data_SMR-cdd243c04b8a4332039fb8da30228bbd_2
_entry.id SMR-cdd243c04b8a4332039fb8da30228bbd_2
_struct.entry_id SMR-cdd243c04b8a4332039fb8da30228bbd_2
_struct.pdbx_model_details
;This model was generated unsupervised by the SWISS-MODEL homology-modelling pipeline for the SWISS-MODEL Repository, a database of annotated 3D protein structure models. The modelled monomer covers following UniProtKB entries:

  - P86640/ DMS8_PHAJA, Dermaseptin-J8

Estimated model accuracy of this model is 0.549, calculated by SWISS-MODEL as Global Model Quality Estimate (GMQE).
;
_struct.pdbx_structure_determination_methodology computational
_struct.title 'Model for UniProtKB entries P86640'
_audit_conform.dict_location https://raw.githubusercontent.com/ihmwg/ModelCIF/d18ba38/base/mmcif_ma-core.dic
_audit_conform.dict_name mmcif_ma.dic
_audit_conform.dict_version 1.4.6
#
loop_
_citation.id
_citation.title
_citation.journal_abbrev
_citation.journal_volume
_citation.page_first
_citation.page_last
_citation.year
_citation.pdbx_database_id_PubMed
_citation.pdbx_database_id_DOI
primary 'The SWISS-MODEL Repository - new features and functionality'
'Nucleic Acids Res.' 45 D313 D319 2017 27899672 10.1093/nar/gkw1132
2 'SWISS-MODEL: homology modelling of protein structures and complexes'
'Nucleic Acids Res.' 46 W296 W303 2018 29788355 10.1093/nar/gky427
3 'ProMod3 - A versatile homology modelling toolbox' 'PLoS Comput. Biol.' 17(1)
1 18 2021 33507980 10.1371/journal.pcbi.1008667
4 'QMEANDisCo - distance constraints applied on model quality estimation'
Bioinformatics 36 1765 1771 2020 31697312 10.1093/bioinformatics/btz828
5
'OpenStructure: an integrated software framework for computational structural biology'
'Acta Crystallogr., Sect. D: Biol. Crystallogr.' 69 701 709 2013 23633579
10.1107/S0907444913007051
6 'BLAST+: architecture and applications' 'BMC Bioinf.' 10 421 . 2009 20003500
10.1186/1471-2105-10-421
7 'HH-suite3 for fast remote homology detection and deep protein annotation'
'BMC Bioinf.' 20 473 . 2019 31521110 10.1186/s12859-019-3019-7
#
#
loop_
_citation_author.citation_id
_citation_author.name
_citation_author.ordinal
primary 'Bienert, S.' 1
primary 'Waterhouse, A.' 2
primary 'de Beer, T.A.P.' 3
primary 'Tauriello, G.' 4
primary 'Studer, G.' 5
primary 'Bordoli, L.' 6
primary 'Schwede, T.' 7
2 'Waterhouse, A.' 8
2 'Bertoni, M.' 9
2 'Bienert, S.' 10
2 'Studer, G.' 11
2 'Tauriello, G.' 12
2 'Gumienny, R.' 13
2 'Heer, F.T.' 14
2 'de Beer, T.A.P.' 15
2 'Rempfer, C.' 16
2 'Bordoli, L.' 17
2 'Lepore, R.' 18
2 'Schwede, T.' 19
3 'Studer, G.' 20
3 'Tauriello, G.' 21
3 'Bienert, S.' 22
3 'Biasini, M.' 23
3 'Johner, N.' 24
3 'Schwede, T.' 25
4 'Studer, G.' 26
4 'Rempfer, C.' 27
4 'Waterhouse, A.M.' 28
4 'Gumienny, R.' 29
4 'Haas, J.' 30
4 'Schwede, T.' 31
5 'Biasini, M.' 32
5 'Schmidt, T.' 33
5 'Bienert, S.' 34
5 'Mariani, V.' 35
5 'Studer, G.' 36
5 'Haas, J.' 37
5 'Johner, N.' 38
5 'Schenk, A.D.' 39
5 'Philippsen, A.' 40
5 'Schwede, T.' 41
6 'Camacho, C.' 42
6 'Coulouris, G.' 43
6 'Avagyan, V.' 44
6 'Ma, N.' 45
6 'Papadopoulos, J.' 46
6 'Bealer, K.' 47
6 'Madden, T.L.' 48
7 'Steinegger, M.' 49
7 'Meier, M.' 50
7 'Mirdita, M.' 51
7 'Vohringer, H.' 52
7 'Haunsberger, S.J.' 53
7 'Soding, J.' 54
#
#
loop_
_software.pdbx_ordinal
_software.name
_software.classification
_software.description
_software.version
_software.type
_software.location
_software.citation_id
1 SWISS-MODEL 'model building' 'Homology modelling web service'
c59120ae913c122b22dc2ebae5eb59cce9b022ff package https://swissmodel.expasy.org 2
2 ProMod3 'model building' 'Modular homology modelling engine' 3.4.1 library
https://git.scicore.unibas.ch/schwede/ProMod3 3
3 QMEAN 'model building' 'QMEAN - Qualitative Model Energy ANalysis' 4.3.1
library https://git.scicore.unibas.ch/schwede/QMEAN 4
4 OpenStructure 'data processing'
'Open-Source Computational Structural Biology Framework' 2.8.0 package
https://openstructure.org/ 5
5 BLAST 'data collection' . 2.14.1 package https://blast.ncbi.nlm.nih.gov 6
6 HH-suite 'data collection' 'HH-suite3 for sensitive sequence searching' 3.2.0
package https://github.com/soedinglab/hh-suite 7
#
#
loop_
_ma_software_group.ordinal_id
_ma_software_group.group_id
_ma_software_group.software_id
_ma_software_group.parameter_group_id
1 1 6 .
2 2 1 .
3 2 4 .
4 2 5 .
5 2 6 .
6 3 1 .
7 3 4 .
8 4 1 .
9 4 2 .
10 4 4 .
11 5 3 .
12 6 1 .
13 6 3 .
14 6 4 .
#
#
loop_
_audit_author.name
_audit_author.pdbx_ordinal
'Bienert, S.' 1
'Waterhouse, A.' 2
'de Beer, T.A.P.' 3
'Tauriello, G.' 4
'Studer, G.' 5
'Bordoli, L.' 6
'Schwede, T.' 7
#
#
loop_
_chem_comp.id
_chem_comp.type
_chem_comp.name
_chem_comp.formula
_chem_comp.formula_weight
_chem_comp.ma_provenance
ALA 'L-peptide linking' ALANINE 'C3 H7 N O2' 89.094 'CCD Core'
ARG 'L-peptide linking' ARGININE 'C6 H15 N4 O2 1' 175.212 'CCD Core'
ASN 'L-peptide linking' ASPARAGINE 'C4 H8 N2 O3' 132.119 'CCD Core'
ASP 'L-peptide linking' 'ASPARTIC ACID' 'C4 H7 N O4' 133.103 'CCD Core'
CYS 'L-peptide linking' CYSTEINE 'C3 H7 N O2 S' 121.154 'CCD Core'
GLN 'L-peptide linking' GLUTAMINE 'C5 H10 N2 O3' 146.146 'CCD Core'
GLU 'L-peptide linking' 'GLUTAMIC ACID' 'C5 H9 N O4' 147.130 'CCD Core'
GLY 'peptide linking' GLYCINE 'C2 H5 N O2' 75.067 'CCD Core'
HIS 'L-peptide linking' HISTIDINE 'C6 H10 N3 O2 1' 156.165 'CCD Core'
ILE 'L-peptide linking' ISOLEUCINE 'C6 H13 N O2' 131.175 'CCD Core'
LEU 'L-peptide linking' LEUCINE 'C6 H13 N O2' 131.175 'CCD Core'
LYS 'L-peptide linking' LYSINE 'C6 H15 N2 O2 1' 147.198 'CCD Core'
MET 'L-peptide linking' METHIONINE 'C5 H11 N O2 S' 149.208 'CCD Core'
PHE 'L-peptide linking' PHENYLALANINE 'C9 H11 N O2' 165.192 'CCD Core'
PRO 'L-peptide linking' PROLINE 'C5 H9 N O2' 115.132 'CCD Core'
SER 'L-peptide linking' SERINE 'C3 H7 N O3' 105.093 'CCD Core'
THR 'L-peptide linking' THREONINE 'C4 H9 N O3' 119.120 'CCD Core'
TRP 'L-peptide linking' TRYPTOPHAN 'C11 H12 N2 O2' 204.229 'CCD Core'
TYR 'L-peptide linking' TYROSINE 'C9 H11 N O3' 181.191 'CCD Core'
VAL 'L-peptide linking' VALINE 'C5 H11 N O2' 117.148 'CCD Core'
#
#
loop_
_entity.id
_entity.type
_entity.src_method
_entity.pdbx_description
_entity.formula_weight
_entity.pdbx_number_of_molecules
_entity.details
1 polymer man . 3477.957 1 .
#
#
loop_
_struct_ref.id
_struct_ref.entity_id
_struct_ref.db_name
_struct_ref.db_code
_struct_ref.pdbx_db_accession
_struct_ref.pdbx_align_begin
_struct_ref.pdbx_seq_one_letter_code
_struct_ref.details
1 1 UNP DMS8_PHAJA P86640 1 GLWKSLLKNVGKAAGKAALNAVTDMVNQA Dermaseptin-J8
#
#
loop_
_struct_ref_seq.align_id
_struct_ref_seq.ref_id
_struct_ref_seq.seq_align_beg
_struct_ref_seq.seq_align_end
_struct_ref_seq.db_align_beg
_struct_ref_seq.db_align_end
1 1 1 29 1 29
#
#
loop_
_ma_target_ref_db_details.target_entity_id
_ma_target_ref_db_details.db_name
_ma_target_ref_db_details.db_name_other_details
_ma_target_ref_db_details.db_code
_ma_target_ref_db_details.db_accession
_ma_target_ref_db_details.seq_db_isoform
_ma_target_ref_db_details.seq_db_align_begin
_ma_target_ref_db_details.seq_db_align_end
_ma_target_ref_db_details.ncbi_taxonomy_id
_ma_target_ref_db_details.organism_scientific
_ma_target_ref_db_details.seq_db_sequence_version_date
_ma_target_ref_db_details.seq_db_sequence_checksum
1 UNP . DMS8_PHAJA P86640 . 1 29 762504
'Phasmahyla jandaia (Jandaia leaf frog) (Phyllomedusa jandaia)' 2011-02-08
CD64901BAFB9C37C
#
#
loop_
_entity_poly.entity_id
_entity_poly.type
_entity_poly.nstd_linkage
_entity_poly.nstd_monomer
_entity_poly.pdbx_strand_id
_entity_poly.pdbx_seq_one_letter_code
_entity_poly.pdbx_seq_one_letter_code_can
1 polypeptide(L) no no A GLWKSLLKNVGKAAGKAALNAVTDMVNQA
GLWKSLLKNVGKAAGKAALNAVTDMVNQA
#
#
loop_
_entity_poly_seq.entity_id
_entity_poly_seq.num
_entity_poly_seq.mon_id
_entity_poly_seq.hetero
1 1 GLY .
1 2 LEU .
1 3 TRP .
1 4 LYS .
1 5 SER .
1 6 LEU .
1 7 LEU .
1 8 LYS .
1 9 ASN .
1 10 VAL .
1 11 GLY .
1 12 LYS .
1 13 ALA .
1 14 ALA .
1 15 GLY .
1 16 LYS .
1 17 ALA .
1 18 ALA .
1 19 LEU .
1 20 ASN .
1 21 ALA .
1 22 VAL .
1 23 THR .
1 24 ASP .
1 25 MET .
1 26 VAL .
1 27 ASN .
1 28 GLN .
1 29 ALA .
#
#
loop_
_struct_asym.id
_struct_asym.entity_id
_struct_asym.details
A 1 .
#
#
loop_
_pdbx_poly_seq_scheme.asym_id
_pdbx_poly_seq_scheme.entity_id
_pdbx_poly_seq_scheme.seq_id
_pdbx_poly_seq_scheme.mon_id
_pdbx_poly_seq_scheme.pdb_seq_num
_pdbx_poly_seq_scheme.auth_seq_num
_pdbx_poly_seq_scheme.pdb_mon_id
_pdbx_poly_seq_scheme.auth_mon_id
_pdbx_poly_seq_scheme.pdb_strand_id
_pdbx_poly_seq_scheme.pdb_ins_code
A 1 1 GLY 1 ? ? ? A .
A 1 2 LEU 2 2 LEU LEU A .
A 1 3 TRP 3 3 TRP TRP A .
A 1 4 LYS 4 4 LYS LYS A .
A 1 5 SER 5 5 SER SER A .
A 1 6 LEU 6 6 LEU LEU A .
A 1 7 LEU 7 7 LEU LEU A .
A 1 8 LYS 8 8 LYS LYS A .
A 1 9 ASN 9 9 ASN ASN A .
A 1 10 VAL 10 10 VAL VAL A .
A 1 11 GLY 11 11 GLY GLY A .
A 1 12 LYS 12 12 LYS LYS A .
A 1 13 ALA 13 13 ALA ALA A .
A 1 14 ALA 14 14 ALA ALA A .
A 1 15 GLY 15 15 GLY GLY A .
A 1 16 LYS 16 16 LYS LYS A .
A 1 17 ALA 17 17 ALA ALA A .
A 1 18 ALA 18 18 ALA ALA A .
A 1 19 LEU 19 19 LEU LEU A .
A 1 20 ASN 20 20 ASN ASN A .
A 1 21 ALA 21 21 ALA ALA A .
A 1 22 VAL 22 22 VAL VAL A .
A 1 23 THR 23 23 THR THR A .
A 1 24 ASP 24 24 ASP ASP A .
A 1 25 MET 25 25 MET MET A .
A 1 26 VAL 26 26 VAL VAL A .
A 1 27 ASN 27 27 ASN ASN A .
A 1 28 GLN 28 28 GLN GLN A .
A 1 29 ALA 29 ? ? ? A .
#
#
loop_
_ma_data.id
_ma_data.name
_ma_data.content_type
_ma_data.content_type_other_details
1
'Periplasmic protein {PDB ID=4fgo, label_asym_id=A, auth_asym_id=A, SMTL ID=4fgo.1.A}'
'template structure' .
2 . target .
3 'Target-template alignment by HHblits to 4fgo, label_asym_id=A'
'target-template alignment' .
4 'model 2' 'model coordinates' .
5 SMTL 'reference database' .
6 PDB 'reference database' .
7 'Template search output' other 'Results of the sequence search'
#
#
loop_
_ma_data_group.ordinal_id
_ma_data_group.group_id
_ma_data_group.data_id
1 1 2
2 1 5
3 1 6
4 2 7
5 3 2
6 3 1
7 3 3
8 4 1
9 4 3
10 5 4
#
#
loop_
_ma_data_ref_db.data_id
_ma_data_ref_db.name
_ma_data_ref_db.location_url
_ma_data_ref_db.version
_ma_data_ref_db.release_date
5 SMTL https://swissmodel.expasy.org/templates/ . 2025-05-01
6 PDB https://www.wwpdb.org . 2025-05-01
#
#
loop_
_ma_target_entity.entity_id
_ma_target_entity.data_id
_ma_target_entity.origin
1 2 'reference database'
#
#
loop_
_ma_target_entity_instance.asym_id
_ma_target_entity_instance.entity_id
_ma_target_entity_instance.details
A 1 .
#
#
loop_
_ma_template_trans_matrix.id
_ma_template_trans_matrix.rot_matrix[1][1]
_ma_template_trans_matrix.rot_matrix[2][1]
_ma_template_trans_matrix.rot_matrix[3][1]
_ma_template_trans_matrix.rot_matrix[1][2]
_ma_template_trans_matrix.rot_matrix[2][2]
_ma_template_trans_matrix.rot_matrix[3][2]
_ma_template_trans_matrix.rot_matrix[1][3]
_ma_template_trans_matrix.rot_matrix[2][3]
_ma_template_trans_matrix.rot_matrix[3][3]
_ma_template_trans_matrix.tr_vector[1]
_ma_template_trans_matrix.tr_vector[2]
_ma_template_trans_matrix.tr_vector[3]
1 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000
1.000000 0 0 0
#
#
loop_
_ma_template_details.ordinal_id
_ma_template_details.template_id
_ma_template_details.template_origin
_ma_template_details.template_entity_type
_ma_template_details.template_trans_matrix_id
_ma_template_details.template_data_id
_ma_template_details.target_asym_id
_ma_template_details.template_label_asym_id
_ma_template_details.template_label_entity_id
_ma_template_details.template_model_num
_ma_template_details.template_auth_asym_id
1 1 'reference database' polymer 1 1 A A 1 1 A
#
#
loop_
_ma_template_poly.template_id
_ma_template_poly.seq_one_letter_code
_ma_template_poly.seq_one_letter_code_can
1
;STQAAPLISVEKIQKLAQSYQGDTRKRFTAWGNLIDSLKKKPVKIQLEKVNSFFNQFNYETDPITGASDD
YWKSPVEFIVDGGGDCEDFAIIKYFTLVAVGVPSDQLRITYAASLTLNQAHMVLSFYPTPESEPLILDSL
ESKILKASARPDLKPVYSFNAEGLWLAKTRGESSLMGDSKSLGKWDALMKRME
;

;STQAAPLISVEKIQKLAQSYQGDTRKRFTAWGNLIDSLKKKPVKIQLEKVNSFFNQFNYETDPITGASDD
YWKSPVEFIVDGGGDCEDFAIIKYFTLVAVGVPSDQLRITYAASLTLNQAHMVLSFYPTPESEPLILDSL
ESKILKASARPDLKPVYSFNAEGLWLAKTRGESSLMGDSKSLGKWDALMKRME
;

#
#
loop_
_ma_template_poly_segment.id
_ma_template_poly_segment.template_id
_ma_template_poly_segment.residue_number_begin
_ma_template_poly_segment.residue_number_end
1 1 30 56
#
#
loop_
_ma_template_ref_db_details.template_id
_ma_template_ref_db_details.db_name
_ma_template_ref_db_details.db_name_other_details
_ma_template_ref_db_details.db_accession_code
_ma_template_ref_db_details.db_version_date
1 PDB . 4fgo 2024-10-16
#
#
loop_
_ma_target_template_poly_mapping.id
_ma_target_template_poly_mapping.template_segment_id
_ma_target_template_poly_mapping.target_asym_id
_ma_target_template_poly_mapping.target_seq_id_begin
_ma_target_template_poly_mapping.target_seq_id_end
1 1 A 1 29
#
#
loop_
_ma_alignment_info.alignment_id
_ma_alignment_info.data_id
_ma_alignment_info.software_group_id
_ma_alignment_info.alignment_length
_ma_alignment_info.alignment_type
_ma_alignment_info.alignment_mode
1 3 1 29 'target-template pairwise alignment' local
#
#
loop_
_ma_alignment_details.ordinal_id
_ma_alignment_details.alignment_id
_ma_alignment_details.template_segment_id
_ma_alignment_details.target_asym_id
_ma_alignment_details.score_type
_ma_alignment_details.score_type_other_details
_ma_alignment_details.score_value
_ma_alignment_details.percent_sequence_identity
_ma_alignment_details.sequence_identity_denominator
_ma_alignment_details.sequence_identity_denominator_other_details
1 1 1 A 'HHblits e-value' . 6.300 29.630
'Number of aligned residue pairs (not including the gaps)' .
#
#
loop_
_ma_alignment.ordinal_id
_ma_alignment.alignment_id
_ma_alignment.target_template_flag
_ma_alignment.sequence
1 1 1 GLWKSLLKNVGKAAGKAALNAVTDMVNQA
2 1 2 -AWGNLIDSLKKKPVKIQLEKVNSFFNQ-
#
#
loop_
_ma_protocol_step.ordinal_id
_ma_protocol_step.protocol_id
_ma_protocol_step.step_id
_ma_protocol_step.method_type
_ma_protocol_step.step_name
_ma_protocol_step.details
_ma_protocol_step.software_group_id
_ma_protocol_step.input_data_group_id
_ma_protocol_step.output_data_group_id
1 1 1 'template search' 'template search' 'SWISS-MODEL template search in PDB' 2
1 2
2 1 2 'template selection' 'template selection'
'Automatic template selection by SWISS-MODEL' 3 2 4
3 1 3 modeling 'homology modeling'
'SWISS-MODEL auto-model mode using ProMod3 on 4fgo.1' 4 3 5
#
#
loop_
_ma_model_list.ordinal_id
_ma_model_list.model_id
_ma_model_list.model_group_id
_ma_model_list.model_name
_ma_model_list.model_group_name
_ma_model_list.data_id
_ma_model_list.model_type
_ma_model_list.model_type_other_details
1 1 1 'model 2' . 4 'Homology model' .
#
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_alt_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.auth_seq_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.label_entity_id
_atom_site.auth_asym_id
_atom_site.auth_comp_id
_atom_site.B_iso_or_equiv
_atom_site.pdbx_PDB_model_num
ATOM 1 N N . LEU 2 2 ? A -28.999 7.732 24.274 1 1 A LEU 0.790 1
ATOM 2 C CA . LEU 2 2 ? A -28.749 6.281 24.601 1 1 A LEU 0.790 1
ATOM 3 C C . LEU 2 2 ? A -27.376 5.773 24.203 1 1 A LEU 0.790 1
ATOM 4 O O . LEU 2 2 ? A -26.636 5.321 25.062 1 1 A LEU 0.790 1
ATOM 5 C CB . LEU 2 2 ? A -29.882 5.410 24.010 1 1 A LEU 0.790 1
ATOM 6 C CG . LEU 2 2 ? A -31.276 5.700 24.610 1 1 A LEU 0.790 1
ATOM 7 C CD1 . LEU 2 2 ? A -32.347 4.929 23.823 1 1 A LEU 0.790 1
ATOM 8 C CD2 . LEU 2 2 ? A -31.356 5.328 26.104 1 1 A LEU 0.790 1
ATOM 9 N N . TRP 3 3 ? A -26.961 5.909 22.917 1 1 A TRP 0.760 1
ATOM 10 C CA . TRP 3 3 ? A -25.636 5.528 22.452 1 1 A TRP 0.760 1
ATOM 11 C C . TRP 3 3 ? A -24.475 6.159 23.243 1 1 A TRP 0.760 1
ATOM 12 O O . TRP 3 3 ? A -23.564 5.489 23.701 1 1 A TRP 0.760 1
ATOM 13 C CB . TRP 3 3 ? A -25.538 5.951 20.957 1 1 A TRP 0.760 1
ATOM 14 C CG . TRP 3 3 ? A -24.277 5.509 20.248 1 1 A TRP 0.760 1
ATOM 15 C CD1 . TRP 3 3 ? A -23.571 4.357 20.447 1 1 A TRP 0.760 1
ATOM 16 C CD2 . TRP 3 3 ? A -23.539 6.263 19.261 1 1 A TRP 0.760 1
ATOM 17 N NE1 . TRP 3 3 ? A -22.443 4.335 19.661 1 1 A TRP 0.760 1
ATOM 18 C CE2 . TRP 3 3 ? A -22.415 5.501 18.925 1 1 A TRP 0.760 1
ATOM 19 C CE3 . TRP 3 3 ? A -23.776 7.508 18.671 1 1 A TRP 0.760 1
ATOM 20 C CZ2 . TRP 3 3 ? A -21.492 5.952 17.987 1 1 A TRP 0.760 1
ATOM 21 C CZ3 . TRP 3 3 ? A -22.847 7.963 17.719 1 1 A TRP 0.760 1
ATOM 22 C CH2 . TRP 3 3 ? A -21.725 7.197 17.382 1 1 A TRP 0.760 1
ATOM 23 N N . LYS 4 4 ? A -24.541 7.488 23.480 1 1 A LYS 0.620 1
ATOM 24 C CA . LYS 4 4 ? A -23.540 8.226 24.233 1 1 A LYS 0.620 1
ATOM 25 C C . LYS 4 4 ? A -23.407 7.834 25.688 1 1 A LYS 0.620 1
ATOM 26 O O . LYS 4 4 ? A -22.307 7.708 26.217 1 1 A LYS 0.620 1
ATOM 27 C CB . LYS 4 4 ? A -23.876 9.727 24.207 1 1 A LYS 0.620 1
ATOM 28 C CG . LYS 4 4 ? A -23.727 10.316 22.806 1 1 A LYS 0.620 1
ATOM 29 C CD . LYS 4 4 ? A -24.080 11.808 22.792 1 1 A LYS 0.620 1
ATOM 30 C CE . LYS 4 4 ? A -23.905 12.440 21.408 1 1 A LYS 0.620 1
ATOM 31 N NZ . LYS 4 4 ? A -24.307 13.864 21.434 1 1 A LYS 0.620 1
ATOM 32 N N . SER 5 5 ? A -24.560 7.628 26.364 1 1 A SER 0.630 1
ATOM 33 C CA . SER 5 5 ? A -24.655 7.129 27.720 1 1 A SER 0.630 1
ATOM 34 C C . SER 5 5 ? A -24.013 5.772 27.827 1 1 A SER 0.630 1
ATOM 35 O O . SER 5 5 ? A -23.283 5.500 28.755 1 1 A SER 0.630 1
ATOM 36 C CB . SER 5 5 ? A -26.118 6.945 28.206 1 1 A SER 0.630 1
ATOM 37 O OG . SER 5 5 ? A -26.930 8.104 28.002 1 1 A SER 0.630 1
ATOM 38 N N . LEU 6 6 ? A -24.239 4.902 26.814 1 1 A LEU 0.600 1
ATOM 39 C CA . LEU 6 6 ? A -23.598 3.612 26.742 1 1 A LEU 0.600 1
ATOM 40 C C . LEU 6 6 ? A -22.076 3.677 26.726 1 1 A LEU 0.600 1
ATOM 41 O O . LEU 6 6 ? A -21.428 3.039 27.538 1 1 A LEU 0.600 1
ATOM 42 C CB . LEU 6 6 ? A -24.058 2.881 25.468 1 1 A LEU 0.600 1
ATOM 43 C CG . LEU 6 6 ? A -24.093 1.358 25.634 1 1 A LEU 0.600 1
ATOM 44 C CD1 . LEU 6 6 ? A -25.564 0.949 25.765 1 1 A LEU 0.600 1
ATOM 45 C CD2 . LEU 6 6 ? A -23.367 0.644 24.479 1 1 A LEU 0.600 1
ATOM 46 N N . LEU 7 7 ? A -21.479 4.523 25.852 1 1 A LEU 0.590 1
ATOM 47 C CA . LEU 7 7 ? A -20.038 4.717 25.764 1 1 A LEU 0.590 1
ATOM 48 C C . LEU 7 7 ? A -19.410 5.242 27.044 1 1 A LEU 0.590 1
ATOM 49 O O . LEU 7 7 ? A -18.355 4.788 27.472 1 1 A LEU 0.590 1
ATOM 50 C CB . LEU 7 7 ? A -19.675 5.680 24.614 1 1 A LEU 0.590 1
ATOM 51 C CG . LEU 7 7 ? A -19.923 5.112 23.203 1 1 A LEU 0.590 1
ATOM 52 C CD1 . LEU 7 7 ? A -19.685 6.229 22.176 1 1 A LEU 0.590 1
ATOM 53 C CD2 . LEU 7 7 ? A -19.019 3.900 22.898 1 1 A LEU 0.590 1
ATOM 54 N N . LYS 8 8 ? A -20.081 6.208 27.699 1 1 A LYS 0.560 1
ATOM 55 C CA . LYS 8 8 ? A -19.699 6.699 29.009 1 1 A LYS 0.560 1
ATOM 56 C C . LYS 8 8 ? A -19.807 5.661 30.124 1 1 A LYS 0.560 1
ATOM 57 O O . LYS 8 8 ? A -18.917 5.573 30.966 1 1 A LYS 0.560 1
ATOM 58 C CB . LYS 8 8 ? A -20.516 7.963 29.356 1 1 A LYS 0.560 1
ATOM 59 C CG . LYS 8 8 ? A -20.156 9.144 28.439 1 1 A LYS 0.560 1
ATOM 60 C CD . LYS 8 8 ? A -20.928 10.423 28.791 1 1 A LYS 0.560 1
ATOM 61 C CE . LYS 8 8 ? A -20.549 11.615 27.907 1 1 A LYS 0.560 1
ATOM 62 N NZ . LYS 8 8 ? A -21.351 12.798 28.292 1 1 A LYS 0.560 1
ATOM 63 N N . ASN 9 9 ? A -20.878 4.836 30.130 1 1 A ASN 0.490 1
ATOM 64 C CA . ASN 9 9 ? A -21.090 3.713 31.038 1 1 A ASN 0.490 1
ATOM 65 C C . ASN 9 9 ? A -20.057 2.589 30.915 1 1 A ASN 0.490 1
ATOM 66 O O . ASN 9 9 ? A -19.683 1.977 31.907 1 1 A ASN 0.490 1
ATOM 67 C CB . ASN 9 9 ? A -22.481 3.051 30.813 1 1 A ASN 0.490 1
ATOM 68 C CG . ASN 9 9 ? A -23.620 3.958 31.270 1 1 A ASN 0.490 1
ATOM 69 O OD1 . ASN 9 9 ? A -23.479 4.864 32.069 1 1 A ASN 0.490 1
ATOM 70 N ND2 . ASN 9 9 ? A -24.847 3.665 30.753 1 1 A ASN 0.490 1
ATOM 71 N N . VAL 10 10 ? A -19.603 2.255 29.683 1 1 A VAL 0.540 1
ATOM 72 C CA . VAL 10 10 ? A -18.723 1.112 29.445 1 1 A VAL 0.540 1
ATOM 73 C C . VAL 10 10 ? A -17.246 1.464 29.531 1 1 A VAL 0.540 1
ATOM 74 O O . VAL 10 10 ? A -16.380 0.591 29.467 1 1 A VAL 0.540 1
ATOM 75 C CB . VAL 10 10 ? A -18.949 0.448 28.082 1 1 A VAL 0.540 1
ATOM 76 C CG1 . VAL 10 10 ? A -20.400 -0.078 28.003 1 1 A VAL 0.540 1
ATOM 77 C CG2 . VAL 10 10 ? A -18.604 1.421 26.931 1 1 A VAL 0.540 1
ATOM 78 N N . GLY 11 11 ? A -16.898 2.759 29.695 1 1 A GLY 0.450 1
ATOM 79 C CA . GLY 11 11 ? A -15.531 3.185 29.971 1 1 A GLY 0.450 1
ATOM 80 C C . GLY 11 11 ? A -14.979 2.589 31.244 1 1 A GLY 0.450 1
ATOM 81 O O . GLY 11 11 ? A -15.621 2.629 32.282 1 1 A GLY 0.450 1
ATOM 82 N N . LYS 12 12 ? A -13.759 2.008 31.184 1 1 A LYS 0.280 1
ATOM 83 C CA . LYS 12 12 ? A -13.105 1.350 32.313 1 1 A LYS 0.280 1
ATOM 84 C C . LYS 12 12 ? A -13.757 0.062 32.783 1 1 A LYS 0.280 1
ATOM 85 O O . LYS 12 12 ? A -13.338 -0.522 33.778 1 1 A LYS 0.280 1
ATOM 86 C CB . LYS 12 12 ? A -12.832 2.299 33.521 1 1 A LYS 0.280 1
ATOM 87 C CG . LYS 12 12 ? A -11.876 3.460 33.207 1 1 A LYS 0.280 1
ATOM 88 C CD . LYS 12 12 ? A -10.447 2.991 32.887 1 1 A LYS 0.280 1
ATOM 89 C CE . LYS 12 12 ? A -9.516 4.141 32.506 1 1 A LYS 0.280 1
ATOM 90 N NZ . LYS 12 12 ? A -8.227 3.590 32.036 1 1 A LYS 0.280 1
ATOM 91 N N . ALA 13 13 ? A -14.743 -0.463 32.035 1 1 A ALA 0.430 1
ATOM 92 C CA . ALA 13 13 ? A -15.364 -1.716 32.350 1 1 A ALA 0.430 1
ATOM 93 C C . ALA 13 13 ? A -14.602 -2.874 31.735 1 1 A ALA 0.430 1
ATOM 94 O O . ALA 13 13 ? A -13.804 -2.729 30.805 1 1 A ALA 0.430 1
ATOM 95 C CB . ALA 13 13 ? A -16.834 -1.686 31.884 1 1 A ALA 0.430 1
ATOM 96 N N . ALA 14 14 ? A -14.814 -4.082 32.286 1 1 A ALA 0.470 1
ATOM 97 C CA . ALA 14 14 ? A -14.226 -5.309 31.796 1 1 A ALA 0.470 1
ATOM 98 C C . ALA 14 14 ? A -14.594 -5.632 30.344 1 1 A ALA 0.470 1
ATOM 99 O O . ALA 14 14 ? A -15.742 -5.485 29.929 1 1 A ALA 0.470 1
ATOM 100 C CB . ALA 14 14 ? A -14.650 -6.484 32.705 1 1 A ALA 0.470 1
ATOM 101 N N . GLY 15 15 ? A -13.630 -6.119 29.527 1 1 A GLY 0.650 1
ATOM 102 C CA . GLY 15 15 ? A -13.841 -6.335 28.091 1 1 A GLY 0.650 1
ATOM 103 C C . GLY 15 15 ? A -14.965 -7.271 27.701 1 1 A GLY 0.650 1
ATOM 104 O O . GLY 15 15 ? A -15.666 -7.042 26.729 1 1 A GLY 0.650 1
ATOM 105 N N . LYS 16 16 ? A -15.214 -8.322 28.504 1 1 A LYS 0.660 1
ATOM 106 C CA . LYS 16 16 ? A -16.369 -9.199 28.387 1 1 A LYS 0.660 1
ATOM 107 C C . LYS 16 16 ? A -17.721 -8.501 28.586 1 1 A LYS 0.660 1
ATOM 108 O O . LYS 16 16 ? A -18.688 -8.805 27.900 1 1 A LYS 0.660 1
ATOM 109 C CB . LYS 16 16 ? A -16.242 -10.421 29.346 1 1 A LYS 0.660 1
ATOM 110 C CG . LYS 16 16 ? A -15.929 -10.085 30.819 1 1 A LYS 0.660 1
ATOM 111 C CD . LYS 16 16 ? A -16.081 -11.304 31.749 1 1 A LYS 0.660 1
ATOM 112 C CE . LYS 16 16 ? A -15.446 -11.096 33.131 1 1 A LYS 0.660 1
ATOM 113 N NZ . LYS 16 16 ? A -15.599 -12.317 33.954 1 1 A LYS 0.660 1
ATOM 114 N N . ALA 17 17 ? A -17.822 -7.530 29.527 1 1 A ALA 0.700 1
ATOM 115 C CA . ALA 17 17 ? A -19.002 -6.708 29.704 1 1 A ALA 0.700 1
ATOM 116 C C . ALA 17 17 ? A -19.217 -5.779 28.517 1 1 A ALA 0.700 1
ATOM 117 O O . ALA 17 17 ? A -20.323 -5.670 28.000 1 1 A ALA 0.700 1
ATOM 118 C CB . ALA 17 17 ? A -18.862 -5.858 30.987 1 1 A ALA 0.700 1
ATOM 119 N N . ALA 18 18 ? A -18.127 -5.127 28.039 1 1 A ALA 0.630 1
ATOM 120 C CA . ALA 18 18 ? A -18.150 -4.222 26.909 1 1 A ALA 0.630 1
ATOM 121 C C . ALA 18 18 ? A -18.581 -4.894 25.613 1 1 A ALA 0.630 1
ATOM 122 O O . ALA 18 18 ? A -19.450 -4.393 24.912 1 1 A ALA 0.630 1
ATOM 123 C CB . ALA 18 18 ? A -16.750 -3.599 26.707 1 1 A ALA 0.630 1
ATOM 124 N N . LEU 19 19 ? A -18.018 -6.085 25.296 1 1 A LEU 0.730 1
ATOM 125 C CA . LEU 19 19 ? A -18.417 -6.861 24.136 1 1 A LEU 0.730 1
ATOM 126 C C . LEU 19 19 ? A -19.869 -7.284 24.176 1 1 A LEU 0.730 1
ATOM 127 O O . LEU 19 19 ? A -20.610 -7.026 23.240 1 1 A LEU 0.730 1
ATOM 128 C CB . LEU 19 19 ? A -17.586 -8.164 24.012 1 1 A LEU 0.730 1
ATOM 129 C CG . LEU 19 19 ? A -16.088 -7.985 23.694 1 1 A LEU 0.730 1
ATOM 130 C CD1 . LEU 19 19 ? A -15.369 -9.339 23.829 1 1 A LEU 0.730 1
ATOM 131 C CD2 . LEU 19 19 ? A -15.856 -7.378 22.302 1 1 A LEU 0.730 1
ATOM 132 N N . ASN 20 20 ? A -20.328 -7.900 25.291 1 1 A ASN 0.720 1
ATOM 133 C CA . ASN 20 20 ? A -21.703 -8.352 25.383 1 1 A ASN 0.720 1
ATOM 134 C C . ASN 20 20 ? A -22.688 -7.190 25.329 1 1 A ASN 0.720 1
ATOM 135 O O . ASN 20 20 ? A -23.564 -7.163 24.478 1 1 A ASN 0.720 1
ATOM 136 C CB . ASN 20 20 ? A -21.911 -9.202 26.664 1 1 A ASN 0.720 1
ATOM 137 C CG . ASN 20 20 ? A -21.183 -10.538 26.507 1 1 A ASN 0.720 1
ATOM 138 O OD1 . ASN 20 20 ? A -20.845 -10.993 25.429 1 1 A ASN 0.720 1
ATOM 139 N ND2 . ASN 20 20 ? A -20.941 -11.220 27.658 1 1 A ASN 0.720 1
ATOM 140 N N . ALA 21 21 ? A -22.493 -6.135 26.151 1 1 A ALA 0.720 1
ATOM 141 C CA . ALA 21 21 ? A -23.401 -5.008 26.188 1 1 A ALA 0.720 1
ATOM 142 C C . ALA 21 21 ? A -23.465 -4.206 24.892 1 1 A ALA 0.720 1
ATOM 143 O O . ALA 21 21 ? A -24.548 -3.812 24.467 1 1 A ALA 0.720 1
ATOM 144 C CB . ALA 21 21 ? A -23.068 -4.081 27.375 1 1 A ALA 0.720 1
ATOM 145 N N . VAL 22 22 ? A -22.327 -3.951 24.202 1 1 A VAL 0.670 1
ATOM 146 C CA . VAL 22 22 ? A -22.344 -3.307 22.891 1 1 A VAL 0.670 1
ATOM 147 C C . VAL 22 22 ? A -23.052 -4.158 21.848 1 1 A VAL 0.670 1
ATOM 148 O O . VAL 22 22 ? A -23.912 -3.658 21.131 1 1 A VAL 0.670 1
ATOM 149 C CB . VAL 22 22 ? A -20.941 -2.951 22.400 1 1 A VAL 0.670 1
ATOM 150 C CG1 . VAL 22 22 ? A -20.933 -2.469 20.929 1 1 A VAL 0.670 1
ATOM 151 C CG2 . VAL 22 22 ? A -20.384 -1.835 23.309 1 1 A VAL 0.670 1
ATOM 152 N N . THR 23 23 ? A -22.744 -5.478 21.782 1 1 A THR 0.730 1
ATOM 153 C CA . THR 23 23 ? A -23.371 -6.426 20.852 1 1 A THR 0.730 1
ATOM 154 C C . THR 23 23 ? A -24.870 -6.520 21.054 1 1 A THR 0.730 1
ATOM 155 O O . THR 23 23 ? A -25.640 -6.421 20.105 1 1 A THR 0.730 1
ATOM 156 C CB . THR 23 23 ? A -22.827 -7.847 21.004 1 1 A THR 0.730 1
ATOM 157 O OG1 . THR 23 23 ? A -21.463 -7.919 20.631 1 1 A THR 0.730 1
ATOM 158 C CG2 . THR 23 23 ? A -23.520 -8.890 20.116 1 1 A THR 0.730 1
ATOM 159 N N . ASP 24 24 ? A -25.328 -6.657 22.315 1 1 A ASP 0.710 1
ATOM 160 C CA . ASP 24 24 ? A -26.726 -6.667 22.690 1 1 A ASP 0.710 1
ATOM 161 C C . ASP 24 24 ? A -27.432 -5.356 22.388 1 1 A ASP 0.710 1
ATOM 162 O O . ASP 24 24 ? A -28.556 -5.360 21.893 1 1 A ASP 0.710 1
ATOM 163 C CB . ASP 24 24 ? A -26.857 -7.017 24.192 1 1 A ASP 0.710 1
ATOM 164 C CG . ASP 24 24 ? A -26.515 -8.480 24.436 1 1 A ASP 0.710 1
ATOM 165 O OD1 . ASP 24 24 ? A -26.451 -9.261 23.451 1 1 A ASP 0.710 1
ATOM 166 O OD2 . ASP 24 24 ? A -26.342 -8.833 25.631 1 1 A ASP 0.710 1
ATOM 167 N N . MET 25 25 ? A -26.777 -4.197 22.635 1 1 A MET 0.650 1
ATOM 168 C CA . MET 25 25 ? A -27.333 -2.881 22.368 1 1 A MET 0.650 1
ATOM 169 C C . MET 25 25 ? A -27.675 -2.624 20.904 1 1 A MET 0.650 1
ATOM 170 O O . MET 25 25 ? A -28.696 -2.028 20.593 1 1 A MET 0.650 1
ATOM 171 C CB . MET 25 25 ? A -26.377 -1.739 22.817 1 1 A MET 0.650 1
ATOM 172 C CG . MET 25 25 ? A -27.049 -0.351 22.807 1 1 A MET 0.650 1
ATOM 173 S SD . MET 25 25 ? A -28.375 -0.237 24.054 1 1 A MET 0.650 1
ATOM 174 C CE . MET 25 25 ? A -29.087 1.311 23.444 1 1 A MET 0.650 1
ATOM 175 N N . VAL 26 26 ? A -26.800 -3.060 19.967 1 1 A VAL 0.600 1
ATOM 176 C CA . VAL 26 26 ? A -26.972 -2.802 18.543 1 1 A VAL 0.600 1
ATOM 177 C C . VAL 26 26 ? A -27.688 -3.913 17.798 1 1 A VAL 0.600 1
ATOM 178 O O . VAL 26 26 ? A -28.045 -3.747 16.640 1 1 A VAL 0.600 1
ATOM 179 C CB . VAL 26 26 ? A -25.637 -2.615 17.826 1 1 A VAL 0.600 1
ATOM 180 C CG1 . VAL 26 26 ? A -24.895 -1.417 18.455 1 1 A VAL 0.600 1
ATOM 181 C CG2 . VAL 26 26 ? A -24.790 -3.912 17.856 1 1 A VAL 0.600 1
ATOM 182 N N . ASN 27 27 ? A -27.917 -5.068 18.466 1 1 A ASN 0.770 1
ATOM 183 C CA . ASN 27 27 ? A -28.767 -6.129 17.961 1 1 A ASN 0.770 1
ATOM 184 C C . ASN 27 27 ? A -30.227 -5.904 18.381 1 1 A ASN 0.770 1
ATOM 185 O O . ASN 27 27 ? A -31.101 -6.680 18.000 1 1 A ASN 0.770 1
ATOM 186 C CB . ASN 27 27 ? A -28.299 -7.534 18.464 1 1 A ASN 0.770 1
ATOM 187 C CG . ASN 27 27 ? A -27.038 -8.008 17.735 1 1 A ASN 0.770 1
ATOM 188 O OD1 . ASN 27 27 ? A -26.420 -7.350 16.922 1 1 A ASN 0.770 1
ATOM 189 N ND2 . ASN 27 27 ? A -26.657 -9.288 18.019 1 1 A ASN 0.770 1
ATOM 190 N N . GLN 28 28 ? A -30.508 -4.823 19.144 1 1 A GLN 0.750 1
ATOM 191 C CA . GLN 28 28 ? A -31.833 -4.246 19.297 1 1 A GLN 0.750 1
ATOM 192 C C . GLN 28 28 ? A -32.217 -3.287 18.142 1 1 A GLN 0.750 1
ATOM 193 O O . GLN 28 28 ? A -31.398 -3.066 17.214 1 1 A GLN 0.750 1
ATOM 194 C CB . GLN 28 28 ? A -31.941 -3.430 20.611 1 1 A GLN 0.750 1
ATOM 195 C CG . GLN 28 28 ? A -31.863 -4.325 21.861 1 1 A GLN 0.750 1
ATOM 196 C CD . GLN 28 28 ? A -32.345 -3.605 23.117 1 1 A GLN 0.750 1
ATOM 197 O OE1 . GLN 28 28 ? A -31.706 -2.743 23.703 1 1 A GLN 0.750 1
ATOM 198 N NE2 . GLN 28 28 ? A -33.553 -4.009 23.590 1 1 A GLN 0.750 1
ATOM 199 O OXT . GLN 28 28 ? A -33.364 -2.757 18.196 1 1 A GLN 0.750 1
#
#
loop_
_atom_type.symbol
C
N
O
S
#
#
loop_
_ma_qa_metric.id
_ma_qa_metric.name
_ma_qa_metric.description
_ma_qa_metric.type
_ma_qa_metric.mode
_ma_qa_metric.type_other_details
_ma_qa_metric.software_group_id
1 QMEANDisCo 'Predicted accuracy according to all-atom lDDT in [0,1].'
'pLDDT all-atom in [0,1]' local . 5
2 QMEANDisCo 'Predicted accuracy according to all-atom lDDT in [0,1].'
'pLDDT all-atom in [0,1]' global . 5
3 GMQE
'Global Model Quality Estimate of the model accuracy, calculated by SWISS-MODEL.'
'normalized score' global . 6
#
#
loop_
_ma_qa_metric_global.ordinal_id
_ma_qa_metric_global.model_id
_ma_qa_metric_global.metric_id
_ma_qa_metric_global.metric_value
1 1 2 0.626
2 1 3 0.549
#
#
loop_
_ma_qa_metric_local.ordinal_id
_ma_qa_metric_local.model_id
_ma_qa_metric_local.label_asym_id
_ma_qa_metric_local.label_seq_id
_ma_qa_metric_local.label_comp_id
_ma_qa_metric_local.metric_id
_ma_qa_metric_local.metric_value
1 1 A 2 LEU 1 0.790
2 1 A 3 TRP 1 0.760
3 1 A 4 LYS 1 0.620
4 1 A 5 SER 1 0.630
5 1 A 6 LEU 1 0.600
6 1 A 7 LEU 1 0.590
7 1 A 8 LYS 1 0.560
8 1 A 9 ASN 1 0.490
9 1 A 10 VAL 1 0.540
10 1 A 11 GLY 1 0.450
11 1 A 12 LYS 1 0.280
12 1 A 13 ALA 1 0.430
13 1 A 14 ALA 1 0.470
14 1 A 15 GLY 1 0.650
15 1 A 16 LYS 1 0.660
16 1 A 17 ALA 1 0.700
17 1 A 18 ALA 1 0.630
18 1 A 19 LEU 1 0.730
19 1 A 20 ASN 1 0.720
20 1 A 21 ALA 1 0.720
21 1 A 22 VAL 1 0.670
22 1 A 23 THR 1 0.730
23 1 A 24 ASP 1 0.710
24 1 A 25 MET 1 0.650
25 1 A 26 VAL 1 0.600
26 1 A 27 ASN 1 0.770
27 1 A 28 GLN 1 0.750
#
#
loop_
_pdbx_data_usage.id
_pdbx_data_usage.type
_pdbx_data_usage.details
_pdbx_data_usage.url
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