data_SMR-26cc7724edb03857b62180357c5f81d6_1
_entry.id SMR-26cc7724edb03857b62180357c5f81d6_1
_struct.entry_id SMR-26cc7724edb03857b62180357c5f81d6_1
_struct.pdbx_model_details
;This model was generated unsupervised by the SWISS-MODEL homology-modelling pipeline for the SWISS-MODEL Repository, a database of annotated 3D protein structure models. The modelled monomer covers following UniProtKB entries:

  - P86238/ ODPX_MESAU, Pyruvate dehydrogenase protein X component, mitochondrial

Estimated model accuracy of this model is 0.845, calculated by SWISS-MODEL as Global Model Quality Estimate (GMQE).
;
_struct.pdbx_structure_determination_methodology computational
_struct.title 'Model for UniProtKB entries P86238'
_audit_conform.dict_location https://raw.githubusercontent.com/ihmwg/ModelCIF/d18ba38/base/mmcif_ma-core.dic
_audit_conform.dict_name mmcif_ma.dic
_audit_conform.dict_version 1.4.6
#
loop_
_citation.id
_citation.title
_citation.journal_abbrev
_citation.journal_volume
_citation.page_first
_citation.page_last
_citation.year
_citation.pdbx_database_id_PubMed
_citation.pdbx_database_id_DOI
primary 'The SWISS-MODEL Repository - new features and functionality'
'Nucleic Acids Res.' 45 D313 D319 2017 27899672 10.1093/nar/gkw1132
2 'SWISS-MODEL: homology modelling of protein structures and complexes'
'Nucleic Acids Res.' 46 W296 W303 2018 29788355 10.1093/nar/gky427
3 'ProMod3 - A versatile homology modelling toolbox' 'PLoS Comput. Biol.' 17(1)
1 18 2021 33507980 10.1371/journal.pcbi.1008667
4 'QMEANDisCo - distance constraints applied on model quality estimation'
Bioinformatics 36 1765 1771 2020 31697312 10.1093/bioinformatics/btz828
5
'OpenStructure: an integrated software framework for computational structural biology'
'Acta Crystallogr., Sect. D: Biol. Crystallogr.' 69 701 709 2013 23633579
10.1107/S0907444913007051
6 'BLAST+: architecture and applications' 'BMC Bioinf.' 10 421 . 2009 20003500
10.1186/1471-2105-10-421
7 'HH-suite3 for fast remote homology detection and deep protein annotation'
'BMC Bioinf.' 20 473 . 2019 31521110 10.1186/s12859-019-3019-7
#
#
loop_
_citation_author.citation_id
_citation_author.name
_citation_author.ordinal
primary 'Bienert, S.' 1
primary 'Waterhouse, A.' 2
primary 'de Beer, T.A.P.' 3
primary 'Tauriello, G.' 4
primary 'Studer, G.' 5
primary 'Bordoli, L.' 6
primary 'Schwede, T.' 7
2 'Waterhouse, A.' 8
2 'Bertoni, M.' 9
2 'Bienert, S.' 10
2 'Studer, G.' 11
2 'Tauriello, G.' 12
2 'Gumienny, R.' 13
2 'Heer, F.T.' 14
2 'de Beer, T.A.P.' 15
2 'Rempfer, C.' 16
2 'Bordoli, L.' 17
2 'Lepore, R.' 18
2 'Schwede, T.' 19
3 'Studer, G.' 20
3 'Tauriello, G.' 21
3 'Bienert, S.' 22
3 'Biasini, M.' 23
3 'Johner, N.' 24
3 'Schwede, T.' 25
4 'Studer, G.' 26
4 'Rempfer, C.' 27
4 'Waterhouse, A.M.' 28
4 'Gumienny, R.' 29
4 'Haas, J.' 30
4 'Schwede, T.' 31
5 'Biasini, M.' 32
5 'Schmidt, T.' 33
5 'Bienert, S.' 34
5 'Mariani, V.' 35
5 'Studer, G.' 36
5 'Haas, J.' 37
5 'Johner, N.' 38
5 'Schenk, A.D.' 39
5 'Philippsen, A.' 40
5 'Schwede, T.' 41
6 'Camacho, C.' 42
6 'Coulouris, G.' 43
6 'Avagyan, V.' 44
6 'Ma, N.' 45
6 'Papadopoulos, J.' 46
6 'Bealer, K.' 47
6 'Madden, T.L.' 48
7 'Steinegger, M.' 49
7 'Meier, M.' 50
7 'Mirdita, M.' 51
7 'Vohringer, H.' 52
7 'Haunsberger, S.J.' 53
7 'Soding, J.' 54
#
#
loop_
_software.pdbx_ordinal
_software.name
_software.classification
_software.description
_software.version
_software.type
_software.location
_software.citation_id
1 SWISS-MODEL 'model building' 'Homology modelling web service' 2025-04.4
package https://swissmodel.expasy.org 2
2 ProMod3 'model building' 'Modular homology modelling engine' 3.4.1 library
https://git.scicore.unibas.ch/schwede/ProMod3 3
3 QMEAN 'model building' 'QMEAN - Qualitative Model Energy ANalysis' 4.3.1
library https://git.scicore.unibas.ch/schwede/QMEAN 4
4 OpenStructure 'data processing'
'Open-Source Computational Structural Biology Framework' 2.8.0 package
https://openstructure.org/ 5
5 BLAST 'data collection' . 2.14.1 package https://blast.ncbi.nlm.nih.gov 6
6 HH-suite 'data collection' 'HH-suite3 for sensitive sequence searching' 3.2.0
package https://github.com/soedinglab/hh-suite 7
#
#
loop_
_ma_software_group.ordinal_id
_ma_software_group.group_id
_ma_software_group.software_id
_ma_software_group.parameter_group_id
1 1 5 .
2 2 1 .
3 2 4 .
4 2 5 .
5 2 6 .
6 3 1 .
7 3 4 .
8 4 1 .
9 4 2 .
10 4 4 .
11 5 3 .
12 6 1 .
13 6 3 .
14 6 4 .
#
#
loop_
_audit_author.name
_audit_author.pdbx_ordinal
'Bienert, S.' 1
'Waterhouse, A.' 2
'de Beer, T.A.P.' 3
'Tauriello, G.' 4
'Studer, G.' 5
'Bordoli, L.' 6
'Schwede, T.' 7
#
#
loop_
_chem_comp.id
_chem_comp.type
_chem_comp.name
_chem_comp.formula
_chem_comp.formula_weight
_chem_comp.ma_provenance
ALA 'L-peptide linking' ALANINE 'C3 H7 N O2' 89.094 'CCD Core'
ARG 'L-peptide linking' ARGININE 'C6 H15 N4 O2 1' 175.212 'CCD Core'
ASN 'L-peptide linking' ASPARAGINE 'C4 H8 N2 O3' 132.119 'CCD Core'
ASP 'L-peptide linking' 'ASPARTIC ACID' 'C4 H7 N O4' 133.103 'CCD Core'
GLN 'L-peptide linking' GLUTAMINE 'C5 H10 N2 O3' 146.146 'CCD Core'
GLU 'L-peptide linking' 'GLUTAMIC ACID' 'C5 H9 N O4' 147.130 'CCD Core'
GLY 'peptide linking' GLYCINE 'C2 H5 N O2' 75.067 'CCD Core'
HIS 'L-peptide linking' HISTIDINE 'C6 H10 N3 O2 1' 156.165 'CCD Core'
ILE 'L-peptide linking' ISOLEUCINE 'C6 H13 N O2' 131.175 'CCD Core'
LEU 'L-peptide linking' LEUCINE 'C6 H13 N O2' 131.175 'CCD Core'
LYS 'L-peptide linking' LYSINE 'C6 H15 N2 O2 1' 147.198 'CCD Core'
PHE 'L-peptide linking' PHENYLALANINE 'C9 H11 N O2' 165.192 'CCD Core'
PRO 'L-peptide linking' PROLINE 'C5 H9 N O2' 115.132 'CCD Core'
SER 'L-peptide linking' SERINE 'C3 H7 N O3' 105.093 'CCD Core'
THR 'L-peptide linking' THREONINE 'C4 H9 N O3' 119.120 'CCD Core'
VAL 'L-peptide linking' VALINE 'C5 H11 N O2' 117.148 'CCD Core'
#
#
loop_
_entity.id
_entity.type
_entity.src_method
_entity.pdbx_description
_entity.formula_weight
_entity.pdbx_number_of_molecules
_entity.details
1 polymer man . 3367.682 1 .
#
#
loop_
_struct_ref.id
_struct_ref.entity_id
_struct_ref.db_name
_struct_ref.db_code
_struct_ref.pdbx_db_accession
_struct_ref.pdbx_align_begin
_struct_ref.pdbx_seq_one_letter_code
_struct_ref.details
1 1 UNP ODPX_MESAU P86238 1 FRLSPAARNILEKHSLDASQGTATGPR
'Pyruvate dehydrogenase protein X component, mitochondrial'
#
#
loop_
_struct_ref_seq.align_id
_struct_ref_seq.ref_id
_struct_ref_seq.seq_align_beg
_struct_ref_seq.seq_align_end
_struct_ref_seq.db_align_beg
_struct_ref_seq.db_align_end
1 1 1 27 1 27
#
#
loop_
_ma_target_ref_db_details.target_entity_id
_ma_target_ref_db_details.db_name
_ma_target_ref_db_details.db_name_other_details
_ma_target_ref_db_details.db_code
_ma_target_ref_db_details.db_accession
_ma_target_ref_db_details.seq_db_isoform
_ma_target_ref_db_details.seq_db_align_begin
_ma_target_ref_db_details.seq_db_align_end
_ma_target_ref_db_details.ncbi_taxonomy_id
_ma_target_ref_db_details.organism_scientific
_ma_target_ref_db_details.seq_db_sequence_version_date
_ma_target_ref_db_details.seq_db_sequence_checksum
1 UNP . ODPX_MESAU P86238 . 1 27 10036 'Mesocricetus auratus (Golden hamster)'
2010-06-15 EFCB3239BBD584E6
#
#
loop_
_entity_poly.entity_id
_entity_poly.type
_entity_poly.nstd_linkage
_entity_poly.nstd_monomer
_entity_poly.pdbx_strand_id
_entity_poly.pdbx_seq_one_letter_code
_entity_poly.pdbx_seq_one_letter_code_can
1 polypeptide(L) no no C FRLSPAARNILEKHSLDASQGTATGPR FRLSPAARNILEKHSLDASQGTATGPR
#
#
loop_
_entity_poly_seq.entity_id
_entity_poly_seq.num
_entity_poly_seq.mon_id
_entity_poly_seq.hetero
1 1 PHE .
1 2 ARG .
1 3 LEU .
1 4 SER .
1 5 PRO .
1 6 ALA .
1 7 ALA .
1 8 ARG .
1 9 ASN .
1 10 ILE .
1 11 LEU .
1 12 GLU .
1 13 LYS .
1 14 HIS .
1 15 SER .
1 16 LEU .
1 17 ASP .
1 18 ALA .
1 19 SER .
1 20 GLN .
1 21 GLY .
1 22 THR .
1 23 ALA .
1 24 THR .
1 25 GLY .
1 26 PRO .
1 27 ARG .
#
#
loop_
_struct_asym.id
_struct_asym.entity_id
_struct_asym.details
A 1 .
#
#
loop_
_pdbx_poly_seq_scheme.asym_id
_pdbx_poly_seq_scheme.entity_id
_pdbx_poly_seq_scheme.seq_id
_pdbx_poly_seq_scheme.mon_id
_pdbx_poly_seq_scheme.pdb_seq_num
_pdbx_poly_seq_scheme.auth_seq_num
_pdbx_poly_seq_scheme.pdb_mon_id
_pdbx_poly_seq_scheme.auth_mon_id
_pdbx_poly_seq_scheme.pdb_strand_id
_pdbx_poly_seq_scheme.pdb_ins_code
A 1 1 PHE 1 ? ? ? C .
A 1 2 ARG 2 2 ARG ARG C .
A 1 3 LEU 3 3 LEU LEU C .
A 1 4 SER 4 4 SER SER C .
A 1 5 PRO 5 5 PRO PRO C .
A 1 6 ALA 6 6 ALA ALA C .
A 1 7 ALA 7 7 ALA ALA C .
A 1 8 ARG 8 8 ARG ARG C .
A 1 9 ASN 9 9 ASN ASN C .
A 1 10 ILE 10 10 ILE ILE C .
A 1 11 LEU 11 11 LEU LEU C .
A 1 12 GLU 12 12 GLU GLU C .
A 1 13 LYS 13 13 LYS LYS C .
A 1 14 HIS 14 14 HIS HIS C .
A 1 15 SER 15 15 SER SER C .
A 1 16 LEU 16 16 LEU LEU C .
A 1 17 ASP 17 17 ASP ASP C .
A 1 18 ALA 18 18 ALA ALA C .
A 1 19 SER 19 19 SER SER C .
A 1 20 GLN 20 20 GLN GLN C .
A 1 21 GLY 21 21 GLY GLY C .
A 1 22 THR 22 22 THR THR C .
A 1 23 ALA 23 23 ALA ALA C .
A 1 24 THR 24 24 THR THR C .
A 1 25 GLY 25 25 GLY GLY C .
A 1 26 PRO 26 26 PRO PRO C .
A 1 27 ARG 27 27 ARG ARG C .
#
#
loop_
_ma_data.id
_ma_data.name
_ma_data.content_type
_ma_data.content_type_other_details
1
'Pyruvate dehydrogenase protein X component {PDB ID=2f5z, label_asym_id=N, auth_asym_id=N, SMTL ID=2f5z.4.C}'
'template structure' .
2 . target .
3 'Target-template alignment by BLAST to 2f5z, label_asym_id=N'
'target-template alignment' .
4 'model 1' 'model coordinates' .
5 SMTL 'reference database' .
6 PDB 'reference database' .
7 'Template search output' other 'Results of the sequence search'
#
#
loop_
_ma_data_group.ordinal_id
_ma_data_group.group_id
_ma_data_group.data_id
1 1 2
2 1 5
3 1 6
4 2 7
5 3 2
6 3 1
7 3 3
8 4 1
9 4 3
10 5 4
#
#
loop_
_ma_data_ref_db.data_id
_ma_data_ref_db.name
_ma_data_ref_db.location_url
_ma_data_ref_db.version
_ma_data_ref_db.release_date
5 SMTL https://swissmodel.expasy.org/templates/ . 2025-05-07
6 PDB https://www.wwpdb.org . 2025-05-02
#
#
loop_
_ma_target_entity.entity_id
_ma_target_entity.data_id
_ma_target_entity.origin
1 2 'reference database'
#
#
loop_
_ma_target_entity_instance.asym_id
_ma_target_entity_instance.entity_id
_ma_target_entity_instance.details
A 1 .
#
#
loop_
_ma_template_trans_matrix.id
_ma_template_trans_matrix.rot_matrix[1][1]
_ma_template_trans_matrix.rot_matrix[2][1]
_ma_template_trans_matrix.rot_matrix[3][1]
_ma_template_trans_matrix.rot_matrix[1][2]
_ma_template_trans_matrix.rot_matrix[2][2]
_ma_template_trans_matrix.rot_matrix[3][2]
_ma_template_trans_matrix.rot_matrix[1][3]
_ma_template_trans_matrix.rot_matrix[2][3]
_ma_template_trans_matrix.rot_matrix[3][3]
_ma_template_trans_matrix.tr_vector[1]
_ma_template_trans_matrix.tr_vector[2]
_ma_template_trans_matrix.tr_vector[3]
1 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000
1.000000 0 0 0
#
#
loop_
_ma_template_details.ordinal_id
_ma_template_details.template_id
_ma_template_details.template_origin
_ma_template_details.template_entity_type
_ma_template_details.template_trans_matrix_id
_ma_template_details.template_data_id
_ma_template_details.target_asym_id
_ma_template_details.template_label_asym_id
_ma_template_details.template_label_entity_id
_ma_template_details.template_model_num
_ma_template_details.template_auth_asym_id
1 1 'reference database' polymer 1 1 A N 2 1 N
#
#
loop_
_ma_template_poly.template_id
_ma_template_poly.seq_one_letter_code
_ma_template_poly.seq_one_letter_code_can
1 GEHIPGTLRFRLSPAARNILEKHSLDASQGTATGPRGIFTKEDALKLVQLKQTGKILEHHHHHH
GEHIPGTLRFRLSPAARNILEKHSLDASQGTATGPRGIFTKEDALKLVQLKQTGKILEHHHHHH
#
#
loop_
_ma_template_poly_segment.id
_ma_template_poly_segment.template_id
_ma_template_poly_segment.residue_number_begin
_ma_template_poly_segment.residue_number_end
1 1 10 36
#
#
loop_
_ma_template_ref_db_details.template_id
_ma_template_ref_db_details.db_name
_ma_template_ref_db_details.db_name_other_details
_ma_template_ref_db_details.db_accession_code
_ma_template_ref_db_details.db_version_date
1 PDB . 2f5z 2024-10-30
#
#
loop_
_ma_target_template_poly_mapping.id
_ma_target_template_poly_mapping.template_segment_id
_ma_target_template_poly_mapping.target_asym_id
_ma_target_template_poly_mapping.target_seq_id_begin
_ma_target_template_poly_mapping.target_seq_id_end
1 1 A 1 27
#
#
loop_
_ma_alignment_info.alignment_id
_ma_alignment_info.data_id
_ma_alignment_info.software_group_id
_ma_alignment_info.alignment_length
_ma_alignment_info.alignment_type
_ma_alignment_info.alignment_mode
1 3 1 27 'target-template pairwise alignment' local
#
#
loop_
_ma_alignment_details.ordinal_id
_ma_alignment_details.alignment_id
_ma_alignment_details.template_segment_id
_ma_alignment_details.target_asym_id
_ma_alignment_details.score_type
_ma_alignment_details.score_type_other_details
_ma_alignment_details.score_value
_ma_alignment_details.percent_sequence_identity
_ma_alignment_details.sequence_identity_denominator
_ma_alignment_details.sequence_identity_denominator_other_details
1 1 1 A 'BLAST e-value' . 1.82e-13 100.000
'Number of aligned residue pairs (not including the gaps)' .
#
#
loop_
_ma_alignment.ordinal_id
_ma_alignment.alignment_id
_ma_alignment.target_template_flag
_ma_alignment.sequence
1 1 1 FRLSPAARNILEKHSLDASQGTATGPR
2 1 2 FRLSPAARNILEKHSLDASQGTATGPR
#
#
loop_
_ma_protocol_step.ordinal_id
_ma_protocol_step.protocol_id
_ma_protocol_step.step_id
_ma_protocol_step.method_type
_ma_protocol_step.step_name
_ma_protocol_step.details
_ma_protocol_step.software_group_id
_ma_protocol_step.input_data_group_id
_ma_protocol_step.output_data_group_id
1 1 1 'template search' 'template search' 'SWISS-MODEL template search in PDB' 2
1 2
2 1 2 'template selection' 'template selection'
'Automatic template selection by SWISS-MODEL {QSQE=0.000}' 3 2 4
3 1 3 modeling 'homology modeling'
'SWISS-MODEL auto-model mode using ProMod3 on 2f5z.4' 4 3 5
#
#
loop_
_ma_model_list.ordinal_id
_ma_model_list.model_id
_ma_model_list.model_group_id
_ma_model_list.model_name
_ma_model_list.model_group_name
_ma_model_list.data_id
_ma_model_list.model_type
_ma_model_list.model_type_other_details
1 1 1 'model 1' . 4 'Homology model' .
#
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_alt_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.auth_seq_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.label_entity_id
_atom_site.auth_asym_id
_atom_site.auth_comp_id
_atom_site.B_iso_or_equiv
_atom_site.pdbx_PDB_model_num
ATOM 1 N N . ARG 2 2 ? A 127.015 -176.499 24.158 1 1 C ARG 0.730 1
ATOM 2 C CA . ARG 2 2 ? A 125.511 -176.433 24.183 1 1 C ARG 0.730 1
ATOM 3 C C . ARG 2 2 ? A 124.964 -176.879 22.840 1 1 C ARG 0.730 1
ATOM 4 O O . ARG 2 2 ? A 125.477 -176.438 21.825 1 1 C ARG 0.730 1
ATOM 5 C CB . ARG 2 2 ? A 125.069 -174.963 24.472 1 1 C ARG 0.730 1
ATOM 6 C CG . ARG 2 2 ? A 125.266 -174.517 25.940 1 1 C ARG 0.730 1
ATOM 7 C CD . ARG 2 2 ? A 125.353 -172.997 26.169 1 1 C ARG 0.730 1
ATOM 8 N NE . ARG 2 2 ? A 124.043 -172.390 25.769 1 1 C ARG 0.730 1
ATOM 9 C CZ . ARG 2 2 ? A 123.722 -171.112 26.013 1 1 C ARG 0.730 1
ATOM 10 N NH1 . ARG 2 2 ? A 124.550 -170.309 26.671 1 1 C ARG 0.730 1
ATOM 11 N NH2 . ARG 2 2 ? A 122.583 -170.603 25.551 1 1 C ARG 0.730 1
ATOM 12 N N . LEU 3 3 ? A 123.950 -177.776 22.801 1 1 C LEU 0.820 1
ATOM 13 C CA . LEU 3 3 ? A 123.294 -178.163 21.561 1 1 C LEU 0.820 1
ATOM 14 C C . LEU 3 3 ? A 121.962 -177.428 21.501 1 1 C LEU 0.820 1
ATOM 15 O O . LEU 3 3 ? A 121.414 -177.033 22.525 1 1 C LEU 0.820 1
ATOM 16 C CB . LEU 3 3 ? A 123.002 -179.688 21.457 1 1 C LEU 0.820 1
ATOM 17 C CG . LEU 3 3 ? A 124.044 -180.640 22.085 1 1 C LEU 0.820 1
ATOM 18 C CD1 . LEU 3 3 ? A 123.517 -182.075 21.969 1 1 C LEU 0.820 1
ATOM 19 C CD2 . LEU 3 3 ? A 125.448 -180.563 21.464 1 1 C LEU 0.820 1
ATOM 20 N N . SER 4 4 ? A 121.411 -177.244 20.284 1 1 C SER 0.770 1
ATOM 21 C CA . SER 4 4 ? A 120.103 -176.644 20.062 1 1 C SER 0.770 1
ATOM 22 C C . SER 4 4 ? A 119.020 -177.737 20.097 1 1 C SER 0.770 1
ATOM 23 O O . SER 4 4 ? A 119.382 -178.916 20.132 1 1 C SER 0.770 1
ATOM 24 C CB . SER 4 4 ? A 120.088 -175.816 18.734 1 1 C SER 0.770 1
ATOM 25 O OG . SER 4 4 ? A 120.089 -176.637 17.562 1 1 C SER 0.770 1
ATOM 26 N N . PRO 5 5 ? A 117.705 -177.468 20.127 1 1 C PRO 0.820 1
ATOM 27 C CA . PRO 5 5 ? A 116.653 -178.481 19.978 1 1 C PRO 0.820 1
ATOM 28 C C . PRO 5 5 ? A 116.799 -179.414 18.785 1 1 C PRO 0.820 1
ATOM 29 O O . PRO 5 5 ? A 116.780 -180.632 18.974 1 1 C PRO 0.820 1
ATOM 30 C CB . PRO 5 5 ? A 115.348 -177.663 19.917 1 1 C PRO 0.820 1
ATOM 31 C CG . PRO 5 5 ? A 115.678 -176.385 20.692 1 1 C PRO 0.820 1
ATOM 32 C CD . PRO 5 5 ? A 117.133 -176.133 20.301 1 1 C PRO 0.820 1
ATOM 33 N N . ALA 6 6 ? A 116.956 -178.854 17.566 1 1 C ALA 0.870 1
ATOM 34 C CA . ALA 6 6 ? A 117.088 -179.581 16.321 1 1 C ALA 0.870 1
ATOM 35 C C . ALA 6 6 ? A 118.379 -180.372 16.240 1 1 C ALA 0.870 1
ATOM 36 O O . ALA 6 6 ? A 118.360 -181.553 15.898 1 1 C ALA 0.870 1
ATOM 37 C CB . ALA 6 6 ? A 117.033 -178.595 15.133 1 1 C ALA 0.870 1
ATOM 38 N N . ALA 7 7 ? A 119.530 -179.754 16.611 1 1 C ALA 0.810 1
ATOM 39 C CA . ALA 7 7 ? A 120.829 -180.398 16.532 1 1 C ALA 0.810 1
ATOM 40 C C . ALA 7 7 ? A 120.881 -181.636 17.402 1 1 C ALA 0.810 1
ATOM 41 O O . ALA 7 7 ? A 121.330 -182.687 16.954 1 1 C ALA 0.810 1
ATOM 42 C CB . ALA 7 7 ? A 121.985 -179.445 16.926 1 1 C ALA 0.810 1
ATOM 43 N N . ARG 8 8 ? A 120.365 -181.572 18.636 1 1 C ARG 0.710 1
ATOM 44 C CA . ARG 8 8 ? A 120.284 -182.684 19.559 1 1 C ARG 0.710 1
ATOM 45 C C . ARG 8 8 ? A 119.427 -183.869 19.108 1 1 C ARG 0.710 1
ATOM 46 O O . ARG 8 8 ? A 119.834 -185.017 19.257 1 1 C ARG 0.710 1
ATOM 47 C CB . ARG 8 8 ? A 119.716 -182.132 20.876 1 1 C ARG 0.710 1
ATOM 48 C CG . ARG 8 8 ? A 119.699 -183.130 22.052 1 1 C ARG 0.710 1
ATOM 49 C CD . ARG 8 8 ? A 119.712 -182.471 23.438 1 1 C ARG 0.710 1
ATOM 50 N NE . ARG 8 8 ? A 118.746 -181.322 23.374 1 1 C ARG 0.710 1
ATOM 51 C CZ . ARG 8 8 ? A 118.932 -180.128 23.951 1 1 C ARG 0.710 1
ATOM 52 N NH1 . ARG 8 8 ? A 119.937 -179.914 24.792 1 1 C ARG 0.710 1
ATOM 53 N NH2 . ARG 8 8 ? A 118.096 -179.124 23.694 1 1 C ARG 0.710 1
ATOM 54 N N . ASN 9 9 ? A 118.235 -183.612 18.522 1 1 C ASN 0.830 1
ATOM 55 C CA . ASN 9 9 ? A 117.337 -184.610 17.946 1 1 C ASN 0.830 1
ATOM 56 C C . ASN 9 9 ? A 117.993 -185.378 16.802 1 1 C ASN 0.830 1
ATOM 57 O O . ASN 9 9 ? A 117.994 -186.605 16.769 1 1 C ASN 0.830 1
ATOM 58 C CB . ASN 9 9 ? A 116.064 -183.865 17.412 1 1 C ASN 0.830 1
ATOM 59 C CG . ASN 9 9 ? A 115.113 -184.704 16.550 1 1 C ASN 0.830 1
ATOM 60 O OD1 . ASN 9 9 ? A 115.325 -184.864 15.344 1 1 C ASN 0.830 1
ATOM 61 N ND2 . ASN 9 9 ? A 114.035 -185.254 17.138 1 1 C ASN 0.830 1
ATOM 62 N N . ILE 10 10 ? A 118.608 -184.667 15.839 1 1 C ILE 0.800 1
ATOM 63 C CA . ILE 10 10 ? A 119.204 -185.300 14.677 1 1 C ILE 0.800 1
ATOM 64 C C . ILE 10 10 ? A 120.519 -185.980 15.033 1 1 C ILE 0.800 1
ATOM 65 O O . ILE 10 10 ? A 120.933 -186.950 14.407 1 1 C ILE 0.800 1
ATOM 66 C CB . ILE 10 10 ? A 119.368 -184.328 13.508 1 1 C ILE 0.800 1
ATOM 67 C CG1 . ILE 10 10 ? A 120.419 -183.231 13.817 1 1 C ILE 0.800 1
ATOM 68 C CG2 . ILE 10 10 ? A 117.965 -183.772 13.156 1 1 C ILE 0.800 1
ATOM 69 C CD1 . ILE 10 10 ? A 120.563 -182.134 12.758 1 1 C ILE 0.800 1
ATOM 70 N N . LEU 11 11 ? A 121.186 -185.518 16.113 1 1 C LEU 0.800 1
ATOM 71 C CA . LEU 11 11 ? A 122.344 -186.168 16.691 1 1 C LEU 0.800 1
ATOM 72 C C . LEU 11 11 ? A 122.024 -187.545 17.232 1 1 C LEU 0.800 1
ATOM 73 O O . LEU 11 11 ? A 122.705 -188.519 16.913 1 1 C LEU 0.800 1
ATOM 74 C CB . LEU 11 11 ? A 122.895 -185.334 17.867 1 1 C LEU 0.800 1
ATOM 75 C CG . LEU 11 11 ? A 124.414 -185.235 17.917 1 1 C LEU 0.800 1
ATOM 76 C CD1 . LEU 11 11 ? A 124.940 -184.230 16.878 1 1 C LEU 0.800 1
ATOM 77 C CD2 . LEU 11 11 ? A 124.764 -184.857 19.358 1 1 C LEU 0.800 1
ATOM 78 N N . GLU 12 12 ? A 120.928 -187.645 18.017 1 1 C GLU 0.760 1
ATOM 79 C CA . GLU 12 12 ? A 120.394 -188.878 18.569 1 1 C GLU 0.760 1
ATOM 80 C C . GLU 12 12 ? A 119.941 -189.832 17.483 1 1 C GLU 0.760 1
ATOM 81 O O . GLU 12 12 ? A 120.289 -191.013 17.493 1 1 C GLU 0.760 1
ATOM 82 C CB . GLU 12 12 ? A 119.188 -188.587 19.498 1 1 C GLU 0.760 1
ATOM 83 C CG . GLU 12 12 ? A 118.497 -189.858 20.059 1 1 C GLU 0.760 1
ATOM 84 C CD . GLU 12 12 ? A 117.280 -189.549 20.929 1 1 C GLU 0.760 1
ATOM 85 O OE1 . GLU 12 12 ? A 116.562 -190.526 21.265 1 1 C GLU 0.760 1
ATOM 86 O OE2 . GLU 12 12 ? A 117.049 -188.356 21.254 1 1 C GLU 0.760 1
ATOM 87 N N . LYS 13 13 ? A 119.213 -189.316 16.470 1 1 C LYS 0.820 1
ATOM 88 C CA . LYS 13 13 ? A 118.697 -190.081 15.348 1 1 C LYS 0.820 1
ATOM 89 C C . LYS 13 13 ? A 119.774 -190.791 14.548 1 1 C LYS 0.820 1
ATOM 90 O O . LYS 13 13 ? A 119.598 -191.919 14.090 1 1 C LYS 0.820 1
ATOM 91 C CB . LYS 13 13 ? A 117.924 -189.150 14.378 1 1 C LYS 0.820 1
ATOM 92 C CG . LYS 13 13 ? A 117.329 -189.885 13.163 1 1 C LYS 0.820 1
ATOM 93 C CD . LYS 13 13 ? A 116.526 -188.968 12.235 1 1 C LYS 0.820 1
ATOM 94 C CE . LYS 13 13 ? A 115.996 -189.719 11.012 1 1 C LYS 0.820 1
ATOM 95 N NZ . LYS 13 13 ? A 115.206 -188.801 10.164 1 1 C LYS 0.820 1
ATOM 96 N N . HIS 14 14 ? A 120.918 -190.120 14.354 1 1 C HIS 0.780 1
ATOM 97 C CA . HIS 14 14 ? A 121.998 -190.643 13.558 1 1 C HIS 0.780 1
ATOM 98 C C . HIS 14 14 ? A 123.091 -191.256 14.430 1 1 C HIS 0.780 1
ATOM 99 O O . HIS 14 14 ? A 124.059 -191.798 13.906 1 1 C HIS 0.780 1
ATOM 100 C CB . HIS 14 14 ? A 122.566 -189.502 12.684 1 1 C HIS 0.780 1
ATOM 101 C CG . HIS 14 14 ? A 121.689 -189.106 11.535 1 1 C HIS 0.780 1
ATOM 102 N ND1 . HIS 14 14 ? A 120.391 -188.676 11.716 1 1 C HIS 0.780 1
ATOM 103 C CD2 . HIS 14 14 ? A 121.998 -189.108 10.209 1 1 C HIS 0.780 1
ATOM 104 C CE1 . HIS 14 14 ? A 119.933 -188.427 10.512 1 1 C HIS 0.780 1
ATOM 105 N NE2 . HIS 14 14 ? A 120.864 -188.673 9.566 1 1 C HIS 0.780 1
ATOM 106 N N . SER 15 15 ? A 122.948 -191.201 15.773 1 1 C SER 0.810 1
ATOM 107 C CA . SER 15 15 ? A 123.818 -191.822 16.775 1 1 C SER 0.810 1
ATOM 108 C C . SER 15 15 ? A 125.166 -191.132 16.956 1 1 C SER 0.810 1
ATOM 109 O O . SER 15 15 ? A 126.137 -191.773 17.339 1 1 C SER 0.810 1
ATOM 110 C CB . SER 15 15 ? A 124.097 -193.337 16.568 1 1 C SER 0.810 1
ATOM 111 O OG . SER 15 15 ? A 122.892 -194.088 16.434 1 1 C SER 0.810 1
ATOM 112 N N . LEU 16 16 ? A 125.270 -189.810 16.696 1 1 C LEU 0.800 1
ATOM 113 C CA . LEU 16 16 ? A 126.510 -189.038 16.790 1 1 C LEU 0.800 1
ATOM 114 C C . LEU 16 16 ? A 126.588 -188.380 18.150 1 1 C LEU 0.800 1
ATOM 115 O O . LEU 16 16 ? A 125.581 -188.150 18.810 1 1 C LEU 0.800 1
ATOM 116 C CB . LEU 16 16 ? A 126.688 -187.898 15.723 1 1 C LEU 0.800 1
ATOM 117 C CG . LEU 16 16 ? A 126.979 -188.325 14.263 1 1 C LEU 0.800 1
ATOM 118 C CD1 . LEU 16 16 ? A 128.108 -189.356 14.126 1 1 C LEU 0.800 1
ATOM 119 C CD2 . LEU 16 16 ? A 125.720 -188.836 13.573 1 1 C LEU 0.800 1
ATOM 120 N N . ASP 17 17 ? A 127.807 -188.019 18.586 1 1 C ASP 0.760 1
ATOM 121 C CA . ASP 17 17 ? A 128.010 -187.464 19.906 1 1 C ASP 0.760 1
ATOM 122 C C . ASP 17 17 ? A 128.147 -185.937 19.947 1 1 C ASP 0.760 1
ATOM 123 O O . ASP 17 17 ? A 128.039 -185.325 21.010 1 1 C ASP 0.760 1
ATOM 124 C CB . ASP 17 17 ? A 129.303 -188.077 20.483 1 1 C ASP 0.760 1
ATOM 125 C CG . ASP 17 17 ? A 129.016 -189.444 21.078 1 1 C ASP 0.760 1
ATOM 126 O OD1 . ASP 17 17 ? A 128.920 -190.427 20.305 1 1 C ASP 0.760 1
ATOM 127 O OD2 . ASP 17 17 ? A 128.900 -189.501 22.330 1 1 C ASP 0.760 1
ATOM 128 N N . ALA 18 18 ? A 128.398 -185.251 18.807 1 1 C ALA 0.770 1
ATOM 129 C CA . ALA 18 18 ? A 128.716 -183.816 18.714 1 1 C ALA 0.770 1
ATOM 130 C C . ALA 18 18 ? A 130.074 -183.428 19.315 1 1 C ALA 0.770 1
ATOM 131 O O . ALA 18 18 ? A 130.699 -182.470 18.872 1 1 C ALA 0.770 1
ATOM 132 C CB . ALA 18 18 ? A 127.637 -182.841 19.262 1 1 C ALA 0.770 1
ATOM 133 N N . SER 19 19 ? A 130.622 -184.222 20.261 1 1 C SER 0.750 1
ATOM 134 C CA . SER 19 19 ? A 131.936 -184.128 20.910 1 1 C SER 0.750 1
ATOM 135 C C . SER 19 19 ? A 133.088 -184.579 20.009 1 1 C SER 0.750 1
ATOM 136 O O . SER 19 19 ? A 134.126 -185.070 20.440 1 1 C SER 0.750 1
ATOM 137 C CB . SER 19 19 ? A 131.933 -184.954 22.233 1 1 C SER 0.750 1
ATOM 138 O OG . SER 19 19 ? A 131.691 -186.335 21.970 1 1 C SER 0.750 1
ATOM 139 N N . GLN 20 20 ? A 132.891 -184.343 18.704 1 1 C GLN 0.710 1
ATOM 140 C CA . GLN 20 20 ? A 133.701 -184.734 17.577 1 1 C GLN 0.710 1
ATOM 141 C C . GLN 20 20 ? A 133.431 -183.813 16.388 1 1 C GLN 0.710 1
ATOM 142 O O . GLN 20 20 ? A 134.090 -183.912 15.355 1 1 C GLN 0.710 1
ATOM 143 C CB . GLN 20 20 ? A 133.322 -186.181 17.139 1 1 C GLN 0.710 1
ATOM 144 C CG . GLN 20 20 ? A 131.889 -186.312 16.550 1 1 C GLN 0.710 1
ATOM 145 C CD . GLN 20 20 ? A 131.506 -187.732 16.145 1 1 C GLN 0.710 1
ATOM 146 O OE1 . GLN 20 20 ? A 130.483 -188.258 16.602 1 1 C GLN 0.710 1
ATOM 147 N NE2 . GLN 20 20 ? A 132.285 -188.338 15.227 1 1 C GLN 0.710 1
ATOM 148 N N . GLY 21 21 ? A 132.445 -182.889 16.498 1 1 C GLY 0.770 1
ATOM 149 C CA . GLY 21 21 ? A 132.132 -181.884 15.494 1 1 C GLY 0.770 1
ATOM 150 C C . GLY 21 21 ? A 132.508 -180.545 16.051 1 1 C GLY 0.770 1
ATOM 151 O O . GLY 21 21 ? A 133.177 -180.443 17.073 1 1 C GLY 0.770 1
ATOM 152 N N . THR 22 22 ? A 132.073 -179.461 15.393 1 1 C THR 0.740 1
ATOM 153 C CA . THR 22 22 ? A 132.456 -178.110 15.764 1 1 C THR 0.740 1
ATOM 154 C C . THR 22 22 ? A 131.214 -177.304 16.076 1 1 C THR 0.740 1
ATOM 155 O O . THR 22 22 ? A 130.148 -177.512 15.505 1 1 C THR 0.740 1
ATOM 156 C CB . THR 22 22 ? A 133.295 -177.403 14.697 1 1 C THR 0.740 1
ATOM 157 O OG1 . THR 22 22 ? A 132.653 -177.363 13.432 1 1 C THR 0.740 1
ATOM 158 C CG2 . THR 22 22 ? A 134.594 -178.193 14.490 1 1 C THR 0.740 1
ATOM 159 N N . ALA 23 23 ? A 131.312 -176.361 17.034 1 1 C ALA 0.710 1
ATOM 160 C CA . ALA 23 23 ? A 130.218 -175.483 17.380 1 1 C ALA 0.710 1
ATOM 161 C C . ALA 23 23 ? A 130.519 -174.105 16.804 1 1 C ALA 0.710 1
ATOM 162 O O . ALA 23 23 ? A 131.415 -173.408 17.265 1 1 C ALA 0.710 1
ATOM 163 C CB . ALA 23 23 ? A 130.072 -175.413 18.918 1 1 C ALA 0.710 1
ATOM 164 N N . THR 24 24 ? A 129.793 -173.706 15.739 1 1 C THR 0.690 1
ATOM 165 C CA . THR 24 24 ? A 129.981 -172.422 15.065 1 1 C THR 0.690 1
ATOM 166 C C . THR 24 24 ? A 128.771 -171.519 15.185 1 1 C THR 0.690 1
ATOM 167 O O . THR 24 24 ? A 128.756 -170.415 14.640 1 1 C THR 0.690 1
ATOM 168 C CB . THR 24 24 ? A 130.213 -172.608 13.569 1 1 C THR 0.690 1
ATOM 169 O OG1 . THR 24 24 ? A 129.177 -173.376 12.967 1 1 C THR 0.690 1
ATOM 170 C CG2 . THR 24 24 ? A 131.505 -173.401 13.346 1 1 C THR 0.690 1
ATOM 171 N N . GLY 25 25 ? A 127.708 -171.970 15.883 1 1 C GLY 0.610 1
ATOM 172 C CA . GLY 25 25 ? A 126.499 -171.186 16.110 1 1 C GLY 0.610 1
ATOM 173 C C . GLY 25 25 ? A 126.698 -169.943 16.958 1 1 C GLY 0.610 1
ATOM 174 O O . GLY 25 25 ? A 127.786 -169.698 17.474 1 1 C GLY 0.610 1
ATOM 175 N N . PRO 26 26 ? A 125.673 -169.125 17.132 1 1 C PRO 0.750 1
ATOM 176 C CA . PRO 26 26 ? A 125.720 -167.979 18.034 1 1 C PRO 0.750 1
ATOM 177 C C . PRO 26 26 ? A 126.097 -168.202 19.493 1 1 C PRO 0.750 1
ATOM 178 O O . PRO 26 26 ? A 125.277 -168.764 20.220 1 1 C PRO 0.750 1
ATOM 179 C CB . PRO 26 26 ? A 124.296 -167.407 17.935 1 1 C PRO 0.750 1
ATOM 180 C CG . PRO 26 26 ? A 123.837 -167.770 16.522 1 1 C PRO 0.750 1
ATOM 181 C CD . PRO 26 26 ? A 124.436 -169.165 16.350 1 1 C PRO 0.750 1
ATOM 182 N N . ARG 27 27 ? A 127.236 -167.636 19.917 1 1 C ARG 0.500 1
ATOM 183 C CA . ARG 27 27 ? A 127.863 -167.625 21.235 1 1 C ARG 0.500 1
ATOM 184 C C . ARG 27 27 ? A 127.948 -168.879 22.174 1 1 C ARG 0.500 1
ATOM 185 O O . ARG 27 27 ? A 127.617 -170.026 21.792 1 1 C ARG 0.500 1
ATOM 186 C CB . ARG 27 27 ? A 127.470 -166.342 22.024 1 1 C ARG 0.500 1
ATOM 187 C CG . ARG 27 27 ? A 128.655 -165.367 22.217 1 1 C ARG 0.500 1
ATOM 188 C CD . ARG 27 27 ? A 129.094 -164.607 20.954 1 1 C ARG 0.500 1
ATOM 189 N NE . ARG 27 27 ? A 130.578 -164.313 21.014 1 1 C ARG 0.500 1
ATOM 190 C CZ . ARG 27 27 ? A 131.191 -163.449 21.837 1 1 C ARG 0.500 1
ATOM 191 N NH1 . ARG 27 27 ? A 130.524 -162.746 22.742 1 1 C ARG 0.500 1
ATOM 192 N NH2 . ARG 27 27 ? A 132.515 -163.305 21.768 1 1 C ARG 0.500 1
ATOM 193 O OXT . ARG 27 27 ? A 128.443 -168.678 23.321 1 1 C ARG 0.500 1
#
#
loop_
_atom_type.symbol
C
N
O
#
#
loop_
_ma_qa_metric.id
_ma_qa_metric.name
_ma_qa_metric.description
_ma_qa_metric.type
_ma_qa_metric.mode
_ma_qa_metric.type_other_details
_ma_qa_metric.software_group_id
1 QMEANDisCo 'Predicted accuracy according to all-atom lDDT in [0,1].'
'pLDDT all-atom in [0,1]' local . 5
2 QMEANDisCo 'Predicted accuracy according to all-atom lDDT in [0,1].'
'pLDDT all-atom in [0,1]' global . 5
3 GMQE
'Global Model Quality Estimate of the model accuracy, calculated by SWISS-MODEL.'
'normalized score' global . 6
#
#
loop_
_ma_qa_metric_global.ordinal_id
_ma_qa_metric_global.model_id
_ma_qa_metric_global.metric_id
_ma_qa_metric_global.metric_value
1 1 2 0.757
2 1 3 0.845
#
#
loop_
_ma_qa_metric_local.ordinal_id
_ma_qa_metric_local.model_id
_ma_qa_metric_local.label_asym_id
_ma_qa_metric_local.label_seq_id
_ma_qa_metric_local.label_comp_id
_ma_qa_metric_local.metric_id
_ma_qa_metric_local.metric_value
1 1 A 2 ARG 1 0.730
2 1 A 3 LEU 1 0.820
3 1 A 4 SER 1 0.770
4 1 A 5 PRO 1 0.820
5 1 A 6 ALA 1 0.870
6 1 A 7 ALA 1 0.810
7 1 A 8 ARG 1 0.710
8 1 A 9 ASN 1 0.830
9 1 A 10 ILE 1 0.800
10 1 A 11 LEU 1 0.800
11 1 A 12 GLU 1 0.760
12 1 A 13 LYS 1 0.820
13 1 A 14 HIS 1 0.780
14 1 A 15 SER 1 0.810
15 1 A 16 LEU 1 0.800
16 1 A 17 ASP 1 0.760
17 1 A 18 ALA 1 0.770
18 1 A 19 SER 1 0.750
19 1 A 20 GLN 1 0.710
20 1 A 21 GLY 1 0.770
21 1 A 22 THR 1 0.740
22 1 A 23 ALA 1 0.710
23 1 A 24 THR 1 0.690
24 1 A 25 GLY 1 0.610
25 1 A 26 PRO 1 0.750
26 1 A 27 ARG 1 0.500
#
#
loop_
_pdbx_data_usage.id
_pdbx_data_usage.type
_pdbx_data_usage.details
_pdbx_data_usage.url
1 license
;This SWISS-MODEL protein model is copyright.
It is produced by the SWISS-MODEL server, developed by the Computational
Structural Biology Group at the SIB Swiss Institute of Bioinformatics at the
Biozentrum, University of Basel (https://swissmodel.expasy.org). This
model is licensed under the CC BY-SA 4.0 Creative Commons
Attribution-ShareAlike 4.0 International License
(https://creativecommons.org/licenses/by-sa/4.0/legalcode), i.e. you
can copy and redistribute the model in any medium or format,
transform and build upon the model for any purpose, even
commercially, under the following terms:
Attribution - You must give appropriate credit, provide a link to
the license, and indicate if changes were made. You may do so in any
reasonable manner, but not in any way that suggests the licensor
endorses you or your use. When you publish, patent or distribute
results that were fully or partially based on the model, please cite
the corresponding papers mentioned under JRNL.
ShareAlike - If you remix, transform, or build upon the material,
you must distribute your contributions under the same license as the
original.
No additional restrictions - you may not apply legal terms or
technological measures that legally restrict others from doing
anything the license permits.
Find a human-readable summary of (and not a substitute for) the
CC BY-SA 4.0 license at this link:
https://creativecommons.org/licenses/by-sa/4.0/
;
https://creativecommons.org/licenses/by-sa/4.0/legalcode
2 disclaimer
;The SWISS-MODEL SERVER produces theoretical models for
proteins. The results of any theoretical modelling procedure is
NON-EXPERIMENTAL and MUST be considered with care. These models may
contain significant errors. This is especially true for automated
modeling since there is no human intervention during model
building. Please read the header section and the logfile carefully
to know what templates and alignments were used during the model
building process. All information by the SWISS-MODEL SERVER is
provided "AS-IS", without any warranty, expressed or implied.
;
https://swissmodel.expasy.org/docs/terms_of_use#disclaimer
#