data_SMR-f598d46bebf68c5f0d1fe0c3c1216527_2
_entry.id SMR-f598d46bebf68c5f0d1fe0c3c1216527_2
_struct.entry_id SMR-f598d46bebf68c5f0d1fe0c3c1216527_2
_struct.pdbx_model_details
;This model was generated unsupervised by the SWISS-MODEL homology-modelling pipeline for the SWISS-MODEL Repository, a database of annotated 3D protein structure models. The modelled monomer covers following UniProtKB entries:

  - P51864/ TDGF3_HUMAN, Putative protein CRIPTO3

Estimated model accuracy of this model is 0.049, calculated by SWISS-MODEL as Global Model Quality Estimate (GMQE).
;
_struct.pdbx_structure_determination_methodology computational
_struct.title 'Model for UniProtKB entries P51864'
_audit_conform.dict_location https://raw.githubusercontent.com/ihmwg/ModelCIF/d18ba38/base/mmcif_ma-core.dic
_audit_conform.dict_name mmcif_ma.dic
_audit_conform.dict_version 1.4.6
#
loop_
_citation.id
_citation.title
_citation.journal_abbrev
_citation.journal_volume
_citation.page_first
_citation.page_last
_citation.year
_citation.pdbx_database_id_PubMed
_citation.pdbx_database_id_DOI
primary 'The SWISS-MODEL Repository - new features and functionality'
'Nucleic Acids Res.' 45 D313 D319 2017 27899672 10.1093/nar/gkw1132
2 'SWISS-MODEL: homology modelling of protein structures and complexes'
'Nucleic Acids Res.' 46 W296 W303 2018 29788355 10.1093/nar/gky427
3 'ProMod3 - A versatile homology modelling toolbox' 'PLoS Comput. Biol.' 17(1)
1 18 2021 33507980 10.1371/journal.pcbi.1008667
4 'QMEANDisCo - distance constraints applied on model quality estimation'
Bioinformatics 36 1765 1771 2020 31697312 10.1093/bioinformatics/btz828
5
'OpenStructure: an integrated software framework for computational structural biology'
'Acta Crystallogr., Sect. D: Biol. Crystallogr.' 69 701 709 2013 23633579
10.1107/S0907444913007051
6 'BLAST+: architecture and applications' 'BMC Bioinf.' 10 421 . 2009 20003500
10.1186/1471-2105-10-421
7 'HH-suite3 for fast remote homology detection and deep protein annotation'
'BMC Bioinf.' 20 473 . 2019 31521110 10.1186/s12859-019-3019-7
#
#
loop_
_citation_author.citation_id
_citation_author.name
_citation_author.ordinal
primary 'Bienert, S.' 1
primary 'Waterhouse, A.' 2
primary 'de Beer, T.A.P.' 3
primary 'Tauriello, G.' 4
primary 'Studer, G.' 5
primary 'Bordoli, L.' 6
primary 'Schwede, T.' 7
2 'Waterhouse, A.' 8
2 'Bertoni, M.' 9
2 'Bienert, S.' 10
2 'Studer, G.' 11
2 'Tauriello, G.' 12
2 'Gumienny, R.' 13
2 'Heer, F.T.' 14
2 'de Beer, T.A.P.' 15
2 'Rempfer, C.' 16
2 'Bordoli, L.' 17
2 'Lepore, R.' 18
2 'Schwede, T.' 19
3 'Studer, G.' 20
3 'Tauriello, G.' 21
3 'Bienert, S.' 22
3 'Biasini, M.' 23
3 'Johner, N.' 24
3 'Schwede, T.' 25
4 'Studer, G.' 26
4 'Rempfer, C.' 27
4 'Waterhouse, A.M.' 28
4 'Gumienny, R.' 29
4 'Haas, J.' 30
4 'Schwede, T.' 31
5 'Biasini, M.' 32
5 'Schmidt, T.' 33
5 'Bienert, S.' 34
5 'Mariani, V.' 35
5 'Studer, G.' 36
5 'Haas, J.' 37
5 'Johner, N.' 38
5 'Schenk, A.D.' 39
5 'Philippsen, A.' 40
5 'Schwede, T.' 41
6 'Camacho, C.' 42
6 'Coulouris, G.' 43
6 'Avagyan, V.' 44
6 'Ma, N.' 45
6 'Papadopoulos, J.' 46
6 'Bealer, K.' 47
6 'Madden, T.L.' 48
7 'Steinegger, M.' 49
7 'Meier, M.' 50
7 'Mirdita, M.' 51
7 'Vohringer, H.' 52
7 'Haunsberger, S.J.' 53
7 'Soding, J.' 54
#
#
loop_
_software.pdbx_ordinal
_software.name
_software.classification
_software.description
_software.version
_software.type
_software.location
_software.citation_id
1 SWISS-MODEL 'model building' 'Homology modelling web service'
3ef406dae3f6eb8b74980f2a6e69a2109acde4aa package https://swissmodel.expasy.org 2
2 ProMod3 'model building' 'Modular homology modelling engine' 3.4.1 library
https://git.scicore.unibas.ch/schwede/ProMod3 3
3 QMEAN 'model building' 'QMEAN - Qualitative Model Energy ANalysis' 4.3.1
library https://git.scicore.unibas.ch/schwede/QMEAN 4
4 OpenStructure 'data processing'
'Open-Source Computational Structural Biology Framework' 2.8.0 package
https://openstructure.org/ 5
5 BLAST 'data collection' . 2.2.31 package https://blast.ncbi.nlm.nih.gov 6
6 HH-suite 'data collection' 'HH-suite3 for sensitive sequence searching' 3.2.0
package https://github.com/soedinglab/hh-suite 7
#
#
loop_
_ma_software_group.ordinal_id
_ma_software_group.group_id
_ma_software_group.software_id
_ma_software_group.parameter_group_id
1 1 6 .
2 2 1 .
3 2 4 .
4 2 5 .
5 2 6 .
6 3 1 .
7 3 4 .
8 4 1 .
9 4 2 .
10 4 4 .
11 5 3 .
12 6 1 .
13 6 3 .
14 6 4 .
#
#
loop_
_audit_author.name
_audit_author.pdbx_ordinal
'Bienert, S.' 1
'Waterhouse, A.' 2
'de Beer, T.A.P.' 3
'Tauriello, G.' 4
'Studer, G.' 5
'Bordoli, L.' 6
'Schwede, T.' 7
#
#
loop_
_chem_comp.id
_chem_comp.type
_chem_comp.name
_chem_comp.formula
_chem_comp.formula_weight
_chem_comp.ma_provenance
ALA 'L-peptide linking' ALANINE 'C3 H7 N O2' 89.094 'CCD Core'
ARG 'L-peptide linking' ARGININE 'C6 H15 N4 O2 1' 175.212 'CCD Core'
ASN 'L-peptide linking' ASPARAGINE 'C4 H8 N2 O3' 132.119 'CCD Core'
ASP 'L-peptide linking' 'ASPARTIC ACID' 'C4 H7 N O4' 133.103 'CCD Core'
CYS 'L-peptide linking' CYSTEINE 'C3 H7 N O2 S' 121.154 'CCD Core'
GLN 'L-peptide linking' GLUTAMINE 'C5 H10 N2 O3' 146.146 'CCD Core'
GLU 'L-peptide linking' 'GLUTAMIC ACID' 'C5 H9 N O4' 147.130 'CCD Core'
GLY 'peptide linking' GLYCINE 'C2 H5 N O2' 75.067 'CCD Core'
HIS 'L-peptide linking' HISTIDINE 'C6 H10 N3 O2 1' 156.165 'CCD Core'
ILE 'L-peptide linking' ISOLEUCINE 'C6 H13 N O2' 131.175 'CCD Core'
LEU 'L-peptide linking' LEUCINE 'C6 H13 N O2' 131.175 'CCD Core'
LYS 'L-peptide linking' LYSINE 'C6 H15 N2 O2 1' 147.198 'CCD Core'
MET 'L-peptide linking' METHIONINE 'C5 H11 N O2 S' 149.208 'CCD Core'
PHE 'L-peptide linking' PHENYLALANINE 'C9 H11 N O2' 165.192 'CCD Core'
PRO 'L-peptide linking' PROLINE 'C5 H9 N O2' 115.132 'CCD Core'
SER 'L-peptide linking' SERINE 'C3 H7 N O3' 105.093 'CCD Core'
THR 'L-peptide linking' THREONINE 'C4 H9 N O3' 119.120 'CCD Core'
TRP 'L-peptide linking' TRYPTOPHAN 'C11 H12 N2 O2' 204.229 'CCD Core'
TYR 'L-peptide linking' TYROSINE 'C9 H11 N O3' 181.191 'CCD Core'
VAL 'L-peptide linking' VALINE 'C5 H11 N O2' 117.148 'CCD Core'
#
#
loop_
_entity.id
_entity.type
_entity.src_method
_entity.pdbx_description
_entity.formula_weight
_entity.pdbx_number_of_molecules
_entity.details
1 polymer man . 24576.626 1 .
#
#
loop_
_struct_ref.id
_struct_ref.entity_id
_struct_ref.db_name
_struct_ref.db_code
_struct_ref.pdbx_db_accession
_struct_ref.pdbx_align_begin
_struct_ref.pdbx_seq_one_letter_code
_struct_ref.details
1 1 UNP TDGF3_HUMAN P51864 1
;MDCRKMVRFSYSVIWIMAISKAFELGLVAGLGHQEFARPSRGDLAFRDDSIWPQEEPAIRPRSSQRVLPM
GIQHSKELNRTCCLNGGTCMLESFCACPPSFYGRNCEHDVRKENCGSVPHDTWLPKKCSLCKCWHGQLRC
FPQAFLPGCDGLVMDEHLVASRTPELPPSARTTTFMLAGICLSIQSYY
;
'Putative protein CRIPTO3'
#
#
loop_
_struct_ref_seq.align_id
_struct_ref_seq.ref_id
_struct_ref_seq.seq_align_beg
_struct_ref_seq.seq_align_end
_struct_ref_seq.db_align_beg
_struct_ref_seq.db_align_end
1 1 1 188 1 188
#
#
loop_
_ma_target_ref_db_details.target_entity_id
_ma_target_ref_db_details.db_name
_ma_target_ref_db_details.db_name_other_details
_ma_target_ref_db_details.db_code
_ma_target_ref_db_details.db_accession
_ma_target_ref_db_details.seq_db_isoform
_ma_target_ref_db_details.seq_db_align_begin
_ma_target_ref_db_details.seq_db_align_end
_ma_target_ref_db_details.ncbi_taxonomy_id
_ma_target_ref_db_details.organism_scientific
_ma_target_ref_db_details.seq_db_sequence_version_date
_ma_target_ref_db_details.seq_db_sequence_checksum
1 UNP . TDGF3_HUMAN P51864 . 1 188 9606 'Homo sapiens (Human)' 1996-10-01
C07AC973E4D82B32
#
#
loop_
_entity_poly.entity_id
_entity_poly.type
_entity_poly.nstd_linkage
_entity_poly.nstd_monomer
_entity_poly.pdbx_strand_id
_entity_poly.pdbx_seq_one_letter_code
_entity_poly.pdbx_seq_one_letter_code_can
1 polypeptide(L) no no A
;MDCRKMVRFSYSVIWIMAISKAFELGLVAGLGHQEFARPSRGDLAFRDDSIWPQEEPAIRPRSSQRVLPM
GIQHSKELNRTCCLNGGTCMLESFCACPPSFYGRNCEHDVRKENCGSVPHDTWLPKKCSLCKCWHGQLRC
FPQAFLPGCDGLVMDEHLVASRTPELPPSARTTTFMLAGICLSIQSYY
;

;MDCRKMVRFSYSVIWIMAISKAFELGLVAGLGHQEFARPSRGDLAFRDDSIWPQEEPAIRPRSSQRVLPM
GIQHSKELNRTCCLNGGTCMLESFCACPPSFYGRNCEHDVRKENCGSVPHDTWLPKKCSLCKCWHGQLRC
FPQAFLPGCDGLVMDEHLVASRTPELPPSARTTTFMLAGICLSIQSYY
;

#
#
loop_
_entity_poly_seq.entity_id
_entity_poly_seq.num
_entity_poly_seq.mon_id
_entity_poly_seq.hetero
1 1 MET .
1 2 ASP .
1 3 CYS .
1 4 ARG .
1 5 LYS .
1 6 MET .
1 7 VAL .
1 8 ARG .
1 9 PHE .
1 10 SER .
1 11 TYR .
1 12 SER .
1 13 VAL .
1 14 ILE .
1 15 TRP .
1 16 ILE .
1 17 MET .
1 18 ALA .
1 19 ILE .
1 20 SER .
1 21 LYS .
1 22 ALA .
1 23 PHE .
1 24 GLU .
1 25 LEU .
1 26 GLY .
1 27 LEU .
1 28 VAL .
1 29 ALA .
1 30 GLY .
1 31 LEU .
1 32 GLY .
1 33 HIS .
1 34 GLN .
1 35 GLU .
1 36 PHE .
1 37 ALA .
1 38 ARG .
1 39 PRO .
1 40 SER .
1 41 ARG .
1 42 GLY .
1 43 ASP .
1 44 LEU .
1 45 ALA .
1 46 PHE .
1 47 ARG .
1 48 ASP .
1 49 ASP .
1 50 SER .
1 51 ILE .
1 52 TRP .
1 53 PRO .
1 54 GLN .
1 55 GLU .
1 56 GLU .
1 57 PRO .
1 58 ALA .
1 59 ILE .
1 60 ARG .
1 61 PRO .
1 62 ARG .
1 63 SER .
1 64 SER .
1 65 GLN .
1 66 ARG .
1 67 VAL .
1 68 LEU .
1 69 PRO .
1 70 MET .
1 71 GLY .
1 72 ILE .
1 73 GLN .
1 74 HIS .
1 75 SER .
1 76 LYS .
1 77 GLU .
1 78 LEU .
1 79 ASN .
1 80 ARG .
1 81 THR .
1 82 CYS .
1 83 CYS .
1 84 LEU .
1 85 ASN .
1 86 GLY .
1 87 GLY .
1 88 THR .
1 89 CYS .
1 90 MET .
1 91 LEU .
1 92 GLU .
1 93 SER .
1 94 PHE .
1 95 CYS .
1 96 ALA .
1 97 CYS .
1 98 PRO .
1 99 PRO .
1 100 SER .
1 101 PHE .
1 102 TYR .
1 103 GLY .
1 104 ARG .
1 105 ASN .
1 106 CYS .
1 107 GLU .
1 108 HIS .
1 109 ASP .
1 110 VAL .
1 111 ARG .
1 112 LYS .
1 113 GLU .
1 114 ASN .
1 115 CYS .
1 116 GLY .
1 117 SER .
1 118 VAL .
1 119 PRO .
1 120 HIS .
1 121 ASP .
1 122 THR .
1 123 TRP .
1 124 LEU .
1 125 PRO .
1 126 LYS .
1 127 LYS .
1 128 CYS .
1 129 SER .
1 130 LEU .
1 131 CYS .
1 132 LYS .
1 133 CYS .
1 134 TRP .
1 135 HIS .
1 136 GLY .
1 137 GLN .
1 138 LEU .
1 139 ARG .
1 140 CYS .
1 141 PHE .
1 142 PRO .
1 143 GLN .
1 144 ALA .
1 145 PHE .
1 146 LEU .
1 147 PRO .
1 148 GLY .
1 149 CYS .
1 150 ASP .
1 151 GLY .
1 152 LEU .
1 153 VAL .
1 154 MET .
1 155 ASP .
1 156 GLU .
1 157 HIS .
1 158 LEU .
1 159 VAL .
1 160 ALA .
1 161 SER .
1 162 ARG .
1 163 THR .
1 164 PRO .
1 165 GLU .
1 166 LEU .
1 167 PRO .
1 168 PRO .
1 169 SER .
1 170 ALA .
1 171 ARG .
1 172 THR .
1 173 THR .
1 174 THR .
1 175 PHE .
1 176 MET .
1 177 LEU .
1 178 ALA .
1 179 GLY .
1 180 ILE .
1 181 CYS .
1 182 LEU .
1 183 SER .
1 184 ILE .
1 185 GLN .
1 186 SER .
1 187 TYR .
1 188 TYR .
#
#
loop_
_struct_asym.id
_struct_asym.entity_id
_struct_asym.details
A 1 .
#
#
loop_
_pdbx_poly_seq_scheme.asym_id
_pdbx_poly_seq_scheme.entity_id
_pdbx_poly_seq_scheme.seq_id
_pdbx_poly_seq_scheme.mon_id
_pdbx_poly_seq_scheme.pdb_seq_num
_pdbx_poly_seq_scheme.auth_seq_num
_pdbx_poly_seq_scheme.pdb_mon_id
_pdbx_poly_seq_scheme.auth_mon_id
_pdbx_poly_seq_scheme.pdb_strand_id
_pdbx_poly_seq_scheme.pdb_ins_code
A 1 1 MET 1 ? ? ? A .
A 1 2 ASP 2 ? ? ? A .
A 1 3 CYS 3 ? ? ? A .
A 1 4 ARG 4 ? ? ? A .
A 1 5 LYS 5 ? ? ? A .
A 1 6 MET 6 ? ? ? A .
A 1 7 VAL 7 ? ? ? A .
A 1 8 ARG 8 ? ? ? A .
A 1 9 PHE 9 ? ? ? A .
A 1 10 SER 10 ? ? ? A .
A 1 11 TYR 11 ? ? ? A .
A 1 12 SER 12 ? ? ? A .
A 1 13 VAL 13 ? ? ? A .
A 1 14 ILE 14 ? ? ? A .
A 1 15 TRP 15 ? ? ? A .
A 1 16 ILE 16 ? ? ? A .
A 1 17 MET 17 ? ? ? A .
A 1 18 ALA 18 ? ? ? A .
A 1 19 ILE 19 ? ? ? A .
A 1 20 SER 20 ? ? ? A .
A 1 21 LYS 21 ? ? ? A .
A 1 22 ALA 22 ? ? ? A .
A 1 23 PHE 23 ? ? ? A .
A 1 24 GLU 24 ? ? ? A .
A 1 25 LEU 25 ? ? ? A .
A 1 26 GLY 26 ? ? ? A .
A 1 27 LEU 27 ? ? ? A .
A 1 28 VAL 28 ? ? ? A .
A 1 29 ALA 29 ? ? ? A .
A 1 30 GLY 30 ? ? ? A .
A 1 31 LEU 31 ? ? ? A .
A 1 32 GLY 32 ? ? ? A .
A 1 33 HIS 33 ? ? ? A .
A 1 34 GLN 34 ? ? ? A .
A 1 35 GLU 35 ? ? ? A .
A 1 36 PHE 36 ? ? ? A .
A 1 37 ALA 37 ? ? ? A .
A 1 38 ARG 38 ? ? ? A .
A 1 39 PRO 39 ? ? ? A .
A 1 40 SER 40 ? ? ? A .
A 1 41 ARG 41 ? ? ? A .
A 1 42 GLY 42 ? ? ? A .
A 1 43 ASP 43 ? ? ? A .
A 1 44 LEU 44 ? ? ? A .
A 1 45 ALA 45 ? ? ? A .
A 1 46 PHE 46 ? ? ? A .
A 1 47 ARG 47 ? ? ? A .
A 1 48 ASP 48 ? ? ? A .
A 1 49 ASP 49 ? ? ? A .
A 1 50 SER 50 ? ? ? A .
A 1 51 ILE 51 ? ? ? A .
A 1 52 TRP 52 ? ? ? A .
A 1 53 PRO 53 ? ? ? A .
A 1 54 GLN 54 ? ? ? A .
A 1 55 GLU 55 ? ? ? A .
A 1 56 GLU 56 ? ? ? A .
A 1 57 PRO 57 ? ? ? A .
A 1 58 ALA 58 ? ? ? A .
A 1 59 ILE 59 ? ? ? A .
A 1 60 ARG 60 ? ? ? A .
A 1 61 PRO 61 ? ? ? A .
A 1 62 ARG 62 ? ? ? A .
A 1 63 SER 63 ? ? ? A .
A 1 64 SER 64 ? ? ? A .
A 1 65 GLN 65 ? ? ? A .
A 1 66 ARG 66 ? ? ? A .
A 1 67 VAL 67 ? ? ? A .
A 1 68 LEU 68 ? ? ? A .
A 1 69 PRO 69 ? ? ? A .
A 1 70 MET 70 ? ? ? A .
A 1 71 GLY 71 ? ? ? A .
A 1 72 ILE 72 ? ? ? A .
A 1 73 GLN 73 ? ? ? A .
A 1 74 HIS 74 ? ? ? A .
A 1 75 SER 75 ? ? ? A .
A 1 76 LYS 76 ? ? ? A .
A 1 77 GLU 77 ? ? ? A .
A 1 78 LEU 78 ? ? ? A .
A 1 79 ASN 79 ? ? ? A .
A 1 80 ARG 80 ? ? ? A .
A 1 81 THR 81 81 THR THR A .
A 1 82 CYS 82 82 CYS CYS A .
A 1 83 CYS 83 83 CYS CYS A .
A 1 84 LEU 84 84 LEU LEU A .
A 1 85 ASN 85 85 ASN ASN A .
A 1 86 GLY 86 86 GLY GLY A .
A 1 87 GLY 87 87 GLY GLY A .
A 1 88 THR 88 88 THR THR A .
A 1 89 CYS 89 89 CYS CYS A .
A 1 90 MET 90 90 MET MET A .
A 1 91 LEU 91 91 LEU LEU A .
A 1 92 GLU 92 92 GLU GLU A .
A 1 93 SER 93 93 SER SER A .
A 1 94 PHE 94 94 PHE PHE A .
A 1 95 CYS 95 95 CYS CYS A .
A 1 96 ALA 96 96 ALA ALA A .
A 1 97 CYS 97 97 CYS CYS A .
A 1 98 PRO 98 98 PRO PRO A .
A 1 99 PRO 99 99 PRO PRO A .
A 1 100 SER 100 100 SER SER A .
A 1 101 PHE 101 101 PHE PHE A .
A 1 102 TYR 102 102 TYR TYR A .
A 1 103 GLY 103 103 GLY GLY A .
A 1 104 ARG 104 104 ARG ARG A .
A 1 105 ASN 105 105 ASN ASN A .
A 1 106 CYS 106 106 CYS CYS A .
A 1 107 GLU 107 107 GLU GLU A .
A 1 108 HIS 108 108 HIS HIS A .
A 1 109 ASP 109 109 ASP ASP A .
A 1 110 VAL 110 ? ? ? A .
A 1 111 ARG 111 ? ? ? A .
A 1 112 LYS 112 ? ? ? A .
A 1 113 GLU 113 ? ? ? A .
A 1 114 ASN 114 ? ? ? A .
A 1 115 CYS 115 ? ? ? A .
A 1 116 GLY 116 ? ? ? A .
A 1 117 SER 117 ? ? ? A .
A 1 118 VAL 118 ? ? ? A .
A 1 119 PRO 119 ? ? ? A .
A 1 120 HIS 120 ? ? ? A .
A 1 121 ASP 121 ? ? ? A .
A 1 122 THR 122 ? ? ? A .
A 1 123 TRP 123 ? ? ? A .
A 1 124 LEU 124 ? ? ? A .
A 1 125 PRO 125 ? ? ? A .
A 1 126 LYS 126 ? ? ? A .
A 1 127 LYS 127 ? ? ? A .
A 1 128 CYS 128 ? ? ? A .
A 1 129 SER 129 ? ? ? A .
A 1 130 LEU 130 ? ? ? A .
A 1 131 CYS 131 ? ? ? A .
A 1 132 LYS 132 ? ? ? A .
A 1 133 CYS 133 ? ? ? A .
A 1 134 TRP 134 ? ? ? A .
A 1 135 HIS 135 ? ? ? A .
A 1 136 GLY 136 ? ? ? A .
A 1 137 GLN 137 ? ? ? A .
A 1 138 LEU 138 ? ? ? A .
A 1 139 ARG 139 ? ? ? A .
A 1 140 CYS 140 ? ? ? A .
A 1 141 PHE 141 ? ? ? A .
A 1 142 PRO 142 ? ? ? A .
A 1 143 GLN 143 ? ? ? A .
A 1 144 ALA 144 ? ? ? A .
A 1 145 PHE 145 ? ? ? A .
A 1 146 LEU 146 ? ? ? A .
A 1 147 PRO 147 ? ? ? A .
A 1 148 GLY 148 ? ? ? A .
A 1 149 CYS 149 ? ? ? A .
A 1 150 ASP 150 ? ? ? A .
A 1 151 GLY 151 ? ? ? A .
A 1 152 LEU 152 ? ? ? A .
A 1 153 VAL 153 ? ? ? A .
A 1 154 MET 154 ? ? ? A .
A 1 155 ASP 155 ? ? ? A .
A 1 156 GLU 156 ? ? ? A .
A 1 157 HIS 157 ? ? ? A .
A 1 158 LEU 158 ? ? ? A .
A 1 159 VAL 159 ? ? ? A .
A 1 160 ALA 160 ? ? ? A .
A 1 161 SER 161 ? ? ? A .
A 1 162 ARG 162 ? ? ? A .
A 1 163 THR 163 ? ? ? A .
A 1 164 PRO 164 ? ? ? A .
A 1 165 GLU 165 ? ? ? A .
A 1 166 LEU 166 ? ? ? A .
A 1 167 PRO 167 ? ? ? A .
A 1 168 PRO 168 ? ? ? A .
A 1 169 SER 169 ? ? ? A .
A 1 170 ALA 170 ? ? ? A .
A 1 171 ARG 171 ? ? ? A .
A 1 172 THR 172 ? ? ? A .
A 1 173 THR 173 ? ? ? A .
A 1 174 THR 174 ? ? ? A .
A 1 175 PHE 175 ? ? ? A .
A 1 176 MET 176 ? ? ? A .
A 1 177 LEU 177 ? ? ? A .
A 1 178 ALA 178 ? ? ? A .
A 1 179 GLY 179 ? ? ? A .
A 1 180 ILE 180 ? ? ? A .
A 1 181 CYS 181 ? ? ? A .
A 1 182 LEU 182 ? ? ? A .
A 1 183 SER 183 ? ? ? A .
A 1 184 ILE 184 ? ? ? A .
A 1 185 GLN 185 ? ? ? A .
A 1 186 SER 186 ? ? ? A .
A 1 187 TYR 187 ? ? ? A .
A 1 188 TYR 188 ? ? ? A .
#
#
loop_
_ma_data.id
_ma_data.name
_ma_data.content_type
_ma_data.content_type_other_details
1
'PLASMINOGEN ACTIVATOR {PDB ID=1urk, label_asym_id=A, auth_asym_id=A, SMTL ID=1urk.1.A}'
'template structure' .
2 . target .
3 'Target-template alignment by HHblits to 1urk, label_asym_id=A'
'target-template alignment' .
4 'model 2' 'model coordinates' .
5 SMTL 'reference database' .
6 PDB 'reference database' .
7 'Template search output' other 'Results of the sequence search'
#
#
loop_
_ma_data_group.ordinal_id
_ma_data_group.group_id
_ma_data_group.data_id
1 1 2
2 1 5
3 1 6
4 2 7
5 3 2
6 3 1
7 3 3
8 4 1
9 4 3
10 5 4
#
#
loop_
_ma_data_ref_db.data_id
_ma_data_ref_db.name
_ma_data_ref_db.location_url
_ma_data_ref_db.version
_ma_data_ref_db.release_date
5 SMTL https://swissmodel.expasy.org/templates/ . 2025-02-19
6 PDB https://www.wwpdb.org . 2025-02-14
#
#
loop_
_ma_target_entity.entity_id
_ma_target_entity.data_id
_ma_target_entity.origin
1 2 'reference database'
#
#
loop_
_ma_target_entity_instance.asym_id
_ma_target_entity_instance.entity_id
_ma_target_entity_instance.details
A 1 .
#
#
loop_
_ma_template_trans_matrix.id
_ma_template_trans_matrix.rot_matrix[1][1]
_ma_template_trans_matrix.rot_matrix[2][1]
_ma_template_trans_matrix.rot_matrix[3][1]
_ma_template_trans_matrix.rot_matrix[1][2]
_ma_template_trans_matrix.rot_matrix[2][2]
_ma_template_trans_matrix.rot_matrix[3][2]
_ma_template_trans_matrix.rot_matrix[1][3]
_ma_template_trans_matrix.rot_matrix[2][3]
_ma_template_trans_matrix.rot_matrix[3][3]
_ma_template_trans_matrix.tr_vector[1]
_ma_template_trans_matrix.tr_vector[2]
_ma_template_trans_matrix.tr_vector[3]
1 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000
1.000000 0 0 0
#
#
loop_
_ma_template_details.ordinal_id
_ma_template_details.template_id
_ma_template_details.template_origin
_ma_template_details.template_entity_type
_ma_template_details.template_trans_matrix_id
_ma_template_details.template_data_id
_ma_template_details.target_asym_id
_ma_template_details.template_label_asym_id
_ma_template_details.template_label_entity_id
_ma_template_details.template_model_num
_ma_template_details.template_auth_asym_id
1 1 'reference database' polymer 1 1 A A 1 1 A
#
#
loop_
_ma_template_poly.template_id
_ma_template_poly.seq_one_letter_code
_ma_template_poly.seq_one_letter_code_can
1
;QVPSNCDCLNGGTCVSNKYFSNIHWCNCPKKFGGQHCEIDKSKTCYEGNGHFYRGKASTDTMGRPCLPWN
SATVLQQTYHAHRSDALQLGLGKHNYCRNPDNRRRPWCYVQVGLKPLVQECMVHDCADGK
;

;QVPSNCDCLNGGTCVSNKYFSNIHWCNCPKKFGGQHCEIDKSKTCYEGNGHFYRGKASTDTMGRPCLPWN
SATVLQQTYHAHRSDALQLGLGKHNYCRNPDNRRRPWCYVQVGLKPLVQECMVHDCADGK
;

#
#
loop_
_ma_template_poly_segment.id
_ma_template_poly_segment.template_id
_ma_template_poly_segment.residue_number_begin
_ma_template_poly_segment.residue_number_end
1 1 6 40
#
#
loop_
_ma_template_ref_db_details.template_id
_ma_template_ref_db_details.db_name
_ma_template_ref_db_details.db_name_other_details
_ma_template_ref_db_details.db_accession_code
_ma_template_ref_db_details.db_version_date
1 PDB . 1urk 2024-10-23
#
#
loop_
_ma_target_template_poly_mapping.id
_ma_target_template_poly_mapping.template_segment_id
_ma_target_template_poly_mapping.target_asym_id
_ma_target_template_poly_mapping.target_seq_id_begin
_ma_target_template_poly_mapping.target_seq_id_end
1 1 A 1 188
#
#
loop_
_ma_alignment_info.alignment_id
_ma_alignment_info.data_id
_ma_alignment_info.software_group_id
_ma_alignment_info.alignment_length
_ma_alignment_info.alignment_type
_ma_alignment_info.alignment_mode
1 3 1 194 'target-template pairwise alignment' local
#
#
loop_
_ma_alignment_details.ordinal_id
_ma_alignment_details.alignment_id
_ma_alignment_details.template_segment_id
_ma_alignment_details.target_asym_id
_ma_alignment_details.score_type
_ma_alignment_details.score_type_other_details
_ma_alignment_details.score_value
_ma_alignment_details.percent_sequence_identity
_ma_alignment_details.sequence_identity_denominator
_ma_alignment_details.sequence_identity_denominator_other_details
1 1 1 A 'HHblits e-value' . 0.00046 51.724
'Number of aligned residue pairs (not including the gaps)' .
#
#
loop_
_ma_alignment.ordinal_id
_ma_alignment.alignment_id
_ma_alignment.target_template_flag
_ma_alignment.sequence
1 1 1
MDCRKMVRFSYSVIWIMAISKAFELGLVAGLGHQEFARPSRGDLAFRDDSIWPQEEPAIRPRSSQRVLPMGIQHSKELNRTCCLNGGTCMLE------SFCACPPSFYGRNCEHDVRKENCGSVPHDTWLPKKCSLCKCWHGQLRCFPQAFLPGCDGLVMDEHLVASRTPELPPSARTTTFMLAGICLSIQSYY
2 1 2
--------------------------------------------------------------------------------CDCLNGGTCVSNKYFSNIHWCNCPKKFGGQHCEID-------------------------------------------------------------------------------
#
#
loop_
_ma_protocol_step.ordinal_id
_ma_protocol_step.protocol_id
_ma_protocol_step.step_id
_ma_protocol_step.method_type
_ma_protocol_step.step_name
_ma_protocol_step.details
_ma_protocol_step.software_group_id
_ma_protocol_step.input_data_group_id
_ma_protocol_step.output_data_group_id
1 1 1 'template search' 'template search' 'SWISS-MODEL template search in PDB' 2
1 2
2 1 2 'template selection' 'template selection'
'Automatic template selection by SWISS-MODEL' 3 2 4
3 1 3 modeling 'homology modeling'
'SWISS-MODEL auto-model mode using ProMod3 on 1urk.1' 4 3 5
#
#
loop_
_ma_model_list.ordinal_id
_ma_model_list.model_id
_ma_model_list.model_group_id
_ma_model_list.model_name
_ma_model_list.model_group_name
_ma_model_list.data_id
_ma_model_list.model_type
_ma_model_list.model_type_other_details
1 1 1 'model 2' . 4 'Homology model' .
#
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_alt_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.auth_seq_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.label_entity_id
_atom_site.auth_asym_id
_atom_site.auth_comp_id
_atom_site.B_iso_or_equiv
_atom_site.pdbx_PDB_model_num
ATOM 1 N N . THR 81 81 ? A -0.226 20.994 -1.161 1 1 A THR 0.410 1
ATOM 2 C CA . THR 81 81 ? A -0.096 19.591 -0.594 1 1 A THR 0.410 1
ATOM 3 C C . THR 81 81 ? A -1.267 19.349 0.302 1 1 A THR 0.410 1
ATOM 4 O O . THR 81 81 ? A -1.964 20.310 0.624 1 1 A THR 0.410 1
ATOM 5 C CB . THR 81 81 ? A 1.148 19.435 0.295 1 1 A THR 0.410 1
ATOM 6 O OG1 . THR 81 81 ? A 1.157 20.382 1.346 1 1 A THR 0.410 1
ATOM 7 C CG2 . THR 81 81 ? A 2.418 19.783 -0.445 1 1 A THR 0.410 1
ATOM 8 N N . CYS 82 82 ? A -1.503 18.116 0.759 1 1 A CYS 0.540 1
ATOM 9 C CA . CYS 82 82 ? A -2.569 17.872 1.692 1 1 A CYS 0.540 1
ATOM 10 C C . CYS 82 82 ? A -2.436 16.411 1.969 1 1 A CYS 0.540 1
ATOM 11 O O . CYS 82 82 ? A -2.831 15.622 1.116 1 1 A CYS 0.540 1
ATOM 12 C CB . CYS 82 82 ? A -3.996 18.131 1.106 1 1 A CYS 0.540 1
ATOM 13 S SG . CYS 82 82 ? A -5.289 18.167 2.378 1 1 A CYS 0.540 1
ATOM 14 N N . CYS 83 83 ? A -1.819 16.015 3.097 1 1 A CYS 0.550 1
ATOM 15 C CA . CYS 83 83 ? A -1.693 14.633 3.522 1 1 A CYS 0.550 1
ATOM 16 C C . CYS 83 83 ? A -2.366 14.488 4.887 1 1 A CYS 0.550 1
ATOM 17 O O . CYS 83 83 ? A -3.036 15.416 5.348 1 1 A CYS 0.550 1
ATOM 18 C CB . CYS 83 83 ? A -0.238 14.103 3.550 1 1 A CYS 0.550 1
ATOM 19 S SG . CYS 83 83 ? A 0.636 14.359 1.980 1 1 A CYS 0.550 1
ATOM 20 N N . LEU 84 84 ? A -2.243 13.339 5.574 1 1 A LEU 0.540 1
ATOM 21 C CA . LEU 84 84 ? A -2.916 13.026 6.812 1 1 A LEU 0.540 1
ATOM 22 C C . LEU 84 84 ? A -2.009 12.060 7.527 1 1 A LEU 0.540 1
ATOM 23 O O . LEU 84 84 ? A -0.934 11.734 7.018 1 1 A LEU 0.540 1
ATOM 24 C CB . LEU 84 84 ? A -4.280 12.330 6.566 1 1 A LEU 0.540 1
ATOM 25 C CG . LEU 84 84 ? A -5.542 13.213 6.561 1 1 A LEU 0.540 1
ATOM 26 C CD1 . LEU 84 84 ? A -6.525 12.809 5.459 1 1 A LEU 0.540 1
ATOM 27 C CD2 . LEU 84 84 ? A -6.262 13.092 7.915 1 1 A LEU 0.540 1
ATOM 28 N N . ASN 85 85 ? A -2.364 11.650 8.763 1 1 A ASN 0.560 1
ATOM 29 C CA . ASN 85 85 ? A -1.579 10.818 9.664 1 1 A ASN 0.560 1
ATOM 30 C C . ASN 85 85 ? A -0.217 11.391 9.996 1 1 A ASN 0.560 1
ATOM 31 O O . ASN 85 85 ? A 0.720 10.678 10.321 1 1 A ASN 0.560 1
ATOM 32 C CB . ASN 85 85 ? A -1.478 9.349 9.173 1 1 A ASN 0.560 1
ATOM 33 C CG . ASN 85 85 ? A -2.708 8.623 9.680 1 1 A ASN 0.560 1
ATOM 34 O OD1 . ASN 85 85 ? A -3.776 9.204 9.780 1 1 A ASN 0.560 1
ATOM 35 N ND2 . ASN 85 85 ? A -2.522 7.336 10.061 1 1 A ASN 0.560 1
ATOM 36 N N . GLY 86 86 ? A -0.100 12.736 9.935 1 1 A GLY 0.570 1
ATOM 37 C CA . GLY 86 86 ? A 1.198 13.385 9.994 1 1 A GLY 0.570 1
ATOM 38 C C . GLY 86 86 ? A 2.019 13.164 8.751 1 1 A GLY 0.570 1
ATOM 39 O O . GLY 86 86 ? A 3.213 12.916 8.826 1 1 A GLY 0.570 1
ATOM 40 N N . GLY 87 87 ? A 1.380 13.214 7.562 1 1 A GLY 0.570 1
ATOM 41 C CA . GLY 87 87 ? A 2.057 13.232 6.280 1 1 A GLY 0.570 1
ATOM 42 C C . GLY 87 87 ? A 2.852 14.482 6.018 1 1 A GLY 0.570 1
ATOM 43 O O . GLY 87 87 ? A 2.870 15.412 6.827 1 1 A GLY 0.570 1
ATOM 44 N N . THR 88 88 ? A 3.512 14.581 4.856 1 1 A THR 0.520 1
ATOM 45 C CA . THR 88 88 ? A 4.515 15.612 4.646 1 1 A THR 0.520 1
ATOM 46 C C . THR 88 88 ? A 4.035 16.578 3.597 1 1 A THR 0.520 1
ATOM 47 O O . THR 88 88 ? A 3.439 16.236 2.569 1 1 A THR 0.520 1
ATOM 48 C CB . THR 88 88 ? A 5.920 15.085 4.328 1 1 A THR 0.520 1
ATOM 49 O OG1 . THR 88 88 ? A 6.417 14.327 5.412 1 1 A THR 0.520 1
ATOM 50 C CG2 . THR 88 88 ? A 6.964 16.184 4.111 1 1 A THR 0.520 1
ATOM 51 N N . CYS 89 89 ? A 4.280 17.867 3.858 1 1 A CYS 0.470 1
ATOM 52 C CA . CYS 89 89 ? A 3.984 18.958 2.975 1 1 A CYS 0.470 1
ATOM 53 C C . CYS 89 89 ? A 5.310 19.453 2.453 1 1 A CYS 0.470 1
ATOM 54 O O . CYS 89 89 ? A 6.195 19.820 3.231 1 1 A CYS 0.470 1
ATOM 55 C CB . CYS 89 89 ? A 3.204 20.072 3.729 1 1 A CYS 0.470 1
ATOM 56 S SG . CYS 89 89 ? A 1.612 19.432 4.365 1 1 A CYS 0.470 1
ATOM 57 N N . MET 90 90 ? A 5.497 19.417 1.125 1 1 A MET 0.380 1
ATOM 58 C CA . MET 90 90 ? A 6.724 19.690 0.429 1 1 A MET 0.380 1
ATOM 59 C C . MET 90 90 ? A 6.489 20.757 -0.599 1 1 A MET 0.380 1
ATOM 60 O O . MET 90 90 ? A 5.332 21.063 -0.938 1 1 A MET 0.380 1
ATOM 61 C CB . MET 90 90 ? A 7.209 18.428 -0.321 1 1 A MET 0.380 1
ATOM 62 C CG . MET 90 90 ? A 7.461 17.264 0.643 1 1 A MET 0.380 1
ATOM 63 S SD . MET 90 90 ? A 8.489 15.925 -0.037 1 1 A MET 0.380 1
ATOM 64 C CE . MET 90 90 ? A 10.054 16.832 0.061 1 1 A MET 0.380 1
ATOM 65 N N . LEU 91 91 ? A 7.581 21.317 -1.139 1 1 A LEU 0.250 1
ATOM 66 C CA . LEU 91 91 ? A 7.635 22.351 -2.153 1 1 A LEU 0.250 1
ATOM 67 C C . LEU 91 91 ? A 6.880 21.968 -3.424 1 1 A LEU 0.250 1
ATOM 68 O O . LEU 91 91 ? A 6.162 22.785 -4.001 1 1 A LEU 0.250 1
ATOM 69 C CB . LEU 91 91 ? A 9.116 22.589 -2.553 1 1 A LEU 0.250 1
ATOM 70 C CG . LEU 91 91 ? A 9.313 23.591 -3.716 1 1 A LEU 0.250 1
ATOM 71 C CD1 . LEU 91 91 ? A 8.769 24.991 -3.367 1 1 A LEU 0.250 1
ATOM 72 C CD2 . LEU 91 91 ? A 10.787 23.637 -4.145 1 1 A LEU 0.250 1
ATOM 73 N N . GLU 92 92 ? A 7.010 20.699 -3.868 1 1 A GLU 0.210 1
ATOM 74 C CA . GLU 92 92 ? A 6.461 20.133 -5.092 1 1 A GLU 0.210 1
ATOM 75 C C . GLU 92 92 ? A 4.956 20.047 -5.124 1 1 A GLU 0.210 1
ATOM 76 O O . GLU 92 92 ? A 4.353 19.716 -6.157 1 1 A GLU 0.210 1
ATOM 77 C CB . GLU 92 92 ? A 6.972 18.679 -5.299 1 1 A GLU 0.210 1
ATOM 78 C CG . GLU 92 92 ? A 8.494 18.583 -5.566 1 1 A GLU 0.210 1
ATOM 79 C CD . GLU 92 92 ? A 9.384 18.667 -4.327 1 1 A GLU 0.210 1
ATOM 80 O OE1 . GLU 92 92 ? A 10.623 18.645 -4.521 1 1 A GLU 0.210 1
ATOM 81 O OE2 . GLU 92 92 ? A 8.849 18.796 -3.193 1 1 A GLU 0.210 1
ATOM 82 N N . SER 93 93 ? A 4.291 20.265 -3.989 1 1 A SER 0.400 1
ATOM 83 C CA . SER 93 93 ? A 2.842 20.296 -3.837 1 1 A SER 0.400 1
ATOM 84 C C . SER 93 93 ? A 2.178 18.948 -3.899 1 1 A SER 0.400 1
ATOM 85 O O . SER 93 93 ? A 1.003 18.831 -3.538 1 1 A SER 0.400 1
ATOM 86 C CB . SER 93 93 ? A 2.017 21.252 -4.735 1 1 A SER 0.400 1
ATOM 87 O OG . SER 93 93 ? A 2.234 22.609 -4.374 1 1 A SER 0.400 1
ATOM 88 N N . PHE 94 94 ? A 2.922 17.898 -4.276 1 1 A PHE 0.320 1
ATOM 89 C CA . PHE 94 94 ? A 2.532 16.521 -4.297 1 1 A PHE 0.320 1
ATOM 90 C C . PHE 94 94 ? A 2.545 16.011 -2.862 1 1 A PHE 0.320 1
ATOM 91 O O . PHE 94 94 ? A 3.454 16.304 -2.103 1 1 A PHE 0.320 1
ATOM 92 C CB . PHE 94 94 ? A 3.533 15.748 -5.210 1 1 A PHE 0.320 1
ATOM 93 C CG . PHE 94 94 ? A 3.089 14.337 -5.466 1 1 A PHE 0.320 1
ATOM 94 C CD1 . PHE 94 94 ? A 3.750 13.261 -4.855 1 1 A PHE 0.320 1
ATOM 95 C CD2 . PHE 94 94 ? A 2.006 14.076 -6.320 1 1 A PHE 0.320 1
ATOM 96 C CE1 . PHE 94 94 ? A 3.358 11.942 -5.117 1 1 A PHE 0.320 1
ATOM 97 C CE2 . PHE 94 94 ? A 1.608 12.759 -6.583 1 1 A PHE 0.320 1
ATOM 98 C CZ . PHE 94 94 ? A 2.292 11.691 -5.989 1 1 A PHE 0.320 1
ATOM 99 N N . CYS 95 95 ? A 1.475 15.282 -2.456 1 1 A CYS 0.490 1
ATOM 100 C CA . CYS 95 95 ? A 1.361 14.640 -1.153 1 1 A CYS 0.490 1
ATOM 101 C C . CYS 95 95 ? A 2.526 13.742 -0.805 1 1 A CYS 0.490 1
ATOM 102 O O . CYS 95 95 ? A 2.701 12.664 -1.377 1 1 A CYS 0.490 1
ATOM 103 C CB . CYS 95 95 ? A 0.096 13.742 -1.050 1 1 A CYS 0.490 1
ATOM 104 S SG . CYS 95 95 ? A -0.679 13.674 0.594 1 1 A CYS 0.490 1
ATOM 105 N N . ALA 96 96 ? A 3.362 14.142 0.154 1 1 A ALA 0.560 1
ATOM 106 C CA . ALA 96 96 ? A 4.533 13.389 0.458 1 1 A ALA 0.560 1
ATOM 107 C C . ALA 96 96 ? A 4.231 12.484 1.611 1 1 A ALA 0.560 1
ATOM 108 O O . ALA 96 96 ? A 4.489 12.766 2.783 1 1 A ALA 0.560 1
ATOM 109 C CB . ALA 96 96 ? A 5.643 14.374 0.744 1 1 A ALA 0.560 1
ATOM 110 N N . CYS 97 97 ? A 3.633 11.345 1.310 1 1 A CYS 0.600 1
ATOM 111 C CA . CYS 97 97 ? A 3.250 10.395 2.310 1 1 A CYS 0.600 1
ATOM 112 C C . CYS 97 97 ? A 4.049 9.136 2.052 1 1 A CYS 0.600 1
ATOM 113 O O . CYS 97 97 ? A 4.428 8.901 0.903 1 1 A CYS 0.600 1
ATOM 114 C CB . CYS 97 97 ? A 1.726 10.161 2.344 1 1 A CYS 0.600 1
ATOM 115 S SG . CYS 97 97 ? A 0.794 10.778 0.925 1 1 A CYS 0.600 1
ATOM 116 N N . PRO 98 98 ? A 4.397 8.338 3.068 1 1 A PRO 0.630 1
ATOM 117 C CA . PRO 98 98 ? A 5.003 7.017 2.904 1 1 A PRO 0.630 1
ATOM 118 C C . PRO 98 98 ? A 4.332 6.132 1.837 1 1 A PRO 0.630 1
ATOM 119 O O . PRO 98 98 ? A 3.126 6.283 1.666 1 1 A PRO 0.630 1
ATOM 120 C CB . PRO 98 98 ? A 4.918 6.392 4.318 1 1 A PRO 0.630 1
ATOM 121 C CG . PRO 98 98 ? A 4.835 7.576 5.286 1 1 A PRO 0.630 1
ATOM 122 C CD . PRO 98 98 ? A 4.106 8.637 4.475 1 1 A PRO 0.630 1
ATOM 123 N N . PRO 99 99 ? A 4.957 5.212 1.115 1 1 A PRO 0.610 1
ATOM 124 C CA . PRO 99 99 ? A 4.265 4.377 0.127 1 1 A PRO 0.610 1
ATOM 125 C C . PRO 99 99 ? A 3.366 3.342 0.764 1 1 A PRO 0.610 1
ATOM 126 O O . PRO 99 99 ? A 2.505 2.795 0.087 1 1 A PRO 0.610 1
ATOM 127 C CB . PRO 99 99 ? A 5.405 3.680 -0.632 1 1 A PRO 0.610 1
ATOM 128 C CG . PRO 99 99 ? A 6.599 3.674 0.345 1 1 A PRO 0.610 1
ATOM 129 C CD . PRO 99 99 ? A 6.364 4.866 1.284 1 1 A PRO 0.610 1
ATOM 130 N N . SER 100 100 ? A 3.590 3.063 2.064 1 1 A SER 0.640 1
ATOM 131 C CA . SER 100 100 ? A 2.801 2.201 2.908 1 1 A SER 0.640 1
ATOM 132 C C . SER 100 100 ? A 1.542 2.912 3.358 1 1 A SER 0.640 1
ATOM 133 O O . SER 100 100 ? A 0.615 2.276 3.807 1 1 A SER 0.640 1
ATOM 134 C CB . SER 100 100 ? A 3.632 1.612 4.102 1 1 A SER 0.640 1
ATOM 135 O OG . SER 100 100 ? A 4.338 2.565 4.901 1 1 A SER 0.640 1
ATOM 136 N N . PHE 101 101 ? A 1.449 4.250 3.149 1 1 A PHE 0.620 1
ATOM 137 C CA . PHE 101 101 ? A 0.306 5.047 3.529 1 1 A PHE 0.620 1
ATOM 138 C C . PHE 101 101 ? A -0.710 5.121 2.410 1 1 A PHE 0.620 1
ATOM 139 O O . PHE 101 101 ? A -0.441 4.803 1.248 1 1 A PHE 0.620 1
ATOM 140 C CB . PHE 101 101 ? A 0.699 6.507 3.915 1 1 A PHE 0.620 1
ATOM 141 C CG . PHE 101 101 ? A 1.127 6.650 5.347 1 1 A PHE 0.620 1
ATOM 142 C CD1 . PHE 101 101 ? A 1.917 5.694 6.005 1 1 A PHE 0.620 1
ATOM 143 C CD2 . PHE 101 101 ? A 0.762 7.814 6.047 1 1 A PHE 0.620 1
ATOM 144 C CE1 . PHE 101 101 ? A 2.343 5.900 7.316 1 1 A PHE 0.620 1
ATOM 145 C CE2 . PHE 101 101 ? A 1.194 8.027 7.360 1 1 A PHE 0.620 1
ATOM 146 C CZ . PHE 101 101 ? A 1.970 7.057 8.002 1 1 A PHE 0.620 1
ATOM 147 N N . TYR 102 102 ? A -1.947 5.517 2.756 1 1 A TYR 0.550 1
ATOM 148 C CA . TYR 102 102 ? A -3.058 5.546 1.834 1 1 A TYR 0.550 1
ATOM 149 C C . TYR 102 102 ? A -4.247 6.207 2.501 1 1 A TYR 0.550 1
ATOM 150 O O . TYR 102 102 ? A -4.183 6.483 3.688 1 1 A TYR 0.550 1
ATOM 151 C CB . TYR 102 102 ? A -3.476 4.105 1.458 1 1 A TYR 0.550 1
ATOM 152 C CG . TYR 102 102 ? A -4.148 4.105 0.131 1 1 A TYR 0.550 1
ATOM 153 C CD1 . TYR 102 102 ? A -5.531 3.902 0.030 1 1 A TYR 0.550 1
ATOM 154 C CD2 . TYR 102 102 ? A -3.393 4.338 -1.025 1 1 A TYR 0.550 1
ATOM 155 C CE1 . TYR 102 102 ? A -6.150 3.898 -1.224 1 1 A TYR 0.550 1
ATOM 156 C CE2 . TYR 102 102 ? A -4.007 4.312 -2.283 1 1 A TYR 0.550 1
ATOM 157 C CZ . TYR 102 102 ? A -5.387 4.087 -2.380 1 1 A TYR 0.550 1
ATOM 158 O OH . TYR 102 102 ? A -6.023 4.021 -3.631 1 1 A TYR 0.550 1
ATOM 159 N N . GLY 103 103 ? A -5.372 6.462 1.796 1 1 A GLY 0.570 1
ATOM 160 C CA . GLY 103 103 ? A -6.611 6.969 2.390 1 1 A GLY 0.570 1
ATOM 161 C C . GLY 103 103 ? A -6.794 8.430 2.094 1 1 A GLY 0.570 1
ATOM 162 O O . GLY 103 103 ? A -6.345 9.270 2.852 1 1 A GLY 0.570 1
ATOM 163 N N . ARG 104 104 ? A -7.436 8.762 0.946 1 1 A ARG 0.500 1
ATOM 164 C CA . ARG 104 104 ? A -7.624 10.117 0.441 1 1 A ARG 0.500 1
ATOM 165 C C . ARG 104 104 ? A -6.340 10.902 0.290 1 1 A ARG 0.500 1
ATOM 166 O O . ARG 104 104 ? A -5.613 10.772 -0.685 1 1 A ARG 0.500 1
ATOM 167 C CB . ARG 104 104 ? A -8.667 10.901 1.278 1 1 A ARG 0.500 1
ATOM 168 C CG . ARG 104 104 ? A -10.093 10.348 1.156 1 1 A ARG 0.500 1
ATOM 169 C CD . ARG 104 104 ? A -11.023 11.099 2.104 1 1 A ARG 0.500 1
ATOM 170 N NE . ARG 104 104 ? A -12.401 10.549 1.896 1 1 A ARG 0.500 1
ATOM 171 C CZ . ARG 104 104 ? A -13.452 10.933 2.630 1 1 A ARG 0.500 1
ATOM 172 N NH1 . ARG 104 104 ? A -13.319 11.857 3.573 1 1 A ARG 0.500 1
ATOM 173 N NH2 . ARG 104 104 ? A -14.642 10.369 2.440 1 1 A ARG 0.500 1
ATOM 174 N N . ASN 105 105 ? A -6.037 11.699 1.321 1 1 A ASN 0.590 1
ATOM 175 C CA . ASN 105 105 ? A -4.818 12.413 1.479 1 1 A ASN 0.590 1
ATOM 176 C C . ASN 105 105 ? A -3.884 11.575 2.380 1 1 A ASN 0.590 1
ATOM 177 O O . ASN 105 105 ? A -3.340 12.080 3.308 1 1 A ASN 0.590 1
ATOM 178 C CB . ASN 105 105 ? A -5.120 13.772 2.174 1 1 A ASN 0.590 1
ATOM 179 C CG . ASN 105 105 ? A -6.047 14.652 1.338 1 1 A ASN 0.590 1
ATOM 180 O OD1 . ASN 105 105 ? A -5.914 14.864 0.150 1 1 A ASN 0.590 1
ATOM 181 N ND2 . ASN 105 105 ? A -7.051 15.231 2.050 1 1 A ASN 0.590 1
ATOM 182 N N . CYS 106 106 ? A -3.702 10.242 2.162 1 1 A CYS 0.610 1
ATOM 183 C CA . CYS 106 106 ? A -2.761 9.461 2.981 1 1 A CYS 0.610 1
ATOM 184 C C . CYS 106 106 ? A -2.960 9.349 4.508 1 1 A CYS 0.610 1
ATOM 185 O O . CYS 106 106 ? A -2.027 9.610 5.268 1 1 A CYS 0.610 1
ATOM 186 C CB . CYS 106 106 ? A -1.300 9.843 2.700 1 1 A CYS 0.610 1
ATOM 187 S SG . CYS 106 106 ? A -0.807 9.591 0.982 1 1 A CYS 0.610 1
ATOM 188 N N . GLU 107 107 ? A -4.150 8.944 4.994 1 1 A GLU 0.580 1
ATOM 189 C CA . GLU 107 107 ? A -4.594 8.854 6.384 1 1 A GLU 0.580 1
ATOM 190 C C . GLU 107 107 ? A -4.578 7.492 7.040 1 1 A GLU 0.580 1
ATOM 191 O O . GLU 107 107 ? A -5.226 7.225 8.055 1 1 A GLU 0.580 1
ATOM 192 C CB . GLU 107 107 ? A -6.043 9.404 6.471 1 1 A GLU 0.580 1
ATOM 193 C CG . GLU 107 107 ? A -7.259 8.587 5.941 1 1 A GLU 0.580 1
ATOM 194 C CD . GLU 107 107 ? A -8.565 9.387 6.048 1 1 A GLU 0.580 1
ATOM 195 O OE1 . GLU 107 107 ? A -9.009 9.663 7.189 1 1 A GLU 0.580 1
ATOM 196 O OE2 . GLU 107 107 ? A -9.134 9.736 4.973 1 1 A GLU 0.580 1
ATOM 197 N N . HIS 108 108 ? A -3.818 6.562 6.496 1 1 A HIS 0.580 1
ATOM 198 C CA . HIS 108 108 ? A -3.818 5.207 6.934 1 1 A HIS 0.580 1
ATOM 199 C C . HIS 108 108 ? A -2.400 4.769 6.696 1 1 A HIS 0.580 1
ATOM 200 O O . HIS 108 108 ? A -1.759 5.382 5.834 1 1 A HIS 0.580 1
ATOM 201 C CB . HIS 108 108 ? A -4.871 4.455 6.088 1 1 A HIS 0.580 1
ATOM 202 C CG . HIS 108 108 ? A -5.533 3.369 6.834 1 1 A HIS 0.580 1
ATOM 203 N ND1 . HIS 108 108 ? A -4.867 2.179 6.878 1 1 A HIS 0.580 1
ATOM 204 C CD2 . HIS 108 108 ? A -6.651 3.307 7.587 1 1 A HIS 0.580 1
ATOM 205 C CE1 . HIS 108 108 ? A -5.565 1.404 7.648 1 1 A HIS 0.580 1
ATOM 206 N NE2 . HIS 108 108 ? A -6.681 2.027 8.118 1 1 A HIS 0.580 1
ATOM 207 N N . ASP 109 109 ? A -1.895 3.799 7.483 1 1 A ASP 0.620 1
ATOM 208 C CA . ASP 109 109 ? A -0.608 3.124 7.385 1 1 A ASP 0.620 1
ATOM 209 C C . ASP 109 109 ? A -0.870 1.714 6.747 1 1 A ASP 0.620 1
ATOM 210 O O . ASP 109 109 ? A -2.042 1.424 6.377 1 1 A ASP 0.620 1
ATOM 211 C CB . ASP 109 109 ? A 0.001 2.992 8.834 1 1 A ASP 0.620 1
ATOM 212 C CG . ASP 109 109 ? A 1.516 3.163 9.001 1 1 A ASP 0.620 1
ATOM 213 O OD1 . ASP 109 109 ? A 2.354 2.471 8.372 1 1 A ASP 0.620 1
ATOM 214 O OD2 . ASP 109 109 ? A 1.865 4.031 9.852 1 1 A ASP 0.620 1
ATOM 215 O OXT . ASP 109 109 ? A 0.080 0.898 6.637 1 1 A ASP 0.620 1
#
#
loop_
_atom_type.symbol
C
N
O
S
#
#
loop_
_ma_qa_metric.id
_ma_qa_metric.name
_ma_qa_metric.description
_ma_qa_metric.type
_ma_qa_metric.mode
_ma_qa_metric.type_other_details
_ma_qa_metric.software_group_id
1 QMEANDisCo 'Predicted accuracy according to all-atom lDDT in [0,1].'
'pLDDT all-atom in [0,1]' local . 5
2 QMEANDisCo 'Predicted accuracy according to all-atom lDDT in [0,1].'
'pLDDT all-atom in [0,1]' global . 5
3 GMQE
'Global Model Quality Estimate of the model accuracy, calculated by SWISS-MODEL.'
'normalized score' global . 6
#
#
loop_
_ma_qa_metric_global.ordinal_id
_ma_qa_metric_global.model_id
_ma_qa_metric_global.metric_id
_ma_qa_metric_global.metric_value
1 1 2 0.519
2 1 3 0.049
#
#
loop_
_ma_qa_metric_local.ordinal_id
_ma_qa_metric_local.model_id
_ma_qa_metric_local.label_asym_id
_ma_qa_metric_local.label_seq_id
_ma_qa_metric_local.label_comp_id
_ma_qa_metric_local.metric_id
_ma_qa_metric_local.metric_value
1 1 A 81 THR 1 0.410
2 1 A 82 CYS 1 0.540
3 1 A 83 CYS 1 0.550
4 1 A 84 LEU 1 0.540
5 1 A 85 ASN 1 0.560
6 1 A 86 GLY 1 0.570
7 1 A 87 GLY 1 0.570
8 1 A 88 THR 1 0.520
9 1 A 89 CYS 1 0.470
10 1 A 90 MET 1 0.380
11 1 A 91 LEU 1 0.250
12 1 A 92 GLU 1 0.210
13 1 A 93 SER 1 0.400
14 1 A 94 PHE 1 0.320
15 1 A 95 CYS 1 0.490
16 1 A 96 ALA 1 0.560
17 1 A 97 CYS 1 0.600
18 1 A 98 PRO 1 0.630
19 1 A 99 PRO 1 0.610
20 1 A 100 SER 1 0.640
21 1 A 101 PHE 1 0.620
22 1 A 102 TYR 1 0.550
23 1 A 103 GLY 1 0.570
24 1 A 104 ARG 1 0.500
25 1 A 105 ASN 1 0.590
26 1 A 106 CYS 1 0.610
27 1 A 107 GLU 1 0.580
28 1 A 108 HIS 1 0.580
29 1 A 109 ASP 1 0.620
#
#
loop_
_pdbx_data_usage.id
_pdbx_data_usage.type
_pdbx_data_usage.details
_pdbx_data_usage.url
1 license
;This SWISS-MODEL protein model is copyright.
It is produced by the SWISS-MODEL server, developed by the Computational
Structural Biology Group at the SIB Swiss Institute of Bioinformatics at the
Biozentrum, University of Basel (https://swissmodel.expasy.org). This
model is licensed under the CC BY-SA 4.0 Creative Commons
Attribution-ShareAlike 4.0 International License
(https://creativecommons.org/licenses/by-sa/4.0/legalcode), i.e. you
can copy and redistribute the model in any medium or format,
transform and build upon the model for any purpose, even
commercially, under the following terms:
Attribution - You must give appropriate credit, provide a link to
the license, and indicate if changes were made. You may do so in any
reasonable manner, but not in any way that suggests the licensor
endorses you or your use. When you publish, patent or distribute
results that were fully or partially based on the model, please cite
the corresponding papers mentioned under JRNL.
ShareAlike - If you remix, transform, or build upon the material,
you must distribute your contributions under the same license as the
original.
No additional restrictions - you may not apply legal terms or
technological measures that legally restrict others from doing
anything the license permits.
Find a human-readable summary of (and not a substitute for) the
CC BY-SA 4.0 license at this link:
https://creativecommons.org/licenses/by-sa/4.0/
;
https://creativecommons.org/licenses/by-sa/4.0/legalcode
2 disclaimer
;The SWISS-MODEL SERVER produces theoretical models for
proteins. The results of any theoretical modelling procedure is
NON-EXPERIMENTAL and MUST be considered with care. These models may
contain significant errors. This is especially true for automated
modeling since there is no human intervention during model
building. Please read the header section and the logfile carefully
to know what templates and alignments were used during the model
building process. All information by the SWISS-MODEL SERVER is
provided "AS-IS", without any warranty, expressed or implied.
;
https://swissmodel.expasy.org/docs/terms_of_use#disclaimer
#