data_SMR-821c2caaddb392494681a9899cc24043_1
_entry.id SMR-821c2caaddb392494681a9899cc24043_1
_struct.entry_id SMR-821c2caaddb392494681a9899cc24043_1
_struct.pdbx_model_details
;This model was generated unsupervised by the SWISS-MODEL homology-modelling pipeline for the SWISS-MODEL Repository, a database of annotated 3D protein structure models. The modelled monomer covers following UniProtKB entries:

  - P83249/ TOP2B_OXYTA, M-oxotoxin-Ot2b

Estimated model accuracy of this model is 0.518, calculated by SWISS-MODEL as Global Model Quality Estimate (GMQE).
;
_struct.pdbx_structure_determination_methodology computational
_struct.title 'Model for UniProtKB entries P83249'
_audit_conform.dict_location https://raw.githubusercontent.com/ihmwg/ModelCIF/80e1e22/dist/mmcif_ma.dic
_audit_conform.dict_name mmcif_ma.dic
_audit_conform.dict_version 1.4.7
#
loop_
_citation.id
_citation.title
_citation.journal_abbrev
_citation.journal_volume
_citation.page_first
_citation.page_last
_citation.year
_citation.pdbx_database_id_PubMed
_citation.pdbx_database_id_DOI
primary 'The SWISS-MODEL Repository - new features and functionality'
'Nucleic Acids Res.' 45 D313 D319 2017 27899672 10.1093/nar/gkw1132
2 'SWISS-MODEL: homology modelling of protein structures and complexes'
'Nucleic Acids Res.' 46 W296 W303 2018 29788355 10.1093/nar/gky427
3 'ProMod3 - A versatile homology modelling toolbox' 'PLoS Comput. Biol.' 17(1)
1 18 2021 33507980 10.1371/journal.pcbi.1008667
4 'QMEANDisCo - distance constraints applied on model quality estimation'
Bioinformatics 36 1765 1771 2020 31697312 10.1093/bioinformatics/btz828
5
'OpenStructure: an integrated software framework for computational structural biology'
'Acta Crystallogr., Sect. D: Biol. Crystallogr.' 69 701 709 2013 23633579
10.1107/S0907444913007051
6 'BLAST+: architecture and applications' 'BMC Bioinf.' 10 421 . 2009 20003500
10.1186/1471-2105-10-421
7 'HH-suite3 for fast remote homology detection and deep protein annotation'
'BMC Bioinf.' 20 473 . 2019 31521110 10.1186/s12859-019-3019-7
#
#
loop_
_citation_author.citation_id
_citation_author.name
_citation_author.ordinal
primary 'Bienert, S.' 1
primary 'Waterhouse, A.' 2
primary 'de Beer, T.A.P.' 3
primary 'Tauriello, G.' 4
primary 'Studer, G.' 5
primary 'Bordoli, L.' 6
primary 'Schwede, T.' 7
2 'Waterhouse, A.' 8
2 'Bertoni, M.' 9
2 'Bienert, S.' 10
2 'Studer, G.' 11
2 'Tauriello, G.' 12
2 'Gumienny, R.' 13
2 'Heer, F.T.' 14
2 'de Beer, T.A.P.' 15
2 'Rempfer, C.' 16
2 'Bordoli, L.' 17
2 'Lepore, R.' 18
2 'Schwede, T.' 19
3 'Studer, G.' 20
3 'Tauriello, G.' 21
3 'Bienert, S.' 22
3 'Biasini, M.' 23
3 'Johner, N.' 24
3 'Schwede, T.' 25
4 'Studer, G.' 26
4 'Rempfer, C.' 27
4 'Waterhouse, A.M.' 28
4 'Gumienny, R.' 29
4 'Haas, J.' 30
4 'Schwede, T.' 31
5 'Biasini, M.' 32
5 'Schmidt, T.' 33
5 'Bienert, S.' 34
5 'Mariani, V.' 35
5 'Studer, G.' 36
5 'Haas, J.' 37
5 'Johner, N.' 38
5 'Schenk, A.D.' 39
5 'Philippsen, A.' 40
5 'Schwede, T.' 41
6 'Camacho, C.' 42
6 'Coulouris, G.' 43
6 'Avagyan, V.' 44
6 'Ma, N.' 45
6 'Papadopoulos, J.' 46
6 'Bealer, K.' 47
6 'Madden, T.L.' 48
7 'Steinegger, M.' 49
7 'Meier, M.' 50
7 'Mirdita, M.' 51
7 'Vohringer, H.' 52
7 'Haunsberger, S.J.' 53
7 'Soding, J.' 54
#
#
loop_
_software.pdbx_ordinal
_software.name
_software.classification
_software.description
_software.version
_software.type
_software.location
_software.citation_id
1 SWISS-MODEL 'model building' 'Homology modelling web service' 2025-06.3
package https://swissmodel.expasy.org 2
2 ProMod3 'model building' 'Modular homology modelling engine' 3.5.0 library
https://git.scicore.unibas.ch/schwede/ProMod3 3
3 QMEAN 'model building' 'QMEAN - Qualitative Model Energy ANalysis' 4.4.0
library https://git.scicore.unibas.ch/schwede/QMEAN 4
4 OpenStructure 'data processing'
'Open-Source Computational Structural Biology Framework' 2.10.0 package
https://openstructure.org/ 5
5 BLAST 'data collection' . 2.14.1 package https://blast.ncbi.nlm.nih.gov 6
6 HH-suite 'data collection' 'HH-suite3 for sensitive sequence searching' 3.2.0
package https://github.com/soedinglab/hh-suite 7
#
#
loop_
_ma_software_group.ordinal_id
_ma_software_group.group_id
_ma_software_group.software_id
_ma_software_group.parameter_group_id
1 1 6 .
2 2 1 .
3 2 4 .
4 2 5 .
5 2 6 .
6 3 1 .
7 3 4 .
8 4 1 .
9 4 2 .
10 4 4 .
11 5 3 .
12 6 1 .
13 6 3 .
14 6 4 .
#
#
loop_
_audit_author.name
_audit_author.pdbx_ordinal
'Bienert, S.' 1
'Waterhouse, A.' 2
'de Beer, T.A.P.' 3
'Tauriello, G.' 4
'Studer, G.' 5
'Bordoli, L.' 6
'Schwede, T.' 7
#
#
loop_
_chem_comp.id
_chem_comp.type
_chem_comp.name
_chem_comp.formula
_chem_comp.formula_weight
_chem_comp.ma_provenance
ALA 'L-peptide linking' ALANINE 'C3 H7 N O2' 89.094 'CCD Core'
ARG 'L-peptide linking' ARGININE 'C6 H15 N4 O2 1' 175.212 'CCD Core'
ASN 'L-peptide linking' ASPARAGINE 'C4 H8 N2 O3' 132.119 'CCD Core'
ASP 'L-peptide linking' 'ASPARTIC ACID' 'C4 H7 N O4' 133.103 'CCD Core'
CYS 'L-peptide linking' CYSTEINE 'C3 H7 N O2 S' 121.154 'CCD Core'
GLN 'L-peptide linking' GLUTAMINE 'C5 H10 N2 O3' 146.146 'CCD Core'
GLU 'L-peptide linking' 'GLUTAMIC ACID' 'C5 H9 N O4' 147.130 'CCD Core'
GLY 'peptide linking' GLYCINE 'C2 H5 N O2' 75.067 'CCD Core'
HIS 'L-peptide linking' HISTIDINE 'C6 H10 N3 O2 1' 156.165 'CCD Core'
ILE 'L-peptide linking' ISOLEUCINE 'C6 H13 N O2' 131.175 'CCD Core'
LEU 'L-peptide linking' LEUCINE 'C6 H13 N O2' 131.175 'CCD Core'
LYS 'L-peptide linking' LYSINE 'C6 H15 N2 O2 1' 147.198 'CCD Core'
MET 'L-peptide linking' METHIONINE 'C5 H11 N O2 S' 149.208 'CCD Core'
PHE 'L-peptide linking' PHENYLALANINE 'C9 H11 N O2' 165.192 'CCD Core'
PRO 'L-peptide linking' PROLINE 'C5 H9 N O2' 115.132 'CCD Core'
SER 'L-peptide linking' SERINE 'C3 H7 N O3' 105.093 'CCD Core'
THR 'L-peptide linking' THREONINE 'C4 H9 N O3' 119.120 'CCD Core'
TYR 'L-peptide linking' TYROSINE 'C9 H11 N O3' 181.191 'CCD Core'
VAL 'L-peptide linking' VALINE 'C5 H11 N O2' 117.148 'CCD Core'
#
#
loop_
_entity.id
_entity.type
_entity.src_method
_entity.pdbx_description
_entity.formula_weight
_entity.pdbx_number_of_molecules
_entity.details
1 polymer man . 4805.526 1 .
#
#
loop_
_struct_ref.id
_struct_ref.entity_id
_struct_ref.db_name
_struct_ref.db_code
_struct_ref.pdbx_db_accession
_struct_ref.pdbx_align_begin
_struct_ref.pdbx_seq_one_letter_code
_struct_ref.details
1 1 UNP TOP2B_OXYTA P83249 1 GKFSGFAKILKSIAKFFKGVGKVRKQFKEASDLDKNQ
M-oxotoxin-Ot2b
#
#
loop_
_struct_ref_seq.align_id
_struct_ref_seq.ref_id
_struct_ref_seq.seq_align_beg
_struct_ref_seq.seq_align_end
_struct_ref_seq.db_align_beg
_struct_ref_seq.db_align_end
1 1 1 37 1 37
#
#
loop_
_ma_target_ref_db_details.target_entity_id
_ma_target_ref_db_details.db_name
_ma_target_ref_db_details.db_name_other_details
_ma_target_ref_db_details.db_code
_ma_target_ref_db_details.db_accession
_ma_target_ref_db_details.seq_db_isoform
_ma_target_ref_db_details.seq_db_align_begin
_ma_target_ref_db_details.seq_db_align_end
_ma_target_ref_db_details.ncbi_taxonomy_id
_ma_target_ref_db_details.organism_scientific
_ma_target_ref_db_details.seq_db_sequence_version_date
_ma_target_ref_db_details.seq_db_sequence_checksum
_ma_target_ref_db_details.is_primary
1 UNP . TOP2B_OXYTA P83249 . 1 37 666126
'Oxyopes takobius (Lynx spider) (Oxyopes foliiformis)' 2002-03-01
590B2ED8BE99A1EB .
#
#
loop_
_entity_poly.entity_id
_entity_poly.type
_entity_poly.nstd_linkage
_entity_poly.nstd_monomer
_entity_poly.pdbx_strand_id
_entity_poly.pdbx_seq_one_letter_code
_entity_poly.pdbx_seq_one_letter_code_can
1 polypeptide(L) no no A GKFSGFAKILKSIAKFFKGVGKVRKQFKEASDLDKNQ
GKFSGFAKILKSIAKFFKGVGKVRKQFKEASDLDKNQ
#
#
loop_
_entity_poly_seq.entity_id
_entity_poly_seq.num
_entity_poly_seq.mon_id
_entity_poly_seq.hetero
1 1 GLY .
1 2 LYS .
1 3 PHE .
1 4 SER .
1 5 GLY .
1 6 PHE .
1 7 ALA .
1 8 LYS .
1 9 ILE .
1 10 LEU .
1 11 LYS .
1 12 SER .
1 13 ILE .
1 14 ALA .
1 15 LYS .
1 16 PHE .
1 17 PHE .
1 18 LYS .
1 19 GLY .
1 20 VAL .
1 21 GLY .
1 22 LYS .
1 23 VAL .
1 24 ARG .
1 25 LYS .
1 26 GLN .
1 27 PHE .
1 28 LYS .
1 29 GLU .
1 30 ALA .
1 31 SER .
1 32 ASP .
1 33 LEU .
1 34 ASP .
1 35 LYS .
1 36 ASN .
1 37 GLN .
#
#
loop_
_struct_asym.id
_struct_asym.entity_id
_struct_asym.details
A 1 .
#
#
loop_
_pdbx_poly_seq_scheme.asym_id
_pdbx_poly_seq_scheme.entity_id
_pdbx_poly_seq_scheme.seq_id
_pdbx_poly_seq_scheme.mon_id
_pdbx_poly_seq_scheme.pdb_seq_num
_pdbx_poly_seq_scheme.auth_seq_num
_pdbx_poly_seq_scheme.pdb_mon_id
_pdbx_poly_seq_scheme.auth_mon_id
_pdbx_poly_seq_scheme.pdb_strand_id
_pdbx_poly_seq_scheme.pdb_ins_code
A 1 1 GLY 1 ? ? ? A .
A 1 2 LYS 2 ? ? ? A .
A 1 3 PHE 3 ? ? ? A .
A 1 4 SER 4 ? ? ? A .
A 1 5 GLY 5 ? ? ? A .
A 1 6 PHE 6 6 PHE PHE A .
A 1 7 ALA 7 7 ALA ALA A .
A 1 8 LYS 8 8 LYS LYS A .
A 1 9 ILE 9 9 ILE ILE A .
A 1 10 LEU 10 10 LEU LEU A .
A 1 11 LYS 11 11 LYS LYS A .
A 1 12 SER 12 12 SER SER A .
A 1 13 ILE 13 13 ILE ILE A .
A 1 14 ALA 14 14 ALA ALA A .
A 1 15 LYS 15 15 LYS LYS A .
A 1 16 PHE 16 16 PHE PHE A .
A 1 17 PHE 17 17 PHE PHE A .
A 1 18 LYS 18 18 LYS LYS A .
A 1 19 GLY 19 19 GLY GLY A .
A 1 20 VAL 20 20 VAL VAL A .
A 1 21 GLY 21 21 GLY GLY A .
A 1 22 LYS 22 22 LYS LYS A .
A 1 23 VAL 23 23 VAL VAL A .
A 1 24 ARG 24 24 ARG ARG A .
A 1 25 LYS 25 25 LYS LYS A .
A 1 26 GLN 26 26 GLN GLN A .
A 1 27 PHE 27 27 PHE PHE A .
A 1 28 LYS 28 28 LYS LYS A .
A 1 29 GLU 29 29 GLU GLU A .
A 1 30 ALA 30 30 ALA ALA A .
A 1 31 SER 31 ? ? ? A .
A 1 32 ASP 32 ? ? ? A .
A 1 33 LEU 33 ? ? ? A .
A 1 34 ASP 34 ? ? ? A .
A 1 35 LYS 35 ? ? ? A .
A 1 36 ASN 36 ? ? ? A .
A 1 37 GLN 37 ? ? ? A .
#
#
loop_
_ma_data.id
_ma_data.name
_ma_data.content_type
_ma_data.content_type_other_details
1
'GENERAL SECRETION PATHWAY PROTEIN F {PDB ID=2vma, label_asym_id=A, auth_asym_id=A, SMTL ID=2vma.1.A}'
'template structure' .
2 . target .
3 'Target-template alignment by HHblits to 2vma, label_asym_id=A'
'target-template alignment' .
4 'model 1' 'model coordinates' .
5 SMTL 'reference database' .
6 PDB 'reference database' .
7 'Template search output' other 'Results of the sequence search'
#
#
loop_
_ma_data_group.ordinal_id
_ma_data_group.group_id
_ma_data_group.data_id
1 1 2
2 1 5
3 1 6
4 2 7
5 3 2
6 3 1
7 3 3
8 4 1
9 4 3
10 5 4
#
#
loop_
_ma_data_ref_db.data_id
_ma_data_ref_db.name
_ma_data_ref_db.location_url
_ma_data_ref_db.version
_ma_data_ref_db.release_date
5 SMTL https://swissmodel.expasy.org/templates/ . 2025-06-25
6 PDB https://www.wwpdb.org . 2025-06-20
#
#
loop_
_ma_target_entity.entity_id
_ma_target_entity.data_id
_ma_target_entity.origin
1 2 'reference database'
#
#
loop_
_ma_target_entity_instance.asym_id
_ma_target_entity_instance.entity_id
_ma_target_entity_instance.details
A 1 .
#
#
loop_
_ma_template_trans_matrix.id
_ma_template_trans_matrix.rot_matrix[1][1]
_ma_template_trans_matrix.rot_matrix[2][1]
_ma_template_trans_matrix.rot_matrix[3][1]
_ma_template_trans_matrix.rot_matrix[1][2]
_ma_template_trans_matrix.rot_matrix[2][2]
_ma_template_trans_matrix.rot_matrix[3][2]
_ma_template_trans_matrix.rot_matrix[1][3]
_ma_template_trans_matrix.rot_matrix[2][3]
_ma_template_trans_matrix.rot_matrix[3][3]
_ma_template_trans_matrix.tr_vector[1]
_ma_template_trans_matrix.tr_vector[2]
_ma_template_trans_matrix.tr_vector[3]
1 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000
1.000000 0 0 0
#
#
loop_
_ma_template_details.ordinal_id
_ma_template_details.template_id
_ma_template_details.template_origin
_ma_template_details.template_entity_type
_ma_template_details.template_trans_matrix_id
_ma_template_details.template_data_id
_ma_template_details.target_asym_id
_ma_template_details.template_label_asym_id
_ma_template_details.template_label_entity_id
_ma_template_details.template_model_num
_ma_template_details.template_auth_asym_id
1 1 'reference database' polymer 1 1 A A 1 1 A
#
#
loop_
_ma_template_poly.template_id
_ma_template_poly.seq_one_letter_code
_ma_template_poly.seq_one_letter_code_can
1
;MGFAFKRGISTPDLALITRQLATLVQSGMPLEECLRAVAEQSEKPRIRTMLVAVRAKVTEGYTLSDSLGD
YPHVFDELFRSMVAAGEKSGHLDSVLERLADYAENRQKMRSKLQQASENLYPQ
;

;MGFAFKRGISTPDLALITRQLATLVQSGMPLEECLRAVAEQSEKPRIRTMLVAVRAKVTEGYTLSDSLGD
YPHVFDELFRSMVAAGEKSGHLDSVLERLADYAENRQKMRSKLQQASENLYPQ
;

#
#
loop_
_ma_template_poly_segment.id
_ma_template_poly_segment.template_id
_ma_template_poly_segment.residue_number_begin
_ma_template_poly_segment.residue_number_end
1 1 92 116
#
#
loop_
_ma_template_ref_db_details.template_id
_ma_template_ref_db_details.db_name
_ma_template_ref_db_details.db_name_other_details
_ma_template_ref_db_details.db_accession_code
_ma_template_ref_db_details.db_version_date
1 PDB . 2vma 2024-10-09
#
#
loop_
_ma_target_template_poly_mapping.id
_ma_target_template_poly_mapping.template_segment_id
_ma_target_template_poly_mapping.target_asym_id
_ma_target_template_poly_mapping.target_seq_id_begin
_ma_target_template_poly_mapping.target_seq_id_end
1 1 A 1 37
#
#
loop_
_ma_alignment_info.alignment_id
_ma_alignment_info.data_id
_ma_alignment_info.software_group_id
_ma_alignment_info.alignment_length
_ma_alignment_info.alignment_type
_ma_alignment_info.alignment_mode
1 3 1 37 'target-template pairwise alignment' local
#
#
loop_
_ma_alignment_details.ordinal_id
_ma_alignment_details.alignment_id
_ma_alignment_details.template_segment_id
_ma_alignment_details.target_asym_id
_ma_alignment_details.score_type
_ma_alignment_details.score_type_other_details
_ma_alignment_details.score_value
_ma_alignment_details.percent_sequence_identity
_ma_alignment_details.sequence_identity_denominator
_ma_alignment_details.sequence_identity_denominator_other_details
1 1 1 A 'HHblits e-value' . 15.000 20.000
'Number of aligned residue pairs (not including the gaps)' .
#
#
loop_
_ma_alignment.ordinal_id
_ma_alignment.alignment_id
_ma_alignment.target_template_flag
_ma_alignment.sequence
1 1 1 GKFSGFAKILKSIAKFFKGVGKVRKQFKEASDLDKNQ
2 1 2 -----LDSVLERLADYAENRQKMRSKLQQA-------
#
#
loop_
_ma_protocol_step.ordinal_id
_ma_protocol_step.protocol_id
_ma_protocol_step.step_id
_ma_protocol_step.method_type
_ma_protocol_step.step_name
_ma_protocol_step.details
_ma_protocol_step.software_group_id
_ma_protocol_step.input_data_group_id
_ma_protocol_step.output_data_group_id
1 1 1 'template search' 'template search' 'SWISS-MODEL template search in PDB' 2
1 2
2 1 2 'template selection' 'template selection'
'Automatic template selection by SWISS-MODEL' 3 2 4
3 1 3 modeling 'homology modeling'
'SWISS-MODEL auto-model mode using ProMod3 on 2vma.1' 4 3 5
#
#
loop_
_ma_model_list.ordinal_id
_ma_model_list.model_name
_ma_model_list.data_id
_ma_model_list.model_type
_ma_model_list.model_type_other_details
1 'model 1' 4 'Homology model' .
#
#
loop_
_ma_model_group.id
_ma_model_group.name
_ma_model_group.details
1 . .
#
#
loop_
_ma_model_group_link.group_id
_ma_model_group_link.model_id
1 1
#
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_alt_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.auth_seq_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.label_entity_id
_atom_site.auth_asym_id
_atom_site.auth_comp_id
_atom_site.B_iso_or_equiv
_atom_site.pdbx_PDB_model_num
ATOM 1 N N . PHE 6 6 ? A 34.835 21.355 55.893 1 1 A PHE 0.550 1
ATOM 2 C CA . PHE 6 6 ? A 33.602 21.613 55.053 1 1 A PHE 0.550 1
ATOM 3 C C . PHE 6 6 ? A 32.686 22.768 55.451 1 1 A PHE 0.550 1
ATOM 4 O O . PHE 6 6 ? A 32.429 23.628 54.620 1 1 A PHE 0.550 1
ATOM 5 C CB . PHE 6 6 ? A 32.799 20.307 54.843 1 1 A PHE 0.550 1
ATOM 6 C CG . PHE 6 6 ? A 33.599 19.322 54.037 1 1 A PHE 0.550 1
ATOM 7 C CD1 . PHE 6 6 ? A 33.836 19.565 52.674 1 1 A PHE 0.550 1
ATOM 8 C CD2 . PHE 6 6 ? A 34.115 18.154 54.621 1 1 A PHE 0.550 1
ATOM 9 C CE1 . PHE 6 6 ? A 34.575 18.658 51.908 1 1 A PHE 0.550 1
ATOM 10 C CE2 . PHE 6 6 ? A 34.854 17.244 53.854 1 1 A PHE 0.550 1
ATOM 11 C CZ . PHE 6 6 ? A 35.083 17.496 52.497 1 1 A PHE 0.550 1
ATOM 12 N N . ALA 7 7 ? A 32.221 22.866 56.720 1 1 A ALA 0.630 1
ATOM 13 C CA . ALA 7 7 ? A 31.342 23.935 57.190 1 1 A ALA 0.630 1
ATOM 14 C C . ALA 7 7 ? A 31.822 25.374 56.924 1 1 A ALA 0.630 1
ATOM 15 O O . ALA 7 7 ? A 31.076 26.222 56.446 1 1 A ALA 0.630 1
ATOM 16 C CB . ALA 7 7 ? A 31.182 23.712 58.707 1 1 A ALA 0.630 1
ATOM 17 N N . LYS 8 8 ? A 33.116 25.664 57.184 1 1 A LYS 0.560 1
ATOM 18 C CA . LYS 8 8 ? A 33.742 26.926 56.814 1 1 A LYS 0.560 1
ATOM 19 C C . LYS 8 8 ? A 33.816 27.215 55.313 1 1 A LYS 0.560 1
ATOM 20 O O . LYS 8 8 ? A 33.488 28.316 54.884 1 1 A LYS 0.560 1
ATOM 21 C CB . LYS 8 8 ? A 35.147 27.037 57.452 1 1 A LYS 0.560 1
ATOM 22 C CG . LYS 8 8 ? A 35.101 27.047 58.991 1 1 A LYS 0.560 1
ATOM 23 C CD . LYS 8 8 ? A 36.499 27.173 59.624 1 1 A LYS 0.560 1
ATOM 24 C CE . LYS 8 8 ? A 36.486 27.230 61.158 1 1 A LYS 0.560 1
ATOM 25 N NZ . LYS 8 8 ? A 37.871 27.305 61.684 1 1 A LYS 0.560 1
ATOM 26 N N . ILE 9 9 ? A 34.210 26.233 54.466 1 1 A ILE 0.560 1
ATOM 27 C CA . ILE 9 9 ? A 34.263 26.400 53.016 1 1 A ILE 0.560 1
ATOM 28 C C . ILE 9 9 ? A 32.876 26.675 52.433 1 1 A ILE 0.560 1
ATOM 29 O O . ILE 9 9 ? A 32.698 27.586 51.631 1 1 A ILE 0.560 1
ATOM 30 C CB . ILE 9 9 ? A 34.949 25.213 52.328 1 1 A ILE 0.560 1
ATOM 31 C CG1 . ILE 9 9 ? A 36.450 25.144 52.707 1 1 A ILE 0.560 1
ATOM 32 C CG2 . ILE 9 9 ? A 34.812 25.326 50.794 1 1 A ILE 0.560 1
ATOM 33 C CD1 . ILE 9 9 ? A 37.162 23.880 52.204 1 1 A ILE 0.560 1
ATOM 34 N N . LEU 10 10 ? A 31.834 25.938 52.874 1 1 A LEU 0.570 1
ATOM 35 C CA . LEU 10 10 ? A 30.461 26.184 52.454 1 1 A LEU 0.570 1
ATOM 36 C C . LEU 10 10 ? A 29.945 27.571 52.805 1 1 A LEU 0.570 1
ATOM 37 O O . LEU 10 10 ? A 29.274 28.213 52.001 1 1 A LEU 0.570 1
ATOM 38 C CB . LEU 10 10 ? A 29.494 25.117 53.006 1 1 A LEU 0.570 1
ATOM 39 C CG . LEU 10 10 ? A 29.657 23.717 52.383 1 1 A LEU 0.570 1
ATOM 40 C CD1 . LEU 10 10 ? A 28.725 22.727 53.091 1 1 A LEU 0.570 1
ATOM 41 C CD2 . LEU 10 10 ? A 29.353 23.701 50.877 1 1 A LEU 0.570 1
ATOM 42 N N . LYS 11 11 ? A 30.292 28.099 53.993 1 1 A LYS 0.620 1
ATOM 43 C CA . LYS 11 11 ? A 30.033 29.484 54.327 1 1 A LYS 0.620 1
ATOM 44 C C . LYS 11 11 ? A 30.730 30.493 53.406 1 1 A LYS 0.620 1
ATOM 45 O O . LYS 11 11 ? A 30.138 31.488 52.986 1 1 A LYS 0.620 1
ATOM 46 C CB . LYS 11 11 ? A 30.456 29.728 55.791 1 1 A LYS 0.620 1
ATOM 47 C CG . LYS 11 11 ? A 30.156 31.145 56.301 1 1 A LYS 0.620 1
ATOM 48 C CD . LYS 11 11 ? A 30.540 31.320 57.780 1 1 A LYS 0.620 1
ATOM 49 C CE . LYS 11 11 ? A 30.256 32.722 58.325 1 1 A LYS 0.620 1
ATOM 50 N NZ . LYS 11 11 ? A 30.610 32.831 59.762 1 1 A LYS 0.620 1
ATOM 51 N N . SER 12 12 ? A 32.010 30.258 53.058 1 1 A SER 0.650 1
ATOM 52 C CA . SER 12 12 ? A 32.760 31.057 52.090 1 1 A SER 0.650 1
ATOM 53 C C . SER 12 12 ? A 32.196 31.012 50.674 1 1 A SER 0.650 1
ATOM 54 O O . SER 12 12 ? A 32.084 32.041 50.009 1 1 A SER 0.650 1
ATOM 55 C CB . SER 12 12 ? A 34.252 30.658 52.040 1 1 A SER 0.650 1
ATOM 56 O OG . SER 12 12 ? A 34.897 30.999 53.269 1 1 A SER 0.650 1
ATOM 57 N N . ILE 13 13 ? A 31.789 29.815 50.195 1 1 A ILE 0.610 1
ATOM 58 C CA . ILE 13 13 ? A 31.090 29.597 48.927 1 1 A ILE 0.610 1
ATOM 59 C C . ILE 13 13 ? A 29.739 30.310 48.907 1 1 A ILE 0.610 1
ATOM 60 O O . ILE 13 13 ? A 29.425 31.017 47.953 1 1 A ILE 0.610 1
ATOM 61 C CB . ILE 13 13 ? A 30.946 28.101 48.588 1 1 A ILE 0.610 1
ATOM 62 C CG1 . ILE 13 13 ? A 32.333 27.495 48.253 1 1 A ILE 0.610 1
ATOM 63 C CG2 . ILE 13 13 ? A 29.966 27.859 47.413 1 1 A ILE 0.610 1
ATOM 64 C CD1 . ILE 13 13 ? A 32.348 25.965 48.117 1 1 A ILE 0.610 1
ATOM 65 N N . ALA 14 14 ? A 28.926 30.203 49.983 1 1 A ALA 0.690 1
ATOM 66 C CA . ALA 14 14 ? A 27.652 30.895 50.111 1 1 A ALA 0.690 1
ATOM 67 C C . ALA 14 14 ? A 27.747 32.421 50.043 1 1 A ALA 0.690 1
ATOM 68 O O . ALA 14 14 ? A 26.967 33.074 49.350 1 1 A ALA 0.690 1
ATOM 69 C CB . ALA 14 14 ? A 26.952 30.472 51.421 1 1 A ALA 0.690 1
ATOM 70 N N . LYS 15 15 ? A 28.741 33.028 50.727 1 1 A LYS 0.620 1
ATOM 71 C CA . LYS 15 15 ? A 29.043 34.447 50.614 1 1 A LYS 0.620 1
ATOM 72 C C . LYS 15 15 ? A 29.482 34.870 49.228 1 1 A LYS 0.620 1
ATOM 73 O O . LYS 15 15 ? A 29.029 35.888 48.702 1 1 A LYS 0.620 1
ATOM 74 C CB . LYS 15 15 ? A 30.167 34.847 51.586 1 1 A LYS 0.620 1
ATOM 75 C CG . LYS 15 15 ? A 29.734 34.818 53.051 1 1 A LYS 0.620 1
ATOM 76 C CD . LYS 15 15 ? A 30.893 35.248 53.950 1 1 A LYS 0.620 1
ATOM 77 C CE . LYS 15 15 ? A 30.514 35.282 55.420 1 1 A LYS 0.620 1
ATOM 78 N NZ . LYS 15 15 ? A 31.706 35.693 56.187 1 1 A LYS 0.620 1
ATOM 79 N N . PHE 16 16 ? A 30.365 34.069 48.601 1 1 A PHE 0.610 1
ATOM 80 C CA . PHE 16 16 ? A 30.803 34.273 47.239 1 1 A PHE 0.610 1
ATOM 81 C C . PHE 16 16 ? A 29.636 34.231 46.256 1 1 A PHE 0.610 1
ATOM 82 O O . PHE 16 16 ? A 29.397 35.193 45.538 1 1 A PHE 0.610 1
ATOM 83 C CB . PHE 16 16 ? A 31.872 33.196 46.907 1 1 A PHE 0.610 1
ATOM 84 C CG . PHE 16 16 ? A 32.416 33.299 45.510 1 1 A PHE 0.610 1
ATOM 85 C CD1 . PHE 16 16 ? A 31.941 32.441 44.505 1 1 A PHE 0.610 1
ATOM 86 C CD2 . PHE 16 16 ? A 33.389 34.256 45.186 1 1 A PHE 0.610 1
ATOM 87 C CE1 . PHE 16 16 ? A 32.423 32.544 43.195 1 1 A PHE 0.610 1
ATOM 88 C CE2 . PHE 16 16 ? A 33.873 34.359 43.875 1 1 A PHE 0.610 1
ATOM 89 C CZ . PHE 16 16 ? A 33.390 33.503 42.880 1 1 A PHE 0.610 1
ATOM 90 N N . PHE 17 17 ? A 28.821 33.156 46.270 1 1 A PHE 0.620 1
ATOM 91 C CA . PHE 17 17 ? A 27.678 32.982 45.386 1 1 A PHE 0.620 1
ATOM 92 C C . PHE 17 17 ? A 26.634 34.092 45.520 1 1 A PHE 0.620 1
ATOM 93 O O . PHE 17 17 ? A 26.127 34.619 44.529 1 1 A PHE 0.620 1
ATOM 94 C CB . PHE 17 17 ? A 27.064 31.578 45.625 1 1 A PHE 0.620 1
ATOM 95 C CG . PHE 17 17 ? A 26.027 31.229 44.594 1 1 A PHE 0.620 1
ATOM 96 C CD1 . PHE 17 17 ? A 24.661 31.291 44.914 1 1 A PHE 0.620 1
ATOM 97 C CD2 . PHE 17 17 ? A 26.403 30.858 43.293 1 1 A PHE 0.620 1
ATOM 98 C CE1 . PHE 17 17 ? A 23.689 30.973 43.958 1 1 A PHE 0.620 1
ATOM 99 C CE2 . PHE 17 17 ? A 25.431 30.537 42.335 1 1 A PHE 0.620 1
ATOM 100 C CZ . PHE 17 17 ? A 24.074 30.589 42.669 1 1 A PHE 0.620 1
ATOM 101 N N . LYS 18 18 ? A 26.335 34.521 46.761 1 1 A LYS 0.630 1
ATOM 102 C CA . LYS 18 18 ? A 25.479 35.656 47.039 1 1 A LYS 0.630 1
ATOM 103 C C . LYS 18 18 ? A 25.979 36.981 46.479 1 1 A LYS 0.630 1
ATOM 104 O O . LYS 18 18 ? A 25.206 37.776 45.944 1 1 A LYS 0.630 1
ATOM 105 C CB . LYS 18 18 ? A 25.328 35.795 48.567 1 1 A LYS 0.630 1
ATOM 106 C CG . LYS 18 18 ? A 24.356 36.901 49.005 1 1 A LYS 0.630 1
ATOM 107 C CD . LYS 18 18 ? A 24.196 36.962 50.533 1 1 A LYS 0.630 1
ATOM 108 C CE . LYS 18 18 ? A 23.246 38.063 51.012 1 1 A LYS 0.630 1
ATOM 109 N NZ . LYS 18 18 ? A 23.102 38.055 52.488 1 1 A LYS 0.630 1
ATOM 110 N N . GLY 19 19 ? A 27.297 37.255 46.587 1 1 A GLY 0.650 1
ATOM 111 C CA . GLY 19 19 ? A 27.900 38.447 46.002 1 1 A GLY 0.650 1
ATOM 112 C C . GLY 19 19 ? A 27.934 38.394 44.498 1 1 A GLY 0.650 1
ATOM 113 O O . GLY 19 19 ? A 27.630 39.384 43.836 1 1 A GLY 0.650 1
ATOM 114 N N . VAL 20 20 ? A 28.232 37.216 43.913 1 1 A VAL 0.640 1
ATOM 115 C CA . VAL 20 20 ? A 28.184 36.990 42.471 1 1 A VAL 0.640 1
ATOM 116 C C . VAL 20 20 ? A 26.792 37.250 41.923 1 1 A VAL 0.640 1
ATOM 117 O O . VAL 20 20 ? A 26.621 38.018 40.979 1 1 A VAL 0.640 1
ATOM 118 C CB . VAL 20 20 ? A 28.621 35.564 42.110 1 1 A VAL 0.640 1
ATOM 119 C CG1 . VAL 20 20 ? A 28.330 35.179 40.642 1 1 A VAL 0.640 1
ATOM 120 C CG2 . VAL 20 20 ? A 30.131 35.419 42.345 1 1 A VAL 0.640 1
ATOM 121 N N . GLY 21 21 ? A 25.750 36.668 42.557 1 1 A GLY 0.650 1
ATOM 122 C CA . GLY 21 21 ? A 24.345 36.899 42.232 1 1 A GLY 0.650 1
ATOM 123 C C . GLY 21 21 ? A 23.906 38.341 42.274 1 1 A GLY 0.650 1
ATOM 124 O O . GLY 21 21 ? A 23.246 38.826 41.359 1 1 A GLY 0.650 1
ATOM 125 N N . LYS 22 22 ? A 24.275 39.080 43.336 1 1 A LYS 0.610 1
ATOM 126 C CA . LYS 22 22 ? A 24.016 40.507 43.428 1 1 A LYS 0.610 1
ATOM 127 C C . LYS 22 22 ? A 24.662 41.357 42.335 1 1 A LYS 0.610 1
ATOM 128 O O . LYS 22 22 ? A 23.979 42.116 41.653 1 1 A LYS 0.610 1
ATOM 129 C CB . LYS 22 22 ? A 24.530 41.040 44.779 1 1 A LYS 0.610 1
ATOM 130 C CG . LYS 22 22 ? A 23.652 40.663 45.974 1 1 A LYS 0.610 1
ATOM 131 C CD . LYS 22 22 ? A 24.333 41.123 47.268 1 1 A LYS 0.610 1
ATOM 132 C CE . LYS 22 22 ? A 23.537 40.824 48.530 1 1 A LYS 0.610 1
ATOM 133 N NZ . LYS 22 22 ? A 22.303 41.636 48.547 1 1 A LYS 0.610 1
ATOM 134 N N . VAL 23 23 ? A 25.987 41.209 42.120 1 1 A VAL 0.630 1
ATOM 135 C CA . VAL 23 23 ? A 26.756 41.962 41.132 1 1 A VAL 0.630 1
ATOM 136 C C . VAL 23 23 ? A 26.261 41.668 39.725 1 1 A VAL 0.630 1
ATOM 137 O O . VAL 23 23 ? A 26.061 42.551 38.889 1 1 A VAL 0.630 1
ATOM 138 C CB . VAL 23 23 ? A 28.247 41.615 41.245 1 1 A VAL 0.630 1
ATOM 139 C CG1 . VAL 23 23 ? A 29.089 42.224 40.107 1 1 A VAL 0.630 1
ATOM 140 C CG2 . VAL 23 23 ? A 28.811 42.121 42.587 1 1 A VAL 0.630 1
ATOM 141 N N . ARG 24 24 ? A 26.012 40.378 39.437 1 1 A ARG 0.560 1
ATOM 142 C CA . ARG 24 24 ? A 25.561 39.912 38.144 1 1 A ARG 0.560 1
ATOM 143 C C . ARG 24 24 ? A 24.168 40.367 37.764 1 1 A ARG 0.560 1
ATOM 144 O O . ARG 24 24 ? A 23.897 40.731 36.620 1 1 A ARG 0.560 1
ATOM 145 C CB . ARG 24 24 ? A 25.632 38.378 38.092 1 1 A ARG 0.560 1
ATOM 146 C CG . ARG 24 24 ? A 25.677 37.825 36.662 1 1 A ARG 0.560 1
ATOM 147 C CD . ARG 24 24 ? A 26.974 37.058 36.423 1 1 A ARG 0.560 1
ATOM 148 N NE . ARG 24 24 ? A 26.998 36.700 34.965 1 1 A ARG 0.560 1
ATOM 149 C CZ . ARG 24 24 ? A 28.054 36.850 34.151 1 1 A ARG 0.560 1
ATOM 150 N NH1 . ARG 24 24 ? A 29.233 37.270 34.600 1 1 A ARG 0.560 1
ATOM 151 N NH2 . ARG 24 24 ? A 27.930 36.579 32.852 1 1 A ARG 0.560 1
ATOM 152 N N . LYS 25 25 ? A 23.248 40.360 38.744 1 1 A LYS 0.610 1
ATOM 153 C CA . LYS 25 25 ? A 21.906 40.876 38.600 1 1 A LYS 0.610 1
ATOM 154 C C . LYS 25 25 ? A 21.869 42.375 38.314 1 1 A LYS 0.610 1
ATOM 155 O O . LYS 25 25 ? A 21.118 42.820 37.452 1 1 A LYS 0.610 1
ATOM 156 C CB . LYS 25 25 ? A 21.076 40.521 39.852 1 1 A LYS 0.610 1
ATOM 157 C CG . LYS 25 25 ? A 19.606 40.941 39.740 1 1 A LYS 0.610 1
ATOM 158 C CD . LYS 25 25 ? A 18.759 40.582 40.968 1 1 A LYS 0.610 1
ATOM 159 C CE . LYS 25 25 ? A 17.324 41.098 40.830 1 1 A LYS 0.610 1
ATOM 160 N NZ . LYS 25 25 ? A 16.542 40.740 42.032 1 1 A LYS 0.610 1
ATOM 161 N N . GLN 26 26 ? A 22.723 43.174 38.991 1 1 A GLN 0.580 1
ATOM 162 C CA . GLN 26 26 ? A 22.871 44.602 38.745 1 1 A GLN 0.580 1
ATOM 163 C C . GLN 26 26 ? A 23.332 44.922 37.328 1 1 A GLN 0.580 1
ATOM 164 O O . GLN 26 26 ? A 22.810 45.819 36.676 1 1 A GLN 0.580 1
ATOM 165 C CB . GLN 26 26 ? A 23.920 45.211 39.708 1 1 A GLN 0.580 1
ATOM 166 C CG . GLN 26 26 ? A 23.489 45.328 41.185 1 1 A GLN 0.580 1
ATOM 167 C CD . GLN 26 26 ? A 24.671 45.824 42.020 1 1 A GLN 0.580 1
ATOM 168 O OE1 . GLN 26 26 ? A 25.839 45.618 41.703 1 1 A GLN 0.580 1
ATOM 169 N NE2 . GLN 26 26 ? A 24.364 46.526 43.138 1 1 A GLN 0.580 1
ATOM 170 N N . PHE 27 27 ? A 24.322 44.168 36.809 1 1 A PHE 0.500 1
ATOM 171 C CA . PHE 27 27 ? A 24.788 44.298 35.435 1 1 A PHE 0.500 1
ATOM 172 C C . PHE 27 27 ? A 23.714 43.944 34.400 1 1 A PHE 0.500 1
ATOM 173 O O . PHE 27 27 ? A 23.598 44.577 33.363 1 1 A PHE 0.500 1
ATOM 174 C CB . PHE 27 27 ? A 26.063 43.430 35.222 1 1 A PHE 0.500 1
ATOM 175 C CG . PHE 27 27 ? A 26.609 43.549 33.814 1 1 A PHE 0.500 1
ATOM 176 C CD1 . PHE 27 27 ? A 26.251 42.605 32.833 1 1 A PHE 0.500 1
ATOM 177 C CD2 . PHE 27 27 ? A 27.377 44.658 33.427 1 1 A PHE 0.500 1
ATOM 178 C CE1 . PHE 27 27 ? A 26.667 42.758 31.504 1 1 A PHE 0.500 1
ATOM 179 C CE2 . PHE 27 27 ? A 27.804 44.807 32.100 1 1 A PHE 0.500 1
ATOM 180 C CZ . PHE 27 27 ? A 27.458 43.851 31.140 1 1 A PHE 0.500 1
ATOM 181 N N . LYS 28 28 ? A 22.930 42.883 34.658 1 1 A LYS 0.460 1
ATOM 182 C CA . LYS 28 28 ? A 21.834 42.465 33.804 1 1 A LYS 0.460 1
ATOM 183 C C . LYS 28 28 ? A 20.616 43.398 33.765 1 1 A LYS 0.460 1
ATOM 184 O O . LYS 28 28 ? A 19.883 43.451 32.784 1 1 A LYS 0.460 1
ATOM 185 C CB . LYS 28 28 ? A 21.346 41.074 34.266 1 1 A LYS 0.460 1
ATOM 186 C CG . LYS 28 28 ? A 20.222 40.502 33.387 1 1 A LYS 0.460 1
ATOM 187 C CD . LYS 28 28 ? A 19.689 39.151 33.863 1 1 A LYS 0.460 1
ATOM 188 C CE . LYS 28 28 ? A 18.524 38.657 33.002 1 1 A LYS 0.460 1
ATOM 189 N NZ . LYS 28 28 ? A 18.064 37.339 33.489 1 1 A LYS 0.460 1
ATOM 190 N N . GLU 29 29 ? A 20.329 44.056 34.901 1 1 A GLU 0.400 1
ATOM 191 C CA . GLU 29 29 ? A 19.311 45.079 35.059 1 1 A GLU 0.400 1
ATOM 192 C C . GLU 29 29 ? A 19.666 46.431 34.427 1 1 A GLU 0.400 1
ATOM 193 O O . GLU 29 29 ? A 18.788 47.138 33.934 1 1 A GLU 0.400 1
ATOM 194 C CB . GLU 29 29 ? A 19.028 45.243 36.572 1 1 A GLU 0.400 1
ATOM 195 C CG . GLU 29 29 ? A 17.911 46.254 36.924 1 1 A GLU 0.400 1
ATOM 196 C CD . GLU 29 29 ? A 17.563 46.293 38.414 1 1 A GLU 0.400 1
ATOM 197 O OE1 . GLU 29 29 ? A 18.089 45.457 39.198 1 1 A GLU 0.400 1
ATOM 198 O OE2 . GLU 29 29 ? A 16.726 47.160 38.777 1 1 A GLU 0.400 1
ATOM 199 N N . ALA 30 30 ? A 20.960 46.819 34.475 1 1 A ALA 0.410 1
ATOM 200 C CA . ALA 30 30 ? A 21.488 48.060 33.928 1 1 A ALA 0.410 1
ATOM 201 C C . ALA 30 30 ? A 21.718 48.138 32.384 1 1 A ALA 0.410 1
ATOM 202 O O . ALA 30 30 ? A 21.532 47.129 31.657 1 1 A ALA 0.410 1
ATOM 203 C CB . ALA 30 30 ? A 22.848 48.343 34.605 1 1 A ALA 0.410 1
ATOM 204 O OXT . ALA 30 30 ? A 22.104 49.256 31.925 1 1 A ALA 0.410 1
#
#
loop_
_atom_type.symbol
C
N
O
#
#
loop_
_ma_qa_metric.id
_ma_qa_metric.name
_ma_qa_metric.description
_ma_qa_metric.type
_ma_qa_metric.mode
_ma_qa_metric.type_other_details
_ma_qa_metric.software_group_id
1 QMEANDisCo 'Predicted accuracy according to all-atom lDDT in [0,1].'
'pLDDT all-atom in [0,1]' local . 5
2 QMEANDisCo 'Predicted accuracy according to all-atom lDDT in [0,1].'
'pLDDT all-atom in [0,1]' global . 5
3 GMQE
'Global Model Quality Estimate of the model accuracy, calculated by SWISS-MODEL.'
'normalized score' global . 6
#
#
loop_
_ma_qa_metric_global.ordinal_id
_ma_qa_metric_global.model_id
_ma_qa_metric_global.metric_id
_ma_qa_metric_global.metric_value
1 1 2 0.585
2 1 3 0.518
#
#
loop_
_ma_qa_metric_local.ordinal_id
_ma_qa_metric_local.model_id
_ma_qa_metric_local.label_asym_id
_ma_qa_metric_local.label_seq_id
_ma_qa_metric_local.label_comp_id
_ma_qa_metric_local.metric_id
_ma_qa_metric_local.metric_value
1 1 A 6 PHE 1 0.550
2 1 A 7 ALA 1 0.630
3 1 A 8 LYS 1 0.560
4 1 A 9 ILE 1 0.560
5 1 A 10 LEU 1 0.570
6 1 A 11 LYS 1 0.620
7 1 A 12 SER 1 0.650
8 1 A 13 ILE 1 0.610
9 1 A 14 ALA 1 0.690
10 1 A 15 LYS 1 0.620
11 1 A 16 PHE 1 0.610
12 1 A 17 PHE 1 0.620
13 1 A 18 LYS 1 0.630
14 1 A 19 GLY 1 0.650
15 1 A 20 VAL 1 0.640
16 1 A 21 GLY 1 0.650
17 1 A 22 LYS 1 0.610
18 1 A 23 VAL 1 0.630
19 1 A 24 ARG 1 0.560
20 1 A 25 LYS 1 0.610
21 1 A 26 GLN 1 0.580
22 1 A 27 PHE 1 0.500
23 1 A 28 LYS 1 0.460
24 1 A 29 GLU 1 0.400
25 1 A 30 ALA 1 0.410
#
#
loop_
_pdbx_data_usage.id
_pdbx_data_usage.type
_pdbx_data_usage.details
_pdbx_data_usage.url
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