data_SMR-6d77f6ea6d1b0442df5f049eec76867b_2 _entry.id SMR-6d77f6ea6d1b0442df5f049eec76867b_2 _struct.entry_id SMR-6d77f6ea6d1b0442df5f049eec76867b_2 _struct.pdbx_model_details ;This model was generated unsupervised by the SWISS-MODEL homology-modelling pipeline for the SWISS-MODEL Repository, a database of annotated 3D protein structure models. The modelled monomer covers following UniProtKB entries: - A0A1R1KS96/ A0A1R1KS96_ECOLX, N-glycosidase YbiA - A0A1X3JJC8/ A0A1X3JJC8_ECOLX, N-glycosidase YbiA - A0A7I6GZH3/ A0A7I6GZH3_ECOHS, N-glycosidase YbiA - A0A7Z8BCV6/ A0A7Z8BCV6_SHISO, N-glycosidase YbiA - A0A979H2I4/ A0A979H2I4_ECOSE, N-glycosidase YbiA - A0AAD2V9E6/ A0AAD2V9E6_ECOLX, N-glycosidase YbiA - A0AAN4CNS8/ A0AAN4CNS8_SHIDY, N-glycosidase YbiA - P30176/ RIBX_ECOLI, N-glycosidase YbiA Estimated model accuracy of this model is 0.048, calculated by SWISS-MODEL as Global Model Quality Estimate (GMQE). ; _struct.pdbx_structure_determination_methodology computational _struct.title 'Model for UniProtKB entries A0A1R1KS96, A0A1X3JJC8, A0A7I6GZH3, A0A7Z8BCV6, A0A979H2I4, A0AAD2V9E6, A0AAN4CNS8, P30176' _audit_conform.dict_location https://raw.githubusercontent.com/ihmwg/ModelCIF/d18ba38/base/mmcif_ma-core.dic _audit_conform.dict_name mmcif_ma.dic _audit_conform.dict_version 1.4.6 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary 'The SWISS-MODEL Repository - new features and functionality' 'Nucleic Acids Res.' 45 D313 D319 2017 27899672 10.1093/nar/gkw1132 2 'SWISS-MODEL: homology modelling of protein structures and complexes' 'Nucleic Acids Res.' 46 W296 W303 2018 29788355 10.1093/nar/gky427 3 'ProMod3 - A versatile homology modelling toolbox' 'PLoS Comput. Biol.' 17(1) 1 18 2021 33507980 10.1371/journal.pcbi.1008667 4 'QMEANDisCo - distance constraints applied on model quality estimation' Bioinformatics 36 1765 1771 2020 31697312 10.1093/bioinformatics/btz828 5 'OpenStructure: an integrated software framework for computational structural biology' 'Acta Crystallogr., Sect. D: Biol. Crystallogr.' 69 701 709 2013 23633579 10.1107/S0907444913007051 6 'BLAST+: architecture and applications' 'BMC Bioinf.' 10 421 . 2009 20003500 10.1186/1471-2105-10-421 7 'HH-suite3 for fast remote homology detection and deep protein annotation' 'BMC Bioinf.' 20 473 . 2019 31521110 10.1186/s12859-019-3019-7 # # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Bienert, S.' 1 primary 'Waterhouse, A.' 2 primary 'de Beer, T.A.P.' 3 primary 'Tauriello, G.' 4 primary 'Studer, G.' 5 primary 'Bordoli, L.' 6 primary 'Schwede, T.' 7 2 'Waterhouse, A.' 8 2 'Bertoni, M.' 9 2 'Bienert, S.' 10 2 'Studer, G.' 11 2 'Tauriello, G.' 12 2 'Gumienny, R.' 13 2 'Heer, F.T.' 14 2 'de Beer, T.A.P.' 15 2 'Rempfer, C.' 16 2 'Bordoli, L.' 17 2 'Lepore, R.' 18 2 'Schwede, T.' 19 3 'Studer, G.' 20 3 'Tauriello, G.' 21 3 'Bienert, S.' 22 3 'Biasini, M.' 23 3 'Johner, N.' 24 3 'Schwede, T.' 25 4 'Studer, G.' 26 4 'Rempfer, C.' 27 4 'Waterhouse, A.M.' 28 4 'Gumienny, R.' 29 4 'Haas, J.' 30 4 'Schwede, T.' 31 5 'Biasini, M.' 32 5 'Schmidt, T.' 33 5 'Bienert, S.' 34 5 'Mariani, V.' 35 5 'Studer, G.' 36 5 'Haas, J.' 37 5 'Johner, N.' 38 5 'Schenk, A.D.' 39 5 'Philippsen, A.' 40 5 'Schwede, T.' 41 6 'Camacho, C.' 42 6 'Coulouris, G.' 43 6 'Avagyan, V.' 44 6 'Ma, N.' 45 6 'Papadopoulos, J.' 46 6 'Bealer, K.' 47 6 'Madden, T.L.' 48 7 'Steinegger, M.' 49 7 'Meier, M.' 50 7 'Mirdita, M.' 51 7 'Vohringer, H.' 52 7 'Haunsberger, S.J.' 53 7 'Soding, J.' 54 # # loop_ _software.pdbx_ordinal _software.name _software.classification _software.description _software.version _software.type _software.location _software.citation_id 1 SWISS-MODEL 'model building' 'Homology modelling web service' c59120ae913c122b22dc2ebae5eb59cce9b022ff package https://swissmodel.expasy.org 2 2 ProMod3 'model building' 'Modular homology modelling engine' 3.4.1 library https://git.scicore.unibas.ch/schwede/ProMod3 3 3 QMEAN 'model building' 'QMEAN - Qualitative Model Energy ANalysis' 4.3.1 library https://git.scicore.unibas.ch/schwede/QMEAN 4 4 OpenStructure 'data processing' 'Open-Source Computational Structural Biology Framework' 2.8.0 package https://openstructure.org/ 5 5 BLAST 'data collection' . 2.14.1 package https://blast.ncbi.nlm.nih.gov 6 6 HH-suite 'data collection' 'HH-suite3 for sensitive sequence searching' 3.2.0 package https://github.com/soedinglab/hh-suite 7 # # loop_ _ma_software_group.ordinal_id _ma_software_group.group_id _ma_software_group.software_id _ma_software_group.parameter_group_id 1 1 6 . 2 2 1 . 3 2 4 . 4 2 5 . 5 2 6 . 6 3 1 . 7 3 4 . 8 4 1 . 9 4 2 . 10 4 4 . 11 5 3 . 12 6 1 . 13 6 3 . 14 6 4 . # # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Bienert, S.' 1 'Waterhouse, A.' 2 'de Beer, T.A.P.' 3 'Tauriello, G.' 4 'Studer, G.' 5 'Bordoli, L.' 6 'Schwede, T.' 7 # # loop_ _chem_comp.id _chem_comp.type _chem_comp.name _chem_comp.formula _chem_comp.formula_weight _chem_comp.ma_provenance ALA 'L-peptide linking' ALANINE 'C3 H7 N O2' 89.094 'CCD Core' ARG 'L-peptide linking' ARGININE 'C6 H15 N4 O2 1' 175.212 'CCD Core' ASN 'L-peptide linking' ASPARAGINE 'C4 H8 N2 O3' 132.119 'CCD Core' ASP 'L-peptide linking' 'ASPARTIC ACID' 'C4 H7 N O4' 133.103 'CCD Core' GLN 'L-peptide linking' GLUTAMINE 'C5 H10 N2 O3' 146.146 'CCD Core' GLU 'L-peptide linking' 'GLUTAMIC ACID' 'C5 H9 N O4' 147.130 'CCD Core' GLY 'peptide linking' GLYCINE 'C2 H5 N O2' 75.067 'CCD Core' HIS 'L-peptide linking' HISTIDINE 'C6 H10 N3 O2 1' 156.165 'CCD Core' ILE 'L-peptide linking' ISOLEUCINE 'C6 H13 N O2' 131.175 'CCD Core' LEU 'L-peptide linking' LEUCINE 'C6 H13 N O2' 131.175 'CCD Core' LYS 'L-peptide linking' LYSINE 'C6 H15 N2 O2 1' 147.198 'CCD Core' MET 'L-peptide linking' METHIONINE 'C5 H11 N O2 S' 149.208 'CCD Core' PHE 'L-peptide linking' PHENYLALANINE 'C9 H11 N O2' 165.192 'CCD Core' PRO 'L-peptide linking' PROLINE 'C5 H9 N O2' 115.132 'CCD Core' SER 'L-peptide linking' SERINE 'C3 H7 N O3' 105.093 'CCD Core' THR 'L-peptide linking' THREONINE 'C4 H9 N O3' 119.120 'CCD Core' TRP 'L-peptide linking' TRYPTOPHAN 'C11 H12 N2 O2' 204.229 'CCD Core' TYR 'L-peptide linking' TYROSINE 'C9 H11 N O3' 181.191 'CCD Core' VAL 'L-peptide linking' VALINE 'C5 H11 N O2' 117.148 'CCD Core' # # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.details 1 polymer man . 21565.987 1 . # # loop_ _struct_ref.id _struct_ref.entity_id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_align_begin _struct_ref.pdbx_seq_one_letter_code _struct_ref.details 1 1 UNP RIBX_ECOLI P30176 1 ;MPVRAQRIQHVMQDTIINFYSTSDDYGDFSNFAAWPIKVDGKTWPTSEHYFQAQKFLDEKYREEIRRVSS PMVAARMGRDRSKPLRKNWESVKEQVMRKALRAKFEQHAELRALLLATAPAKLVEHTENDAYWGDGGHGK GKNRLGYLLMELREQLAIEK ; 'N-glycosidase YbiA' 2 1 UNP A0A7Z8BCV6_SHISO A0A7Z8BCV6 1 ;MPVRAQRIQHVMQDTIINFYSTSDDYGDFSNFAAWPIKVDGKTWPTSEHYFQAQKFLDEKYREEIRRVSS PMVAARMGRDRSKPLRKNWESVKEQVMRKALRAKFEQHAELRALLLATAPAKLVEHTENDAYWGDGGHGK GKNRLGYLLMELREQLAIEK ; 'N-glycosidase YbiA' 3 1 UNP A0A1R1KS96_ECOLX A0A1R1KS96 1 ;MPVRAQRIQHVMQDTIINFYSTSDDYGDFSNFAAWPIKVDGKTWPTSEHYFQAQKFLDEKYREEIRRVSS PMVAARMGRDRSKPLRKNWESVKEQVMRKALRAKFEQHAELRALLLATAPAKLVEHTENDAYWGDGGHGK GKNRLGYLLMELREQLAIEK ; 'N-glycosidase YbiA' 4 1 UNP A0A979H2I4_ECOSE A0A979H2I4 1 ;MPVRAQRIQHVMQDTIINFYSTSDDYGDFSNFAAWPIKVDGKTWPTSEHYFQAQKFLDEKYREEIRRVSS PMVAARMGRDRSKPLRKNWESVKEQVMRKALRAKFEQHAELRALLLATAPAKLVEHTENDAYWGDGGHGK GKNRLGYLLMELREQLAIEK ; 'N-glycosidase YbiA' 5 1 UNP A0A1X3JJC8_ECOLX A0A1X3JJC8 1 ;MPVRAQRIQHVMQDTIINFYSTSDDYGDFSNFAAWPIKVDGKTWPTSEHYFQAQKFLDEKYREEIRRVSS PMVAARMGRDRSKPLRKNWESVKEQVMRKALRAKFEQHAELRALLLATAPAKLVEHTENDAYWGDGGHGK GKNRLGYLLMELREQLAIEK ; 'N-glycosidase YbiA' 6 1 UNP A0AAD2V9E6_ECOLX A0AAD2V9E6 1 ;MPVRAQRIQHVMQDTIINFYSTSDDYGDFSNFAAWPIKVDGKTWPTSEHYFQAQKFLDEKYREEIRRVSS PMVAARMGRDRSKPLRKNWESVKEQVMRKALRAKFEQHAELRALLLATAPAKLVEHTENDAYWGDGGHGK GKNRLGYLLMELREQLAIEK ; 'N-glycosidase YbiA' 7 1 UNP A0A7I6GZH3_ECOHS A0A7I6GZH3 1 ;MPVRAQRIQHVMQDTIINFYSTSDDYGDFSNFAAWPIKVDGKTWPTSEHYFQAQKFLDEKYREEIRRVSS PMVAARMGRDRSKPLRKNWESVKEQVMRKALRAKFEQHAELRALLLATAPAKLVEHTENDAYWGDGGHGK GKNRLGYLLMELREQLAIEK ; 'N-glycosidase YbiA' 8 1 UNP A0AAN4CNS8_SHIDY A0AAN4CNS8 1 ;MPVRAQRIQHVMQDTIINFYSTSDDYGDFSNFAAWPIKVDGKTWPTSEHYFQAQKFLDEKYREEIRRVSS PMVAARMGRDRSKPLRKNWESVKEQVMRKALRAKFEQHAELRALLLATAPAKLVEHTENDAYWGDGGHGK GKNRLGYLLMELREQLAIEK ; 'N-glycosidase YbiA' # # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.seq_align_beg _struct_ref_seq.seq_align_end _struct_ref_seq.db_align_beg _struct_ref_seq.db_align_end 1 1 1 160 1 160 2 2 1 160 1 160 3 3 1 160 1 160 4 4 1 160 1 160 5 5 1 160 1 160 6 6 1 160 1 160 7 7 1 160 1 160 8 8 1 160 1 160 # # loop_ _ma_target_ref_db_details.target_entity_id _ma_target_ref_db_details.db_name _ma_target_ref_db_details.db_name_other_details _ma_target_ref_db_details.db_code _ma_target_ref_db_details.db_accession _ma_target_ref_db_details.seq_db_isoform _ma_target_ref_db_details.seq_db_align_begin _ma_target_ref_db_details.seq_db_align_end _ma_target_ref_db_details.ncbi_taxonomy_id _ma_target_ref_db_details.organism_scientific _ma_target_ref_db_details.seq_db_sequence_version_date _ma_target_ref_db_details.seq_db_sequence_checksum 1 UNP . RIBX_ECOLI P30176 . 1 160 83333 'Escherichia coli (strain K12)' 1993-04-01 28D6DA5C6748653C 1 UNP . A0A7Z8BCV6_SHISO A0A7Z8BCV6 . 1 160 624 'Shigella sonnei' 2021-06-02 28D6DA5C6748653C 1 UNP . A0A1R1KS96_ECOLX A0A1R1KS96 . 1 160 562 'Escherichia coli' 2017-04-12 28D6DA5C6748653C 1 UNP . A0A979H2I4_ECOSE A0A979H2I4 . 1 160 409438 'Escherichia coli (strain SE11)' 2023-02-22 28D6DA5C6748653C 1 UNP . A0A1X3JJC8_ECOLX A0A1X3JJC8 . 1 160 656397 'Escherichia coli H386' 2017-07-05 28D6DA5C6748653C 1 UNP . A0AAD2V9E6_ECOLX A0AAD2V9E6 . 1 160 1010802 'Escherichia coli O33' 2024-05-29 28D6DA5C6748653C 1 UNP . A0A7I6GZH3_ECOHS A0A7I6GZH3 . 1 160 331112 'Escherichia coli O9:H4 (strain HS)' 2021-04-07 28D6DA5C6748653C 1 UNP . A0AAN4CNS8_SHIDY A0AAN4CNS8 . 1 160 622 'Shigella dysenteriae' 2024-10-02 28D6DA5C6748653C # # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_strand_id _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can 1 polypeptide(L) no no A ;MPVRAQRIQHVMQDTIINFYSTSDDYGDFSNFAAWPIKVDGKTWPTSEHYFQAQKFLDEKYREEIRRVSS PMVAARMGRDRSKPLRKNWESVKEQVMRKALRAKFEQHAELRALLLATAPAKLVEHTENDAYWGDGGHGK GKNRLGYLLMELREQLAIEK ; ;MPVRAQRIQHVMQDTIINFYSTSDDYGDFSNFAAWPIKVDGKTWPTSEHYFQAQKFLDEKYREEIRRVSS PMVAARMGRDRSKPLRKNWESVKEQVMRKALRAKFEQHAELRALLLATAPAKLVEHTENDAYWGDGGHGK GKNRLGYLLMELREQLAIEK ; # # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET . 1 2 PRO . 1 3 VAL . 1 4 ARG . 1 5 ALA . 1 6 GLN . 1 7 ARG . 1 8 ILE . 1 9 GLN . 1 10 HIS . 1 11 VAL . 1 12 MET . 1 13 GLN . 1 14 ASP . 1 15 THR . 1 16 ILE . 1 17 ILE . 1 18 ASN . 1 19 PHE . 1 20 TYR . 1 21 SER . 1 22 THR . 1 23 SER . 1 24 ASP . 1 25 ASP . 1 26 TYR . 1 27 GLY . 1 28 ASP . 1 29 PHE . 1 30 SER . 1 31 ASN . 1 32 PHE . 1 33 ALA . 1 34 ALA . 1 35 TRP . 1 36 PRO . 1 37 ILE . 1 38 LYS . 1 39 VAL . 1 40 ASP . 1 41 GLY . 1 42 LYS . 1 43 THR . 1 44 TRP . 1 45 PRO . 1 46 THR . 1 47 SER . 1 48 GLU . 1 49 HIS . 1 50 TYR . 1 51 PHE . 1 52 GLN . 1 53 ALA . 1 54 GLN . 1 55 LYS . 1 56 PHE . 1 57 LEU . 1 58 ASP . 1 59 GLU . 1 60 LYS . 1 61 TYR . 1 62 ARG . 1 63 GLU . 1 64 GLU . 1 65 ILE . 1 66 ARG . 1 67 ARG . 1 68 VAL . 1 69 SER . 1 70 SER . 1 71 PRO . 1 72 MET . 1 73 VAL . 1 74 ALA . 1 75 ALA . 1 76 ARG . 1 77 MET . 1 78 GLY . 1 79 ARG . 1 80 ASP . 1 81 ARG . 1 82 SER . 1 83 LYS . 1 84 PRO . 1 85 LEU . 1 86 ARG . 1 87 LYS . 1 88 ASN . 1 89 TRP . 1 90 GLU . 1 91 SER . 1 92 VAL . 1 93 LYS . 1 94 GLU . 1 95 GLN . 1 96 VAL . 1 97 MET . 1 98 ARG . 1 99 LYS . 1 100 ALA . 1 101 LEU . 1 102 ARG . 1 103 ALA . 1 104 LYS . 1 105 PHE . 1 106 GLU . 1 107 GLN . 1 108 HIS . 1 109 ALA . 1 110 GLU . 1 111 LEU . 1 112 ARG . 1 113 ALA . 1 114 LEU . 1 115 LEU . 1 116 LEU . 1 117 ALA . 1 118 THR . 1 119 ALA . 1 120 PRO . 1 121 ALA . 1 122 LYS . 1 123 LEU . 1 124 VAL . 1 125 GLU . 1 126 HIS . 1 127 THR . 1 128 GLU . 1 129 ASN . 1 130 ASP . 1 131 ALA . 1 132 TYR . 1 133 TRP . 1 134 GLY . 1 135 ASP . 1 136 GLY . 1 137 GLY . 1 138 HIS . 1 139 GLY . 1 140 LYS . 1 141 GLY . 1 142 LYS . 1 143 ASN . 1 144 ARG . 1 145 LEU . 1 146 GLY . 1 147 TYR . 1 148 LEU . 1 149 LEU . 1 150 MET . 1 151 GLU . 1 152 LEU . 1 153 ARG . 1 154 GLU . 1 155 GLN . 1 156 LEU . 1 157 ALA . 1 158 ILE . 1 159 GLU . 1 160 LYS . # # loop_ _struct_asym.id _struct_asym.entity_id _struct_asym.details A 1 . # # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code A 1 1 MET 1 ? ? ? A . A 1 2 PRO 2 ? ? ? A . A 1 3 VAL 3 ? ? ? A . A 1 4 ARG 4 ? ? ? A . A 1 5 ALA 5 ? ? ? A . A 1 6 GLN 6 ? ? ? A . A 1 7 ARG 7 ? ? ? A . A 1 8 ILE 8 ? ? ? A . A 1 9 GLN 9 ? ? ? A . A 1 10 HIS 10 ? ? ? A . A 1 11 VAL 11 ? ? ? A . A 1 12 MET 12 ? ? ? A . A 1 13 GLN 13 ? ? ? A . A 1 14 ASP 14 ? ? ? A . A 1 15 THR 15 ? ? ? A . A 1 16 ILE 16 ? ? ? A . A 1 17 ILE 17 ? ? ? A . A 1 18 ASN 18 ? ? ? A . A 1 19 PHE 19 ? ? ? A . A 1 20 TYR 20 ? ? ? A . A 1 21 SER 21 ? ? ? A . A 1 22 THR 22 ? ? ? A . A 1 23 SER 23 ? ? ? A . A 1 24 ASP 24 ? ? ? A . A 1 25 ASP 25 ? ? ? A . A 1 26 TYR 26 ? ? ? A . A 1 27 GLY 27 ? ? ? A . A 1 28 ASP 28 ? ? ? A . A 1 29 PHE 29 ? ? ? A . A 1 30 SER 30 ? ? ? A . A 1 31 ASN 31 ? ? ? A . A 1 32 PHE 32 ? ? ? A . A 1 33 ALA 33 ? ? ? A . A 1 34 ALA 34 ? ? ? A . A 1 35 TRP 35 ? ? ? A . A 1 36 PRO 36 ? ? ? A . A 1 37 ILE 37 ? ? ? A . A 1 38 LYS 38 ? ? ? A . A 1 39 VAL 39 ? ? ? A . A 1 40 ASP 40 ? ? ? A . A 1 41 GLY 41 ? ? ? A . A 1 42 LYS 42 ? ? ? A . A 1 43 THR 43 ? ? ? A . A 1 44 TRP 44 ? ? ? A . A 1 45 PRO 45 ? ? ? A . A 1 46 THR 46 ? ? ? A . A 1 47 SER 47 ? ? ? A . A 1 48 GLU 48 ? ? ? A . A 1 49 HIS 49 ? ? ? A . A 1 50 TYR 50 ? ? ? A . A 1 51 PHE 51 ? ? ? A . A 1 52 GLN 52 ? ? ? A . A 1 53 ALA 53 ? ? ? A . A 1 54 GLN 54 ? ? ? A . A 1 55 LYS 55 ? ? ? A . A 1 56 PHE 56 ? ? ? A . A 1 57 LEU 57 ? ? ? A . A 1 58 ASP 58 ? ? ? A . A 1 59 GLU 59 ? ? ? A . A 1 60 LYS 60 ? ? ? A . A 1 61 TYR 61 ? ? ? A . A 1 62 ARG 62 ? ? ? A . A 1 63 GLU 63 ? ? ? A . A 1 64 GLU 64 ? ? ? A . A 1 65 ILE 65 ? ? ? A . A 1 66 ARG 66 ? ? ? A . A 1 67 ARG 67 ? ? ? A . A 1 68 VAL 68 ? ? ? A . A 1 69 SER 69 ? ? ? A . A 1 70 SER 70 ? ? ? A . A 1 71 PRO 71 ? ? ? A . A 1 72 MET 72 ? ? ? A . A 1 73 VAL 73 ? ? ? A . A 1 74 ALA 74 ? ? ? A . A 1 75 ALA 75 ? ? ? A . A 1 76 ARG 76 ? ? ? A . A 1 77 MET 77 ? ? ? A . A 1 78 GLY 78 ? ? ? A . A 1 79 ARG 79 ? ? ? A . A 1 80 ASP 80 ? ? ? A . A 1 81 ARG 81 ? ? ? A . A 1 82 SER 82 ? ? ? A . A 1 83 LYS 83 ? ? ? A . A 1 84 PRO 84 ? ? ? A . A 1 85 LEU 85 ? ? ? A . A 1 86 ARG 86 ? ? ? A . A 1 87 LYS 87 ? ? ? A . A 1 88 ASN 88 ? ? ? A . A 1 89 TRP 89 ? ? ? A . A 1 90 GLU 90 ? ? ? A . A 1 91 SER 91 ? ? ? A . A 1 92 VAL 92 ? ? ? A . A 1 93 LYS 93 ? ? ? A . A 1 94 GLU 94 ? ? ? A . A 1 95 GLN 95 ? ? ? A . A 1 96 VAL 96 ? ? ? A . A 1 97 MET 97 ? ? ? A . A 1 98 ARG 98 ? ? ? A . A 1 99 LYS 99 ? ? ? A . A 1 100 ALA 100 ? ? ? A . A 1 101 LEU 101 ? ? ? A . A 1 102 ARG 102 ? ? ? A . A 1 103 ALA 103 ? ? ? A . A 1 104 LYS 104 ? ? ? A . A 1 105 PHE 105 ? ? ? A . A 1 106 GLU 106 ? ? ? A . A 1 107 GLN 107 ? ? ? A . A 1 108 HIS 108 ? ? ? A . A 1 109 ALA 109 ? ? ? A . A 1 110 GLU 110 ? ? ? A . A 1 111 LEU 111 ? ? ? A . A 1 112 ARG 112 ? ? ? A . A 1 113 ALA 113 ? ? ? A . A 1 114 LEU 114 ? ? ? A . A 1 115 LEU 115 ? ? ? A . A 1 116 LEU 116 ? ? ? A . A 1 117 ALA 117 ? ? ? A . A 1 118 THR 118 ? ? ? A . A 1 119 ALA 119 ? ? ? A . A 1 120 PRO 120 ? ? ? A . A 1 121 ALA 121 ? ? ? A . A 1 122 LYS 122 ? ? ? A . A 1 123 LEU 123 ? ? ? A . A 1 124 VAL 124 ? ? ? A . A 1 125 GLU 125 ? ? ? A . A 1 126 HIS 126 ? ? ? A . A 1 127 THR 127 ? ? ? A . A 1 128 GLU 128 ? ? ? A . A 1 129 ASN 129 129 ASN ASN A . A 1 130 ASP 130 130 ASP ASP A . A 1 131 ALA 131 131 ALA ALA A . A 1 132 TYR 132 132 TYR TYR A . A 1 133 TRP 133 133 TRP TRP A . A 1 134 GLY 134 134 GLY GLY A . A 1 135 ASP 135 135 ASP ASP A . A 1 136 GLY 136 136 GLY GLY A . A 1 137 GLY 137 137 GLY GLY A . A 1 138 HIS 138 138 HIS HIS A . A 1 139 GLY 139 139 GLY GLY A . A 1 140 LYS 140 140 LYS LYS A . A 1 141 GLY 141 141 GLY GLY A . A 1 142 LYS 142 142 LYS LYS A . A 1 143 ASN 143 143 ASN ASN A . A 1 144 ARG 144 144 ARG ARG A . A 1 145 LEU 145 145 LEU LEU A . A 1 146 GLY 146 146 GLY GLY A . A 1 147 TYR 147 147 TYR TYR A . A 1 148 LEU 148 148 LEU LEU A . A 1 149 LEU 149 149 LEU LEU A . A 1 150 MET 150 150 MET MET A . A 1 151 GLU 151 151 GLU GLU A . A 1 152 LEU 152 152 LEU LEU A . A 1 153 ARG 153 153 ARG ARG A . A 1 154 GLU 154 154 GLU GLU A . A 1 155 GLN 155 155 GLN GLN A . A 1 156 LEU 156 156 LEU LEU A . A 1 157 ALA 157 157 ALA ALA A . A 1 158 ILE 158 ? ? ? A . A 1 159 GLU 159 ? ? ? A . A 1 160 LYS 160 ? ? ? A . # # loop_ _ma_data.id _ma_data.name _ma_data.content_type _ma_data.content_type_other_details 1 'Cholera toxin transcriptional activator {PDB ID=8b4e, label_asym_id=A, auth_asym_id=A, SMTL ID=8b4e.1.A}' 'template structure' . 2 . target . 3 'Target-template alignment by HHblits to 8b4e, label_asym_id=A' 'target-template alignment' . 4 'model 2' 'model coordinates' . 5 SMTL 'reference database' . 6 PDB 'reference database' . 7 'Template search output' other 'Results of the sequence search' # # loop_ _ma_data_group.ordinal_id _ma_data_group.group_id _ma_data_group.data_id 1 1 2 2 1 5 3 1 6 4 2 7 5 3 2 6 3 1 7 3 3 8 4 1 9 4 3 10 5 4 # # loop_ _ma_data_ref_db.data_id _ma_data_ref_db.name _ma_data_ref_db.location_url _ma_data_ref_db.version _ma_data_ref_db.release_date 5 SMTL https://swissmodel.expasy.org/templates/ . 2025-05-01 6 PDB https://www.wwpdb.org . 2025-05-01 # # loop_ _ma_target_entity.entity_id _ma_target_entity.data_id _ma_target_entity.origin 1 2 'reference database' # # loop_ _ma_target_entity_instance.asym_id _ma_target_entity_instance.entity_id _ma_target_entity_instance.details A 1 . # # loop_ _ma_template_trans_matrix.id _ma_template_trans_matrix.rot_matrix[1][1] _ma_template_trans_matrix.rot_matrix[2][1] _ma_template_trans_matrix.rot_matrix[3][1] _ma_template_trans_matrix.rot_matrix[1][2] _ma_template_trans_matrix.rot_matrix[2][2] _ma_template_trans_matrix.rot_matrix[3][2] _ma_template_trans_matrix.rot_matrix[1][3] _ma_template_trans_matrix.rot_matrix[2][3] _ma_template_trans_matrix.rot_matrix[3][3] _ma_template_trans_matrix.tr_vector[1] _ma_template_trans_matrix.tr_vector[2] _ma_template_trans_matrix.tr_vector[3] 1 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0 0 0 # # loop_ _ma_template_details.ordinal_id _ma_template_details.template_id _ma_template_details.template_origin _ma_template_details.template_entity_type _ma_template_details.template_trans_matrix_id _ma_template_details.template_data_id _ma_template_details.target_asym_id _ma_template_details.template_label_asym_id _ma_template_details.template_label_entity_id _ma_template_details.template_model_num _ma_template_details.template_auth_asym_id 1 1 'reference database' polymer 1 1 A A 1 1 A # # loop_ _ma_template_poly.template_id _ma_template_poly.seq_one_letter_code _ma_template_poly.seq_one_letter_code_can 1 ;MKFILAEKFTFDPLSNTLIDKEDSEEIIRLGSNESRILWLLAQRPNEVISRNDLHDFVWREQGFEVDDSS LTQAISTLRKMLKDSTKSPQYVKTVPKRGYQLIARVETV ; ;MKFILAEKFTFDPLSNTLIDKEDSEEIIRLGSNESRILWLLAQRPNEVISRNDLHDFVWREQGFEVDDSS LTQAISTLRKMLKDSTKSPQYVKTVPKRGYQLIARVETV ; # # loop_ _ma_template_poly_segment.id _ma_template_poly_segment.template_id _ma_template_poly_segment.residue_number_begin _ma_template_poly_segment.residue_number_end 1 1 55 83 # # loop_ _ma_template_ref_db_details.template_id _ma_template_ref_db_details.db_name _ma_template_ref_db_details.db_name_other_details _ma_template_ref_db_details.db_accession_code _ma_template_ref_db_details.db_version_date 1 PDB . 8b4e 2024-06-19 # # loop_ _ma_target_template_poly_mapping.id _ma_target_template_poly_mapping.template_segment_id _ma_target_template_poly_mapping.target_asym_id _ma_target_template_poly_mapping.target_seq_id_begin _ma_target_template_poly_mapping.target_seq_id_end 1 1 A 1 160 # # loop_ _ma_alignment_info.alignment_id _ma_alignment_info.data_id _ma_alignment_info.software_group_id _ma_alignment_info.alignment_length _ma_alignment_info.alignment_type _ma_alignment_info.alignment_mode 1 3 1 160 'target-template pairwise alignment' local # # loop_ _ma_alignment_details.ordinal_id _ma_alignment_details.alignment_id _ma_alignment_details.template_segment_id _ma_alignment_details.target_asym_id _ma_alignment_details.score_type _ma_alignment_details.score_type_other_details _ma_alignment_details.score_value _ma_alignment_details.percent_sequence_identity _ma_alignment_details.sequence_identity_denominator _ma_alignment_details.sequence_identity_denominator_other_details 1 1 1 A 'HHblits e-value' . 52.000 24.138 'Number of aligned residue pairs (not including the gaps)' . # # loop_ _ma_alignment.ordinal_id _ma_alignment.alignment_id _ma_alignment.target_template_flag _ma_alignment.sequence 1 1 1 MPVRAQRIQHVMQDTIINFYSTSDDYGDFSNFAAWPIKVDGKTWPTSEHYFQAQKFLDEKYREEIRRVSSPMVAARMGRDRSKPLRKNWESVKEQVMRKALRAKFEQHAELRALLLATAPAKLVEHTENDAYWGDGGHGKGKNRLGYLLMELREQLAIEK 2 1 2 --------------------------------------------------------------------------------------------------------------------------------HDFVWREQGFEVDDSSLTQAISTLRKMLK--- # # loop_ _ma_protocol_step.ordinal_id _ma_protocol_step.protocol_id _ma_protocol_step.step_id _ma_protocol_step.method_type _ma_protocol_step.step_name _ma_protocol_step.details _ma_protocol_step.software_group_id _ma_protocol_step.input_data_group_id _ma_protocol_step.output_data_group_id 1 1 1 'template search' 'template search' 'SWISS-MODEL template search in PDB' 2 1 2 2 1 2 'template selection' 'template selection' 'Automatic template selection by SWISS-MODEL {QSQE=0.000}' 3 2 4 3 1 3 modeling 'homology modeling' 'SWISS-MODEL auto-model mode using ProMod3 on 8b4e.1, oligomeric state (monomer) as predicted' 4 3 5 # # loop_ _ma_model_list.ordinal_id _ma_model_list.model_id _ma_model_list.model_group_id _ma_model_list.model_name _ma_model_list.model_group_name _ma_model_list.data_id _ma_model_list.model_type _ma_model_list.model_type_other_details 1 1 1 'model 2' . 4 'Homology model' . # # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_alt_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.auth_seq_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.label_entity_id _atom_site.auth_asym_id _atom_site.auth_comp_id _atom_site.B_iso_or_equiv _atom_site.pdbx_PDB_model_num ATOM 1 N N . ASN 129 129 ? A -6.066 -40.298 -22.033 1 1 A ASN 0.490 1 ATOM 2 C CA . ASN 129 129 ? A -6.362 -39.445 -20.813 1 1 A ASN 0.490 1 ATOM 3 C C . ASN 129 129 ? A -5.246 -38.480 -20.523 1 1 A ASN 0.490 1 ATOM 4 O O . ASN 129 129 ? A -5.419 -37.291 -20.698 1 1 A ASN 0.490 1 ATOM 5 C CB . ASN 129 129 ? A -6.639 -40.282 -19.530 1 1 A ASN 0.490 1 ATOM 6 C CG . ASN 129 129 ? A -7.967 -40.993 -19.742 1 1 A ASN 0.490 1 ATOM 7 O OD1 . ASN 129 129 ? A -8.734 -40.542 -20.567 1 1 A ASN 0.490 1 ATOM 8 N ND2 . ASN 129 129 ? A -8.198 -42.138 -19.060 1 1 A ASN 0.490 1 ATOM 9 N N . ASP 130 130 ? A -4.050 -38.943 -20.125 1 1 A ASP 0.490 1 ATOM 10 C CA . ASP 130 130 ? A -3.060 -38.017 -19.604 1 1 A ASP 0.490 1 ATOM 11 C C . ASP 130 130 ? A -2.587 -36.928 -20.565 1 1 A ASP 0.490 1 ATOM 12 O O . ASP 130 130 ? A -2.579 -35.756 -20.220 1 1 A ASP 0.490 1 ATOM 13 C CB . ASP 130 130 ? A -1.923 -38.862 -19.004 1 1 A ASP 0.490 1 ATOM 14 C CG . ASP 130 130 ? A -2.642 -39.790 -18.035 1 1 A ASP 0.490 1 ATOM 15 O OD1 . ASP 130 130 ? A -3.526 -39.298 -17.291 1 1 A ASP 0.490 1 ATOM 16 O OD2 . ASP 130 130 ? A -2.492 -41.020 -18.231 1 1 A ASP 0.490 1 ATOM 17 N N . ALA 131 131 ? A -2.337 -37.301 -21.843 1 1 A ALA 0.250 1 ATOM 18 C CA . ALA 131 131 ? A -1.895 -36.396 -22.890 1 1 A ALA 0.250 1 ATOM 19 C C . ALA 131 131 ? A -2.936 -35.370 -23.361 1 1 A ALA 0.250 1 ATOM 20 O O . ALA 131 131 ? A -2.600 -34.391 -24.007 1 1 A ALA 0.250 1 ATOM 21 C CB . ALA 131 131 ? A -1.492 -37.218 -24.143 1 1 A ALA 0.250 1 ATOM 22 N N . TYR 132 132 ? A -4.241 -35.596 -23.068 1 1 A TYR 0.240 1 ATOM 23 C CA . TYR 132 132 ? A -5.307 -34.706 -23.505 1 1 A TYR 0.240 1 ATOM 24 C C . TYR 132 132 ? A -5.778 -33.794 -22.380 1 1 A TYR 0.240 1 ATOM 25 O O . TYR 132 132 ? A -6.418 -32.782 -22.642 1 1 A TYR 0.240 1 ATOM 26 C CB . TYR 132 132 ? A -6.561 -35.512 -23.954 1 1 A TYR 0.240 1 ATOM 27 C CG . TYR 132 132 ? A -6.266 -36.342 -25.162 1 1 A TYR 0.240 1 ATOM 28 C CD1 . TYR 132 132 ? A -6.103 -35.722 -26.406 1 1 A TYR 0.240 1 ATOM 29 C CD2 . TYR 132 132 ? A -6.166 -37.740 -25.074 1 1 A TYR 0.240 1 ATOM 30 C CE1 . TYR 132 132 ? A -5.843 -36.487 -27.549 1 1 A TYR 0.240 1 ATOM 31 C CE2 . TYR 132 132 ? A -5.895 -38.508 -26.218 1 1 A TYR 0.240 1 ATOM 32 C CZ . TYR 132 132 ? A -5.737 -37.876 -27.458 1 1 A TYR 0.240 1 ATOM 33 O OH . TYR 132 132 ? A -5.493 -38.614 -28.633 1 1 A TYR 0.240 1 ATOM 34 N N . TRP 133 133 ? A -5.482 -34.126 -21.098 1 1 A TRP 0.170 1 ATOM 35 C CA . TRP 133 133 ? A -5.986 -33.363 -19.964 1 1 A TRP 0.170 1 ATOM 36 C C . TRP 133 133 ? A -4.908 -32.784 -19.047 1 1 A TRP 0.170 1 ATOM 37 O O . TRP 133 133 ? A -4.689 -31.579 -18.991 1 1 A TRP 0.170 1 ATOM 38 C CB . TRP 133 133 ? A -7.007 -34.201 -19.121 1 1 A TRP 0.170 1 ATOM 39 C CG . TRP 133 133 ? A -8.445 -34.200 -19.657 1 1 A TRP 0.170 1 ATOM 40 C CD1 . TRP 133 133 ? A -9.405 -33.251 -19.453 1 1 A TRP 0.170 1 ATOM 41 C CD2 . TRP 133 133 ? A -9.055 -35.154 -20.566 1 1 A TRP 0.170 1 ATOM 42 N NE1 . TRP 133 133 ? A -10.560 -33.531 -20.181 1 1 A TRP 0.170 1 ATOM 43 C CE2 . TRP 133 133 ? A -10.334 -34.718 -20.862 1 1 A TRP 0.170 1 ATOM 44 C CE3 . TRP 133 133 ? A -8.535 -36.295 -21.157 1 1 A TRP 0.170 1 ATOM 45 C CZ2 . TRP 133 133 ? A -11.154 -35.416 -21.769 1 1 A TRP 0.170 1 ATOM 46 C CZ3 . TRP 133 133 ? A -9.352 -37.032 -22.033 1 1 A TRP 0.170 1 ATOM 47 C CH2 . TRP 133 133 ? A -10.647 -36.606 -22.328 1 1 A TRP 0.170 1 ATOM 48 N N . GLY 134 134 ? A -4.286 -33.631 -18.207 1 1 A GLY 0.250 1 ATOM 49 C CA . GLY 134 134 ? A -3.666 -33.206 -16.954 1 1 A GLY 0.250 1 ATOM 50 C C . GLY 134 134 ? A -2.335 -32.506 -16.872 1 1 A GLY 0.250 1 ATOM 51 O O . GLY 134 134 ? A -1.870 -32.250 -15.769 1 1 A GLY 0.250 1 ATOM 52 N N . ASP 135 135 ? A -1.747 -32.089 -18.006 1 1 A ASP 0.400 1 ATOM 53 C CA . ASP 135 135 ? A -0.691 -31.087 -18.079 1 1 A ASP 0.400 1 ATOM 54 C C . ASP 135 135 ? A -1.197 -29.740 -17.538 1 1 A ASP 0.400 1 ATOM 55 O O . ASP 135 135 ? A -0.534 -29.038 -16.795 1 1 A ASP 0.400 1 ATOM 56 C CB . ASP 135 135 ? A -0.164 -30.954 -19.539 1 1 A ASP 0.400 1 ATOM 57 C CG . ASP 135 135 ? A 0.570 -32.212 -19.991 1 1 A ASP 0.400 1 ATOM 58 O OD1 . ASP 135 135 ? A 0.848 -33.091 -19.139 1 1 A ASP 0.400 1 ATOM 59 O OD2 . ASP 135 135 ? A 0.887 -32.276 -21.205 1 1 A ASP 0.400 1 ATOM 60 N N . GLY 136 136 ? A -2.477 -29.398 -17.842 1 1 A GLY 0.320 1 ATOM 61 C CA . GLY 136 136 ? A -3.184 -28.305 -17.169 1 1 A GLY 0.320 1 ATOM 62 C C . GLY 136 136 ? A -4.036 -28.772 -16.012 1 1 A GLY 0.320 1 ATOM 63 O O . GLY 136 136 ? A -5.081 -28.182 -15.738 1 1 A GLY 0.320 1 ATOM 64 N N . GLY 137 137 ? A -3.629 -29.850 -15.307 1 1 A GLY 0.310 1 ATOM 65 C CA . GLY 137 137 ? A -4.135 -30.328 -14.014 1 1 A GLY 0.310 1 ATOM 66 C C . GLY 137 137 ? A -5.344 -31.225 -13.995 1 1 A GLY 0.310 1 ATOM 67 O O . GLY 137 137 ? A -5.637 -31.879 -13.003 1 1 A GLY 0.310 1 ATOM 68 N N . HIS 138 138 ? A -6.125 -31.217 -15.080 1 1 A HIS 0.310 1 ATOM 69 C CA . HIS 138 138 ? A -7.505 -31.666 -15.061 1 1 A HIS 0.310 1 ATOM 70 C C . HIS 138 138 ? A -7.770 -33.150 -14.810 1 1 A HIS 0.310 1 ATOM 71 O O . HIS 138 138 ? A -7.801 -33.952 -15.738 1 1 A HIS 0.310 1 ATOM 72 C CB . HIS 138 138 ? A -8.228 -31.239 -16.358 1 1 A HIS 0.310 1 ATOM 73 C CG . HIS 138 138 ? A -8.341 -29.762 -16.490 1 1 A HIS 0.310 1 ATOM 74 N ND1 . HIS 138 138 ? A -8.929 -29.063 -15.450 1 1 A HIS 0.310 1 ATOM 75 C CD2 . HIS 138 138 ? A -7.872 -28.912 -17.429 1 1 A HIS 0.310 1 ATOM 76 C CE1 . HIS 138 138 ? A -8.772 -27.798 -15.770 1 1 A HIS 0.310 1 ATOM 77 N NE2 . HIS 138 138 ? A -8.152 -27.641 -16.970 1 1 A HIS 0.310 1 ATOM 78 N N . GLY 139 139 ? A -8.071 -33.536 -13.546 1 1 A GLY 0.300 1 ATOM 79 C CA . GLY 139 139 ? A -8.457 -34.893 -13.163 1 1 A GLY 0.300 1 ATOM 80 C C . GLY 139 139 ? A -9.920 -35.145 -13.371 1 1 A GLY 0.300 1 ATOM 81 O O . GLY 139 139 ? A -10.702 -35.216 -12.429 1 1 A GLY 0.300 1 ATOM 82 N N . LYS 140 140 ? A -10.335 -35.261 -14.640 1 1 A LYS 0.300 1 ATOM 83 C CA . LYS 140 140 ? A -11.700 -35.567 -15.017 1 1 A LYS 0.300 1 ATOM 84 C C . LYS 140 140 ? A -12.029 -37.041 -14.882 1 1 A LYS 0.300 1 ATOM 85 O O . LYS 140 140 ? A -11.171 -37.890 -14.673 1 1 A LYS 0.300 1 ATOM 86 C CB . LYS 140 140 ? A -11.998 -35.083 -16.460 1 1 A LYS 0.300 1 ATOM 87 C CG . LYS 140 140 ? A -11.695 -33.582 -16.663 1 1 A LYS 0.300 1 ATOM 88 C CD . LYS 140 140 ? A -12.610 -32.629 -15.850 1 1 A LYS 0.300 1 ATOM 89 C CE . LYS 140 140 ? A -12.367 -31.118 -16.071 1 1 A LYS 0.300 1 ATOM 90 N NZ . LYS 140 140 ? A -13.237 -30.282 -15.201 1 1 A LYS 0.300 1 ATOM 91 N N . GLY 141 141 ? A -13.333 -37.389 -14.980 1 1 A GLY 0.350 1 ATOM 92 C CA . GLY 141 141 ? A -13.727 -38.788 -14.940 1 1 A GLY 0.350 1 ATOM 93 C C . GLY 141 141 ? A -13.293 -39.542 -16.172 1 1 A GLY 0.350 1 ATOM 94 O O . GLY 141 141 ? A -13.010 -38.949 -17.215 1 1 A GLY 0.350 1 ATOM 95 N N . LYS 142 142 ? A -13.307 -40.887 -16.122 1 1 A LYS 0.330 1 ATOM 96 C CA . LYS 142 142 ? A -12.888 -41.722 -17.236 1 1 A LYS 0.330 1 ATOM 97 C C . LYS 142 142 ? A -13.858 -41.702 -18.417 1 1 A LYS 0.330 1 ATOM 98 O O . LYS 142 142 ? A -13.475 -41.898 -19.563 1 1 A LYS 0.330 1 ATOM 99 C CB . LYS 142 142 ? A -12.709 -43.187 -16.768 1 1 A LYS 0.330 1 ATOM 100 C CG . LYS 142 142 ? A -11.537 -43.358 -15.788 1 1 A LYS 0.330 1 ATOM 101 C CD . LYS 142 142 ? A -11.342 -44.824 -15.367 1 1 A LYS 0.330 1 ATOM 102 C CE . LYS 142 142 ? A -10.164 -45.023 -14.403 1 1 A LYS 0.330 1 ATOM 103 N NZ . LYS 142 142 ? A -10.067 -46.444 -13.997 1 1 A LYS 0.330 1 ATOM 104 N N . ASN 143 143 ? A -15.154 -41.423 -18.142 1 1 A ASN 0.430 1 ATOM 105 C CA . ASN 143 143 ? A -16.233 -41.443 -19.124 1 1 A ASN 0.430 1 ATOM 106 C C . ASN 143 143 ? A -16.145 -40.361 -20.189 1 1 A ASN 0.430 1 ATOM 107 O O . ASN 143 143 ? A -16.667 -40.509 -21.288 1 1 A ASN 0.430 1 ATOM 108 C CB . ASN 143 143 ? A -17.619 -41.255 -18.449 1 1 A ASN 0.430 1 ATOM 109 C CG . ASN 143 143 ? A -17.957 -42.493 -17.629 1 1 A ASN 0.430 1 ATOM 110 O OD1 . ASN 143 143 ? A -17.418 -43.565 -17.823 1 1 A ASN 0.430 1 ATOM 111 N ND2 . ASN 143 143 ? A -18.912 -42.331 -16.678 1 1 A ASN 0.430 1 ATOM 112 N N . ARG 144 144 ? A -15.477 -39.229 -19.874 1 1 A ARG 0.330 1 ATOM 113 C CA . ARG 144 144 ? A -15.319 -38.101 -20.770 1 1 A ARG 0.330 1 ATOM 114 C C . ARG 144 144 ? A -14.539 -38.443 -22.037 1 1 A ARG 0.330 1 ATOM 115 O O . ARG 144 144 ? A -14.836 -37.951 -23.120 1 1 A ARG 0.330 1 ATOM 116 C CB . ARG 144 144 ? A -14.620 -36.933 -20.042 1 1 A ARG 0.330 1 ATOM 117 C CG . ARG 144 144 ? A -14.681 -35.609 -20.829 1 1 A ARG 0.330 1 ATOM 118 C CD . ARG 144 144 ? A -14.041 -34.461 -20.057 1 1 A ARG 0.330 1 ATOM 119 N NE . ARG 144 144 ? A -14.085 -33.243 -20.954 1 1 A ARG 0.330 1 ATOM 120 C CZ . ARG 144 144 ? A -13.599 -32.044 -20.612 1 1 A ARG 0.330 1 ATOM 121 N NH1 . ARG 144 144 ? A -13.021 -31.885 -19.430 1 1 A ARG 0.330 1 ATOM 122 N NH2 . ARG 144 144 ? A -13.601 -31.003 -21.439 1 1 A ARG 0.330 1 ATOM 123 N N . LEU 145 145 ? A -13.523 -39.331 -21.903 1 1 A LEU 0.460 1 ATOM 124 C CA . LEU 145 145 ? A -12.800 -39.922 -23.014 1 1 A LEU 0.460 1 ATOM 125 C C . LEU 145 145 ? A -13.703 -40.740 -23.938 1 1 A LEU 0.460 1 ATOM 126 O O . LEU 145 145 ? A -13.665 -40.590 -25.155 1 1 A LEU 0.460 1 ATOM 127 C CB . LEU 145 145 ? A -11.662 -40.841 -22.490 1 1 A LEU 0.460 1 ATOM 128 C CG . LEU 145 145 ? A -10.914 -41.617 -23.607 1 1 A LEU 0.460 1 ATOM 129 C CD1 . LEU 145 145 ? A -10.374 -40.690 -24.714 1 1 A LEU 0.460 1 ATOM 130 C CD2 . LEU 145 145 ? A -9.771 -42.471 -23.042 1 1 A LEU 0.460 1 ATOM 131 N N . GLY 146 146 ? A -14.582 -41.602 -23.371 1 1 A GLY 0.600 1 ATOM 132 C CA . GLY 146 146 ? A -15.512 -42.419 -24.151 1 1 A GLY 0.600 1 ATOM 133 C C . GLY 146 146 ? A -16.532 -41.623 -24.940 1 1 A GLY 0.600 1 ATOM 134 O O . GLY 146 146 ? A -16.854 -41.968 -26.068 1 1 A GLY 0.600 1 ATOM 135 N N . TYR 147 147 ? A -17.018 -40.496 -24.372 1 1 A TYR 0.690 1 ATOM 136 C CA . TYR 147 147 ? A -17.827 -39.503 -25.070 1 1 A TYR 0.690 1 ATOM 137 C C . TYR 147 147 ? A -17.078 -38.776 -26.196 1 1 A TYR 0.690 1 ATOM 138 O O . TYR 147 147 ? A -17.592 -38.618 -27.297 1 1 A TYR 0.690 1 ATOM 139 C CB . TYR 147 147 ? A -18.354 -38.441 -24.053 1 1 A TYR 0.690 1 ATOM 140 C CG . TYR 147 147 ? A -19.172 -37.368 -24.741 1 1 A TYR 0.690 1 ATOM 141 C CD1 . TYR 147 147 ? A -18.595 -36.131 -25.092 1 1 A TYR 0.690 1 ATOM 142 C CD2 . TYR 147 147 ? A -20.481 -37.642 -25.163 1 1 A TYR 0.690 1 ATOM 143 C CE1 . TYR 147 147 ? A -19.347 -35.159 -25.769 1 1 A TYR 0.690 1 ATOM 144 C CE2 . TYR 147 147 ? A -21.231 -36.672 -25.840 1 1 A TYR 0.690 1 ATOM 145 C CZ . TYR 147 147 ? A -20.682 -35.414 -26.091 1 1 A TYR 0.690 1 ATOM 146 O OH . TYR 147 147 ? A -21.490 -34.401 -26.640 1 1 A TYR 0.690 1 ATOM 147 N N . LEU 148 148 ? A -15.832 -38.316 -25.943 1 1 A LEU 0.790 1 ATOM 148 C CA . LEU 148 148 ? A -14.994 -37.654 -26.930 1 1 A LEU 0.790 1 ATOM 149 C C . LEU 148 148 ? A -14.647 -38.548 -28.119 1 1 A LEU 0.790 1 ATOM 150 O O . LEU 148 148 ? A -14.579 -38.116 -29.263 1 1 A LEU 0.790 1 ATOM 151 C CB . LEU 148 148 ? A -13.682 -37.125 -26.294 1 1 A LEU 0.790 1 ATOM 152 C CG . LEU 148 148 ? A -12.767 -36.347 -27.276 1 1 A LEU 0.790 1 ATOM 153 C CD1 . LEU 148 148 ? A -13.438 -35.075 -27.840 1 1 A LEU 0.790 1 ATOM 154 C CD2 . LEU 148 148 ? A -11.412 -36.030 -26.623 1 1 A LEU 0.790 1 ATOM 155 N N . LEU 149 149 ? A -14.429 -39.851 -27.869 1 1 A LEU 0.830 1 ATOM 156 C CA . LEU 149 149 ? A -14.280 -40.838 -28.916 1 1 A LEU 0.830 1 ATOM 157 C C . LEU 149 149 ? A -15.512 -41.034 -29.805 1 1 A LEU 0.830 1 ATOM 158 O O . LEU 149 149 ? A -15.399 -41.186 -31.024 1 1 A LEU 0.830 1 ATOM 159 C CB . LEU 149 149 ? A -13.999 -42.215 -28.281 1 1 A LEU 0.830 1 ATOM 160 C CG . LEU 149 149 ? A -13.884 -43.359 -29.313 1 1 A LEU 0.830 1 ATOM 161 C CD1 . LEU 149 149 ? A -12.710 -43.120 -30.284 1 1 A LEU 0.830 1 ATOM 162 C CD2 . LEU 149 149 ? A -13.800 -44.705 -28.587 1 1 A LEU 0.830 1 ATOM 163 N N . MET 150 150 ? A -16.728 -41.091 -29.206 1 1 A MET 0.900 1 ATOM 164 C CA . MET 150 150 ? A -17.988 -41.157 -29.930 1 1 A MET 0.900 1 ATOM 165 C C . MET 150 150 ? A -18.202 -39.916 -30.763 1 1 A MET 0.900 1 ATOM 166 O O . MET 150 150 ? A -18.395 -40.043 -31.961 1 1 A MET 0.900 1 ATOM 167 C CB . MET 150 150 ? A -19.206 -41.364 -28.997 1 1 A MET 0.900 1 ATOM 168 C CG . MET 150 150 ? A -19.241 -42.752 -28.330 1 1 A MET 0.900 1 ATOM 169 S SD . MET 150 150 ? A -20.600 -42.963 -27.134 1 1 A MET 0.900 1 ATOM 170 C CE . MET 150 150 ? A -21.971 -42.913 -28.332 1 1 A MET 0.900 1 ATOM 171 N N . GLU 151 151 ? A -17.996 -38.715 -30.157 1 1 A GLU 0.880 1 ATOM 172 C CA . GLU 151 151 ? A -18.058 -37.406 -30.800 1 1 A GLU 0.880 1 ATOM 173 C C . GLU 151 151 ? A -17.134 -37.359 -32.005 1 1 A GLU 0.880 1 ATOM 174 O O . GLU 151 151 ? A -17.482 -36.906 -33.092 1 1 A GLU 0.880 1 ATOM 175 C CB . GLU 151 151 ? A -17.570 -36.305 -29.803 1 1 A GLU 0.880 1 ATOM 176 C CG . GLU 151 151 ? A -17.333 -34.881 -30.397 1 1 A GLU 0.880 1 ATOM 177 C CD . GLU 151 151 ? A -18.571 -34.206 -30.975 1 1 A GLU 0.880 1 ATOM 178 O OE1 . GLU 151 151 ? A -18.359 -33.381 -31.907 1 1 A GLU 0.880 1 ATOM 179 O OE2 . GLU 151 151 ? A -19.690 -34.449 -30.472 1 1 A GLU 0.880 1 ATOM 180 N N . LEU 152 152 ? A -15.900 -37.892 -31.864 1 1 A LEU 0.920 1 ATOM 181 C CA . LEU 152 152 ? A -14.952 -37.924 -32.961 1 1 A LEU 0.920 1 ATOM 182 C C . LEU 152 152 ? A -15.371 -38.769 -34.159 1 1 A LEU 0.920 1 ATOM 183 O O . LEU 152 152 ? A -15.236 -38.363 -35.308 1 1 A LEU 0.920 1 ATOM 184 C CB . LEU 152 152 ? A -13.544 -38.353 -32.497 1 1 A LEU 0.920 1 ATOM 185 C CG . LEU 152 152 ? A -12.410 -38.055 -33.518 1 1 A LEU 0.920 1 ATOM 186 C CD1 . LEU 152 152 ? A -12.509 -36.672 -34.209 1 1 A LEU 0.920 1 ATOM 187 C CD2 . LEU 152 152 ? A -11.049 -38.180 -32.812 1 1 A LEU 0.920 1 ATOM 188 N N . ARG 153 153 ? A -15.941 -39.967 -33.914 1 1 A ARG 0.790 1 ATOM 189 C CA . ARG 153 153 ? A -16.535 -40.761 -34.972 1 1 A ARG 0.790 1 ATOM 190 C C . ARG 153 153 ? A -17.849 -40.194 -35.492 1 1 A ARG 0.790 1 ATOM 191 O O . ARG 153 153 ? A -18.217 -40.450 -36.621 1 1 A ARG 0.790 1 ATOM 192 C CB . ARG 153 153 ? A -16.792 -42.217 -34.541 1 1 A ARG 0.790 1 ATOM 193 C CG . ARG 153 153 ? A -15.524 -42.991 -34.147 1 1 A ARG 0.790 1 ATOM 194 C CD . ARG 153 153 ? A -15.647 -44.461 -34.564 1 1 A ARG 0.790 1 ATOM 195 N NE . ARG 153 153 ? A -14.704 -45.290 -33.732 1 1 A ARG 0.790 1 ATOM 196 C CZ . ARG 153 153 ? A -14.979 -45.705 -32.487 1 1 A ARG 0.790 1 ATOM 197 N NH1 . ARG 153 153 ? A -16.068 -45.294 -31.847 1 1 A ARG 0.790 1 ATOM 198 N NH2 . ARG 153 153 ? A -14.156 -46.551 -31.872 1 1 A ARG 0.790 1 ATOM 199 N N . GLU 154 154 ? A -18.595 -39.391 -34.706 1 1 A GLU 0.870 1 ATOM 200 C CA . GLU 154 154 ? A -19.738 -38.649 -35.211 1 1 A GLU 0.870 1 ATOM 201 C C . GLU 154 154 ? A -19.356 -37.524 -36.167 1 1 A GLU 0.870 1 ATOM 202 O O . GLU 154 154 ? A -20.016 -37.311 -37.179 1 1 A GLU 0.870 1 ATOM 203 C CB . GLU 154 154 ? A -20.629 -38.138 -34.059 1 1 A GLU 0.870 1 ATOM 204 C CG . GLU 154 154 ? A -21.336 -39.314 -33.330 1 1 A GLU 0.870 1 ATOM 205 C CD . GLU 154 154 ? A -22.217 -38.906 -32.153 1 1 A GLU 0.870 1 ATOM 206 O OE1 . GLU 154 154 ? A -22.374 -37.691 -31.893 1 1 A GLU 0.870 1 ATOM 207 O OE2 . GLU 154 154 ? A -22.762 -39.847 -31.515 1 1 A GLU 0.870 1 ATOM 208 N N . GLN 155 155 ? A -18.245 -36.797 -35.903 1 1 A GLN 0.880 1 ATOM 209 C CA . GLN 155 155 ? A -17.672 -35.855 -36.855 1 1 A GLN 0.880 1 ATOM 210 C C . GLN 155 155 ? A -17.136 -36.500 -38.110 1 1 A GLN 0.880 1 ATOM 211 O O . GLN 155 155 ? A -17.309 -35.978 -39.204 1 1 A GLN 0.880 1 ATOM 212 C CB . GLN 155 155 ? A -16.486 -35.075 -36.247 1 1 A GLN 0.880 1 ATOM 213 C CG . GLN 155 155 ? A -16.964 -34.103 -35.158 1 1 A GLN 0.880 1 ATOM 214 C CD . GLN 155 155 ? A -15.791 -33.379 -34.511 1 1 A GLN 0.880 1 ATOM 215 O OE1 . GLN 155 155 ? A -14.748 -33.135 -35.112 1 1 A GLN 0.880 1 ATOM 216 N NE2 . GLN 155 155 ? A -15.975 -32.999 -33.226 1 1 A GLN 0.880 1 ATOM 217 N N . LEU 156 156 ? A -16.428 -37.638 -37.961 1 1 A LEU 0.770 1 ATOM 218 C CA . LEU 156 156 ? A -15.853 -38.356 -39.084 1 1 A LEU 0.770 1 ATOM 219 C C . LEU 156 156 ? A -16.859 -39.096 -39.954 1 1 A LEU 0.770 1 ATOM 220 O O . LEU 156 156 ? A -16.629 -39.264 -41.146 1 1 A LEU 0.770 1 ATOM 221 C CB . LEU 156 156 ? A -14.763 -39.365 -38.612 1 1 A LEU 0.770 1 ATOM 222 C CG . LEU 156 156 ? A -13.311 -38.961 -38.971 1 1 A LEU 0.770 1 ATOM 223 C CD1 . LEU 156 156 ? A -12.328 -40.037 -38.463 1 1 A LEU 0.770 1 ATOM 224 C CD2 . LEU 156 156 ? A -13.107 -38.744 -40.491 1 1 A LEU 0.770 1 ATOM 225 N N . ALA 157 157 ? A -17.972 -39.519 -39.321 1 1 A ALA 0.770 1 ATOM 226 C CA . ALA 157 157 ? A -18.920 -40.494 -39.795 1 1 A ALA 0.770 1 ATOM 227 C C . ALA 157 157 ? A -18.406 -41.960 -39.948 1 1 A ALA 0.770 1 ATOM 228 O O . ALA 157 157 ? A -17.261 -42.279 -39.524 1 1 A ALA 0.770 1 ATOM 229 C CB . ALA 157 157 ? A -19.708 -39.933 -40.999 1 1 A ALA 0.770 1 ATOM 230 O OXT . ALA 157 157 ? A -19.224 -42.804 -40.411 1 1 A ALA 0.770 1 # # loop_ _atom_type.symbol C N O S # # loop_ _ma_qa_metric.id _ma_qa_metric.name _ma_qa_metric.description _ma_qa_metric.type _ma_qa_metric.mode _ma_qa_metric.type_other_details _ma_qa_metric.software_group_id 1 QMEANDisCo 'Predicted accuracy according to all-atom lDDT in [0,1].' 'pLDDT all-atom in [0,1]' local . 5 2 QMEANDisCo 'Predicted accuracy according to all-atom lDDT in [0,1].' 'pLDDT all-atom in [0,1]' global . 5 3 GMQE 'Global Model Quality Estimate of the model accuracy, calculated by SWISS-MODEL.' 'normalized score' global . 6 # # loop_ _ma_qa_metric_global.ordinal_id _ma_qa_metric_global.model_id _ma_qa_metric_global.metric_id _ma_qa_metric_global.metric_value 1 1 2 0.532 2 1 3 0.048 # # loop_ _ma_qa_metric_local.ordinal_id _ma_qa_metric_local.model_id _ma_qa_metric_local.label_asym_id _ma_qa_metric_local.label_seq_id _ma_qa_metric_local.label_comp_id _ma_qa_metric_local.metric_id _ma_qa_metric_local.metric_value 1 1 A 129 ASN 1 0.490 2 1 A 130 ASP 1 0.490 3 1 A 131 ALA 1 0.250 4 1 A 132 TYR 1 0.240 5 1 A 133 TRP 1 0.170 6 1 A 134 GLY 1 0.250 7 1 A 135 ASP 1 0.400 8 1 A 136 GLY 1 0.320 9 1 A 137 GLY 1 0.310 10 1 A 138 HIS 1 0.310 11 1 A 139 GLY 1 0.300 12 1 A 140 LYS 1 0.300 13 1 A 141 GLY 1 0.350 14 1 A 142 LYS 1 0.330 15 1 A 143 ASN 1 0.430 16 1 A 144 ARG 1 0.330 17 1 A 145 LEU 1 0.460 18 1 A 146 GLY 1 0.600 19 1 A 147 TYR 1 0.690 20 1 A 148 LEU 1 0.790 21 1 A 149 LEU 1 0.830 22 1 A 150 MET 1 0.900 23 1 A 151 GLU 1 0.880 24 1 A 152 LEU 1 0.920 25 1 A 153 ARG 1 0.790 26 1 A 154 GLU 1 0.870 27 1 A 155 GLN 1 0.880 28 1 A 156 LEU 1 0.770 29 1 A 157 ALA 1 0.770 # # loop_ _pdbx_data_usage.id _pdbx_data_usage.type _pdbx_data_usage.details _pdbx_data_usage.url 1 license ;This SWISS-MODEL protein model is copyright. 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