data_SMR-d98f16ce678e2c9b0ce451eb810a20e8_1
_entry.id SMR-d98f16ce678e2c9b0ce451eb810a20e8_1
_struct.entry_id SMR-d98f16ce678e2c9b0ce451eb810a20e8_1
_struct.pdbx_model_details
;This model was generated unsupervised by the SWISS-MODEL homology-modelling pipeline for the SWISS-MODEL Repository, a database of annotated 3D protein structure models. The modelled monomer covers following UniProtKB entries:

  - P80091/ CY550_VIRHA, Cytochrome c-550

Estimated model accuracy of this model is 0.574, calculated by SWISS-MODEL as Global Model Quality Estimate (GMQE).
;
_struct.pdbx_structure_determination_methodology computational
_struct.title 'Model for UniProtKB entries P80091'
_audit_conform.dict_location https://raw.githubusercontent.com/ihmwg/ModelCIF/80e1e22/dist/mmcif_ma.dic
_audit_conform.dict_name mmcif_ma.dic
_audit_conform.dict_version 1.4.7
#
loop_
_citation.id
_citation.title
_citation.journal_abbrev
_citation.journal_volume
_citation.page_first
_citation.page_last
_citation.year
_citation.pdbx_database_id_PubMed
_citation.pdbx_database_id_DOI
primary 'The SWISS-MODEL Repository - new features and functionality'
'Nucleic Acids Res.' 45 D313 D319 2017 27899672 10.1093/nar/gkw1132
2 'SWISS-MODEL: homology modelling of protein structures and complexes'
'Nucleic Acids Res.' 46 W296 W303 2018 29788355 10.1093/nar/gky427
3 'ProMod3 - A versatile homology modelling toolbox' 'PLoS Comput. Biol.' 17(1)
1 18 2021 33507980 10.1371/journal.pcbi.1008667
4 'QMEANDisCo - distance constraints applied on model quality estimation'
Bioinformatics 36 1765 1771 2020 31697312 10.1093/bioinformatics/btz828
5
'OpenStructure: an integrated software framework for computational structural biology'
'Acta Crystallogr., Sect. D: Biol. Crystallogr.' 69 701 709 2013 23633579
10.1107/S0907444913007051
6 'BLAST+: architecture and applications' 'BMC Bioinf.' 10 421 . 2009 20003500
10.1186/1471-2105-10-421
7 'HH-suite3 for fast remote homology detection and deep protein annotation'
'BMC Bioinf.' 20 473 . 2019 31521110 10.1186/s12859-019-3019-7
#
#
loop_
_citation_author.citation_id
_citation_author.name
_citation_author.ordinal
primary 'Bienert, S.' 1
primary 'Waterhouse, A.' 2
primary 'de Beer, T.A.P.' 3
primary 'Tauriello, G.' 4
primary 'Studer, G.' 5
primary 'Bordoli, L.' 6
primary 'Schwede, T.' 7
2 'Waterhouse, A.' 8
2 'Bertoni, M.' 9
2 'Bienert, S.' 10
2 'Studer, G.' 11
2 'Tauriello, G.' 12
2 'Gumienny, R.' 13
2 'Heer, F.T.' 14
2 'de Beer, T.A.P.' 15
2 'Rempfer, C.' 16
2 'Bordoli, L.' 17
2 'Lepore, R.' 18
2 'Schwede, T.' 19
3 'Studer, G.' 20
3 'Tauriello, G.' 21
3 'Bienert, S.' 22
3 'Biasini, M.' 23
3 'Johner, N.' 24
3 'Schwede, T.' 25
4 'Studer, G.' 26
4 'Rempfer, C.' 27
4 'Waterhouse, A.M.' 28
4 'Gumienny, R.' 29
4 'Haas, J.' 30
4 'Schwede, T.' 31
5 'Biasini, M.' 32
5 'Schmidt, T.' 33
5 'Bienert, S.' 34
5 'Mariani, V.' 35
5 'Studer, G.' 36
5 'Haas, J.' 37
5 'Johner, N.' 38
5 'Schenk, A.D.' 39
5 'Philippsen, A.' 40
5 'Schwede, T.' 41
6 'Camacho, C.' 42
6 'Coulouris, G.' 43
6 'Avagyan, V.' 44
6 'Ma, N.' 45
6 'Papadopoulos, J.' 46
6 'Bealer, K.' 47
6 'Madden, T.L.' 48
7 'Steinegger, M.' 49
7 'Meier, M.' 50
7 'Mirdita, M.' 51
7 'Vohringer, H.' 52
7 'Haunsberger, S.J.' 53
7 'Soding, J.' 54
#
#
loop_
_software.pdbx_ordinal
_software.name
_software.classification
_software.description
_software.version
_software.type
_software.location
_software.citation_id
1 SWISS-MODEL 'model building' 'Homology modelling web service' 2025-06.3
package https://swissmodel.expasy.org 2
2 ProMod3 'model building' 'Modular homology modelling engine' 3.5.0 library
https://git.scicore.unibas.ch/schwede/ProMod3 3
3 QMEAN 'model building' 'QMEAN - Qualitative Model Energy ANalysis' 4.4.0
library https://git.scicore.unibas.ch/schwede/QMEAN 4
4 OpenStructure 'data processing'
'Open-Source Computational Structural Biology Framework' 2.10.0 package
https://openstructure.org/ 5
5 BLAST 'data collection' . 2.14.1 package https://blast.ncbi.nlm.nih.gov 6
6 HH-suite 'data collection' 'HH-suite3 for sensitive sequence searching' 3.2.0
package https://github.com/soedinglab/hh-suite 7
#
#
loop_
_ma_software_group.ordinal_id
_ma_software_group.group_id
_ma_software_group.software_id
_ma_software_group.parameter_group_id
1 1 6 .
2 2 1 .
3 2 4 .
4 2 5 .
5 2 6 .
6 3 1 .
7 3 4 .
8 4 1 .
9 4 2 .
10 4 4 .
11 5 3 .
12 6 1 .
13 6 3 .
14 6 4 .
#
#
loop_
_audit_author.name
_audit_author.pdbx_ordinal
'Bienert, S.' 1
'Waterhouse, A.' 2
'de Beer, T.A.P.' 3
'Tauriello, G.' 4
'Studer, G.' 5
'Bordoli, L.' 6
'Schwede, T.' 7
#
#
loop_
_chem_comp.id
_chem_comp.type
_chem_comp.name
_chem_comp.formula
_chem_comp.formula_weight
_chem_comp.ma_provenance
ALA 'L-peptide linking' ALANINE 'C3 H7 N O2' 89.094 'CCD Core'
ARG 'L-peptide linking' ARGININE 'C6 H15 N4 O2 1' 175.212 'CCD Core'
ASN 'L-peptide linking' ASPARAGINE 'C4 H8 N2 O3' 132.119 'CCD Core'
ASP 'L-peptide linking' 'ASPARTIC ACID' 'C4 H7 N O4' 133.103 'CCD Core'
CYS 'L-peptide linking' CYSTEINE 'C3 H7 N O2 S' 121.154 'CCD Core'
GLN 'L-peptide linking' GLUTAMINE 'C5 H10 N2 O3' 146.146 'CCD Core'
GLU 'L-peptide linking' 'GLUTAMIC ACID' 'C5 H9 N O4' 147.130 'CCD Core'
GLY 'peptide linking' GLYCINE 'C2 H5 N O2' 75.067 'CCD Core'
HIS 'L-peptide linking' HISTIDINE 'C6 H10 N3 O2 1' 156.165 'CCD Core'
ILE 'L-peptide linking' ISOLEUCINE 'C6 H13 N O2' 131.175 'CCD Core'
LEU 'L-peptide linking' LEUCINE 'C6 H13 N O2' 131.175 'CCD Core'
LYS 'L-peptide linking' LYSINE 'C6 H15 N2 O2 1' 147.198 'CCD Core'
MET 'L-peptide linking' METHIONINE 'C5 H11 N O2 S' 149.208 'CCD Core'
PHE 'L-peptide linking' PHENYLALANINE 'C9 H11 N O2' 165.192 'CCD Core'
PRO 'L-peptide linking' PROLINE 'C5 H9 N O2' 115.132 'CCD Core'
SER 'L-peptide linking' SERINE 'C3 H7 N O3' 105.093 'CCD Core'
THR 'L-peptide linking' THREONINE 'C4 H9 N O3' 119.120 'CCD Core'
TRP 'L-peptide linking' TRYPTOPHAN 'C11 H12 N2 O2' 204.229 'CCD Core'
TYR 'L-peptide linking' TYROSINE 'C9 H11 N O3' 181.191 'CCD Core'
VAL 'L-peptide linking' VALINE 'C5 H11 N O2' 117.148 'CCD Core'
#
#
loop_
_entity.id
_entity.type
_entity.src_method
_entity.pdbx_description
_entity.formula_weight
_entity.pdbx_number_of_molecules
_entity.details
1 polymer man . 3966.039 1 .
#
#
loop_
_struct_ref.id
_struct_ref.entity_id
_struct_ref.db_name
_struct_ref.db_code
_struct_ref.pdbx_db_accession
_struct_ref.pdbx_align_begin
_struct_ref.pdbx_seq_one_letter_code
_struct_ref.details
1 1 UNP CY550_VIRHA P80091 1 GGSVDSAAAEEVFESNCASCHGADLSGAGPDLTQV
'Cytochrome c-550'
#
#
loop_
_struct_ref_seq.align_id
_struct_ref_seq.ref_id
_struct_ref_seq.seq_align_beg
_struct_ref_seq.seq_align_end
_struct_ref_seq.db_align_beg
_struct_ref_seq.db_align_end
1 1 1 35 1 35
#
#
loop_
_ma_target_ref_db_details.target_entity_id
_ma_target_ref_db_details.db_name
_ma_target_ref_db_details.db_name_other_details
_ma_target_ref_db_details.db_code
_ma_target_ref_db_details.db_accession
_ma_target_ref_db_details.seq_db_isoform
_ma_target_ref_db_details.seq_db_align_begin
_ma_target_ref_db_details.seq_db_align_end
_ma_target_ref_db_details.ncbi_taxonomy_id
_ma_target_ref_db_details.organism_scientific
_ma_target_ref_db_details.seq_db_sequence_version_date
_ma_target_ref_db_details.seq_db_sequence_checksum
_ma_target_ref_db_details.is_primary
1 UNP . CY550_VIRHA P80091 . 1 35 1482
'Virgibacillus halodenitrificans (Bacillus halodenitrificans)' 1992-05-01
C3B5D6D8F23004EB .
#
#
loop_
_entity_poly.entity_id
_entity_poly.type
_entity_poly.nstd_linkage
_entity_poly.nstd_monomer
_entity_poly.pdbx_strand_id
_entity_poly.pdbx_seq_one_letter_code
_entity_poly.pdbx_seq_one_letter_code_can
1 polypeptide(L) no no C GGSVDSAAAEEVFESNCASCHGADLSGAGPDLTQV
GGSVDSAAAEEVFESNCASCHGADLSGAGPDLTQV
#
#
loop_
_entity_poly_seq.entity_id
_entity_poly_seq.num
_entity_poly_seq.mon_id
_entity_poly_seq.hetero
1 1 GLY .
1 2 GLY .
1 3 SER .
1 4 VAL .
1 5 ASP .
1 6 SER .
1 7 ALA .
1 8 ALA .
1 9 ALA .
1 10 GLU .
1 11 GLU .
1 12 VAL .
1 13 PHE .
1 14 GLU .
1 15 SER .
1 16 ASN .
1 17 CYS .
1 18 ALA .
1 19 SER .
1 20 CYS .
1 21 HIS .
1 22 GLY .
1 23 ALA .
1 24 ASP .
1 25 LEU .
1 26 SER .
1 27 GLY .
1 28 ALA .
1 29 GLY .
1 30 PRO .
1 31 ASP .
1 32 LEU .
1 33 THR .
1 34 GLN .
1 35 VAL .
#
#
loop_
_struct_asym.id
_struct_asym.entity_id
_struct_asym.details
A 1 .
#
#
loop_
_pdbx_poly_seq_scheme.asym_id
_pdbx_poly_seq_scheme.entity_id
_pdbx_poly_seq_scheme.seq_id
_pdbx_poly_seq_scheme.mon_id
_pdbx_poly_seq_scheme.pdb_seq_num
_pdbx_poly_seq_scheme.auth_seq_num
_pdbx_poly_seq_scheme.pdb_mon_id
_pdbx_poly_seq_scheme.auth_mon_id
_pdbx_poly_seq_scheme.pdb_strand_id
_pdbx_poly_seq_scheme.pdb_ins_code
A 1 1 GLY 1 ? ? ? C .
A 1 2 GLY 2 ? ? ? C .
A 1 3 SER 3 ? ? ? C .
A 1 4 VAL 4 ? ? ? C .
A 1 5 ASP 5 5 ASP ASP C .
A 1 6 SER 6 6 SER SER C .
A 1 7 ALA 7 7 ALA ALA C .
A 1 8 ALA 8 8 ALA ALA C .
A 1 9 ALA 9 9 ALA ALA C .
A 1 10 GLU 10 10 GLU GLU C .
A 1 11 GLU 11 11 GLU GLU C .
A 1 12 VAL 12 12 VAL VAL C .
A 1 13 PHE 13 13 PHE PHE C .
A 1 14 GLU 14 14 GLU GLU C .
A 1 15 SER 15 15 SER SER C .
A 1 16 ASN 16 16 ASN ASN C .
A 1 17 CYS 17 17 CYS CYS C .
A 1 18 ALA 18 18 ALA ALA C .
A 1 19 SER 19 19 SER SER C .
A 1 20 CYS 20 20 CYS CYS C .
A 1 21 HIS 21 21 HIS HIS C .
A 1 22 GLY 22 22 GLY GLY C .
A 1 23 ALA 23 23 ALA ALA C .
A 1 24 ASP 24 24 ASP ASP C .
A 1 25 LEU 25 25 LEU LEU C .
A 1 26 SER 26 26 SER SER C .
A 1 27 GLY 27 27 GLY GLY C .
A 1 28 ALA 28 28 ALA ALA C .
A 1 29 GLY 29 29 GLY GLY C .
A 1 30 PRO 30 30 PRO PRO C .
A 1 31 ASP 31 31 ASP ASP C .
A 1 32 LEU 32 32 LEU LEU C .
A 1 33 THR 33 33 THR THR C .
A 1 34 GLN 34 ? ? ? C .
A 1 35 VAL 35 ? ? ? C .
#
#
loop_
_ma_data.id
_ma_data.name
_ma_data.content_type
_ma_data.content_type_other_details
1
'Cbb3-type cytochrome c oxidase subunit CcoP {PDB ID=6xkw, label_asym_id=C, auth_asym_id=p, SMTL ID=6xkw.1.C}'
'template structure' .
2 . target .
3 'Target-template alignment by HHblits to 6xkw, label_asym_id=C'
'target-template alignment' .
4 'model 1' 'model coordinates' .
5 SMTL 'reference database' .
6 PDB 'reference database' .
7 'Template search output' other 'Results of the sequence search'
#
#
loop_
_ma_data_group.ordinal_id
_ma_data_group.group_id
_ma_data_group.data_id
1 1 2
2 1 5
3 1 6
4 2 7
5 3 2
6 3 1
7 3 3
8 4 1
9 4 3
10 5 4
#
#
loop_
_ma_data_ref_db.data_id
_ma_data_ref_db.name
_ma_data_ref_db.location_url
_ma_data_ref_db.version
_ma_data_ref_db.release_date
5 SMTL https://swissmodel.expasy.org/templates/ . 2025-06-25
6 PDB https://www.wwpdb.org . 2025-06-20
#
#
loop_
_ma_target_entity.entity_id
_ma_target_entity.data_id
_ma_target_entity.origin
1 2 'reference database'
#
#
loop_
_ma_target_entity_instance.asym_id
_ma_target_entity_instance.entity_id
_ma_target_entity_instance.details
A 1 .
#
#
loop_
_ma_template_trans_matrix.id
_ma_template_trans_matrix.rot_matrix[1][1]
_ma_template_trans_matrix.rot_matrix[2][1]
_ma_template_trans_matrix.rot_matrix[3][1]
_ma_template_trans_matrix.rot_matrix[1][2]
_ma_template_trans_matrix.rot_matrix[2][2]
_ma_template_trans_matrix.rot_matrix[3][2]
_ma_template_trans_matrix.rot_matrix[1][3]
_ma_template_trans_matrix.rot_matrix[2][3]
_ma_template_trans_matrix.rot_matrix[3][3]
_ma_template_trans_matrix.tr_vector[1]
_ma_template_trans_matrix.tr_vector[2]
_ma_template_trans_matrix.tr_vector[3]
1 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000
1.000000 0 0 0
#
#
loop_
_ma_template_details.ordinal_id
_ma_template_details.template_id
_ma_template_details.template_origin
_ma_template_details.template_entity_type
_ma_template_details.template_trans_matrix_id
_ma_template_details.template_data_id
_ma_template_details.target_asym_id
_ma_template_details.template_label_asym_id
_ma_template_details.template_label_entity_id
_ma_template_details.template_model_num
_ma_template_details.template_auth_asym_id
1 1 'reference database' polymer 1 1 A C 3 1 p
#
#
loop_
_ma_template_poly.template_id
_ma_template_poly.seq_one_letter_code
_ma_template_poly.seq_one_letter_code_can
1
;MSKKPTTKKEVQTTGHSWDGIEELNTPLPRWWLWTFYATIVWGVAYSIAMPAWPIFASGATPGILGSSTR
ADVEKDIAKFAEMNKAVEDKLVATDLTAIAADPELVTYTRNAGAAVFRTWCAQCHGAGAGGNTGFPSLLD
GDWLHGGSIETIYTNIKHGIRDPLDPDTLPVANMPAHLTDELLEPAQIDDVVQYVLKISGQPADEARATA
GQQVFADNCVSCHGEDAKGMVEMGAPNLTDGIWLYGGDANTITTTIQLGRGGVMPSWSWAADGAKPRLSE
AQIRAVASYVHSLGGGQ
;

;MSKKPTTKKEVQTTGHSWDGIEELNTPLPRWWLWTFYATIVWGVAYSIAMPAWPIFASGATPGILGSSTR
ADVEKDIAKFAEMNKAVEDKLVATDLTAIAADPELVTYTRNAGAAVFRTWCAQCHGAGAGGNTGFPSLLD
GDWLHGGSIETIYTNIKHGIRDPLDPDTLPVANMPAHLTDELLEPAQIDDVVQYVLKISGQPADEARATA
GQQVFADNCVSCHGEDAKGMVEMGAPNLTDGIWLYGGDANTITTTIQLGRGGVMPSWSWAADGAKPRLSE
AQIRAVASYVHSLGGGQ
;

#
#
loop_
_ma_template_poly_segment.id
_ma_template_poly_segment.template_id
_ma_template_poly_segment.residue_number_begin
_ma_template_poly_segment.residue_number_end
1 1 207 239
#
#
loop_
_ma_template_ref_db_details.template_id
_ma_template_ref_db_details.db_name
_ma_template_ref_db_details.db_name_other_details
_ma_template_ref_db_details.db_accession_code
_ma_template_ref_db_details.db_version_date
1 PDB . 6xkw 2024-10-23
#
#
loop_
_ma_target_template_poly_mapping.id
_ma_target_template_poly_mapping.template_segment_id
_ma_target_template_poly_mapping.target_asym_id
_ma_target_template_poly_mapping.target_seq_id_begin
_ma_target_template_poly_mapping.target_seq_id_end
1 1 A 1 35
#
#
loop_
_ma_alignment_info.alignment_id
_ma_alignment_info.data_id
_ma_alignment_info.software_group_id
_ma_alignment_info.alignment_length
_ma_alignment_info.alignment_type
_ma_alignment_info.alignment_mode
1 3 1 39 'target-template pairwise alignment' local
#
#
loop_
_ma_alignment_details.ordinal_id
_ma_alignment_details.alignment_id
_ma_alignment_details.template_segment_id
_ma_alignment_details.target_asym_id
_ma_alignment_details.score_type
_ma_alignment_details.score_type_other_details
_ma_alignment_details.score_value
_ma_alignment_details.percent_sequence_identity
_ma_alignment_details.sequence_identity_denominator
_ma_alignment_details.sequence_identity_denominator_other_details
1 1 1 A 'HHblits e-value' . 6e-07 48.276
'Number of aligned residue pairs (not including the gaps)' .
#
#
loop_
_ma_alignment.ordinal_id
_ma_alignment.alignment_id
_ma_alignment.target_template_flag
_ma_alignment.sequence
1 1 1 GGSVDSAAAEEVFESNCASCHGADLSGA----GPDLTQV
2 1 2 ----RATAGQQVFADNCVSCHGEDAKGMVEMGAPNLT--
#
#
loop_
_ma_protocol_step.ordinal_id
_ma_protocol_step.protocol_id
_ma_protocol_step.step_id
_ma_protocol_step.method_type
_ma_protocol_step.step_name
_ma_protocol_step.details
_ma_protocol_step.software_group_id
_ma_protocol_step.input_data_group_id
_ma_protocol_step.output_data_group_id
1 1 1 'template search' 'template search' 'SWISS-MODEL template search in PDB' 2
1 2
2 1 2 'template selection' 'template selection'
'Automatic template selection by SWISS-MODEL {QSQE=0.000}' 3 2 4
3 1 3 modeling 'homology modeling'
'SWISS-MODEL auto-model mode using ProMod3 on 6xkw.1' 4 3 5
#
#
loop_
_ma_model_list.ordinal_id
_ma_model_list.model_name
_ma_model_list.data_id
_ma_model_list.model_type
_ma_model_list.model_type_other_details
1 'model 1' 4 'Homology model' .
#
#
loop_
_ma_model_group.id
_ma_model_group.name
_ma_model_group.details
1 . .
#
#
loop_
_ma_model_group_link.group_id
_ma_model_group_link.model_id
1 1
#
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_alt_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.auth_seq_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.label_entity_id
_atom_site.auth_asym_id
_atom_site.auth_comp_id
_atom_site.B_iso_or_equiv
_atom_site.pdbx_PDB_model_num
ATOM 1 N N . ASP 5 5 ? A 114.250 103.147 116.549 1 1 C ASP 0.580 1
ATOM 2 C CA . ASP 5 5 ? A 115.425 103.539 117.395 1 1 C ASP 0.580 1
ATOM 3 C C . ASP 5 5 ? A 115.715 102.670 118.615 1 1 C ASP 0.580 1
ATOM 4 O O . ASP 5 5 ? A 116.839 102.655 119.077 1 1 C ASP 0.580 1
ATOM 5 C CB . ASP 5 5 ? A 115.309 105.056 117.722 1 1 C ASP 0.580 1
ATOM 6 C CG . ASP 5 5 ? A 115.174 105.861 116.428 1 1 C ASP 0.580 1
ATOM 7 O OD1 . ASP 5 5 ? A 115.128 105.204 115.350 1 1 C ASP 0.580 1
ATOM 8 O OD2 . ASP 5 5 ? A 115.019 107.089 116.523 1 1 C ASP 0.580 1
ATOM 9 N N . SER 6 6 ? A 114.754 101.871 119.155 1 1 C SER 0.690 1
ATOM 10 C CA . SER 6 6 ? A 115.056 101.068 120.341 1 1 C SER 0.690 1
ATOM 11 C C . SER 6 6 ? A 115.641 99.704 120.041 1 1 C SER 0.690 1
ATOM 12 O O . SER 6 6 ? A 116.770 99.428 120.419 1 1 C SER 0.690 1
ATOM 13 C CB . SER 6 6 ? A 113.817 100.889 121.245 1 1 C SER 0.690 1
ATOM 14 O OG . SER 6 6 ? A 113.198 102.162 121.422 1 1 C SER 0.690 1
ATOM 15 N N . ALA 7 7 ? A 114.931 98.839 119.279 1 1 C ALA 0.740 1
ATOM 16 C CA . ALA 7 7 ? A 115.333 97.459 119.045 1 1 C ALA 0.740 1
ATOM 17 C C . ALA 7 7 ? A 116.707 97.285 118.408 1 1 C ALA 0.740 1
ATOM 18 O O . ALA 7 7 ? A 117.554 96.551 118.904 1 1 C ALA 0.740 1
ATOM 19 C CB . ALA 7 7 ? A 114.268 96.811 118.134 1 1 C ALA 0.740 1
ATOM 20 N N . ALA 8 8 ? A 116.997 98.047 117.336 1 1 C ALA 0.740 1
ATOM 21 C CA . ALA 8 8 ? A 118.310 98.072 116.725 1 1 C ALA 0.740 1
ATOM 22 C C . ALA 8 8 ? A 119.408 98.569 117.667 1 1 C ALA 0.740 1
ATOM 23 O O . ALA 8 8 ? A 120.507 98.033 117.727 1 1 C ALA 0.740 1
ATOM 24 C CB . ALA 8 8 ? A 118.252 98.974 115.476 1 1 C ALA 0.740 1
ATOM 25 N N . ALA 9 9 ? A 119.122 99.620 118.462 1 1 C ALA 0.720 1
ATOM 26 C CA . ALA 9 9 ? A 120.059 100.162 119.419 1 1 C ALA 0.720 1
ATOM 27 C C . ALA 9 9 ? A 120.439 99.193 120.528 1 1 C ALA 0.720 1
ATOM 28 O O . ALA 9 9 ? A 121.615 99.101 120.873 1 1 C ALA 0.720 1
ATOM 29 C CB . ALA 9 9 ? A 119.505 101.468 120.008 1 1 C ALA 0.720 1
ATOM 30 N N . GLU 10 10 ? A 119.481 98.410 121.074 1 1 C GLU 0.680 1
ATOM 31 C CA . GLU 10 10 ? A 119.765 97.374 122.056 1 1 C GLU 0.680 1
ATOM 32 C C . GLU 10 10 ? A 120.737 96.326 121.520 1 1 C GLU 0.680 1
ATOM 33 O O . GLU 10 10 ? A 121.773 96.068 122.135 1 1 C GLU 0.680 1
ATOM 34 C CB . GLU 10 10 ? A 118.449 96.694 122.519 1 1 C GLU 0.680 1
ATOM 35 C CG . GLU 10 10 ? A 117.513 97.637 123.324 1 1 C GLU 0.680 1
ATOM 36 C CD . GLU 10 10 ? A 116.140 97.043 123.649 1 1 C GLU 0.680 1
ATOM 37 O OE1 . GLU 10 10 ? A 115.835 95.906 123.215 1 1 C GLU 0.680 1
ATOM 38 O OE2 . GLU 10 10 ? A 115.360 97.776 124.314 1 1 C GLU 0.680 1
ATOM 39 N N . GLU 11 11 ? A 120.495 95.799 120.298 1 1 C GLU 0.720 1
ATOM 40 C CA . GLU 11 11 ? A 121.385 94.858 119.632 1 1 C GLU 0.720 1
ATOM 41 C C . GLU 11 11 ? A 122.798 95.399 119.375 1 1 C GLU 0.720 1
ATOM 42 O O . GLU 11 11 ? A 123.806 94.746 119.652 1 1 C GLU 0.720 1
ATOM 43 C CB . GLU 11 11 ? A 120.790 94.448 118.261 1 1 C GLU 0.720 1
ATOM 44 C CG . GLU 11 11 ? A 119.438 93.690 118.316 1 1 C GLU 0.720 1
ATOM 45 C CD . GLU 11 11 ? A 118.904 93.371 116.917 1 1 C GLU 0.720 1
ATOM 46 O OE1 . GLU 11 11 ? A 119.494 93.861 115.918 1 1 C GLU 0.720 1
ATOM 47 O OE2 . GLU 11 11 ? A 117.888 92.633 116.839 1 1 C GLU 0.720 1
ATOM 48 N N . VAL 12 12 ? A 122.922 96.648 118.869 1 1 C VAL 0.720 1
ATOM 49 C CA . VAL 12 12 ? A 124.215 97.307 118.673 1 1 C VAL 0.720 1
ATOM 50 C C . VAL 12 12 ? A 124.947 97.542 119.985 1 1 C VAL 0.720 1
ATOM 51 O O . VAL 12 12 ? A 126.160 97.331 120.091 1 1 C VAL 0.720 1
ATOM 52 C CB . VAL 12 12 ? A 124.100 98.643 117.935 1 1 C VAL 0.720 1
ATOM 53 C CG1 . VAL 12 12 ? A 125.489 99.308 117.775 1 1 C VAL 0.720 1
ATOM 54 C CG2 . VAL 12 12 ? A 123.497 98.426 116.533 1 1 C VAL 0.720 1
ATOM 55 N N . PHE 13 13 ? A 124.219 97.973 121.039 1 1 C PHE 0.650 1
ATOM 56 C CA . PHE 13 13 ? A 124.780 98.241 122.345 1 1 C PHE 0.650 1
ATOM 57 C C . PHE 13 13 ? A 125.409 96.998 122.949 1 1 C PHE 0.650 1
ATOM 58 O O . PHE 13 13 ? A 126.558 97.043 123.388 1 1 C PHE 0.650 1
ATOM 59 C CB . PHE 13 13 ? A 123.691 98.834 123.296 1 1 C PHE 0.650 1
ATOM 60 C CG . PHE 13 13 ? A 124.290 99.263 124.604 1 1 C PHE 0.650 1
ATOM 61 C CD1 . PHE 13 13 ? A 124.442 98.321 125.630 1 1 C PHE 0.650 1
ATOM 62 C CD2 . PHE 13 13 ? A 124.835 100.541 124.776 1 1 C PHE 0.650 1
ATOM 63 C CE1 . PHE 13 13 ? A 125.247 98.598 126.735 1 1 C PHE 0.650 1
ATOM 64 C CE2 . PHE 13 13 ? A 125.626 100.819 125.896 1 1 C PHE 0.650 1
ATOM 65 C CZ . PHE 13 13 ? A 125.864 99.842 126.859 1 1 C PHE 0.650 1
ATOM 66 N N . GLU 14 14 ? A 124.708 95.847 122.920 1 1 C GLU 0.670 1
ATOM 67 C CA . GLU 14 14 ? A 125.231 94.586 123.409 1 1 C GLU 0.670 1
ATOM 68 C C . GLU 14 14 ? A 126.490 94.137 122.682 1 1 C GLU 0.670 1
ATOM 69 O O . GLU 14 14 ? A 127.451 93.689 123.303 1 1 C GLU 0.670 1
ATOM 70 C CB . GLU 14 14 ? A 124.149 93.489 123.310 1 1 C GLU 0.670 1
ATOM 71 C CG . GLU 14 14 ? A 122.966 93.692 124.289 1 1 C GLU 0.670 1
ATOM 72 C CD . GLU 14 14 ? A 121.972 92.531 124.254 1 1 C GLU 0.670 1
ATOM 73 O OE1 . GLU 14 14 ? A 122.098 91.646 123.370 1 1 C GLU 0.670 1
ATOM 74 O OE2 . GLU 14 14 ? A 121.095 92.517 125.155 1 1 C GLU 0.670 1
ATOM 75 N N . SER 15 15 ? A 126.528 94.287 121.343 1 1 C SER 0.720 1
ATOM 76 C CA . SER 15 15 ? A 127.695 93.948 120.537 1 1 C SER 0.720 1
ATOM 77 C C . SER 15 15 ? A 128.939 94.805 120.770 1 1 C SER 0.720 1
ATOM 78 O O . SER 15 15 ? A 130.036 94.300 120.979 1 1 C SER 0.720 1
ATOM 79 C CB . SER 15 15 ? A 127.334 94.081 119.034 1 1 C SER 0.720 1
ATOM 80 O OG . SER 15 15 ? A 128.370 93.601 118.172 1 1 C SER 0.720 1
ATOM 81 N N . ASN 16 16 ? A 128.793 96.148 120.735 1 1 C ASN 0.640 1
ATOM 82 C CA . ASN 16 16 ? A 129.938 97.043 120.766 1 1 C ASN 0.640 1
ATOM 83 C C . ASN 16 16 ? A 130.029 97.852 122.033 1 1 C ASN 0.640 1
ATOM 84 O O . ASN 16 16 ? A 130.989 97.726 122.787 1 1 C ASN 0.640 1
ATOM 85 C CB . ASN 16 16 ? A 129.942 98.008 119.558 1 1 C ASN 0.640 1
ATOM 86 C CG . ASN 16 16 ? A 130.129 97.233 118.260 1 1 C ASN 0.640 1
ATOM 87 O OD1 . ASN 16 16 ? A 129.284 97.256 117.368 1 1 C ASN 0.640 1
ATOM 88 N ND2 . ASN 16 16 ? A 131.285 96.542 118.128 1 1 C ASN 0.640 1
ATOM 89 N N . CYS 17 17 ? A 129.056 98.737 122.301 1 1 C CYS 0.670 1
ATOM 90 C CA . CYS 17 17 ? A 129.120 99.715 123.371 1 1 C CYS 0.670 1
ATOM 91 C C . CYS 17 17 ? A 129.293 99.107 124.757 1 1 C CYS 0.670 1
ATOM 92 O O . CYS 17 17 ? A 130.027 99.619 125.592 1 1 C CYS 0.670 1
ATOM 93 C CB . CYS 17 17 ? A 127.849 100.584 123.347 1 1 C CYS 0.670 1
ATOM 94 S SG . CYS 17 17 ? A 127.540 101.291 121.696 1 1 C CYS 0.670 1
ATOM 95 N N . ALA 18 18 ? A 128.649 97.950 125.007 1 1 C ALA 0.710 1
ATOM 96 C CA . ALA 18 18 ? A 128.682 97.236 126.259 1 1 C ALA 0.710 1
ATOM 97 C C . ALA 18 18 ? A 130.064 96.769 126.703 1 1 C ALA 0.710 1
ATOM 98 O O . ALA 18 18 ? A 130.272 96.490 127.880 1 1 C ALA 0.710 1
ATOM 99 C CB . ALA 18 18 ? A 127.748 96.015 126.143 1 1 C ALA 0.710 1
ATOM 100 N N . SER 19 19 ? A 131.064 96.694 125.798 1 1 C SER 0.630 1
ATOM 101 C CA . SER 19 19 ? A 132.431 96.346 126.166 1 1 C SER 0.630 1
ATOM 102 C C . SER 19 19 ? A 133.084 97.355 127.095 1 1 C SER 0.630 1
ATOM 103 O O . SER 19 19 ? A 133.731 96.989 128.073 1 1 C SER 0.630 1
ATOM 104 C CB . SER 19 19 ? A 133.333 96.105 124.922 1 1 C SER 0.630 1
ATOM 105 O OG . SER 19 19 ? A 133.586 97.303 124.184 1 1 C SER 0.630 1
ATOM 106 N N . CYS 20 20 ? A 132.886 98.658 126.822 1 1 C CYS 0.600 1
ATOM 107 C CA . CYS 20 20 ? A 133.423 99.728 127.641 1 1 C CYS 0.600 1
ATOM 108 C C . CYS 20 20 ? A 132.395 100.258 128.613 1 1 C CYS 0.600 1
ATOM 109 O O . CYS 20 20 ? A 132.719 100.642 129.735 1 1 C CYS 0.600 1
ATOM 110 C CB . CYS 20 20 ? A 133.883 100.916 126.757 1 1 C CYS 0.600 1
ATOM 111 S SG . CYS 20 20 ? A 135.187 100.430 125.574 1 1 C CYS 0.600 1
ATOM 112 N N . HIS 21 21 ? A 131.109 100.267 128.219 1 1 C HIS 0.640 1
ATOM 113 C CA . HIS 21 21 ? A 130.083 100.926 129.003 1 1 C HIS 0.640 1
ATOM 114 C C . HIS 21 21 ? A 129.335 99.953 129.892 1 1 C HIS 0.640 1
ATOM 115 O O . HIS 21 21 ? A 128.521 100.345 130.726 1 1 C HIS 0.640 1
ATOM 116 C CB . HIS 21 21 ? A 129.104 101.637 128.048 1 1 C HIS 0.640 1
ATOM 117 C CG . HIS 21 21 ? A 129.820 102.656 127.224 1 1 C HIS 0.640 1
ATOM 118 N ND1 . HIS 21 21 ? A 130.532 103.618 127.882 1 1 C HIS 0.640 1
ATOM 119 C CD2 . HIS 21 21 ? A 130.097 102.709 125.903 1 1 C HIS 0.640 1
ATOM 120 C CE1 . HIS 21 21 ? A 131.230 104.235 126.961 1 1 C HIS 0.640 1
ATOM 121 N NE2 . HIS 21 21 ? A 131.010 103.727 125.728 1 1 C HIS 0.640 1
ATOM 122 N N . GLY 22 22 ? A 129.622 98.641 129.767 1 1 C GLY 0.620 1
ATOM 123 C CA . GLY 22 22 ? A 128.918 97.568 130.458 1 1 C GLY 0.620 1
ATOM 124 C C . GLY 22 22 ? A 127.519 97.354 129.942 1 1 C GLY 0.620 1
ATOM 125 O O . GLY 22 22 ? A 126.861 98.251 129.422 1 1 C GLY 0.620 1
ATOM 126 N N . ALA 23 23 ? A 126.955 96.151 130.110 1 1 C ALA 0.650 1
ATOM 127 C CA . ALA 23 23 ? A 125.517 95.999 130.010 1 1 C ALA 0.650 1
ATOM 128 C C . ALA 23 23 ? A 124.813 96.764 131.128 1 1 C ALA 0.650 1
ATOM 129 O O . ALA 23 23 ? A 125.428 97.007 132.160 1 1 C ALA 0.650 1
ATOM 130 C CB . ALA 23 23 ? A 125.095 94.525 129.958 1 1 C ALA 0.650 1
ATOM 131 N N . ASP 24 24 ? A 123.585 97.270 130.866 1 1 C ASP 0.580 1
ATOM 132 C CA . ASP 24 24 ? A 122.820 98.184 131.717 1 1 C ASP 0.580 1
ATOM 133 C C . ASP 24 24 ? A 123.475 99.529 132.062 1 1 C ASP 0.580 1
ATOM 134 O O . ASP 24 24 ? A 122.896 100.385 132.716 1 1 C ASP 0.580 1
ATOM 135 C CB . ASP 24 24 ? A 122.096 97.497 132.908 1 1 C ASP 0.580 1
ATOM 136 C CG . ASP 24 24 ? A 123.038 96.984 133.988 1 1 C ASP 0.580 1
ATOM 137 O OD1 . ASP 24 24 ? A 123.823 97.793 134.551 1 1 C ASP 0.580 1
ATOM 138 O OD2 . ASP 24 24 ? A 122.943 95.762 134.272 1 1 C ASP 0.580 1
ATOM 139 N N . LEU 25 25 ? A 124.665 99.759 131.461 1 1 C LEU 0.600 1
ATOM 140 C CA . LEU 25 25 ? A 125.253 101.057 131.241 1 1 C LEU 0.600 1
ATOM 141 C C . LEU 25 25 ? A 125.841 101.584 132.558 1 1 C LEU 0.600 1
ATOM 142 O O . LEU 25 25 ? A 125.848 102.783 132.815 1 1 C LEU 0.600 1
ATOM 143 C CB . LEU 25 25 ? A 124.296 102.056 130.488 1 1 C LEU 0.600 1
ATOM 144 C CG . LEU 25 25 ? A 123.643 101.679 129.110 1 1 C LEU 0.600 1
ATOM 145 C CD1 . LEU 25 25 ? A 123.043 100.282 128.953 1 1 C LEU 0.600 1
ATOM 146 C CD2 . LEU 25 25 ? A 122.432 102.574 128.780 1 1 C LEU 0.600 1
ATOM 147 N N . SER 26 26 ? A 126.382 100.665 133.411 1 1 C SER 0.590 1
ATOM 148 C CA . SER 26 26 ? A 127.141 100.935 134.644 1 1 C SER 0.590 1
ATOM 149 C C . SER 26 26 ? A 128.421 101.749 134.410 1 1 C SER 0.590 1
ATOM 150 O O . SER 26 26 ? A 128.819 102.556 135.244 1 1 C SER 0.590 1
ATOM 151 C CB . SER 26 26 ? A 127.584 99.630 135.420 1 1 C SER 0.590 1
ATOM 152 O OG . SER 26 26 ? A 126.547 98.982 136.158 1 1 C SER 0.590 1
ATOM 153 N N . GLY 27 27 ? A 129.141 101.524 133.285 1 1 C GLY 0.580 1
ATOM 154 C CA . GLY 27 27 ? A 130.367 102.255 132.947 1 1 C GLY 0.580 1
ATOM 155 C C . GLY 27 27 ? A 130.138 103.531 132.166 1 1 C GLY 0.580 1
ATOM 156 O O . GLY 27 27 ? A 129.122 103.724 131.507 1 1 C GLY 0.580 1
ATOM 157 N N . ALA 28 28 ? A 131.107 104.460 132.221 1 1 C ALA 0.460 1
ATOM 158 C CA . ALA 28 28 ? A 130.973 105.819 131.734 1 1 C ALA 0.460 1
ATOM 159 C C . ALA 28 28 ? A 130.909 106.023 130.203 1 1 C ALA 0.460 1
ATOM 160 O O . ALA 28 28 ? A 131.833 105.669 129.477 1 1 C ALA 0.460 1
ATOM 161 C CB . ALA 28 28 ? A 132.171 106.596 132.311 1 1 C ALA 0.460 1
ATOM 162 N N . GLY 29 29 ? A 129.848 106.674 129.660 1 1 C GLY 0.540 1
ATOM 163 C CA . GLY 29 29 ? A 129.788 106.890 128.221 1 1 C GLY 0.540 1
ATOM 164 C C . GLY 29 29 ? A 128.561 107.592 127.731 1 1 C GLY 0.540 1
ATOM 165 O O . GLY 29 29 ? A 127.838 108.175 128.536 1 1 C GLY 0.540 1
ATOM 166 N N . PRO 30 30 ? A 128.292 107.538 126.415 1 1 C PRO 0.520 1
ATOM 167 C CA . PRO 30 30 ? A 127.087 108.087 125.770 1 1 C PRO 0.520 1
ATOM 168 C C . PRO 30 30 ? A 125.788 107.614 126.378 1 1 C PRO 0.520 1
ATOM 169 O O . PRO 30 30 ? A 124.799 108.349 126.386 1 1 C PRO 0.520 1
ATOM 170 C CB . PRO 30 30 ? A 127.186 107.577 124.317 1 1 C PRO 0.520 1
ATOM 171 C CG . PRO 30 30 ? A 128.681 107.366 124.072 1 1 C PRO 0.520 1
ATOM 172 C CD . PRO 30 30 ? A 129.181 106.891 125.435 1 1 C PRO 0.520 1
ATOM 173 N N . ASP 31 31 ? A 125.805 106.365 126.840 1 1 C ASP 0.470 1
ATOM 174 C CA . ASP 31 31 ? A 124.679 105.616 127.284 1 1 C ASP 0.470 1
ATOM 175 C C . ASP 31 31 ? A 124.486 105.615 128.802 1 1 C ASP 0.470 1
ATOM 176 O O . ASP 31 31 ? A 123.362 105.360 129.247 1 1 C ASP 0.470 1
ATOM 177 C CB . ASP 31 31 ? A 124.962 104.206 126.722 1 1 C ASP 0.470 1
ATOM 178 C CG . ASP 31 31 ? A 124.552 104.042 125.266 1 1 C ASP 0.470 1
ATOM 179 O OD1 . ASP 31 31 ? A 125.469 103.844 124.423 1 1 C ASP 0.470 1
ATOM 180 O OD2 . ASP 31 31 ? A 123.325 104.010 125.013 1 1 C ASP 0.470 1
ATOM 181 N N . LEU 32 32 ? A 125.501 105.931 129.630 1 1 C LEU 0.670 1
ATOM 182 C CA . LEU 32 32 ? A 125.504 105.943 131.107 1 1 C LEU 0.670 1
ATOM 183 C C . LEU 32 32 ? A 124.158 106.204 131.809 1 1 C LEU 0.670 1
ATOM 184 O O . LEU 32 32 ? A 123.519 107.232 131.598 1 1 C LEU 0.670 1
ATOM 185 C CB . LEU 32 32 ? A 126.546 106.979 131.626 1 1 C LEU 0.670 1
ATOM 186 C CG . LEU 32 32 ? A 126.807 106.999 133.159 1 1 C LEU 0.670 1
ATOM 187 C CD1 . LEU 32 32 ? A 127.447 105.698 133.666 1 1 C LEU 0.670 1
ATOM 188 C CD2 . LEU 32 32 ? A 127.679 108.185 133.618 1 1 C LEU 0.670 1
ATOM 189 N N . THR 33 33 ? A 123.719 105.240 132.640 1 1 C THR 0.650 1
ATOM 190 C CA . THR 33 33 ? A 122.414 105.254 133.291 1 1 C THR 0.650 1
ATOM 191 C C . THR 33 33 ? A 122.418 106.171 134.533 1 1 C THR 0.650 1
ATOM 192 O O . THR 33 33 ? A 123.464 106.231 135.237 1 1 C THR 0.650 1
ATOM 193 C CB . THR 33 33 ? A 122.002 103.852 133.749 1 1 C THR 0.650 1
ATOM 194 O OG1 . THR 33 33 ? A 121.816 102.963 132.655 1 1 C THR 0.650 1
ATOM 195 C CG2 . THR 33 33 ? A 120.659 103.849 134.491 1 1 C THR 0.650 1
ATOM 196 O OXT . THR 33 33 ? A 121.354 106.791 134.816 1 1 C THR 0.650 1
#
#
loop_
_atom_type.symbol
C
N
O
S
#
#
loop_
_ma_qa_metric.id
_ma_qa_metric.name
_ma_qa_metric.description
_ma_qa_metric.type
_ma_qa_metric.mode
_ma_qa_metric.type_other_details
_ma_qa_metric.software_group_id
1 QMEANDisCo 'Predicted accuracy according to all-atom lDDT in [0,1].'
'pLDDT all-atom in [0,1]' local . 5
2 QMEANDisCo 'Predicted accuracy according to all-atom lDDT in [0,1].'
'pLDDT all-atom in [0,1]' global . 5
3 GMQE
'Global Model Quality Estimate of the model accuracy, calculated by SWISS-MODEL.'
'normalized score' global . 6
#
#
loop_
_ma_qa_metric_global.ordinal_id
_ma_qa_metric_global.model_id
_ma_qa_metric_global.metric_id
_ma_qa_metric_global.metric_value
1 1 2 0.636
2 1 3 0.574
#
#
loop_
_ma_qa_metric_local.ordinal_id
_ma_qa_metric_local.model_id
_ma_qa_metric_local.label_asym_id
_ma_qa_metric_local.label_seq_id
_ma_qa_metric_local.label_comp_id
_ma_qa_metric_local.metric_id
_ma_qa_metric_local.metric_value
1 1 A 5 ASP 1 0.580
2 1 A 6 SER 1 0.690
3 1 A 7 ALA 1 0.740
4 1 A 8 ALA 1 0.740
5 1 A 9 ALA 1 0.720
6 1 A 10 GLU 1 0.680
7 1 A 11 GLU 1 0.720
8 1 A 12 VAL 1 0.720
9 1 A 13 PHE 1 0.650
10 1 A 14 GLU 1 0.670
11 1 A 15 SER 1 0.720
12 1 A 16 ASN 1 0.640
13 1 A 17 CYS 1 0.670
14 1 A 18 ALA 1 0.710
15 1 A 19 SER 1 0.630
16 1 A 20 CYS 1 0.600
17 1 A 21 HIS 1 0.640
18 1 A 22 GLY 1 0.620
19 1 A 23 ALA 1 0.650
20 1 A 24 ASP 1 0.580
21 1 A 25 LEU 1 0.600
22 1 A 26 SER 1 0.590
23 1 A 27 GLY 1 0.580
24 1 A 28 ALA 1 0.460
25 1 A 29 GLY 1 0.540
26 1 A 30 PRO 1 0.520
27 1 A 31 ASP 1 0.470
28 1 A 32 LEU 1 0.670
29 1 A 33 THR 1 0.650
#
#
loop_
_pdbx_data_usage.id
_pdbx_data_usage.type
_pdbx_data_usage.details
_pdbx_data_usage.url
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