93 GLY 93 ? ? ? A . A 1 94 ILE 94 ? ? ? A . A 1 95 ALA 95 ? ? ? A . A 1 96 SER 96 ? ? ? A . A 1 97 PHE 97 ? ? ? A . A 1 98 PHE 98 ? ? ? A . A 1 99 PHE 99 ? ? ? A . A 1 100 LEU 100 ? ? ? A . A 1 101 TYR 101 ? ? ? A . A 1 102 GLY 102 ? ? ? A . A 1 103 ILE 103 ? ? ? A . A 1 104 ILE 104 ? ? ? A . A 1 105 LEU 105 ? ? ? A . A 1 106 LEU 106 ? ? ? A . A 1 107 ALA 107 ? ? ? A . A 1 108 GLU 108 ? ? ? A . A 1 109 GLY 109 ? ? ? A . A 1 110 PHE 110 ? ? ? A . A 1 111 TYR 111 ? ? ? A . A 1 112 THR 112 ? ? ? A . A 1 113 THR 113 ? ? ? A . A 1 114 SER 114 ? ? ? A . A 1 115 ALA 115 ? ? ? A . A 1 116 VAL 116 ? ? ? A . A 1 117 LYS 117 ? ? ? A . A 1 118 GLU 118 ? ? ? A . A 1 119 LEU 119 ? ? ? A . A 1 120 HIS 120 ? ? ? A . A 1 121 GLY 121 ? ? ? A . A 1 122 GLU 122 ? ? ? A . A 1 123 PHE 123 ? ? ? A . A 1 124 LYS 124 ? ? ? A . A 1 125 THR 125 ? ? ? A . A 1 126 THR 126 ? ? ? A . A 1 127 ALA 127 ? ? ? A . A 1 128 CYS 128 ? ? ? A . A 1 129 GLY 129 ? ? ? A . A 1 130 ARG 130 ? ? ? A . A 1 131 CYS 131 ? ? ? A . A 1 132 ILE 132 ? ? ? A . A 1 133 SER 133 ? ? ? A . A 1 134 GLY 134 ? ? ? A . A 1 135 MET 135 ? ? ? A . A 1 136 PHE 136 ? ? ? A . A 1 137 VAL 137 ? ? ? A . A 1 138 PHE 138 ? ? ? A . A 1 139 LEU 139 ? ? ? A . A 1 140 THR 140 ? ? ? A . A 1 141 TYR 141 ? ? ? A . A 1 142 VAL 142 ? ? ? A . A 1 143 LEU 143 ? ? ? A . A 1 144 GLY 144 ? ? ? A . A 1 145 VAL 145 ? ? ? A . A 1 146 ALA 146 ? ? ? A . A 1 147 TRP 147 ? ? ? A . A 1 148 LEU 148 ? ? ? A . A 1 149 GLY 149 ? ? ? A . A 1 150 VAL 150 ? ? ? A . A 1 151 PHE 151 ? ? ? A . A 1 152 GLY 152 ? ? ? A . A 1 153 PHE 153 ? ? ? A . A 1 154 SER 154 ? ? ? A . A 1 155 ALA 155 ? ? ? A . A 1 156 VAL 156 ? ? ? A . A 1 157 PRO 157 ? ? ? A . A 1 158 VAL 158 ? ? ? A . A 1 159 PHE 159 ? ? ? A . A 1 160 MET 160 ? ? ? A . A 1 161 PHE 161 ? ? ? A . A 1 162 TYR 162 ? ? ? A . A 1 163 ASN 163 ? ? ? A . A 1 164 ILE 164 ? ? ? A . A 1 165 TRP 165 ? ? ? A . A 1 166 SER 166 ? ? ? A . A 1 167 THR 167 ? ? ? A . A 1 168 CYS 168 ? ? ? A . A 1 169 GLU 169 ? ? ? A . A 1 170 VAL 170 ? ? ? A . A 1 171 ILE 171 ? ? ? A . A 1 172 LYS 172 ? ? ? A . A 1 173 SER 173 ? ? ? A . A 1 174 PRO 174 ? ? ? A . A 1 175 GLN 175 ? ? ? A . A 1 176 SER 176 ? ? ? A . A 1 177 ASN 177 ? ? ? A . A 1 178 GLY 178 ? ? ? A . A 1 179 THR 179 ? ? ? A . A 1 180 SER 180 ? ? ? A . A 1 181 GLY 181 ? ? ? A . A 1 182 VAL 182 ? ? ? A . A 1 183 GLU 183 ? ? ? A . A 1 184 GLN 184 ? ? ? A . A 1 185 ILE 185 ? ? ? A . A 1 186 CYS 186 ? ? ? A . A 1 187 VAL 187 ? ? ? A . A 1 188 ASP 188 ? ? ? A . A 1 189 VAL 189 ? ? ? A . A 1 190 ARG 190 ? ? ? A . A 1 191 GLN 191 ? ? ? A . A 1 192 TYR 192 ? ? ? A . A 1 193 GLY 193 ? ? ? A . A 1 194 ILE 194 ? ? ? A . A 1 195 ILE 195 ? ? ? A . A 1 196 PRO 196 ? ? ? A . A 1 197 TRP 197 ? ? ? A . A 1 198 ASN 198 ? ? ? A . A 1 199 ALA 199 ? ? ? A . A 1 200 PHE 200 ? ? ? A . A 1 201 PRO 201 ? ? ? A . A 1 202 GLY 202 ? ? ? A . A 1 203 LYS 203 ? ? ? A . A 1 204 ILE 204 ? ? ? A . A 1 205 CYS 205 ? ? ? A . A 1 206 GLY 206 ? ? ? A . A 1 207 SER 207 ? ? ? A . A 1 208 ALA 208 ? ? ? A . A 1 209 LEU 209 ? ? ? A . A 1 210 GLU 210 ? ? ? A . A 1 211 ASN 211 ? ? ? A . A 1 212 ILE 212 ? ? ? A . A 1 213 CYS 213 ? ? ? A . A 1 214 ASN 214 ? ? ? A . A 1 215 THR 215 ? ? ? A . A 1 216 ASN 216 ? ? ? A . A 1 217 GLU 217 ? ? ? A . A 1 218 PHE 218 ? ? ? A . A 1 219 TYR 219 ? ? ? A . A 1 220 MET 220 ? ? ? A . A 1 221 SER 221 ? ? ? A . A 1 222 TYR 222 ? ? ? A . A 1 223 HIS 223 223 HIS HIS A . A 1 224 LEU 224 224 LEU LEU A . A 1 225 PHE 225 225 PHE PHE A . A 1 226 ILE 226 226 ILE ILE A . A 1 227 VAL 227 227 VAL VAL A . A 1 228 ALA 228 228 ALA ALA A . A 1 229 CYS 229 229 CYS CYS A . A 1 230 ALA 230 230 ALA ALA A . A 1 231 GLY 231 231 GLY GLY A . A 1 232 ALA 232 232 ALA ALA A . A 1 233 GLY 233 233 GLY GLY A . A 1 234 ALA 234 234 ALA ALA A . A 1 235 THR 235 235 THR THR A . A 1 236 VAL 236 236 VAL VAL A . A 1 237 ILE 237 237 ILE ILE A . A 1 238 ALA 238 238 ALA ALA A . A 1 239 LEU 239 239 LEU LEU A . A 1 240 LEU 240 240 LEU LEU A . A 1 241 ILE 241 241 ILE ILE A . A 1 242 TYR 242 242 TYR TYR A . A 1 243 MET 243 243 MET MET A . A 1 244 MET 244 244 MET MET A . A 1 245 ALA 245 245 ALA ALA A . A 1 246 THR 246 246 THR THR A . A 1 247 THR 247 247 THR THR A . A 1 248 TYR 248 ? ? ? A . A 1 249 ASN 249 ? ? ? A . A 1 250 TYR 250 ? ? ? A . A 1 251 ALA 251 ? ? ? A . A 1 252 VAL 252 ? ? ? A . A 1 253 LEU 253 ? ? ? A . A 1 254 LYS 254 ? ? ? A . A 1 255 PHE 255 ? ? ? A . A 1 256 LYS 256 ? ? ? A . A 1 257 SER 257 ? ? ? A . A 1 258 ARG 258 ? ? ? A . A 1 259 GLU 259 ? ? ? A . A 1 260 ASP 260 ? ? ? A . A 1 261 CYS 261 ? ? ? A . A 1 262 CYS 262 ? ? ? A . A 1 263 PRO 263 ? ? ? A . A 1 264 LYS 264 ? ? ? A . A 1 265 PHE 265 ? ? ? A . # # loop_ _ma_data.id _ma_data.name _ma_data.content_type _ma_data.content_type_other_details 1 'Claudin-4 {PDB ID=7tdn, label_asym_id=A, auth_asym_id=A, SMTL ID=7tdn.1.A}' 'template structure' . 2 . target . 3 'Target-template alignment by HHblits to 7tdn, label_asym_id=A' 'target-template alignment' . 4 'model 4' 'model coordinates' . 5 SMTL 'reference database' . 6 PDB 'reference database' . 7 'Template search output' other 'Results of the sequence search' # # loop_ _ma_data_group.ordinal_id _ma_data_group.group_id _ma_data_group.data_id 1 1 2 2 1 5 3 1 6 4 2 7 5 3 2 6 3 1 7 3 3 8 4 1 9 4 3 10 5 4 # # loop_ _ma_data_ref_db.data_id _ma_data_ref_db.name _ma_data_ref_db.location_url _ma_data_ref_db.version _ma_data_ref_db.release_date 5 SMTL https://swissmodel.expasy.org/templates/ . 2025-02-12 6 PDB https://www.wwpdb.org . 2025-02-07 # # loop_ _ma_target_entity.entity_id _ma_target_entity.data_id _ma_target_entity.origin 1 2 'reference database' # # loop_ _ma_target_entity_instance.asym_id _ma_target_entity_instance.entity_id _ma_target_entity_instance.details A 1 . # # loop_ _ma_template_trans_matrix.id _ma_template_trans_matrix.rot_matrix[1][1] _ma_template_trans_matrix.rot_matrix[2][1] _ma_template_trans_matrix.rot_matrix[3][1] _ma_template_trans_matrix.rot_matrix[1][2] _ma_template_trans_matrix.rot_matrix[2][2] _ma_template_trans_matrix.rot_matrix[3][2] _ma_template_trans_matrix.rot_matrix[1][3] _ma_template_trans_matrix.rot_matrix[2][3] _ma_template_trans_matrix.rot_matrix[3][3] _ma_template_trans_matrix.tr_vector[1] _ma_template_trans_matrix.tr_vector[2] _ma_template_trans_matrix.tr_vector[3] 1 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0 0 0 # # loop_ _ma_template_details.ordinal_id _ma_template_details.template_id _ma_template_details.template_origin _ma_template_details.template_entity_type _ma_template_details.template_trans_matrix_id _ma_template_details.template_data_id _ma_template_details.target_asym_id _ma_template_details.template_label_asym_id _ma_template_details.template_label_entity_id _ma_template_details.template_model_num _ma_template_details.template_auth_asym_id 1 1 'reference database' polymer 1 1 A A 1 1 A # # loop_ _ma_template_poly.template_id _ma_template_poly.seq_one_letter_code _ma_template_poly.seq_one_letter_code_can 1 ;MASMGLQVMGIALAVLGWLAVMLCCALPMWRVTAFIGSNIVTSQTIWEGLWMNCVVQSTGQMQCKVYDSL LALPQDLQAARALVIISIIVAALGVLLSVVGGKCTNCLEDESAKAKTMIVAGVVFLLAGLMVIVPVSWTA HNIIQDFYNPLVASGQKREMGASLYVGWAASGLLLLGGGLLCCNCPPRTDKPYSAKYSAARSAAASNYV ; ;MASMGLQVMGIALAVLGWLAVMLCCALPMWRVTAFIGSNIVTSQTIWEGLWMNCVVQSTGQMQCKVYDSL LALPQDLQAARALVIISIIVAALGVLLSVVGGKCTNCLEDESAKAKTMIVAGVVFLLAGLMVIVPVSWTA HNIIQDFYNPLVASGQKREMGASLYVGWAASGLLLLGGGLLCCNCPPRTDKPYSAKYSAARSAAASNYV ; # # loop_ _ma_template_poly_segment.id _ma_template_poly_segment.template_id _ma_template_poly_segment.residue_number_begin _ma_template_poly_segment.residue_number_end 1 1 162 188 # # loop_ _ma_template_ref_db_details.template_id _ma_template_ref_db_details.db_name _ma_template_ref_db_details.db_name_other_details _ma_template_ref_db_details.db_accession_code _ma_template_ref_db_details.db_version_date 1 PDB . 7tdn 2024-10-16 # # loop_ _ma_target_template_poly_mapping.id _ma_target_template_poly_mapping.template_segment_id _ma_target_template_poly_mapping.target_asym_id _ma_target_template_poly_mapping.target_seq_id_begin _ma_target_template_poly_mapping.target_seq_id_end 1 1 A 1 265 # # loop_ _ma_alignment_info.alignment_id _ma_alignment_info.data_id _ma_alignment_info.software_group_id _ma_alignment_info.alignment_length _ma_alignment_info.alignment_type _ma_alignment_info.alignment_mode 1 3 1 265 'target-template pairwise alignment' local # # loop_ _ma_alignment_details.ordinal_id _ma_alignment_details.alignment_id _ma_alignment_details.template_segment_id _ma_alignment_details.target_asym_id _ma_alignment_details.score_type _ma_alignment_details.score_type_other_details _ma_alignment_details.score_value _ma_alignment_details.percent_sequence_identity _ma_alignment_details.sequence_identity_denominator _ma_alignment_details.sequence_identity_denominator_other_details 1 1 1 A 'HHblits e-value' . 23.000 11.111 'Number of aligned residue pairs (not including the gaps)' . # # loop_ _ma_alignment.ordinal_id _ma_alignment.alignment_id _ma_alignment.target_template_flag _ma_alignment.sequence 1 1 1 MKPAMETAAEENTEQSQERKGCFECCIKCLGGVPYASLVATILCFSGVALFCGCGHVALAGTVAILEQHFSTNTSDHALLSEVIQLMQYVIYGIASFFFLYGIILLAEGFYTTSAVKELHGEFKTTACGRCISGMFVFLTYVLGVAWLGVFGFSAVPVFMFYNIWSTCEVIKSPQSNGTSGVEQICVDVRQYGIIPWNAFPGKICGSALENICNTNEFYMSYHLFIVACAGAGATVIALLIYMMATTYNYAVLKFKSREDCCPKF 2 1 2 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ASLYVGWAASGLLLLGGGLLCCNCPPR---------------- # # loop_ _ma_protocol_step.ordinal_id _ma_protocol_step.protocol_id _ma_protocol_step.step_id _ma_protocol_step.method_type _ma_protocol_step.step_name _ma_protocol_step.details _ma_protocol_step.software_group_id _ma_protocol_step.input_data_group_id _ma_protocol_step.output_data_group_id 1 1 1 'template search' 'template search' 'SWISS-MODEL template search in PDB' 2 1 2 2 1 2 'template selection' 'template selection' 'Automatic template selection by SWISS-MODEL {QSQE=0.000}' 3 2 4 3 1 3 modeling 'homology modeling' 'SWISS-MODEL auto-model mode using ProMod3 on 7tdn.1' 4 3 5 # # loop_ _ma_model_list.ordinal_id _ma_model_list.model_id _ma_model_list.model_group_id _ma_model_list.model_name _ma_model_list.model_group_name _ma_model_list.data_id _ma_model_list.model_type _ma_model_list.model_type_other_details 1 1 1 'model 4' . 4 'Homology model' . # # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_alt_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.auth_seq_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.label_entity_id _atom_site.auth_asym_id _atom_site.auth_comp_id _atom_site.B_iso_or_equiv _atom_site.pdbx_PDB_model_num ATOM 1 N N . HIS 223 223 ? A -6.278 7.889 -36.641 1 1 A HIS 0.250 1 ATOM 2 C CA . HIS 223 223 ? A -6.241 7.637 -38.132 1 1 A HIS 0.250 1 ATOM 3 C C . HIS 223 223 ? A -5.360 6.465 -38.559 1 1 A HIS 0.250 1 ATOM 4 O O . HIS 223 223 ? A -5.789 5.631 -39.326 1 1 A HIS 0.250 1 ATOM 5 C CB . HIS 223 223 ? A -5.886 8.930 -38.899 1 1 A HIS 0.250 1 ATOM 6 C CG . HIS 223 223 ? A -6.028 8.767 -40.369 1 1 A HIS 0.250 1 ATOM 7 N ND1 . HIS 223 223 ? A -7.308 8.637 -40.859 1 1 A HIS 0.250 1 ATOM 8 C CD2 . HIS 223 223 ? A -5.124 8.723 -41.371 1 1 A HIS 0.250 1 ATOM 9 C CE1 . HIS 223 223 ? A -7.159 8.529 -42.162 1 1 A HIS 0.250 1 ATOM 10 N NE2 . HIS 223 223 ? A -5.849 8.571 -42.535 1 1 A HIS 0.250 1 ATOM 11 N N . LEU 224 224 ? A -4.128 6.294 -38.015 1 1 A LEU 0.320 1 ATOM 12 C CA . LEU 224 224 ? A -3.308 5.120 -38.303 1 1 A LEU 0.320 1 ATOM 13 C C . LEU 224 224 ? A -3.949 3.781 -37.931 1 1 A LEU 0.320 1 ATOM 14 O O . LEU 224 224 ? A -3.883 2.818 -38.676 1 1 A LEU 0.320 1 ATOM 15 C CB . LEU 224 224 ? A -1.955 5.267 -37.578 1 1 A LEU 0.320 1 ATOM 16 C CG . LEU 224 224 ? A -1.083 6.426 -38.107 1 1 A LEU 0.320 1 ATOM 17 C CD1 . LEU 224 224 ? A 0.155 6.582 -37.213 1 1 A LEU 0.320 1 ATOM 18 C CD2 . LEU 224 224 ? A -0.654 6.194 -39.568 1 1 A LEU 0.320 1 ATOM 19 N N . PHE 225 225 ? A -4.664 3.729 -36.782 1 1 A PHE 0.610 1 ATOM 20 C CA . PHE 225 225 ? A -5.494 2.596 -36.404 1 1 A PHE 0.610 1 ATOM 21 C C . PHE 225 225 ? A -6.627 2.309 -37.416 1 1 A PHE 0.610 1 ATOM 22 O O . PHE 225 225 ? A -6.869 1.170 -37.776 1 1 A PHE 0.610 1 ATOM 23 C CB . PHE 225 225 ? A -6.016 2.813 -34.954 1 1 A PHE 0.610 1 ATOM 24 C CG . PHE 225 225 ? A -6.686 1.571 -34.435 1 1 A PHE 0.610 1 ATOM 25 C CD1 . PHE 225 225 ? A -8.085 1.496 -34.355 1 1 A PHE 0.610 1 ATOM 26 C CD2 . PHE 225 225 ? A -5.922 0.452 -34.067 1 1 A PHE 0.610 1 ATOM 27 C CE1 . PHE 225 225 ? A -8.710 0.333 -33.888 1 1 A PHE 0.610 1 ATOM 28 C CE2 . PHE 225 225 ? A -6.544 -0.714 -33.604 1 1 A PHE 0.610 1 ATOM 29 C CZ . PHE 225 225 ? A -7.939 -0.771 -33.507 1 1 A PHE 0.610 1 ATOM 30 N N . ILE 226 226 ? A -7.297 3.360 -37.963 1 1 A ILE 0.680 1 ATOM 31 C CA . ILE 226 226 ? A -8.289 3.247 -39.040 1 1 A ILE 0.680 1 ATOM 32 C C . ILE 226 226 ? A -7.674 2.640 -40.297 1 1 A ILE 0.680 1 ATOM 33 O O . ILE 226 226 ? A -8.236 1.733 -40.903 1 1 A ILE 0.680 1 ATOM 34 C CB . ILE 226 226 ? A -8.915 4.613 -39.385 1 1 A ILE 0.680 1 ATOM 35 C CG1 . ILE 226 226 ? A -9.745 5.157 -38.192 1 1 A ILE 0.680 1 ATOM 36 C CG2 . ILE 226 226 ? A -9.773 4.529 -40.678 1 1 A ILE 0.680 1 ATOM 37 C CD1 . ILE 226 226 ? A -10.194 6.619 -38.366 1 1 A ILE 0.680 1 ATOM 38 N N . VAL 227 227 ? A -6.460 3.096 -40.686 1 1 A VAL 0.680 1 ATOM 39 C CA . VAL 227 227 ? A -5.701 2.541 -41.801 1 1 A VAL 0.680 1 ATOM 40 C C . VAL 227 227 ? A -5.355 1.065 -41.587 1 1 A VAL 0.680 1 ATOM 41 O O . VAL 227 227 ? A -5.528 0.243 -42.483 1 1 A VAL 0.680 1 ATOM 42 C CB . VAL 227 227 ? A -4.440 3.365 -42.083 1 1 A VAL 0.680 1 ATOM 43 C CG1 . VAL 227 227 ? A -3.570 2.709 -43.181 1 1 A VAL 0.680 1 ATOM 44 C CG2 . VAL 227 227 ? A -4.864 4.778 -42.542 1 1 A VAL 0.680 1 ATOM 45 N N . ALA 228 228 ? A -4.920 0.683 -40.361 1 1 A ALA 0.690 1 ATOM 46 C CA . ALA 228 228 ? A -4.673 -0.694 -39.961 1 1 A ALA 0.690 1 ATOM 47 C C . ALA 228 228 ? A -5.923 -1.576 -40.058 1 1 A ALA 0.690 1 ATOM 48 O O . ALA 228 228 ? A -5.876 -2.679 -40.599 1 1 A ALA 0.690 1 ATOM 49 C CB . ALA 228 228 ? A -4.109 -0.734 -38.518 1 1 A ALA 0.690 1 ATOM 50 N N . CYS 229 229 ? A -7.091 -1.074 -39.592 1 1 A CYS 0.700 1 ATOM 51 C CA . CYS 229 229 ? A -8.390 -1.724 -39.730 1 1 A CYS 0.700 1 ATOM 52 C C . CYS 229 229 ? A -8.815 -1.926 -41.182 1 1 A CYS 0.700 1 ATOM 53 O O . CYS 229 229 ? A -9.279 -3.000 -41.560 1 1 A CYS 0.700 1 ATOM 54 C CB . CYS 229 229 ? A -9.506 -0.918 -39.003 1 1 A CYS 0.700 1 ATOM 55 S SG . CYS 229 229 ? A -9.347 -0.942 -37.191 1 1 A CYS 0.700 1 ATOM 56 N N . ALA 230 230 ? A -8.630 -0.902 -42.047 1 1 A ALA 0.690 1 ATOM 57 C CA . ALA 230 230 ? A -8.863 -0.989 -43.477 1 1 A ALA 0.690 1 ATOM 58 C C . ALA 230 230 ? A -7.952 -1.993 -44.184 1 1 A ALA 0.690 1 ATOM 59 O O . ALA 230 230 ? A -8.401 -2.785 -45.006 1 1 A ALA 0.690 1 ATOM 60 C CB . ALA 230 230 ? A -8.700 0.402 -44.131 1 1 A ALA 0.690 1 ATOM 61 N N . GLY 231 231 ? A -6.643 -2.008 -43.832 1 1 A GLY 0.650 1 ATOM 62 C CA . GLY 231 231 ? A -5.679 -2.955 -44.382 1 1 A GLY 0.650 1 ATOM 63 C C . GLY 231 231 ? A -5.940 -4.375 -43.968 1 1 A GLY 0.650 1 ATOM 64 O O . GLY 231 231 ? A -5.880 -5.283 -44.789 1 1 A GLY 0.650 1 ATOM 65 N N . ALA 232 232 ? A -6.299 -4.611 -42.688 1 1 A ALA 0.670 1 ATOM 66 C CA . ALA 232 232 ? A -6.736 -5.913 -42.229 1 1 A ALA 0.670 1 ATOM 67 C C . ALA 232 232 ? A -8.006 -6.384 -42.932 1 1 A ALA 0.670 1 ATOM 68 O O . ALA 232 232 ? A -8.057 -7.492 -43.441 1 1 A ALA 0.670 1 ATOM 69 C CB . ALA 232 232 ? A -6.952 -5.907 -40.699 1 1 A ALA 0.670 1 ATOM 70 N N . GLY 233 233 ? A -9.038 -5.510 -43.053 1 1 A GLY 0.660 1 ATOM 71 C CA . GLY 233 233 ? A -10.290 -5.874 -43.710 1 1 A GLY 0.660 1 ATOM 72 C C . GLY 233 233 ? A -10.152 -6.187 -45.177 1 1 A GLY 0.660 1 ATOM 73 O O . GLY 233 233 ? A -10.699 -7.179 -45.649 1 1 A GLY 0.660 1 ATOM 74 N N . ALA 234 234 ? A -9.373 -5.391 -45.938 1 1 A ALA 0.670 1 ATOM 75 C CA . ALA 234 234 ? A -9.082 -5.656 -47.335 1 1 A ALA 0.670 1 ATOM 76 C C . ALA 234 234 ? A -8.272 -6.932 -47.559 1 1 A ALA 0.670 1 ATOM 77 O O . ALA 234 234 ? A -8.568 -7.707 -48.467 1 1 A ALA 0.670 1 ATOM 78 C CB . ALA 234 234 ? A -8.374 -4.447 -47.980 1 1 A ALA 0.670 1 ATOM 79 N N . THR 235 235 ? A -7.257 -7.208 -46.703 1 1 A THR 0.650 1 ATOM 80 C CA . THR 235 235 ? A -6.495 -8.463 -46.715 1 1 A THR 0.650 1 ATOM 81 C C . THR 235 235 ? A -7.380 -9.663 -46.455 1 1 A THR 0.650 1 ATOM 82 O O . THR 235 235 ? A -7.304 -10.653 -47.176 1 1 A THR 0.650 1 ATOM 83 C CB . THR 235 235 ? A -5.338 -8.494 -45.721 1 1 A THR 0.650 1 ATOM 84 O OG1 . THR 235 235 ? A -4.372 -7.527 -46.093 1 1 A THR 0.650 1 ATOM 85 C CG2 . THR 235 235 ? A -4.565 -9.824 -45.730 1 1 A THR 0.650 1 ATOM 86 N N . VAL 236 236 ? A -8.303 -9.589 -45.461 1 1 A VAL 0.670 1 ATOM 87 C CA . VAL 236 236 ? A -9.295 -10.634 -45.212 1 1 A VAL 0.670 1 ATOM 88 C C . VAL 236 236 ? A -10.173 -10.868 -46.435 1 1 A VAL 0.670 1 ATOM 89 O O . VAL 236 236 ? A -10.299 -11.993 -46.896 1 1 A VAL 0.670 1 ATOM 90 C CB . VAL 236 236 ? A -10.175 -10.324 -43.994 1 1 A VAL 0.670 1 ATOM 91 C CG1 . VAL 236 236 ? A -11.343 -11.326 -43.830 1 1 A VAL 0.670 1 ATOM 92 C CG2 . VAL 236 236 ? A -9.311 -10.383 -42.719 1 1 A VAL 0.670 1 ATOM 93 N N . ILE 237 237 ? A -10.722 -9.793 -47.053 1 1 A ILE 0.670 1 ATOM 94 C CA . ILE 237 237 ? A -11.560 -9.888 -48.247 1 1 A ILE 0.670 1 ATOM 95 C C . ILE 237 237 ? A -10.831 -10.536 -49.419 1 1 A ILE 0.670 1 ATOM 96 O O . ILE 237 237 ? A -11.359 -11.438 -50.065 1 1 A ILE 0.670 1 ATOM 97 C CB . ILE 237 237 ? A -12.102 -8.512 -48.653 1 1 A ILE 0.670 1 ATOM 98 C CG1 . ILE 237 237 ? A -13.097 -8.004 -47.579 1 1 A ILE 0.670 1 ATOM 99 C CG2 . ILE 237 237 ? A -12.786 -8.546 -50.046 1 1 A ILE 0.670 1 ATOM 100 C CD1 . ILE 237 237 ? A -13.433 -6.513 -47.722 1 1 A ILE 0.670 1 ATOM 101 N N . ALA 238 238 ? A -9.564 -10.132 -49.677 1 1 A ALA 0.660 1 ATOM 102 C CA . ALA 238 238 ? A -8.725 -10.697 -50.715 1 1 A ALA 0.660 1 ATOM 103 C C . ALA 238 238 ? A -8.461 -12.188 -50.521 1 1 A ALA 0.660 1 ATOM 104 O O . ALA 238 238 ? A -8.613 -12.975 -51.451 1 1 A ALA 0.660 1 ATOM 105 C CB . ALA 238 238 ? A -7.377 -9.938 -50.768 1 1 A ALA 0.660 1 ATOM 106 N N . LEU 239 239 ? A -8.125 -12.618 -49.282 1 1 A LEU 0.620 1 ATOM 107 C CA . LEU 239 239 ? A -7.954 -14.017 -48.920 1 1 A LEU 0.620 1 ATOM 108 C C . LEU 239 239 ? A -9.220 -14.835 -49.077 1 1 A LEU 0.620 1 ATOM 109 O O . LEU 239 239 ? A -9.191 -15.937 -49.614 1 1 A LEU 0.620 1 ATOM 110 C CB . LEU 239 239 ? A -7.471 -14.165 -47.455 1 1 A LEU 0.620 1 ATOM 111 C CG . LEU 239 239 ? A -6.034 -13.671 -47.210 1 1 A LEU 0.620 1 ATOM 112 C CD1 . LEU 239 239 ? A -5.751 -13.673 -45.699 1 1 A LEU 0.620 1 ATOM 113 C CD2 . LEU 239 239 ? A -4.992 -14.509 -47.976 1 1 A LEU 0.620 1 ATOM 114 N N . LEU 240 240 ? A -10.378 -14.301 -48.642 1 1 A LEU 0.640 1 ATOM 115 C CA . LEU 240 240 ? A -11.662 -14.956 -48.806 1 1 A LEU 0.640 1 ATOM 116 C C . LEU 240 240 ? A -12.038 -15.175 -50.259 1 1 A LEU 0.640 1 ATOM 117 O O . LEU 240 240 ? A -12.376 -16.287 -50.648 1 1 A LEU 0.640 1 ATOM 118 C CB . LEU 240 240 ? A -12.783 -14.136 -48.128 1 1 A LEU 0.640 1 ATOM 119 C CG . LEU 240 240 ? A -12.713 -14.120 -46.589 1 1 A LEU 0.640 1 ATOM 120 C CD1 . LEU 240 240 ? A -13.735 -13.103 -46.060 1 1 A LEU 0.640 1 ATOM 121 C CD2 . LEU 240 240 ? A -12.928 -15.508 -45.959 1 1 A LEU 0.640 1 ATOM 122 N N . ILE 241 241 ? A -11.916 -14.142 -51.117 1 1 A ILE 0.580 1 ATOM 123 C CA . ILE 241 241 ? A -12.181 -14.249 -52.547 1 1 A ILE 0.580 1 ATOM 124 C C . ILE 241 241 ? A -11.228 -15.220 -53.235 1 1 A ILE 0.580 1 ATOM 125 O O . ILE 241 241 ? A -11.649 -16.029 -54.048 1 1 A ILE 0.580 1 ATOM 126 C CB . ILE 241 241 ? A -12.187 -12.875 -53.224 1 1 A ILE 0.580 1 ATOM 127 C CG1 . ILE 241 241 ? A -13.387 -12.049 -52.690 1 1 A ILE 0.580 1 ATOM 128 C CG2 . ILE 241 241 ? A -12.264 -13.009 -54.768 1 1 A ILE 0.580 1 ATOM 129 C CD1 . ILE 241 241 ? A -13.358 -10.576 -53.119 1 1 A ILE 0.580 1 ATOM 130 N N . TYR 242 242 ? A -9.925 -15.179 -52.875 1 1 A TYR 0.480 1 ATOM 131 C CA . TYR 242 242 ? A -8.895 -16.045 -53.414 1 1 A TYR 0.480 1 ATOM 132 C C . TYR 242 242 ? A -9.058 -17.528 -53.060 1 1 A TYR 0.480 1 ATOM 133 O O . TYR 242 242 ? A -8.742 -18.391 -53.859 1 1 A TYR 0.480 1 ATOM 134 C CB . TYR 242 242 ? A -7.503 -15.510 -52.968 1 1 A TYR 0.480 1 ATOM 135 C CG . TYR 242 242 ? A -6.376 -16.168 -53.715 1 1 A TYR 0.480 1 ATOM 136 C CD1 . TYR 242 242 ? A -5.547 -17.104 -53.078 1 1 A TYR 0.480 1 ATOM 137 C CD2 . TYR 242 242 ? A -6.164 -15.884 -55.074 1 1 A TYR 0.480 1 ATOM 138 C CE1 . TYR 242 242 ? A -4.510 -17.730 -53.782 1 1 A TYR 0.480 1 ATOM 139 C CE2 . TYR 242 242 ? A -5.125 -16.509 -55.779 1 1 A TYR 0.480 1 ATOM 140 C CZ . TYR 242 242 ? A -4.288 -17.420 -55.125 1 1 A TYR 0.480 1 ATOM 141 O OH . TYR 242 242 ? A -3.217 -18.025 -55.813 1 1 A TYR 0.480 1 ATOM 142 N N . MET 243 243 ? A -9.525 -17.846 -51.829 1 1 A MET 0.350 1 ATOM 143 C CA . MET 243 243 ? A -9.581 -19.222 -51.364 1 1 A MET 0.350 1 ATOM 144 C C . MET 243 243 ? A -10.961 -19.862 -51.381 1 1 A MET 0.350 1 ATOM 145 O O . MET 243 243 ? A -11.089 -21.060 -51.588 1 1 A MET 0.350 1 ATOM 146 C CB . MET 243 243 ? A -9.113 -19.277 -49.888 1 1 A MET 0.350 1 ATOM 147 C CG . MET 243 243 ? A -7.637 -18.881 -49.684 1 1 A MET 0.350 1 ATOM 148 S SD . MET 243 243 ? A -6.437 -19.904 -50.599 1 1 A MET 0.350 1 ATOM 149 C CE . MET 243 243 ? A -6.729 -21.467 -49.721 1 1 A MET 0.350 1 ATOM 150 N N . MET 244 244 ? A -12.047 -19.103 -51.114 1 1 A MET 0.300 1 ATOM 151 C CA . MET 244 244 ? A -13.389 -19.663 -51.096 1 1 A MET 0.300 1 ATOM 152 C C . MET 244 244 ? A -13.921 -20.036 -52.467 1 1 A MET 0.300 1 ATOM 153 O O . MET 244 244 ? A -14.640 -21.012 -52.623 1 1 A MET 0.300 1 ATOM 154 C CB . MET 244 244 ? A -14.408 -18.692 -50.463 1 1 A MET 0.300 1 ATOM 155 C CG . MET 244 244 ? A -14.187 -18.450 -48.962 1 1 A MET 0.300 1 ATOM 156 S SD . MET 244 244 ? A -15.265 -17.144 -48.298 1 1 A MET 0.300 1 ATOM 157 C CE . MET 244 244 ? A -16.845 -18.030 -48.411 1 1 A MET 0.300 1 ATOM 158 N N . ALA 245 245 ? A -13.599 -19.217 -53.487 1 1 A ALA 0.290 1 ATOM 159 C CA . ALA 245 245 ? A -14.038 -19.452 -54.838 1 1 A ALA 0.290 1 ATOM 160 C C . ALA 245 245 ? A -12.828 -19.837 -55.662 1 1 A ALA 0.290 1 ATOM 161 O O . ALA 245 245 ? A -11.809 -19.167 -55.618 1 1 A ALA 0.290 1 ATOM 162 C CB . ALA 245 245 ? A -14.649 -18.169 -55.442 1 1 A ALA 0.290 1 ATOM 163 N N . THR 246 246 ? A -12.947 -20.927 -56.452 1 1 A THR 0.300 1 ATOM 164 C CA . THR 246 246 ? A -11.889 -21.398 -57.351 1 1 A THR 0.300 1 ATOM 165 C C . THR 246 246 ? A -10.611 -21.822 -56.650 1 1 A THR 0.300 1 ATOM 166 O O . THR 246 246 ? A -9.548 -21.233 -56.834 1 1 A THR 0.300 1 ATOM 167 C CB . THR 246 246 ? A -11.556 -20.465 -58.505 1 1 A THR 0.300 1 ATOM 168 O OG1 . THR 246 246 ? A -12.735 -19.988 -59.135 1 1 A THR 0.300 1 ATOM 169 C CG2 . THR 246 246 ? A -10.788 -21.203 -59.613 1 1 A THR 0.300 1 ATOM 170 N N . THR 247 247 ? A -10.744 -22.867 -55.814 1 1 A THR 0.280 1 ATOM 171 C CA . THR 247 247 ? A -9.687 -23.493 -55.026 1 1 A THR 0.280 1 ATOM 172 C C . THR 247 247 ? A -8.616 -24.201 -55.900 1 1 A THR 0.280 1 ATOM 173 O O . THR 247 247 ? A -8.922 -24.574 -57.065 1 1 A THR 0.280 1 ATOM 174 C CB . THR 247 247 ? A -10.277 -24.528 -54.056 1 1 A THR 0.280 1 ATOM 175 O OG1 . THR 247 247 ? A -11.355 -23.955 -53.327 1 1 A THR 0.280 1 ATOM 176 C CG2 . THR 247 247 ? A -9.284 -25.078 -53.012 1 1 A THR 0.280 1 ATOM 177 O OXT . THR 247 247 ? A -7.479 -24.406 -55.390 1 1 A THR 0.280 1 # # loop_ _atom_type.symbol C N O S # # loop_ _ma_qa_metric.id _ma_qa_metric.name _ma_qa_metric.description _ma_qa_metric.type _ma_qa_metric.mode _ma_qa_metric.type_other_details _ma_qa_metric.software_group_id 1 QMEANDisCo 'Predicted accuracy according to all-atom lDDT in [0,1].' 'pLDDT all-atom in [0,1]' local . 5 2 QMEANDisCo 'Predicted accuracy according to all-atom lDDT in [0,1].' 'pLDDT all-atom in [0,1]' global . 5 3 GMQE 'Global Model Quality Estimate of the model accuracy, calculated by SWISS-MODEL.' 'normalized score' global . 6 # # loop_ _ma_qa_metric_global.ordinal_id _ma_qa_metric_global.model_id _ma_qa_metric_global.metric_id _ma_qa_metric_global.metric_value 1 1 2 0.550 2 1 3 0.008 # # loop_ _ma_qa_metric_local.ordinal_id _ma_qa_metric_local.model_id _ma_qa_metric_local.label_asym_id _ma_qa_metric_local.label_seq_id _ma_qa_metric_local.label_comp_id _ma_qa_metric_local.metric_id _ma_qa_metric_local.metric_value 1 1 A 223 HIS 1 0.250 2 1 A 224 LEU 1 0.320 3 1 A 225 PHE 1 0.610 4 1 A 226 ILE 1 0.680 5 1 A 227 VAL 1 0.680 6 1 A 228 ALA 1 0.690 7 1 A 229 CYS 1 0.700 8 1 A 230 ALA 1 0.690 9 1 A 231 GLY 1 0.650 10 1 A 232 ALA 1 0.670 11 1 A 233 GLY 1 0.660 12 1 A 234 ALA 1 0.670 13 1 A 235 THR 1 0.650 14 1 A 236 VAL 1 0.670 15 1 A 237 ILE 1 0.670 16 1 A 238 ALA 1 0.660 17 1 A 239 LEU 1 0.620 18 1 A 240 LEU 1 0.640 19 1 A 241 ILE 1 0.580 20 1 A 242 TYR 1 0.480 21 1 A 243 MET 1 0.350 22 1 A 244 MET 1 0.300 23 1 A 245 ALA 1 0.290 24 1 A 246 THR 1 0.300 25 1 A 247 THR 1 0.280 # # loop_ _pdbx_data_usage.id _pdbx_data_usage.type _pdbx_data_usage.details _pdbx_data_usage.url 1 license ;This SWISS-MODEL protein model is copyright. 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