data_SMR-b14ad601926de3fcf57a1e185bca577a_2 _entry.id SMR-b14ad601926de3fcf57a1e185bca577a_2 _struct.entry_id SMR-b14ad601926de3fcf57a1e185bca577a_2 _struct.pdbx_model_details ;This model was generated unsupervised by the SWISS-MODEL homology-modelling pipeline for the SWISS-MODEL Repository, a database of annotated 3D protein structure models. The modelled monomer covers following UniProtKB entries: - Q6ZNE9 (isoform 3)/ RUFY4_HUMAN, RUN and FYVE domain-containing protein 4 Estimated model accuracy of this model is 0.07, calculated by SWISS-MODEL as Global Model Quality Estimate (GMQE). ; _struct.pdbx_structure_determination_methodology computational _struct.title 'Model for UniProtKB entries Q6ZNE9 (isoform 3)' _audit_conform.dict_location https://raw.githubusercontent.com/ihmwg/ModelCIF/d18ba38/base/mmcif_ma-core.dic _audit_conform.dict_name mmcif_ma.dic _audit_conform.dict_version 1.4.6 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary 'The SWISS-MODEL Repository - new features and functionality' 'Nucleic Acids Res.' 45 D313 D319 2017 27899672 10.1093/nar/gkw1132 2 'SWISS-MODEL: homology modelling of protein structures and complexes' 'Nucleic Acids Res.' 46 W296 W303 2018 29788355 10.1093/nar/gky427 3 'ProMod3 - A versatile homology modelling toolbox' 'PLoS Comput. Biol.' 17(1) 1 18 2021 33507980 10.1371/journal.pcbi.1008667 4 'QMEANDisCo - distance constraints applied on model quality estimation' Bioinformatics 36 1765 1771 2020 31697312 10.1093/bioinformatics/btz828 5 'OpenStructure: an integrated software framework for computational structural biology' 'Acta Crystallogr., Sect. D: Biol. Crystallogr.' 69 701 709 2013 23633579 10.1107/S0907444913007051 6 'BLAST+: architecture and applications' 'BMC Bioinf.' 10 421 . 2009 20003500 10.1186/1471-2105-10-421 7 'HH-suite3 for fast remote homology detection and deep protein annotation' 'BMC Bioinf.' 20 473 . 2019 31521110 10.1186/s12859-019-3019-7 # # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Bienert, S.' 1 primary 'Waterhouse, A.' 2 primary 'de Beer, T.A.P.' 3 primary 'Tauriello, G.' 4 primary 'Studer, G.' 5 primary 'Bordoli, L.' 6 primary 'Schwede, T.' 7 2 'Waterhouse, A.' 8 2 'Bertoni, M.' 9 2 'Bienert, S.' 10 2 'Studer, G.' 11 2 'Tauriello, G.' 12 2 'Gumienny, R.' 13 2 'Heer, F.T.' 14 2 'de Beer, T.A.P.' 15 2 'Rempfer, C.' 16 2 'Bordoli, L.' 17 2 'Lepore, R.' 18 2 'Schwede, T.' 19 3 'Studer, G.' 20 3 'Tauriello, G.' 21 3 'Bienert, S.' 22 3 'Biasini, M.' 23 3 'Johner, N.' 24 3 'Schwede, T.' 25 4 'Studer, G.' 26 4 'Rempfer, C.' 27 4 'Waterhouse, A.M.' 28 4 'Gumienny, R.' 29 4 'Haas, J.' 30 4 'Schwede, T.' 31 5 'Biasini, M.' 32 5 'Schmidt, T.' 33 5 'Bienert, S.' 34 5 'Mariani, V.' 35 5 'Studer, G.' 36 5 'Haas, J.' 37 5 'Johner, N.' 38 5 'Schenk, A.D.' 39 5 'Philippsen, A.' 40 5 'Schwede, T.' 41 6 'Camacho, C.' 42 6 'Coulouris, G.' 43 6 'Avagyan, V.' 44 6 'Ma, N.' 45 6 'Papadopoulos, J.' 46 6 'Bealer, K.' 47 6 'Madden, T.L.' 48 7 'Steinegger, M.' 49 7 'Meier, M.' 50 7 'Mirdita, M.' 51 7 'Vohringer, H.' 52 7 'Haunsberger, S.J.' 53 7 'Soding, J.' 54 # # loop_ _software.pdbx_ordinal _software.name _software.classification _software.description _software.version _software.type _software.location _software.citation_id 1 SWISS-MODEL 'model building' 'Homology modelling web service' 3ef406dae3f6eb8b74980f2a6e69a2109acde4aa package https://swissmodel.expasy.org 2 2 ProMod3 'model building' 'Modular homology modelling engine' 3.4.1 library https://git.scicore.unibas.ch/schwede/ProMod3 3 3 QMEAN 'model building' 'QMEAN - Qualitative Model Energy ANalysis' 4.3.1 library https://git.scicore.unibas.ch/schwede/QMEAN 4 4 OpenStructure 'data processing' 'Open-Source Computational Structural Biology Framework' 2.8.0 package https://openstructure.org/ 5 5 BLAST 'data collection' . 2.2.31 package https://blast.ncbi.nlm.nih.gov 6 6 HH-suite 'data collection' 'HH-suite3 for sensitive sequence searching' 3.2.0 package https://github.com/soedinglab/hh-suite 7 # # loop_ _ma_software_group.ordinal_id _ma_software_group.group_id _ma_software_group.software_id _ma_software_group.parameter_group_id 1 1 6 . 2 2 1 . 3 2 4 . 4 2 5 . 5 2 6 . 6 3 1 . 7 3 4 . 8 4 1 . 9 4 2 . 10 4 4 . 11 5 3 . 12 6 1 . 13 6 3 . 14 6 4 . # # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Bienert, S.' 1 'Waterhouse, A.' 2 'de Beer, T.A.P.' 3 'Tauriello, G.' 4 'Studer, G.' 5 'Bordoli, L.' 6 'Schwede, T.' 7 # # loop_ _chem_comp.id _chem_comp.type _chem_comp.name _chem_comp.formula _chem_comp.formula_weight _chem_comp.ma_provenance ALA 'L-peptide linking' ALANINE 'C3 H7 N O2' 89.094 'CCD Core' ARG 'L-peptide linking' ARGININE 'C6 H15 N4 O2 1' 175.212 'CCD Core' ASN 'L-peptide linking' ASPARAGINE 'C4 H8 N2 O3' 132.119 'CCD Core' ASP 'L-peptide linking' 'ASPARTIC ACID' 'C4 H7 N O4' 133.103 'CCD Core' CYS 'L-peptide linking' CYSTEINE 'C3 H7 N O2 S' 121.154 'CCD Core' GLN 'L-peptide linking' GLUTAMINE 'C5 H10 N2 O3' 146.146 'CCD Core' GLU 'L-peptide linking' 'GLUTAMIC ACID' 'C5 H9 N O4' 147.130 'CCD Core' GLY 'peptide linking' GLYCINE 'C2 H5 N O2' 75.067 'CCD Core' HIS 'L-peptide linking' HISTIDINE 'C6 H10 N3 O2 1' 156.165 'CCD Core' ILE 'L-peptide linking' ISOLEUCINE 'C6 H13 N O2' 131.175 'CCD Core' LEU 'L-peptide linking' LEUCINE 'C6 H13 N O2' 131.175 'CCD Core' LYS 'L-peptide linking' LYSINE 'C6 H15 N2 O2 1' 147.198 'CCD Core' MET 'L-peptide linking' METHIONINE 'C5 H11 N O2 S' 149.208 'CCD Core' PHE 'L-peptide linking' PHENYLALANINE 'C9 H11 N O2' 165.192 'CCD Core' PRO 'L-peptide linking' PROLINE 'C5 H9 N O2' 115.132 'CCD Core' SER 'L-peptide linking' SERINE 'C3 H7 N O3' 105.093 'CCD Core' THR 'L-peptide linking' THREONINE 'C4 H9 N O3' 119.120 'CCD Core' TRP 'L-peptide linking' TRYPTOPHAN 'C11 H12 N2 O2' 204.229 'CCD Core' TYR 'L-peptide linking' TYROSINE 'C9 H11 N O3' 181.191 'CCD Core' VAL 'L-peptide linking' VALINE 'C5 H11 N O2' 117.148 'CCD Core' # # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.details 1 polymer man . 22486.210 1 . # # loop_ _struct_ref.id _struct_ref.entity_id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_align_begin _struct_ref.pdbx_seq_one_letter_code _struct_ref.details 1 1 UNP RUFY4_HUMAN Q6ZNE9 1 ;MAEEGAILKVTKDLRAAVSAILQGYGDGQGPVTDTSAELHRLCGCLELLLQFDQKEQKSFLGPRKDYWDF LCTALRRQRGNMEPIHFVRSQDKGMVWTPEPSALPRTPRRHPGLSLCSQWGGLRVGPPAARPGWSLAHVL RVTLLQFHPNPGKETQKKQRCPKEDPSRIWRA ; 'RUN and FYVE domain-containing protein 4' # # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.seq_align_beg _struct_ref_seq.seq_align_end _struct_ref_seq.db_align_beg _struct_ref_seq.db_align_end 1 1 1 172 1 172 # # loop_ _ma_target_ref_db_details.target_entity_id _ma_target_ref_db_details.db_name _ma_target_ref_db_details.db_name_other_details _ma_target_ref_db_details.db_code _ma_target_ref_db_details.db_accession _ma_target_ref_db_details.seq_db_isoform _ma_target_ref_db_details.seq_db_align_begin _ma_target_ref_db_details.seq_db_align_end _ma_target_ref_db_details.ncbi_taxonomy_id _ma_target_ref_db_details.organism_scientific _ma_target_ref_db_details.seq_db_sequence_version_date _ma_target_ref_db_details.seq_db_sequence_checksum 1 UNP . RUFY4_HUMAN Q6ZNE9 Q6ZNE9-3 1 172 9606 'Homo sapiens (Human)' 2008-11-25 995B33DF3170E970 # # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_strand_id _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can 1 polypeptide(L) no no B ;MAEEGAILKVTKDLRAAVSAILQGYGDGQGPVTDTSAELHRLCGCLELLLQFDQKEQKSFLGPRKDYWDF LCTALRRQRGNMEPIHFVRSQDKGMVWTPEPSALPRTPRRHPGLSLCSQWGGLRVGPPAARPGWSLAHVL RVTLLQFHPNPGKETQKKQRCPKEDPSRIWRA ; ;MAEEGAILKVTKDLRAAVSAILQGYGDGQGPVTDTSAELHRLCGCLELLLQFDQKEQKSFLGPRKDYWDF LCTALRRQRGNMEPIHFVRSQDKGMVWTPEPSALPRTPRRHPGLSLCSQWGGLRVGPPAARPGWSLAHVL RVTLLQFHPNPGKETQKKQRCPKEDPSRIWRA ; # # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET . 1 2 ALA . 1 3 GLU . 1 4 GLU . 1 5 GLY . 1 6 ALA . 1 7 ILE . 1 8 LEU . 1 9 LYS . 1 10 VAL . 1 11 THR . 1 12 LYS . 1 13 ASP . 1 14 LEU . 1 15 ARG . 1 16 ALA . 1 17 ALA . 1 18 VAL . 1 19 SER . 1 20 ALA . 1 21 ILE . 1 22 LEU . 1 23 GLN . 1 24 GLY . 1 25 TYR . 1 26 GLY . 1 27 ASP . 1 28 GLY . 1 29 GLN . 1 30 GLY . 1 31 PRO . 1 32 VAL . 1 33 THR . 1 34 ASP . 1 35 THR . 1 36 SER . 1 37 ALA . 1 38 GLU . 1 39 LEU . 1 40 HIS . 1 41 ARG . 1 42 LEU . 1 43 CYS . 1 44 GLY . 1 45 CYS . 1 46 LEU . 1 47 GLU . 1 48 LEU . 1 49 LEU . 1 50 LEU . 1 51 GLN . 1 52 PHE . 1 53 ASP . 1 54 GLN . 1 55 LYS . 1 56 GLU . 1 57 GLN . 1 58 LYS . 1 59 SER . 1 60 PHE . 1 61 LEU . 1 62 GLY . 1 63 PRO . 1 64 ARG . 1 65 LYS . 1 66 ASP . 1 67 TYR . 1 68 TRP . 1 69 ASP . 1 70 PHE . 1 71 LEU . 1 72 CYS . 1 73 THR . 1 74 ALA . 1 75 LEU . 1 76 ARG . 1 77 ARG . 1 78 GLN . 1 79 ARG . 1 80 GLY . 1 81 ASN . 1 82 MET . 1 83 GLU . 1 84 PRO . 1 85 ILE . 1 86 HIS . 1 87 PHE . 1 88 VAL . 1 89 ARG . 1 90 SER . 1 91 GLN . 1 92 ASP . 1 93 LYS . 1 94 GLY . 1 95 MET . 1 96 VAL . 1 97 TRP . 1 98 THR . 1 99 PRO . 1 100 GLU . 1 101 PRO . 1 102 SER . 1 103 ALA . 1 104 LEU . 1 105 PRO . 1 106 ARG . 1 107 THR . 1 108 PRO . 1 109 ARG . 1 110 ARG . 1 111 HIS . 1 112 PRO . 1 113 GLY . 1 114 LEU . 1 115 SER . 1 116 LEU . 1 117 CYS . 1 118 SER . 1 119 GLN . 1 120 TRP . 1 121 GLY . 1 122 GLY . 1 123 LEU . 1 124 ARG . 1 125 VAL . 1 126 GLY . 1 127 PRO . 1 128 PRO . 1 129 ALA . 1 130 ALA . 1 131 ARG . 1 132 PRO . 1 133 GLY . 1 134 TRP . 1 135 SER . 1 136 LEU . 1 137 ALA . 1 138 HIS . 1 139 VAL . 1 140 LEU . 1 141 ARG . 1 142 VAL . 1 143 THR . 1 144 LEU . 1 145 LEU . 1 146 GLN . 1 147 PHE . 1 148 HIS . 1 149 PRO . 1 150 ASN . 1 151 PRO . 1 152 GLY . 1 153 LYS . 1 154 GLU . 1 155 THR . 1 156 GLN . 1 157 LYS . 1 158 LYS . 1 159 GLN . 1 160 ARG . 1 161 CYS . 1 162 PRO . 1 163 LYS . 1 164 GLU . 1 165 ASP . 1 166 PRO . 1 167 SER . 1 168 ARG . 1 169 ILE . 1 170 TRP . 1 171 ARG . 1 172 ALA . # # loop_ _struct_asym.id _struct_asym.entity_id _struct_asym.details A 1 . # # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code A 1 1 MET 1 ? ? ? B . A 1 2 ALA 2 ? ? ? B . A 1 3 GLU 3 ? ? ? B . A 1 4 GLU 4 ? ? ? B . A 1 5 GLY 5 ? ? ? B . A 1 6 ALA 6 ? ? ? B . A 1 7 ILE 7 ? ? ? B . A 1 8 LEU 8 8 LEU LEU B . A 1 9 LYS 9 9 LYS LYS B . A 1 10 VAL 10 10 VAL VAL B . A 1 11 THR 11 11 THR THR B . A 1 12 LYS 12 12 LYS LYS B . A 1 13 ASP 13 13 ASP ASP B . A 1 14 LEU 14 14 LEU LEU B . A 1 15 ARG 15 15 ARG ARG B . A 1 16 ALA 16 16 ALA ALA B . A 1 17 ALA 17 17 ALA ALA B . A 1 18 VAL 18 18 VAL VAL B . A 1 19 SER 19 19 SER SER B . A 1 20 ALA 20 20 ALA ALA B . A 1 21 ILE 21 21 ILE ILE B . A 1 22 LEU 22 22 LEU LEU B . A 1 23 GLN 23 23 GLN GLN B . A 1 24 GLY 24 24 GLY GLY B . A 1 25 TYR 25 25 TYR TYR B . A 1 26 GLY 26 26 GLY GLY B . A 1 27 ASP 27 27 ASP ASP B . A 1 28 GLY 28 28 GLY GLY B . A 1 29 GLN 29 29 GLN GLN B . A 1 30 GLY 30 30 GLY GLY B . A 1 31 PRO 31 31 PRO PRO B . A 1 32 VAL 32 32 VAL VAL B . A 1 33 THR 33 33 THR THR B . A 1 34 ASP 34 34 ASP ASP B . A 1 35 THR 35 35 THR THR B . A 1 36 SER 36 36 SER SER B . A 1 37 ALA 37 37 ALA ALA B . A 1 38 GLU 38 38 GLU GLU B . A 1 39 LEU 39 39 LEU LEU B . A 1 40 HIS 40 40 HIS HIS B . A 1 41 ARG 41 41 ARG ARG B . A 1 42 LEU 42 42 LEU LEU B . A 1 43 CYS 43 43 CYS CYS B . A 1 44 GLY 44 44 GLY GLY B . A 1 45 CYS 45 45 CYS CYS B . A 1 46 LEU 46 46 LEU LEU B . A 1 47 GLU 47 47 GLU GLU B . A 1 48 LEU 48 48 LEU LEU B . A 1 49 LEU 49 ? ? ? B . A 1 50 LEU 50 ? ? ? B . A 1 51 GLN 51 ? ? ? B . A 1 52 PHE 52 ? ? ? B . A 1 53 ASP 53 ? ? ? B . A 1 54 GLN 54 ? ? ? B . A 1 55 LYS 55 ? ? ? B . A 1 56 GLU 56 ? ? ? B . A 1 57 GLN 57 ? ? ? B . A 1 58 LYS 58 ? ? ? B . A 1 59 SER 59 ? ? ? B . A 1 60 PHE 60 ? ? ? B . A 1 61 LEU 61 ? ? ? B . A 1 62 GLY 62 ? ? ? B . A 1 63 PRO 63 ? ? ? B . A 1 64 ARG 64 ? ? ? B . A 1 65 LYS 65 ? ? ? B . A 1 66 ASP 66 ? ? ? B . A 1 67 TYR 67 ? ? ? B . A 1 68 TRP 68 ? ? ? B . A 1 69 ASP 69 ? ? ? B . A 1 70 PHE 70 ? ? ? B . A 1 71 LEU 71 ? ? ? B . A 1 72 CYS 72 ? ? ? B . A 1 73 THR 73 ? ? ? B . A 1 74 ALA 74 ? ? ? B . A 1 75 LEU 75 ? ? ? B . A 1 76 ARG 76 ? ? ? B . A 1 77 ARG 77 ? ? ? B . A 1 78 GLN 78 ? ? ? B . A 1 79 ARG 79 ? ? ? B . A 1 80 GLY 80 ? ? ? B . A 1 81 ASN 81 ? ? ? B . A 1 82 MET 82 ? ? ? B . A 1 83 GLU 83 ? ? ? B . A 1 84 PRO 84 ? ? ? B . A 1 85 ILE 85 ? ? ? B . A 1 86 HIS 86 ? ? ? B . A 1 87 PHE 87 ? ? ? B . A 1 88 VAL 88 ? ? ? B . A 1 89 ARG 89 ? ? ? B . A 1 90 SER 90 ? ? ? B . A 1 91 GLN 91 ? ? ? B . A 1 92 ASP 92 ? ? ? B . A 1 93 LYS 93 ? ? ? B . A 1 94 GLY 94 ? ? ? B . A 1 95 MET 95 ? ? ? B . A 1 96 VAL 96 ? ? ? B . A 1 97 TRP 97 ? ? ? B . A 1 98 THR 98 ? ? ? B . A 1 99 PRO 99 ? ? ? B . A 1 100 GLU 100 ? ? ? B . A 1 101 PRO 101 ? ? ? B . A 1 102 SER 102 ? ? ? B . A 1 103 ALA 103 ? ? ? B . A 1 104 LEU 104 ? ? ? B . A 1 105 PRO 105 ? ? ? B . A 1 106 ARG 106 ? ? ? B . A 1 107 THR 107 ? ? ? B . A 1 108 PRO 108 ? ? ? B . A 1 109 ARG 109 ? ? ? B . A 1 110 ARG 110 ? ? ? B . A 1 111 HIS 111 ? ? ? B . A 1 112 PRO 112 ? ? ? B . A 1 113 GLY 113 ? ? ? B . A 1 114 LEU 114 ? ? ? B . A 1 115 SER 115 ? ? ? B . A 1 116 LEU 116 ? ? ? B . A 1 117 CYS 117 ? ? ? B . A 1 118 SER 118 ? ? ? B . A 1 119 GLN 119 ? ? ? B . A 1 120 TRP 120 ? ? ? B . A 1 121 GLY 121 ? ? ? B . A 1 122 GLY 122 ? ? ? B . A 1 123 LEU 123 ? ? ? B . A 1 124 ARG 124 ? ? ? B . A 1 125 VAL 125 ? ? ? B . A 1 126 GLY 126 ? ? ? B . A 1 127 PRO 127 ? ? ? B . A 1 128 PRO 128 ? ? ? B . A 1 129 ALA 129 ? ? ? B . A 1 130 ALA 130 ? ? ? B . A 1 131 ARG 131 ? ? ? B . A 1 132 PRO 132 ? ? ? B . A 1 133 GLY 133 ? ? ? B . A 1 134 TRP 134 ? ? ? B . A 1 135 SER 135 ? ? ? B . A 1 136 LEU 136 ? ? ? B . A 1 137 ALA 137 ? ? ? B . A 1 138 HIS 138 ? ? ? B . A 1 139 VAL 139 ? ? ? B . A 1 140 LEU 140 ? ? ? B . A 1 141 ARG 141 ? ? ? B . A 1 142 VAL 142 ? ? ? B . A 1 143 THR 143 ? ? ? B . A 1 144 LEU 144 ? ? ? B . A 1 145 LEU 145 ? ? ? B . A 1 146 GLN 146 ? ? ? B . A 1 147 PHE 147 ? ? ? B . A 1 148 HIS 148 ? ? ? B . A 1 149 PRO 149 ? ? ? B . A 1 150 ASN 150 ? ? ? B . A 1 151 PRO 151 ? ? ? B . A 1 152 GLY 152 ? ? ? B . A 1 153 LYS 153 ? ? ? B . A 1 154 GLU 154 ? ? ? B . A 1 155 THR 155 ? ? ? B . A 1 156 GLN 156 ? ? ? B . A 1 157 LYS 157 ? ? ? B . A 1 158 LYS 158 ? ? ? B . A 1 159 GLN 159 ? ? ? B . A 1 160 ARG 160 ? ? ? B . A 1 161 CYS 161 ? ? ? B . A 1 162 PRO 162 ? ? ? B . A 1 163 LYS 163 ? ? ? B . A 1 164 GLU 164 ? ? ? B . A 1 165 ASP 165 ? ? ? B . A 1 166 PRO 166 ? ? ? B . A 1 167 SER 167 ? ? ? B . A 1 168 ARG 168 ? ? ? B . A 1 169 ILE 169 ? ? ? B . A 1 170 TRP 170 ? ? ? B . A 1 171 ARG 171 ? ? ? B . A 1 172 ALA 172 ? ? ? B . # # loop_ _ma_data.id _ma_data.name _ma_data.content_type _ma_data.content_type_other_details 1 'Golgi membrane protein 1 {PDB ID=8ybc, label_asym_id=B, auth_asym_id=B, SMTL ID=8ybc.1.B}' 'template structure' . 2 . target . 3 'Target-template alignment by HHblits to 8ybc, label_asym_id=B' 'target-template alignment' . 4 'model 2' 'model coordinates' . 5 SMTL 'reference database' . 6 PDB 'reference database' . 7 'Template search output' other 'Results of the sequence search' # # loop_ _ma_data_group.ordinal_id _ma_data_group.group_id _ma_data_group.data_id 1 1 2 2 1 5 3 1 6 4 2 7 5 3 2 6 3 1 7 3 3 8 4 1 9 4 3 10 5 4 # # loop_ _ma_data_ref_db.data_id _ma_data_ref_db.name _ma_data_ref_db.location_url _ma_data_ref_db.version _ma_data_ref_db.release_date 5 SMTL https://swissmodel.expasy.org/templates/ . 2025-02-19 6 PDB https://www.wwpdb.org . 2025-02-14 # # loop_ _ma_target_entity.entity_id _ma_target_entity.data_id _ma_target_entity.origin 1 2 'reference database' # # loop_ _ma_target_entity_instance.asym_id _ma_target_entity_instance.entity_id _ma_target_entity_instance.details A 1 . # # loop_ _ma_template_trans_matrix.id _ma_template_trans_matrix.rot_matrix[1][1] _ma_template_trans_matrix.rot_matrix[2][1] _ma_template_trans_matrix.rot_matrix[3][1] _ma_template_trans_matrix.rot_matrix[1][2] _ma_template_trans_matrix.rot_matrix[2][2] _ma_template_trans_matrix.rot_matrix[3][2] _ma_template_trans_matrix.rot_matrix[1][3] _ma_template_trans_matrix.rot_matrix[2][3] _ma_template_trans_matrix.rot_matrix[3][3] _ma_template_trans_matrix.tr_vector[1] _ma_template_trans_matrix.tr_vector[2] _ma_template_trans_matrix.tr_vector[3] 1 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0 0 0 # # loop_ _ma_template_details.ordinal_id _ma_template_details.template_id _ma_template_details.template_origin _ma_template_details.template_entity_type _ma_template_details.template_trans_matrix_id _ma_template_details.template_data_id _ma_template_details.target_asym_id _ma_template_details.template_label_asym_id _ma_template_details.template_label_entity_id _ma_template_details.template_model_num _ma_template_details.template_auth_asym_id 1 1 'reference database' polymer 1 1 A B 1 1 B # # loop_ _ma_template_poly.template_id _ma_template_poly.seq_one_letter_code _ma_template_poly.seq_one_letter_code_can 1 TTGERLIRVLQDQLKTLQRNYGRLQQDVLQFQKNQTNLERKFSYDLSQCINQMKEVKEQCEERIEEV TTGERLIRVLQDQLKTLQRNYGRLQQDVLQFQKNQTNLERKFSYDLSQCINQMKEVKEQCEERIEEV # # loop_ _ma_template_poly_segment.id _ma_template_poly_segment.template_id _ma_template_poly_segment.residue_number_begin _ma_template_poly_segment.residue_number_end 1 1 4 44 # # loop_ _ma_template_ref_db_details.template_id _ma_template_ref_db_details.db_name _ma_template_ref_db_details.db_name_other_details _ma_template_ref_db_details.db_accession_code _ma_template_ref_db_details.db_version_date 1 PDB . 8ybc 2025-02-12 # # loop_ _ma_target_template_poly_mapping.id _ma_target_template_poly_mapping.template_segment_id _ma_target_template_poly_mapping.target_asym_id _ma_target_template_poly_mapping.target_seq_id_begin _ma_target_template_poly_mapping.target_seq_id_end 1 1 A 1 172 # # loop_ _ma_alignment_info.alignment_id _ma_alignment_info.data_id _ma_alignment_info.software_group_id _ma_alignment_info.alignment_length _ma_alignment_info.alignment_type _ma_alignment_info.alignment_mode 1 3 1 172 'target-template pairwise alignment' local # # loop_ _ma_alignment_details.ordinal_id _ma_alignment_details.alignment_id _ma_alignment_details.template_segment_id _ma_alignment_details.target_asym_id _ma_alignment_details.score_type _ma_alignment_details.score_type_other_details _ma_alignment_details.score_value _ma_alignment_details.percent_sequence_identity _ma_alignment_details.sequence_identity_denominator _ma_alignment_details.sequence_identity_denominator_other_details 1 1 1 A 'HHblits e-value' . 7.000 14.634 'Number of aligned residue pairs (not including the gaps)' . # # loop_ _ma_alignment.ordinal_id _ma_alignment.alignment_id _ma_alignment.target_template_flag _ma_alignment.sequence 1 1 1 MAEEGAILKVTKDLRAAVSAILQGYGDGQGPVTDTSAELHRLCGCLELLLQFDQKEQKSFLGPRKDYWDFLCTALRRQRGNMEPIHFVRSQDKGMVWTPEPSALPRTPRRHPGLSLCSQWGGLRVGPPAARPGWSLAHVLRVTLLQFHPNPGKETQKKQRCPKEDPSRIWRA 2 1 2 -------ERLIRVLQDQLKTLQRNYGRLQQDVLQFQKNQTNLERKFSY---------------------------------------------------------------------------------------------------------------------------- # # loop_ _ma_protocol_step.ordinal_id _ma_protocol_step.protocol_id _ma_protocol_step.step_id _ma_protocol_step.method_type _ma_protocol_step.step_name _ma_protocol_step.details _ma_protocol_step.software_group_id _ma_protocol_step.input_data_group_id _ma_protocol_step.output_data_group_id 1 1 1 'template search' 'template search' 'SWISS-MODEL template search in PDB' 2 1 2 2 1 2 'template selection' 'template selection' 'Automatic template selection by SWISS-MODEL {QSQE=0.000}' 3 2 4 3 1 3 modeling 'homology modeling' 'SWISS-MODEL auto-model mode using ProMod3 on 8ybc.1, oligomeric state (monomer) as predicted' 4 3 5 # # loop_ _ma_model_list.ordinal_id _ma_model_list.model_id _ma_model_list.model_group_id _ma_model_list.model_name _ma_model_list.model_group_name _ma_model_list.data_id _ma_model_list.model_type _ma_model_list.model_type_other_details 1 1 1 'model 2' . 4 'Homology model' . # # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_alt_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.auth_seq_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.label_entity_id _atom_site.auth_asym_id _atom_site.auth_comp_id _atom_site.B_iso_or_equiv _atom_site.pdbx_PDB_model_num ATOM 1 N N . LEU 8 8 ? A 33.731 21.318 59.084 1 1 B LEU 0.570 1 ATOM 2 C CA . LEU 8 8 ? A 33.185 20.538 57.921 1 1 B LEU 0.570 1 ATOM 3 C C . LEU 8 8 ? A 32.154 21.186 57.004 1 1 B LEU 0.570 1 ATOM 4 O O . LEU 8 8 ? A 31.677 20.527 56.097 1 1 B LEU 0.570 1 ATOM 5 C CB . LEU 8 8 ? A 32.684 19.151 58.408 1 1 B LEU 0.570 1 ATOM 6 C CG . LEU 8 8 ? A 33.765 18.215 58.997 1 1 B LEU 0.570 1 ATOM 7 C CD1 . LEU 8 8 ? A 33.115 16.953 59.574 1 1 B LEU 0.570 1 ATOM 8 C CD2 . LEU 8 8 ? A 34.809 17.786 57.959 1 1 B LEU 0.570 1 ATOM 9 N N . LYS 9 9 ? A 31.817 22.493 57.141 1 1 B LYS 0.620 1 ATOM 10 C CA . LYS 9 9 ? A 31.064 23.186 56.106 1 1 B LYS 0.620 1 ATOM 11 C C . LYS 9 9 ? A 31.868 23.383 54.821 1 1 B LYS 0.620 1 ATOM 12 O O . LYS 9 9 ? A 31.419 23.040 53.740 1 1 B LYS 0.620 1 ATOM 13 C CB . LYS 9 9 ? A 30.596 24.551 56.646 1 1 B LYS 0.620 1 ATOM 14 C CG . LYS 9 9 ? A 29.742 25.327 55.637 1 1 B LYS 0.620 1 ATOM 15 C CD . LYS 9 9 ? A 29.211 26.642 56.217 1 1 B LYS 0.620 1 ATOM 16 C CE . LYS 9 9 ? A 28.378 27.421 55.198 1 1 B LYS 0.620 1 ATOM 17 N NZ . LYS 9 9 ? A 27.892 28.678 55.803 1 1 B LYS 0.620 1 ATOM 18 N N . VAL 10 10 ? A 33.132 23.852 54.925 1 1 B VAL 0.470 1 ATOM 19 C CA . VAL 10 10 ? A 34.042 23.944 53.784 1 1 B VAL 0.470 1 ATOM 20 C C . VAL 10 10 ? A 34.321 22.578 53.173 1 1 B VAL 0.470 1 ATOM 21 O O . VAL 10 10 ? A 34.274 22.381 51.964 1 1 B VAL 0.470 1 ATOM 22 C CB . VAL 10 10 ? A 35.344 24.624 54.200 1 1 B VAL 0.470 1 ATOM 23 C CG1 . VAL 10 10 ? A 36.389 24.596 53.063 1 1 B VAL 0.470 1 ATOM 24 C CG2 . VAL 10 10 ? A 35.019 26.083 54.581 1 1 B VAL 0.470 1 ATOM 25 N N . THR 11 11 ? A 34.553 21.568 54.033 1 1 B THR 0.490 1 ATOM 26 C CA . THR 11 11 ? A 34.723 20.171 53.641 1 1 B THR 0.490 1 ATOM 27 C C . THR 11 11 ? A 33.513 19.591 52.933 1 1 B THR 0.490 1 ATOM 28 O O . THR 11 11 ? A 33.651 18.804 52.003 1 1 B THR 0.490 1 ATOM 29 C CB . THR 11 11 ? A 35.033 19.260 54.817 1 1 B THR 0.490 1 ATOM 30 O OG1 . THR 11 11 ? A 36.104 19.791 55.588 1 1 B THR 0.490 1 ATOM 31 C CG2 . THR 11 11 ? A 35.396 17.822 54.393 1 1 B THR 0.490 1 ATOM 32 N N . LYS 12 12 ? A 32.284 19.965 53.353 1 1 B LYS 0.490 1 ATOM 33 C CA . LYS 12 12 ? A 31.046 19.599 52.690 1 1 B LYS 0.490 1 ATOM 34 C C . LYS 12 12 ? A 30.994 20.088 51.251 1 1 B LYS 0.490 1 ATOM 35 O O . LYS 12 12 ? A 30.693 19.314 50.342 1 1 B LYS 0.490 1 ATOM 36 C CB . LYS 12 12 ? A 29.833 20.197 53.452 1 1 B LYS 0.490 1 ATOM 37 C CG . LYS 12 12 ? A 28.464 19.878 52.841 1 1 B LYS 0.490 1 ATOM 38 C CD . LYS 12 12 ? A 27.313 20.522 53.626 1 1 B LYS 0.490 1 ATOM 39 C CE . LYS 12 12 ? A 25.967 20.232 52.966 1 1 B LYS 0.490 1 ATOM 40 N NZ . LYS 12 12 ? A 24.872 20.843 53.747 1 1 B LYS 0.490 1 ATOM 41 N N . ASP 13 13 ? A 31.345 21.369 51.018 1 1 B ASP 0.520 1 ATOM 42 C CA . ASP 13 13 ? A 31.291 21.965 49.702 1 1 B ASP 0.520 1 ATOM 43 C C . ASP 13 13 ? A 32.456 21.540 48.821 1 1 B ASP 0.520 1 ATOM 44 O O . ASP 13 13 ? A 32.315 21.410 47.606 1 1 B ASP 0.520 1 ATOM 45 C CB . ASP 13 13 ? A 31.187 23.502 49.812 1 1 B ASP 0.520 1 ATOM 46 C CG . ASP 13 13 ? A 29.890 23.913 50.505 1 1 B ASP 0.520 1 ATOM 47 O OD1 . ASP 13 13 ? A 28.939 23.088 50.571 1 1 B ASP 0.520 1 ATOM 48 O OD2 . ASP 13 13 ? A 29.839 25.074 50.989 1 1 B ASP 0.520 1 ATOM 49 N N . LEU 14 14 ? A 33.633 21.224 49.412 1 1 B LEU 0.520 1 ATOM 50 C CA . LEU 14 14 ? A 34.704 20.550 48.693 1 1 B LEU 0.520 1 ATOM 51 C C . LEU 14 14 ? A 34.270 19.189 48.182 1 1 B LEU 0.520 1 ATOM 52 O O . LEU 14 14 ? A 34.447 18.875 47.010 1 1 B LEU 0.520 1 ATOM 53 C CB . LEU 14 14 ? A 36.002 20.368 49.526 1 1 B LEU 0.520 1 ATOM 54 C CG . LEU 14 14 ? A 36.846 21.635 49.797 1 1 B LEU 0.520 1 ATOM 55 C CD1 . LEU 14 14 ? A 38.278 21.218 50.175 1 1 B LEU 0.520 1 ATOM 56 C CD2 . LEU 14 14 ? A 36.890 22.618 48.615 1 1 B LEU 0.520 1 ATOM 57 N N . ARG 15 15 ? A 33.612 18.368 49.023 1 1 B ARG 0.490 1 ATOM 58 C CA . ARG 15 15 ? A 33.073 17.094 48.587 1 1 B ARG 0.490 1 ATOM 59 C C . ARG 15 15 ? A 32.026 17.212 47.482 1 1 B ARG 0.490 1 ATOM 60 O O . ARG 15 15 ? A 32.046 16.447 46.519 1 1 B ARG 0.490 1 ATOM 61 C CB . ARG 15 15 ? A 32.430 16.343 49.770 1 1 B ARG 0.490 1 ATOM 62 C CG . ARG 15 15 ? A 33.422 15.818 50.821 1 1 B ARG 0.490 1 ATOM 63 C CD . ARG 15 15 ? A 32.668 15.222 52.006 1 1 B ARG 0.490 1 ATOM 64 N NE . ARG 15 15 ? A 33.683 14.754 53.002 1 1 B ARG 0.490 1 ATOM 65 C CZ . ARG 15 15 ? A 33.365 14.303 54.223 1 1 B ARG 0.490 1 ATOM 66 N NH1 . ARG 15 15 ? A 32.098 14.252 54.624 1 1 B ARG 0.490 1 ATOM 67 N NH2 . ARG 15 15 ? A 34.318 13.878 55.049 1 1 B ARG 0.490 1 ATOM 68 N N . ALA 16 16 ? A 31.100 18.188 47.602 1 1 B ALA 0.560 1 ATOM 69 C CA . ALA 16 16 ? A 30.092 18.487 46.606 1 1 B ALA 0.560 1 ATOM 70 C C . ALA 16 16 ? A 30.637 18.991 45.277 1 1 B ALA 0.560 1 ATOM 71 O O . ALA 16 16 ? A 30.207 18.569 44.206 1 1 B ALA 0.560 1 ATOM 72 C CB . ALA 16 16 ? A 29.139 19.560 47.160 1 1 B ALA 0.560 1 ATOM 73 N N . ALA 17 17 ? A 31.621 19.914 45.307 1 1 B ALA 0.570 1 ATOM 74 C CA . ALA 17 17 ? A 32.274 20.394 44.110 1 1 B ALA 0.570 1 ATOM 75 C C . ALA 17 17 ? A 33.028 19.287 43.382 1 1 B ALA 0.570 1 ATOM 76 O O . ALA 17 17 ? A 32.879 19.126 42.175 1 1 B ALA 0.570 1 ATOM 77 C CB . ALA 17 17 ? A 33.205 21.581 44.437 1 1 B ALA 0.570 1 ATOM 78 N N . VAL 18 18 ? A 33.794 18.440 44.112 1 1 B VAL 0.550 1 ATOM 79 C CA . VAL 18 18 ? A 34.509 17.309 43.528 1 1 B VAL 0.550 1 ATOM 80 C C . VAL 18 18 ? A 33.568 16.333 42.842 1 1 B VAL 0.550 1 ATOM 81 O O . VAL 18 18 ? A 33.810 15.922 41.711 1 1 B VAL 0.550 1 ATOM 82 C CB . VAL 18 18 ? A 35.349 16.551 44.559 1 1 B VAL 0.550 1 ATOM 83 C CG1 . VAL 18 18 ? A 35.993 15.275 43.966 1 1 B VAL 0.550 1 ATOM 84 C CG2 . VAL 18 18 ? A 36.484 17.458 45.072 1 1 B VAL 0.550 1 ATOM 85 N N . SER 19 19 ? A 32.436 15.966 43.478 1 1 B SER 0.560 1 ATOM 86 C CA . SER 19 19 ? A 31.488 15.016 42.907 1 1 B SER 0.560 1 ATOM 87 C C . SER 19 19 ? A 30.831 15.492 41.616 1 1 B SER 0.560 1 ATOM 88 O O . SER 19 19 ? A 30.715 14.737 40.649 1 1 B SER 0.560 1 ATOM 89 C CB . SER 19 19 ? A 30.431 14.546 43.943 1 1 B SER 0.560 1 ATOM 90 O OG . SER 19 19 ? A 29.534 15.588 44.322 1 1 B SER 0.560 1 ATOM 91 N N . ALA 20 20 ? A 30.452 16.787 41.557 1 1 B ALA 0.560 1 ATOM 92 C CA . ALA 20 20 ? A 29.960 17.460 40.370 1 1 B ALA 0.560 1 ATOM 93 C C . ALA 20 20 ? A 30.996 17.510 39.248 1 1 B ALA 0.560 1 ATOM 94 O O . ALA 20 20 ? A 30.690 17.262 38.082 1 1 B ALA 0.560 1 ATOM 95 C CB . ALA 20 20 ? A 29.502 18.884 40.749 1 1 B ALA 0.560 1 ATOM 96 N N . ILE 21 21 ? A 32.279 17.779 39.590 1 1 B ILE 0.630 1 ATOM 97 C CA . ILE 21 21 ? A 33.406 17.716 38.663 1 1 B ILE 0.630 1 ATOM 98 C C . ILE 21 21 ? A 33.558 16.318 38.079 1 1 B ILE 0.630 1 ATOM 99 O O . ILE 21 21 ? A 33.666 16.160 36.867 1 1 B ILE 0.630 1 ATOM 100 C CB . ILE 21 21 ? A 34.714 18.180 39.319 1 1 B ILE 0.630 1 ATOM 101 C CG1 . ILE 21 21 ? A 34.653 19.690 39.640 1 1 B ILE 0.630 1 ATOM 102 C CG2 . ILE 21 21 ? A 35.947 17.894 38.431 1 1 B ILE 0.630 1 ATOM 103 C CD1 . ILE 21 21 ? A 35.738 20.142 40.626 1 1 B ILE 0.630 1 ATOM 104 N N . LEU 22 22 ? A 33.492 15.254 38.911 1 1 B LEU 0.750 1 ATOM 105 C CA . LEU 22 22 ? A 33.624 13.872 38.468 1 1 B LEU 0.750 1 ATOM 106 C C . LEU 22 22 ? A 32.602 13.457 37.423 1 1 B LEU 0.750 1 ATOM 107 O O . LEU 22 22 ? A 32.938 12.830 36.420 1 1 B LEU 0.750 1 ATOM 108 C CB . LEU 22 22 ? A 33.532 12.887 39.659 1 1 B LEU 0.750 1 ATOM 109 C CG . LEU 22 22 ? A 34.719 12.943 40.639 1 1 B LEU 0.750 1 ATOM 110 C CD1 . LEU 22 22 ? A 34.415 12.088 41.881 1 1 B LEU 0.750 1 ATOM 111 C CD2 . LEU 22 22 ? A 36.042 12.514 39.984 1 1 B LEU 0.750 1 ATOM 112 N N . GLN 23 23 ? A 31.329 13.849 37.613 1 1 B GLN 0.760 1 ATOM 113 C CA . GLN 23 23 ? A 30.300 13.695 36.605 1 1 B GLN 0.760 1 ATOM 114 C C . GLN 23 23 ? A 30.558 14.528 35.369 1 1 B GLN 0.760 1 ATOM 115 O O . GLN 23 23 ? A 30.389 14.032 34.267 1 1 B GLN 0.760 1 ATOM 116 C CB . GLN 23 23 ? A 28.891 13.947 37.173 1 1 B GLN 0.760 1 ATOM 117 C CG . GLN 23 23 ? A 28.514 12.887 38.230 1 1 B GLN 0.760 1 ATOM 118 C CD . GLN 23 23 ? A 27.117 13.131 38.792 1 1 B GLN 0.760 1 ATOM 119 O OE1 . GLN 23 23 ? A 26.601 14.245 38.830 1 1 B GLN 0.760 1 ATOM 120 N NE2 . GLN 23 23 ? A 26.467 12.045 39.275 1 1 B GLN 0.760 1 ATOM 121 N N . GLY 24 24 ? A 31.046 15.780 35.496 1 1 B GLY 0.720 1 ATOM 122 C CA . GLY 24 24 ? A 31.391 16.604 34.338 1 1 B GLY 0.720 1 ATOM 123 C C . GLY 24 24 ? A 32.535 16.098 33.478 1 1 B GLY 0.720 1 ATOM 124 O O . GLY 24 24 ? A 32.540 16.284 32.268 1 1 B GLY 0.720 1 ATOM 125 N N . TYR 25 25 ? A 33.541 15.419 34.069 1 1 B TYR 0.600 1 ATOM 126 C CA . TYR 25 25 ? A 34.541 14.629 33.346 1 1 B TYR 0.600 1 ATOM 127 C C . TYR 25 25 ? A 33.966 13.384 32.692 1 1 B TYR 0.600 1 ATOM 128 O O . TYR 25 25 ? A 34.365 13.013 31.588 1 1 B TYR 0.600 1 ATOM 129 C CB . TYR 25 25 ? A 35.726 14.171 34.231 1 1 B TYR 0.600 1 ATOM 130 C CG . TYR 25 25 ? A 36.772 15.240 34.340 1 1 B TYR 0.600 1 ATOM 131 C CD1 . TYR 25 25 ? A 36.670 16.230 35.318 1 1 B TYR 0.600 1 ATOM 132 C CD2 . TYR 25 25 ? A 37.876 15.264 33.471 1 1 B TYR 0.600 1 ATOM 133 C CE1 . TYR 25 25 ? A 37.636 17.237 35.420 1 1 B TYR 0.600 1 ATOM 134 C CE2 . TYR 25 25 ? A 38.857 16.261 33.584 1 1 B TYR 0.600 1 ATOM 135 C CZ . TYR 25 25 ? A 38.733 17.251 34.563 1 1 B TYR 0.600 1 ATOM 136 O OH . TYR 25 25 ? A 39.703 18.259 34.713 1 1 B TYR 0.600 1 ATOM 137 N N . GLY 26 26 ? A 32.996 12.717 33.357 1 1 B GLY 0.720 1 ATOM 138 C CA . GLY 26 26 ? A 32.271 11.566 32.820 1 1 B GLY 0.720 1 ATOM 139 C C . GLY 26 26 ? A 31.428 11.968 31.628 1 1 B GLY 0.720 1 ATOM 140 O O . GLY 26 26 ? A 31.458 11.332 30.576 1 1 B GLY 0.720 1 ATOM 141 N N . ASP 27 27 ? A 30.741 13.119 31.748 1 1 B ASP 0.450 1 ATOM 142 C CA . ASP 27 27 ? A 30.062 13.803 30.660 1 1 B ASP 0.450 1 ATOM 143 C C . ASP 27 27 ? A 31.011 14.555 29.719 1 1 B ASP 0.450 1 ATOM 144 O O . ASP 27 27 ? A 30.596 15.143 28.727 1 1 B ASP 0.450 1 ATOM 145 C CB . ASP 27 27 ? A 29.047 14.906 31.064 1 1 B ASP 0.450 1 ATOM 146 C CG . ASP 27 27 ? A 27.764 14.444 31.723 1 1 B ASP 0.450 1 ATOM 147 O OD1 . ASP 27 27 ? A 27.425 13.240 31.620 1 1 B ASP 0.450 1 ATOM 148 O OD2 . ASP 27 27 ? A 27.057 15.349 32.242 1 1 B ASP 0.450 1 ATOM 149 N N . GLY 28 28 ? A 32.316 14.650 29.974 1 1 B GLY 0.470 1 ATOM 150 C CA . GLY 28 28 ? A 33.267 15.067 28.953 1 1 B GLY 0.470 1 ATOM 151 C C . GLY 28 28 ? A 33.790 13.914 28.136 1 1 B GLY 0.470 1 ATOM 152 O O . GLY 28 28 ? A 34.070 14.066 26.952 1 1 B GLY 0.470 1 ATOM 153 N N . GLN 29 29 ? A 33.916 12.712 28.731 1 1 B GLN 0.470 1 ATOM 154 C CA . GLN 29 29 ? A 34.336 11.500 28.044 1 1 B GLN 0.470 1 ATOM 155 C C . GLN 29 29 ? A 33.375 10.977 26.973 1 1 B GLN 0.470 1 ATOM 156 O O . GLN 29 29 ? A 33.791 10.644 25.863 1 1 B GLN 0.470 1 ATOM 157 C CB . GLN 29 29 ? A 34.618 10.405 29.096 1 1 B GLN 0.470 1 ATOM 158 C CG . GLN 29 29 ? A 35.091 9.060 28.499 1 1 B GLN 0.470 1 ATOM 159 C CD . GLN 29 29 ? A 35.429 8.051 29.594 1 1 B GLN 0.470 1 ATOM 160 O OE1 . GLN 29 29 ? A 34.674 7.843 30.543 1 1 B GLN 0.470 1 ATOM 161 N NE2 . GLN 29 29 ? A 36.589 7.367 29.455 1 1 B GLN 0.470 1 ATOM 162 N N . GLY 30 30 ? A 32.055 10.924 27.254 1 1 B GLY 0.380 1 ATOM 163 C CA . GLY 30 30 ? A 31.021 10.642 26.241 1 1 B GLY 0.380 1 ATOM 164 C C . GLY 30 30 ? A 31.027 11.465 24.950 1 1 B GLY 0.380 1 ATOM 165 O O . GLY 30 30 ? A 31.119 10.883 23.868 1 1 B GLY 0.380 1 ATOM 166 N N . PRO 31 31 ? A 30.988 12.797 25.003 1 1 B PRO 0.370 1 ATOM 167 C CA . PRO 31 31 ? A 31.099 13.703 23.860 1 1 B PRO 0.370 1 ATOM 168 C C . PRO 31 31 ? A 32.374 13.547 23.085 1 1 B PRO 0.370 1 ATOM 169 O O . PRO 31 31 ? A 32.373 13.787 21.885 1 1 B PRO 0.370 1 ATOM 170 C CB . PRO 31 31 ? A 31.073 15.117 24.441 1 1 B PRO 0.370 1 ATOM 171 C CG . PRO 31 31 ? A 30.501 14.980 25.840 1 1 B PRO 0.370 1 ATOM 172 C CD . PRO 31 31 ? A 30.637 13.506 26.224 1 1 B PRO 0.370 1 ATOM 173 N N . VAL 32 32 ? A 33.497 13.197 23.736 1 1 B VAL 0.370 1 ATOM 174 C CA . VAL 32 32 ? A 34.718 12.922 22.994 1 1 B VAL 0.370 1 ATOM 175 C C . VAL 32 32 ? A 34.535 11.688 22.134 1 1 B VAL 0.370 1 ATOM 176 O O . VAL 32 32 ? A 34.774 11.723 20.929 1 1 B VAL 0.370 1 ATOM 177 C CB . VAL 32 32 ? A 35.956 12.781 23.869 1 1 B VAL 0.370 1 ATOM 178 C CG1 . VAL 32 32 ? A 37.166 12.296 23.035 1 1 B VAL 0.370 1 ATOM 179 C CG2 . VAL 32 32 ? A 36.268 14.165 24.467 1 1 B VAL 0.370 1 ATOM 180 N N . THR 33 33 ? A 34.011 10.591 22.724 1 1 B THR 0.410 1 ATOM 181 C CA . THR 33 33 ? A 33.728 9.347 22.011 1 1 B THR 0.410 1 ATOM 182 C C . THR 33 33 ? A 32.730 9.536 20.883 1 1 B THR 0.410 1 ATOM 183 O O . THR 33 33 ? A 32.967 9.098 19.754 1 1 B THR 0.410 1 ATOM 184 C CB . THR 33 33 ? A 33.233 8.245 22.942 1 1 B THR 0.410 1 ATOM 185 O OG1 . THR 33 33 ? A 34.244 7.918 23.885 1 1 B THR 0.410 1 ATOM 186 C CG2 . THR 33 33 ? A 32.913 6.931 22.211 1 1 B THR 0.410 1 ATOM 187 N N . ASP 34 34 ? A 31.620 10.259 21.143 1 1 B ASP 0.370 1 ATOM 188 C CA . ASP 34 34 ? A 30.615 10.594 20.154 1 1 B ASP 0.370 1 ATOM 189 C C . ASP 34 34 ? A 31.139 11.486 19.029 1 1 B ASP 0.370 1 ATOM 190 O O . ASP 34 34 ? A 30.930 11.196 17.847 1 1 B ASP 0.370 1 ATOM 191 C CB . ASP 34 34 ? A 29.397 11.261 20.842 1 1 B ASP 0.370 1 ATOM 192 C CG . ASP 34 34 ? A 28.629 10.261 21.698 1 1 B ASP 0.370 1 ATOM 193 O OD1 . ASP 34 34 ? A 28.870 9.035 21.553 1 1 B ASP 0.370 1 ATOM 194 O OD2 . ASP 34 34 ? A 27.765 10.728 22.481 1 1 B ASP 0.370 1 ATOM 195 N N . THR 35 35 ? A 31.894 12.562 19.363 1 1 B THR 0.450 1 ATOM 196 C CA . THR 35 35 ? A 32.517 13.476 18.392 1 1 B THR 0.450 1 ATOM 197 C C . THR 35 35 ? A 33.511 12.765 17.496 1 1 B THR 0.450 1 ATOM 198 O O . THR 35 35 ? A 33.503 12.935 16.276 1 1 B THR 0.450 1 ATOM 199 C CB . THR 35 35 ? A 33.220 14.688 19.016 1 1 B THR 0.450 1 ATOM 200 O OG1 . THR 35 35 ? A 32.275 15.567 19.605 1 1 B THR 0.450 1 ATOM 201 C CG2 . THR 35 35 ? A 33.954 15.570 17.991 1 1 B THR 0.450 1 ATOM 202 N N . SER 36 36 ? A 34.369 11.888 18.063 1 1 B SER 0.580 1 ATOM 203 C CA . SER 36 36 ? A 35.312 11.067 17.305 1 1 B SER 0.580 1 ATOM 204 C C . SER 36 36 ? A 34.639 10.143 16.315 1 1 B SER 0.580 1 ATOM 205 O O . SER 36 36 ? A 35.074 9.969 15.179 1 1 B SER 0.580 1 ATOM 206 C CB . SER 36 36 ? A 36.135 10.113 18.202 1 1 B SER 0.580 1 ATOM 207 O OG . SER 36 36 ? A 37.052 10.826 19.027 1 1 B SER 0.580 1 ATOM 208 N N . ALA 37 37 ? A 33.534 9.511 16.746 1 1 B ALA 0.640 1 ATOM 209 C CA . ALA 37 37 ? A 32.728 8.662 15.911 1 1 B ALA 0.640 1 ATOM 210 C C . ALA 37 37 ? A 32.017 9.401 14.775 1 1 B ALA 0.640 1 ATOM 211 O O . ALA 37 37 ? A 31.971 8.911 13.648 1 1 B ALA 0.640 1 ATOM 212 C CB . ALA 37 37 ? A 31.743 7.906 16.819 1 1 B ALA 0.640 1 ATOM 213 N N . GLU 38 38 ? A 31.459 10.607 15.040 1 1 B GLU 0.580 1 ATOM 214 C CA . GLU 38 38 ? A 30.847 11.456 14.026 1 1 B GLU 0.580 1 ATOM 215 C C . GLU 38 38 ? A 31.831 11.948 12.995 1 1 B GLU 0.580 1 ATOM 216 O O . GLU 38 38 ? A 31.562 11.934 11.797 1 1 B GLU 0.580 1 ATOM 217 C CB . GLU 38 38 ? A 30.033 12.631 14.634 1 1 B GLU 0.580 1 ATOM 218 C CG . GLU 38 38 ? A 29.175 13.392 13.584 1 1 B GLU 0.580 1 ATOM 219 C CD . GLU 38 38 ? A 28.149 12.498 12.885 1 1 B GLU 0.580 1 ATOM 220 O OE1 . GLU 38 38 ? A 27.623 12.915 11.830 1 1 B GLU 0.580 1 ATOM 221 O OE2 . GLU 38 38 ? A 27.891 11.367 13.378 1 1 B GLU 0.580 1 ATOM 222 N N . LEU 39 39 ? A 33.050 12.310 13.434 1 1 B LEU 0.770 1 ATOM 223 C CA . LEU 39 39 ? A 34.124 12.684 12.538 1 1 B LEU 0.770 1 ATOM 224 C C . LEU 39 39 ? A 34.460 11.590 11.528 1 1 B LEU 0.770 1 ATOM 225 O O . LEU 39 39 ? A 34.548 11.841 10.329 1 1 B LEU 0.770 1 ATOM 226 C CB . LEU 39 39 ? A 35.387 13.013 13.360 1 1 B LEU 0.770 1 ATOM 227 C CG . LEU 39 39 ? A 36.612 13.412 12.517 1 1 B LEU 0.770 1 ATOM 228 C CD1 . LEU 39 39 ? A 36.350 14.689 11.703 1 1 B LEU 0.770 1 ATOM 229 C CD2 . LEU 39 39 ? A 37.851 13.547 13.412 1 1 B LEU 0.770 1 ATOM 230 N N . HIS 40 40 ? A 34.567 10.326 11.994 1 1 B HIS 0.730 1 ATOM 231 C CA . HIS 40 40 ? A 34.758 9.157 11.148 1 1 B HIS 0.730 1 ATOM 232 C C . HIS 40 40 ? A 33.642 8.964 10.124 1 1 B HIS 0.730 1 ATOM 233 O O . HIS 40 40 ? A 33.882 8.695 8.948 1 1 B HIS 0.730 1 ATOM 234 C CB . HIS 40 40 ? A 34.831 7.884 12.029 1 1 B HIS 0.730 1 ATOM 235 C CG . HIS 40 40 ? A 34.960 6.602 11.274 1 1 B HIS 0.730 1 ATOM 236 N ND1 . HIS 40 40 ? A 36.169 6.301 10.693 1 1 B HIS 0.730 1 ATOM 237 C CD2 . HIS 40 40 ? A 34.037 5.652 10.970 1 1 B HIS 0.730 1 ATOM 238 C CE1 . HIS 40 40 ? A 35.965 5.177 10.042 1 1 B HIS 0.730 1 ATOM 239 N NE2 . HIS 40 40 ? A 34.690 4.735 10.176 1 1 B HIS 0.730 1 ATOM 240 N N . ARG 41 41 ? A 32.371 9.123 10.549 1 1 B ARG 0.540 1 ATOM 241 C CA . ARG 41 41 ? A 31.225 9.034 9.661 1 1 B ARG 0.540 1 ATOM 242 C C . ARG 41 41 ? A 31.157 10.136 8.627 1 1 B ARG 0.540 1 ATOM 243 O O . ARG 41 41 ? A 30.910 9.868 7.452 1 1 B ARG 0.540 1 ATOM 244 C CB . ARG 41 41 ? A 29.899 8.996 10.443 1 1 B ARG 0.540 1 ATOM 245 C CG . ARG 41 41 ? A 29.749 7.706 11.263 1 1 B ARG 0.540 1 ATOM 246 C CD . ARG 41 41 ? A 28.381 7.564 11.935 1 1 B ARG 0.540 1 ATOM 247 N NE . ARG 41 41 ? A 28.253 8.625 12.982 1 1 B ARG 0.540 1 ATOM 248 C CZ . ARG 41 41 ? A 28.553 8.477 14.279 1 1 B ARG 0.540 1 ATOM 249 N NH1 . ARG 41 41 ? A 29.128 7.376 14.736 1 1 B ARG 0.540 1 ATOM 250 N NH2 . ARG 41 41 ? A 28.351 9.509 15.086 1 1 B ARG 0.540 1 ATOM 251 N N . LEU 42 42 ? A 31.418 11.401 9.020 1 1 B LEU 0.550 1 ATOM 252 C CA . LEU 42 42 ? A 31.505 12.500 8.078 1 1 B LEU 0.550 1 ATOM 253 C C . LEU 42 42 ? A 32.604 12.314 7.068 1 1 B LEU 0.550 1 ATOM 254 O O . LEU 42 42 ? A 32.364 12.466 5.878 1 1 B LEU 0.550 1 ATOM 255 C CB . LEU 42 42 ? A 31.664 13.875 8.762 1 1 B LEU 0.550 1 ATOM 256 C CG . LEU 42 42 ? A 30.356 14.417 9.364 1 1 B LEU 0.550 1 ATOM 257 C CD1 . LEU 42 42 ? A 30.628 15.741 10.092 1 1 B LEU 0.550 1 ATOM 258 C CD2 . LEU 42 42 ? A 29.261 14.624 8.301 1 1 B LEU 0.550 1 ATOM 259 N N . CYS 43 43 ? A 33.810 11.883 7.488 1 1 B CYS 0.530 1 ATOM 260 C CA . CYS 43 43 ? A 34.879 11.578 6.556 1 1 B CYS 0.530 1 ATOM 261 C C . CYS 43 43 ? A 34.470 10.527 5.534 1 1 B CYS 0.530 1 ATOM 262 O O . CYS 43 43 ? A 34.645 10.728 4.338 1 1 B CYS 0.530 1 ATOM 263 C CB . CYS 43 43 ? A 36.148 11.109 7.310 1 1 B CYS 0.530 1 ATOM 264 S SG . CYS 43 43 ? A 36.916 12.437 8.296 1 1 B CYS 0.530 1 ATOM 265 N N . GLY 44 44 ? A 33.804 9.437 5.976 1 1 B GLY 0.570 1 ATOM 266 C CA . GLY 44 44 ? A 33.395 8.372 5.067 1 1 B GLY 0.570 1 ATOM 267 C C . GLY 44 44 ? A 32.289 8.743 4.111 1 1 B GLY 0.570 1 ATOM 268 O O . GLY 44 44 ? A 32.332 8.386 2.942 1 1 B GLY 0.570 1 ATOM 269 N N . CYS 45 45 ? A 31.267 9.492 4.565 1 1 B CYS 0.570 1 ATOM 270 C CA . CYS 45 45 ? A 30.223 10.010 3.690 1 1 B CYS 0.570 1 ATOM 271 C C . CYS 45 45 ? A 30.696 11.079 2.715 1 1 B CYS 0.570 1 ATOM 272 O O . CYS 45 45 ? A 30.161 11.185 1.622 1 1 B CYS 0.570 1 ATOM 273 C CB . CYS 45 45 ? A 29.019 10.577 4.481 1 1 B CYS 0.570 1 ATOM 274 S SG . CYS 45 45 ? A 28.102 9.298 5.398 1 1 B CYS 0.570 1 ATOM 275 N N . LEU 46 46 ? A 31.671 11.925 3.110 1 1 B LEU 0.600 1 ATOM 276 C CA . LEU 46 46 ? A 32.299 12.906 2.234 1 1 B LEU 0.600 1 ATOM 277 C C . LEU 46 46 ? A 33.248 12.348 1.177 1 1 B LEU 0.600 1 ATOM 278 O O . LEU 46 46 ? A 33.407 12.945 0.119 1 1 B LEU 0.600 1 ATOM 279 C CB . LEU 46 46 ? A 33.089 13.957 3.047 1 1 B LEU 0.600 1 ATOM 280 C CG . LEU 46 46 ? A 32.229 14.880 3.930 1 1 B LEU 0.600 1 ATOM 281 C CD1 . LEU 46 46 ? A 33.141 15.708 4.850 1 1 B LEU 0.600 1 ATOM 282 C CD2 . LEU 46 46 ? A 31.278 15.771 3.115 1 1 B LEU 0.600 1 ATOM 283 N N . GLU 47 47 ? A 33.952 11.232 1.470 1 1 B GLU 0.560 1 ATOM 284 C CA . GLU 47 47 ? A 34.712 10.467 0.493 1 1 B GLU 0.560 1 ATOM 285 C C . GLU 47 47 ? A 33.874 9.771 -0.581 1 1 B GLU 0.560 1 ATOM 286 O O . GLU 47 47 ? A 34.311 9.640 -1.721 1 1 B GLU 0.560 1 ATOM 287 C CB . GLU 47 47 ? A 35.544 9.365 1.187 1 1 B GLU 0.560 1 ATOM 288 C CG . GLU 47 47 ? A 36.761 9.879 1.992 1 1 B GLU 0.560 1 ATOM 289 C CD . GLU 47 47 ? A 37.494 8.767 2.744 1 1 B GLU 0.560 1 ATOM 290 O OE1 . GLU 47 47 ? A 37.044 7.593 2.705 1 1 B GLU 0.560 1 ATOM 291 O OE2 . GLU 47 47 ? A 38.535 9.101 3.369 1 1 B GLU 0.560 1 ATOM 292 N N . LEU 48 48 ? A 32.691 9.254 -0.182 1 1 B LEU 0.470 1 ATOM 293 C CA . LEU 48 48 ? A 31.695 8.655 -1.060 1 1 B LEU 0.470 1 ATOM 294 C C . LEU 48 48 ? A 30.923 9.630 -2.003 1 1 B LEU 0.470 1 ATOM 295 O O . LEU 48 48 ? A 31.068 10.875 -1.903 1 1 B LEU 0.470 1 ATOM 296 C CB . LEU 48 48 ? A 30.621 7.905 -0.219 1 1 B LEU 0.470 1 ATOM 297 C CG . LEU 48 48 ? A 31.075 6.620 0.506 1 1 B LEU 0.470 1 ATOM 298 C CD1 . LEU 48 48 ? A 29.959 6.111 1.440 1 1 B LEU 0.470 1 ATOM 299 C CD2 . LEU 48 48 ? A 31.499 5.513 -0.474 1 1 B LEU 0.470 1 ATOM 300 O OXT . LEU 48 48 ? A 30.151 9.093 -2.851 1 1 B LEU 0.470 1 # # loop_ _atom_type.symbol C N O S # # loop_ _ma_qa_metric.id _ma_qa_metric.name _ma_qa_metric.description _ma_qa_metric.type _ma_qa_metric.mode _ma_qa_metric.type_other_details _ma_qa_metric.software_group_id 1 QMEANDisCo 'Predicted accuracy according to all-atom lDDT in [0,1].' 'pLDDT all-atom in [0,1]' local . 5 2 QMEANDisCo 'Predicted accuracy according to all-atom lDDT in [0,1].' 'pLDDT all-atom in [0,1]' global . 5 3 GMQE 'Global Model Quality Estimate of the model accuracy, calculated by SWISS-MODEL.' 'normalized score' global . 6 # # loop_ _ma_qa_metric_global.ordinal_id _ma_qa_metric_global.model_id _ma_qa_metric_global.metric_id _ma_qa_metric_global.metric_value 1 1 2 0.551 2 1 3 0.070 # # loop_ _ma_qa_metric_local.ordinal_id _ma_qa_metric_local.model_id _ma_qa_metric_local.label_asym_id _ma_qa_metric_local.label_seq_id _ma_qa_metric_local.label_comp_id _ma_qa_metric_local.metric_id _ma_qa_metric_local.metric_value 1 1 A 8 LEU 1 0.570 2 1 A 9 LYS 1 0.620 3 1 A 10 VAL 1 0.470 4 1 A 11 THR 1 0.490 5 1 A 12 LYS 1 0.490 6 1 A 13 ASP 1 0.520 7 1 A 14 LEU 1 0.520 8 1 A 15 ARG 1 0.490 9 1 A 16 ALA 1 0.560 10 1 A 17 ALA 1 0.570 11 1 A 18 VAL 1 0.550 12 1 A 19 SER 1 0.560 13 1 A 20 ALA 1 0.560 14 1 A 21 ILE 1 0.630 15 1 A 22 LEU 1 0.750 16 1 A 23 GLN 1 0.760 17 1 A 24 GLY 1 0.720 18 1 A 25 TYR 1 0.600 19 1 A 26 GLY 1 0.720 20 1 A 27 ASP 1 0.450 21 1 A 28 GLY 1 0.470 22 1 A 29 GLN 1 0.470 23 1 A 30 GLY 1 0.380 24 1 A 31 PRO 1 0.370 25 1 A 32 VAL 1 0.370 26 1 A 33 THR 1 0.410 27 1 A 34 ASP 1 0.370 28 1 A 35 THR 1 0.450 29 1 A 36 SER 1 0.580 30 1 A 37 ALA 1 0.640 31 1 A 38 GLU 1 0.580 32 1 A 39 LEU 1 0.770 33 1 A 40 HIS 1 0.730 34 1 A 41 ARG 1 0.540 35 1 A 42 LEU 1 0.550 36 1 A 43 CYS 1 0.530 37 1 A 44 GLY 1 0.570 38 1 A 45 CYS 1 0.570 39 1 A 46 LEU 1 0.600 40 1 A 47 GLU 1 0.560 41 1 A 48 LEU 1 0.470 # # loop_ _pdbx_data_usage.id _pdbx_data_usage.type _pdbx_data_usage.details _pdbx_data_usage.url 1 license ;This SWISS-MODEL protein model is copyright. 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