data_SMR-b35ef9fd45b1d165ba648a25c4109ca5_1
_entry.id SMR-b35ef9fd45b1d165ba648a25c4109ca5_1
_struct.entry_id SMR-b35ef9fd45b1d165ba648a25c4109ca5_1
_struct.pdbx_model_details
;This model was generated unsupervised by the SWISS-MODEL homology-modelling pipeline for the SWISS-MODEL Repository, a database of annotated 3D protein structure models. The modelled monomer covers following UniProtKB entries:

  - P85245/ CYVG_VIOBI, Cyclotide vibi-G

Estimated model accuracy of this model is 0.747, calculated by SWISS-MODEL as Global Model Quality Estimate (GMQE).
;
_struct.pdbx_structure_determination_methodology computational
_struct.title 'Model for UniProtKB entries P85245'
_audit_conform.dict_location https://raw.githubusercontent.com/ihmwg/ModelCIF/80e1e22/dist/mmcif_ma.dic
_audit_conform.dict_name mmcif_ma.dic
_audit_conform.dict_version 1.4.7
#
loop_
_citation.id
_citation.title
_citation.journal_abbrev
_citation.journal_volume
_citation.page_first
_citation.page_last
_citation.year
_citation.pdbx_database_id_PubMed
_citation.pdbx_database_id_DOI
primary 'The SWISS-MODEL Repository - new features and functionality'
'Nucleic Acids Res.' 45 D313 D319 2017 27899672 10.1093/nar/gkw1132
2 'SWISS-MODEL: homology modelling of protein structures and complexes'
'Nucleic Acids Res.' 46 W296 W303 2018 29788355 10.1093/nar/gky427
3 'ProMod3 - A versatile homology modelling toolbox' 'PLoS Comput. Biol.' 17(1)
1 18 2021 33507980 10.1371/journal.pcbi.1008667
4 'QMEANDisCo - distance constraints applied on model quality estimation'
Bioinformatics 36 1765 1771 2020 31697312 10.1093/bioinformatics/btz828
5
'OpenStructure: an integrated software framework for computational structural biology'
'Acta Crystallogr., Sect. D: Biol. Crystallogr.' 69 701 709 2013 23633579
10.1107/S0907444913007051
6 'BLAST+: architecture and applications' 'BMC Bioinf.' 10 421 . 2009 20003500
10.1186/1471-2105-10-421
7 'HH-suite3 for fast remote homology detection and deep protein annotation'
'BMC Bioinf.' 20 473 . 2019 31521110 10.1186/s12859-019-3019-7
#
#
loop_
_citation_author.citation_id
_citation_author.name
_citation_author.ordinal
primary 'Bienert, S.' 1
primary 'Waterhouse, A.' 2
primary 'de Beer, T.A.P.' 3
primary 'Tauriello, G.' 4
primary 'Studer, G.' 5
primary 'Bordoli, L.' 6
primary 'Schwede, T.' 7
2 'Waterhouse, A.' 8
2 'Bertoni, M.' 9
2 'Bienert, S.' 10
2 'Studer, G.' 11
2 'Tauriello, G.' 12
2 'Gumienny, R.' 13
2 'Heer, F.T.' 14
2 'de Beer, T.A.P.' 15
2 'Rempfer, C.' 16
2 'Bordoli, L.' 17
2 'Lepore, R.' 18
2 'Schwede, T.' 19
3 'Studer, G.' 20
3 'Tauriello, G.' 21
3 'Bienert, S.' 22
3 'Biasini, M.' 23
3 'Johner, N.' 24
3 'Schwede, T.' 25
4 'Studer, G.' 26
4 'Rempfer, C.' 27
4 'Waterhouse, A.M.' 28
4 'Gumienny, R.' 29
4 'Haas, J.' 30
4 'Schwede, T.' 31
5 'Biasini, M.' 32
5 'Schmidt, T.' 33
5 'Bienert, S.' 34
5 'Mariani, V.' 35
5 'Studer, G.' 36
5 'Haas, J.' 37
5 'Johner, N.' 38
5 'Schenk, A.D.' 39
5 'Philippsen, A.' 40
5 'Schwede, T.' 41
6 'Camacho, C.' 42
6 'Coulouris, G.' 43
6 'Avagyan, V.' 44
6 'Ma, N.' 45
6 'Papadopoulos, J.' 46
6 'Bealer, K.' 47
6 'Madden, T.L.' 48
7 'Steinegger, M.' 49
7 'Meier, M.' 50
7 'Mirdita, M.' 51
7 'Vohringer, H.' 52
7 'Haunsberger, S.J.' 53
7 'Soding, J.' 54
#
#
loop_
_software.pdbx_ordinal
_software.name
_software.classification
_software.description
_software.version
_software.type
_software.location
_software.citation_id
1 SWISS-MODEL 'model building' 'Homology modelling web service' 2025-06.3
package https://swissmodel.expasy.org 2
2 ProMod3 'model building' 'Modular homology modelling engine' 3.5.0 library
https://git.scicore.unibas.ch/schwede/ProMod3 3
3 QMEAN 'model building' 'QMEAN - Qualitative Model Energy ANalysis' 4.4.0
library https://git.scicore.unibas.ch/schwede/QMEAN 4
4 OpenStructure 'data processing'
'Open-Source Computational Structural Biology Framework' 2.10.0 package
https://openstructure.org/ 5
5 BLAST 'data collection' . 2.14.1 package https://blast.ncbi.nlm.nih.gov 6
6 HH-suite 'data collection' 'HH-suite3 for sensitive sequence searching' 3.2.0
package https://github.com/soedinglab/hh-suite 7
#
#
loop_
_ma_software_group.ordinal_id
_ma_software_group.group_id
_ma_software_group.software_id
_ma_software_group.parameter_group_id
1 1 6 .
2 2 1 .
3 2 4 .
4 2 5 .
5 2 6 .
6 3 1 .
7 3 4 .
8 4 1 .
9 4 2 .
10 4 4 .
11 5 3 .
12 6 1 .
13 6 3 .
14 6 4 .
#
#
loop_
_audit_author.name
_audit_author.pdbx_ordinal
'Bienert, S.' 1
'Waterhouse, A.' 2
'de Beer, T.A.P.' 3
'Tauriello, G.' 4
'Studer, G.' 5
'Bordoli, L.' 6
'Schwede, T.' 7
#
#
loop_
_chem_comp.id
_chem_comp.type
_chem_comp.name
_chem_comp.formula
_chem_comp.formula_weight
_chem_comp.ma_provenance
ALA 'L-peptide linking' ALANINE 'C3 H7 N O2' 89.094 'CCD Core'
ASN 'L-peptide linking' ASPARAGINE 'C4 H8 N2 O3' 132.119 'CCD Core'
CYS 'L-peptide linking' CYSTEINE 'C3 H7 N O2 S' 121.154 'CCD Core'
GLU 'L-peptide linking' 'GLUTAMIC ACID' 'C5 H9 N O4' 147.130 'CCD Core'
GLY 'peptide linking' GLYCINE 'C2 H5 N O2' 75.067 'CCD Core'
ILE 'L-peptide linking' ISOLEUCINE 'C6 H13 N O2' 131.175 'CCD Core'
LEU 'L-peptide linking' LEUCINE 'C6 H13 N O2' 131.175 'CCD Core'
LYS 'L-peptide linking' LYSINE 'C6 H15 N2 O2 1' 147.198 'CCD Core'
PHE 'L-peptide linking' PHENYLALANINE 'C9 H11 N O2' 165.192 'CCD Core'
PRO 'L-peptide linking' PROLINE 'C5 H9 N O2' 115.132 'CCD Core'
SER 'L-peptide linking' SERINE 'C3 H7 N O3' 105.093 'CCD Core'
THR 'L-peptide linking' THREONINE 'C4 H9 N O3' 119.120 'CCD Core'
TYR 'L-peptide linking' TYROSINE 'C9 H11 N O3' 181.191 'CCD Core'
VAL 'L-peptide linking' VALINE 'C5 H11 N O2' 117.148 'CCD Core'
#
#
loop_
_entity.id
_entity.type
_entity.src_method
_entity.pdbx_description
_entity.formula_weight
_entity.pdbx_number_of_molecules
_entity.details
1 polymer man . 3790.334 1 .
#
#
loop_
_struct_ref.id
_struct_ref.entity_id
_struct_ref.db_name
_struct_ref.db_code
_struct_ref.pdbx_db_accession
_struct_ref.pdbx_align_begin
_struct_ref.pdbx_seq_one_letter_code
_struct_ref.details
1 1 UNP CYVG_VIOBI P85245 1 GTFPCGESCVFIPCLTSAIGCSCKSKVCYKN 'Cyclotide vibi-G'
#
#
loop_
_struct_ref_seq.align_id
_struct_ref_seq.ref_id
_struct_ref_seq.seq_align_beg
_struct_ref_seq.seq_align_end
_struct_ref_seq.db_align_beg
_struct_ref_seq.db_align_end
1 1 1 31 1 31
#
#
loop_
_ma_target_ref_db_details.target_entity_id
_ma_target_ref_db_details.db_name
_ma_target_ref_db_details.db_name_other_details
_ma_target_ref_db_details.db_code
_ma_target_ref_db_details.db_accession
_ma_target_ref_db_details.seq_db_isoform
_ma_target_ref_db_details.seq_db_align_begin
_ma_target_ref_db_details.seq_db_align_end
_ma_target_ref_db_details.ncbi_taxonomy_id
_ma_target_ref_db_details.organism_scientific
_ma_target_ref_db_details.seq_db_sequence_version_date
_ma_target_ref_db_details.seq_db_sequence_checksum
_ma_target_ref_db_details.is_primary
1 UNP . CYVG_VIOBI P85245 . 1 31 214529 'Viola biflora (Yellow wood violet)'
2008-06-10 96301A52F943A2B4 .
#
#
loop_
_entity_poly.entity_id
_entity_poly.type
_entity_poly.nstd_linkage
_entity_poly.nstd_monomer
_entity_poly.pdbx_strand_id
_entity_poly.pdbx_seq_one_letter_code
_entity_poly.pdbx_seq_one_letter_code_can
1 polypeptide(L) no no A GTFPCGESCVFIPCLTSAIGCSCKSKVCYKN
GTFPCGESCVFIPCLTSAIGCSCKSKVCYKN
#
#
loop_
_entity_poly_seq.entity_id
_entity_poly_seq.num
_entity_poly_seq.mon_id
_entity_poly_seq.hetero
1 1 GLY .
1 2 THR .
1 3 PHE .
1 4 PRO .
1 5 CYS .
1 6 GLY .
1 7 GLU .
1 8 SER .
1 9 CYS .
1 10 VAL .
1 11 PHE .
1 12 ILE .
1 13 PRO .
1 14 CYS .
1 15 LEU .
1 16 THR .
1 17 SER .
1 18 ALA .
1 19 ILE .
1 20 GLY .
1 21 CYS .
1 22 SER .
1 23 CYS .
1 24 LYS .
1 25 SER .
1 26 LYS .
1 27 VAL .
1 28 CYS .
1 29 TYR .
1 30 LYS .
1 31 ASN .
#
#
loop_
_struct_asym.id
_struct_asym.entity_id
_struct_asym.details
A 1 .
#
#
loop_
_pdbx_poly_seq_scheme.asym_id
_pdbx_poly_seq_scheme.entity_id
_pdbx_poly_seq_scheme.seq_id
_pdbx_poly_seq_scheme.mon_id
_pdbx_poly_seq_scheme.pdb_seq_num
_pdbx_poly_seq_scheme.auth_seq_num
_pdbx_poly_seq_scheme.pdb_mon_id
_pdbx_poly_seq_scheme.auth_mon_id
_pdbx_poly_seq_scheme.pdb_strand_id
_pdbx_poly_seq_scheme.pdb_ins_code
A 1 1 GLY 1 ? ? ? A .
A 1 2 THR 2 2 THR THR A .
A 1 3 PHE 3 3 PHE PHE A .
A 1 4 PRO 4 4 PRO PRO A .
A 1 5 CYS 5 5 CYS CYS A .
A 1 6 GLY 6 6 GLY GLY A .
A 1 7 GLU 7 7 GLU GLU A .
A 1 8 SER 8 8 SER SER A .
A 1 9 CYS 9 9 CYS CYS A .
A 1 10 VAL 10 10 VAL VAL A .
A 1 11 PHE 11 11 PHE PHE A .
A 1 12 ILE 12 12 ILE ILE A .
A 1 13 PRO 13 13 PRO PRO A .
A 1 14 CYS 14 14 CYS CYS A .
A 1 15 LEU 15 15 LEU LEU A .
A 1 16 THR 16 16 THR THR A .
A 1 17 SER 17 17 SER SER A .
A 1 18 ALA 18 18 ALA ALA A .
A 1 19 ILE 19 19 ILE ILE A .
A 1 20 GLY 20 20 GLY GLY A .
A 1 21 CYS 21 21 CYS CYS A .
A 1 22 SER 22 22 SER SER A .
A 1 23 CYS 23 23 CYS CYS A .
A 1 24 LYS 24 24 LYS LYS A .
A 1 25 SER 25 25 SER SER A .
A 1 26 LYS 26 26 LYS LYS A .
A 1 27 VAL 27 27 VAL VAL A .
A 1 28 CYS 28 28 CYS CYS A .
A 1 29 TYR 29 29 TYR TYR A .
A 1 30 LYS 30 30 LYS LYS A .
A 1 31 ASN 31 31 ASN ASN A .
#
#
loop_
_ma_data.id
_ma_data.name
_ma_data.content_type
_ma_data.content_type_other_details
1
'Cyclotide hyen-D {PDB ID=7rii, label_asym_id=A, auth_asym_id=A, SMTL ID=7rii.1.A}'
'template structure' .
2 . target .
3 'Target-template alignment by HHblits to 7rii, label_asym_id=A'
'target-template alignment' .
4 'model 1' 'model coordinates' .
5 SMTL 'reference database' .
6 PDB 'reference database' .
7 'Template search output' other 'Results of the sequence search'
#
#
loop_
_ma_data_group.ordinal_id
_ma_data_group.group_id
_ma_data_group.data_id
1 1 2
2 1 5
3 1 6
4 2 7
5 3 2
6 3 1
7 3 3
8 4 1
9 4 3
10 5 4
#
#
loop_
_ma_data_ref_db.data_id
_ma_data_ref_db.name
_ma_data_ref_db.location_url
_ma_data_ref_db.version
_ma_data_ref_db.release_date
5 SMTL https://swissmodel.expasy.org/templates/ . 2025-06-25
6 PDB https://www.wwpdb.org . 2025-06-20
#
#
loop_
_ma_target_entity.entity_id
_ma_target_entity.data_id
_ma_target_entity.origin
1 2 'reference database'
#
#
loop_
_ma_target_entity_instance.asym_id
_ma_target_entity_instance.entity_id
_ma_target_entity_instance.details
A 1 .
#
#
loop_
_ma_template_trans_matrix.id
_ma_template_trans_matrix.rot_matrix[1][1]
_ma_template_trans_matrix.rot_matrix[2][1]
_ma_template_trans_matrix.rot_matrix[3][1]
_ma_template_trans_matrix.rot_matrix[1][2]
_ma_template_trans_matrix.rot_matrix[2][2]
_ma_template_trans_matrix.rot_matrix[3][2]
_ma_template_trans_matrix.rot_matrix[1][3]
_ma_template_trans_matrix.rot_matrix[2][3]
_ma_template_trans_matrix.rot_matrix[3][3]
_ma_template_trans_matrix.tr_vector[1]
_ma_template_trans_matrix.tr_vector[2]
_ma_template_trans_matrix.tr_vector[3]
1 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000
1.000000 0 0 0
#
#
loop_
_ma_template_details.ordinal_id
_ma_template_details.template_id
_ma_template_details.template_origin
_ma_template_details.template_entity_type
_ma_template_details.template_trans_matrix_id
_ma_template_details.template_data_id
_ma_template_details.target_asym_id
_ma_template_details.template_label_asym_id
_ma_template_details.template_label_entity_id
_ma_template_details.template_model_num
_ma_template_details.template_auth_asym_id
1 1 'reference database' polymer 1 1 A A 1 1 A
#
#
loop_
_ma_template_poly.template_id
_ma_template_poly.seq_one_letter_code
_ma_template_poly.seq_one_letter_code_can
1 GFPCGESCVYLPCFTAAIGCSCKSKVCYKN GFPCGESCVYLPCFTAAIGCSCKSKVCYKN
#
#
loop_
_ma_template_poly_segment.id
_ma_template_poly_segment.template_id
_ma_template_poly_segment.residue_number_begin
_ma_template_poly_segment.residue_number_end
1 1 1 30
#
#
loop_
_ma_template_ref_db_details.template_id
_ma_template_ref_db_details.db_name
_ma_template_ref_db_details.db_name_other_details
_ma_template_ref_db_details.db_accession_code
_ma_template_ref_db_details.db_version_date
1 PDB . 7rii 2024-10-23
#
#
loop_
_ma_target_template_poly_mapping.id
_ma_target_template_poly_mapping.template_segment_id
_ma_target_template_poly_mapping.target_asym_id
_ma_target_template_poly_mapping.target_seq_id_begin
_ma_target_template_poly_mapping.target_seq_id_end
1 1 A 1 31
#
#
loop_
_ma_alignment_info.alignment_id
_ma_alignment_info.data_id
_ma_alignment_info.software_group_id
_ma_alignment_info.alignment_length
_ma_alignment_info.alignment_type
_ma_alignment_info.alignment_mode
1 3 1 31 'target-template pairwise alignment' local
#
#
loop_
_ma_alignment_details.ordinal_id
_ma_alignment_details.alignment_id
_ma_alignment_details.template_segment_id
_ma_alignment_details.target_asym_id
_ma_alignment_details.score_type
_ma_alignment_details.score_type_other_details
_ma_alignment_details.score_value
_ma_alignment_details.percent_sequence_identity
_ma_alignment_details.sequence_identity_denominator
_ma_alignment_details.sequence_identity_denominator_other_details
1 1 1 A 'HHblits e-value' . 3.6e-19 83.333
'Number of aligned residue pairs (not including the gaps)' .
#
#
loop_
_ma_alignment.ordinal_id
_ma_alignment.alignment_id
_ma_alignment.target_template_flag
_ma_alignment.sequence
1 1 1 GTFPCGESCVFIPCLTSAIGCSCKSKVCYKN
2 1 2 -GFPCGESCVYLPCFTAAIGCSCKSKVCYKN
#
#
loop_
_ma_protocol_step.ordinal_id
_ma_protocol_step.protocol_id
_ma_protocol_step.step_id
_ma_protocol_step.method_type
_ma_protocol_step.step_name
_ma_protocol_step.details
_ma_protocol_step.software_group_id
_ma_protocol_step.input_data_group_id
_ma_protocol_step.output_data_group_id
1 1 1 'template search' 'template search' 'SWISS-MODEL template search in PDB' 2
1 2
2 1 2 'template selection' 'template selection'
'Automatic template selection by SWISS-MODEL' 3 2 4
3 1 3 modeling 'homology modeling'
'SWISS-MODEL auto-model mode using ProMod3 on 7rii.1' 4 3 5
#
#
loop_
_ma_model_list.ordinal_id
_ma_model_list.model_name
_ma_model_list.data_id
_ma_model_list.model_type
_ma_model_list.model_type_other_details
1 'model 1' 4 'Homology model' .
#
#
loop_
_ma_model_group.id
_ma_model_group.name
_ma_model_group.details
1 . .
#
#
loop_
_ma_model_group_link.group_id
_ma_model_group_link.model_id
1 1
#
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_alt_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.auth_seq_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.label_entity_id
_atom_site.auth_asym_id
_atom_site.auth_comp_id
_atom_site.B_iso_or_equiv
_atom_site.pdbx_PDB_model_num
ATOM 1 N N . THR 2 2 ? A 7.424 11.376 0.191 1 1 A THR 0.530 1
ATOM 2 C CA . THR 2 2 ? A 8.586 12.268 0.435 1 1 A THR 0.530 1
ATOM 3 C C . THR 2 2 ? A 8.881 12.467 1.891 1 1 A THR 0.530 1
ATOM 4 O O . THR 2 2 ? A 10.033 12.702 2.225 1 1 A THR 0.530 1
ATOM 5 C CB . THR 2 2 ? A 8.358 13.592 -0.251 1 1 A THR 0.530 1
ATOM 6 O OG1 . THR 2 2 ? A 8.140 13.452 -1.655 1 1 A THR 0.530 1
ATOM 7 C CG2 . THR 2 2 ? A 9.536 14.574 -0.095 1 1 A THR 0.530 1
ATOM 8 N N . PHE 3 3 ? A 7.911 12.352 2.839 1 1 A PHE 0.640 1
ATOM 9 C CA . PHE 3 3 ? A 8.207 12.594 4.236 1 1 A PHE 0.640 1
ATOM 10 C C . PHE 3 3 ? A 8.339 11.289 5.019 1 1 A PHE 0.640 1
ATOM 11 O O . PHE 3 3 ? A 7.485 10.415 4.850 1 1 A PHE 0.640 1
ATOM 12 C CB . PHE 3 3 ? A 7.152 13.466 4.954 1 1 A PHE 0.640 1
ATOM 13 C CG . PHE 3 3 ? A 7.062 14.834 4.342 1 1 A PHE 0.640 1
ATOM 14 C CD1 . PHE 3 3 ? A 7.975 15.848 4.655 1 1 A PHE 0.640 1
ATOM 15 C CD2 . PHE 3 3 ? A 6.049 15.118 3.430 1 1 A PHE 0.640 1
ATOM 16 C CE1 . PHE 3 3 ? A 7.904 17.100 4.032 1 1 A PHE 0.640 1
ATOM 17 C CE2 . PHE 3 3 ? A 6.029 16.324 2.729 1 1 A PHE 0.640 1
ATOM 18 C CZ . PHE 3 3 ? A 6.943 17.326 3.044 1 1 A PHE 0.640 1
ATOM 19 N N . PRO 4 4 ? A 9.355 11.046 5.855 1 1 A PRO 0.860 1
ATOM 20 C CA . PRO 4 4 ? A 9.464 9.831 6.643 1 1 A PRO 0.860 1
ATOM 21 C C . PRO 4 4 ? A 8.439 9.806 7.744 1 1 A PRO 0.860 1
ATOM 22 O O . PRO 4 4 ? A 8.087 10.850 8.287 1 1 A PRO 0.860 1
ATOM 23 C CB . PRO 4 4 ? A 10.893 9.852 7.214 1 1 A PRO 0.860 1
ATOM 24 C CG . PRO 4 4 ? A 11.265 11.336 7.252 1 1 A PRO 0.860 1
ATOM 25 C CD . PRO 4 4 ? A 10.496 11.928 6.071 1 1 A PRO 0.860 1
ATOM 26 N N . CYS 5 5 ? A 7.954 8.606 8.091 1 1 A CYS 0.850 1
ATOM 27 C CA . CYS 5 5 ? A 6.909 8.444 9.083 1 1 A CYS 0.850 1
ATOM 28 C C . CYS 5 5 ? A 7.438 8.020 10.433 1 1 A CYS 0.850 1
ATOM 29 O O . CYS 5 5 ? A 6.678 7.697 11.341 1 1 A CYS 0.850 1
ATOM 30 C CB . CYS 5 5 ? A 5.886 7.414 8.584 1 1 A CYS 0.850 1
ATOM 31 S SG . CYS 5 5 ? A 5.123 7.993 7.045 1 1 A CYS 0.850 1
ATOM 32 N N . GLY 6 6 ? A 8.778 8.008 10.597 1 1 A GLY 0.860 1
ATOM 33 C CA . GLY 6 6 ? A 9.412 7.647 11.859 1 1 A GLY 0.860 1
ATOM 34 C C . GLY 6 6 ? A 9.394 6.180 12.171 1 1 A GLY 0.860 1
ATOM 35 O O . GLY 6 6 ? A 9.324 5.788 13.331 1 1 A GLY 0.860 1
ATOM 36 N N . GLU 7 7 ? A 9.475 5.333 11.131 1 1 A GLU 0.800 1
ATOM 37 C CA . GLU 7 7 ? A 9.399 3.905 11.297 1 1 A GLU 0.800 1
ATOM 38 C C . GLU 7 7 ? A 10.338 3.263 10.295 1 1 A GLU 0.800 1
ATOM 39 O O . GLU 7 7 ? A 10.358 3.594 9.109 1 1 A GLU 0.800 1
ATOM 40 C CB . GLU 7 7 ? A 7.939 3.404 11.155 1 1 A GLU 0.800 1
ATOM 41 C CG . GLU 7 7 ? A 7.714 1.902 11.471 1 1 A GLU 0.800 1
ATOM 42 C CD . GLU 7 7 ? A 6.268 1.437 11.275 1 1 A GLU 0.800 1
ATOM 43 O OE1 . GLU 7 7 ? A 5.845 0.470 11.957 1 1 A GLU 0.800 1
ATOM 44 O OE2 . GLU 7 7 ? A 5.560 2.006 10.407 1 1 A GLU 0.800 1
ATOM 45 N N . SER 8 8 ? A 11.198 2.350 10.787 1 1 A SER 0.740 1
ATOM 46 C CA . SER 8 8 ? A 12.007 1.470 9.958 1 1 A SER 0.740 1
ATOM 47 C C . SER 8 8 ? A 11.181 0.352 9.362 1 1 A SER 0.740 1
ATOM 48 O O . SER 8 8 ? A 10.381 -0.263 10.055 1 1 A SER 0.740 1
ATOM 49 C CB . SER 8 8 ? A 13.133 0.815 10.805 1 1 A SER 0.740 1
ATOM 50 O OG . SER 8 8 ? A 13.943 -0.103 10.066 1 1 A SER 0.740 1
ATOM 51 N N . CYS 9 9 ? A 11.431 0.005 8.085 1 1 A CYS 0.770 1
ATOM 52 C CA . CYS 9 9 ? A 10.928 -1.230 7.507 1 1 A CYS 0.770 1
ATOM 53 C C . CYS 9 9 ? A 12.090 -2.023 6.947 1 1 A CYS 0.770 1
ATOM 54 O O . CYS 9 9 ? A 12.015 -2.645 5.890 1 1 A CYS 0.770 1
ATOM 55 C CB . CYS 9 9 ? A 9.802 -1.052 6.457 1 1 A CYS 0.770 1
ATOM 56 S SG . CYS 9 9 ? A 10.189 0.151 5.158 1 1 A CYS 0.770 1
ATOM 57 N N . VAL 10 10 ? A 13.227 -2.027 7.681 1 1 A VAL 0.710 1
ATOM 58 C CA . VAL 10 10 ? A 14.349 -2.928 7.433 1 1 A VAL 0.710 1
ATOM 59 C C . VAL 10 10 ? A 13.952 -4.394 7.530 1 1 A VAL 0.710 1
ATOM 60 O O . VAL 10 10 ? A 14.375 -5.209 6.712 1 1 A VAL 0.710 1
ATOM 61 C CB . VAL 10 10 ? A 15.510 -2.642 8.391 1 1 A VAL 0.710 1
ATOM 62 C CG1 . VAL 10 10 ? A 16.623 -3.712 8.318 1 1 A VAL 0.710 1
ATOM 63 C CG2 . VAL 10 10 ? A 16.124 -1.265 8.067 1 1 A VAL 0.710 1
ATOM 64 N N . PHE 11 11 ? A 13.112 -4.735 8.531 1 1 A PHE 0.640 1
ATOM 65 C CA . PHE 11 11 ? A 12.627 -6.082 8.755 1 1 A PHE 0.640 1
ATOM 66 C C . PHE 11 11 ? A 11.113 -6.098 8.803 1 1 A PHE 0.640 1
ATOM 67 O O . PHE 11 11 ? A 10.456 -6.735 7.986 1 1 A PHE 0.640 1
ATOM 68 C CB . PHE 11 11 ? A 13.168 -6.678 10.080 1 1 A PHE 0.640 1
ATOM 69 C CG . PHE 11 11 ? A 14.655 -6.871 10.030 1 1 A PHE 0.640 1
ATOM 70 C CD1 . PHE 11 11 ? A 15.205 -7.902 9.261 1 1 A PHE 0.640 1
ATOM 71 C CD2 . PHE 11 11 ? A 15.526 -6.033 10.737 1 1 A PHE 0.640 1
ATOM 72 C CE1 . PHE 11 11 ? A 16.586 -8.088 9.186 1 1 A PHE 0.640 1
ATOM 73 C CE2 . PHE 11 11 ? A 16.912 -6.211 10.666 1 1 A PHE 0.640 1
ATOM 74 C CZ . PHE 11 11 ? A 17.441 -7.241 9.889 1 1 A PHE 0.640 1
ATOM 75 N N . ILE 12 12 ? A 10.511 -5.410 9.792 1 1 A ILE 0.660 1
ATOM 76 C CA . ILE 12 12 ? A 9.074 -5.286 9.953 1 1 A ILE 0.660 1
ATOM 77 C C . ILE 12 12 ? A 8.387 -4.554 8.796 1 1 A ILE 0.660 1
ATOM 78 O O . ILE 12 12 ? A 9.027 -3.737 8.138 1 1 A ILE 0.660 1
ATOM 79 C CB . ILE 12 12 ? A 8.722 -4.625 11.286 1 1 A ILE 0.660 1
ATOM 80 C CG1 . ILE 12 12 ? A 9.196 -3.153 11.354 1 1 A ILE 0.660 1
ATOM 81 C CG2 . ILE 12 12 ? A 9.284 -5.491 12.440 1 1 A ILE 0.660 1
ATOM 82 C CD1 . ILE 12 12 ? A 8.660 -2.385 12.568 1 1 A ILE 0.660 1
ATOM 83 N N . PRO 13 13 ? A 7.126 -4.781 8.453 1 1 A PRO 0.770 1
ATOM 84 C CA . PRO 13 13 ? A 6.362 -3.843 7.647 1 1 A PRO 0.770 1
ATOM 85 C C . PRO 13 13 ? A 6.088 -2.534 8.349 1 1 A PRO 0.770 1
ATOM 86 O O . PRO 13 13 ? A 6.293 -2.425 9.551 1 1 A PRO 0.770 1
ATOM 87 C CB . PRO 13 13 ? A 5.060 -4.595 7.366 1 1 A PRO 0.770 1
ATOM 88 C CG . PRO 13 13 ? A 4.855 -5.488 8.593 1 1 A PRO 0.770 1
ATOM 89 C CD . PRO 13 13 ? A 6.279 -5.815 9.038 1 1 A PRO 0.770 1
ATOM 90 N N . CYS 14 14 ? A 5.584 -1.542 7.594 1 1 A CYS 0.810 1
ATOM 91 C CA . CYS 14 14 ? A 5.198 -0.257 8.135 1 1 A CYS 0.810 1
ATOM 92 C C . CYS 14 14 ? A 3.811 -0.344 8.712 1 1 A CYS 0.810 1
ATOM 93 O O . CYS 14 14 ? A 2.830 -0.391 7.969 1 1 A CYS 0.810 1
ATOM 94 C CB . CYS 14 14 ? A 5.150 0.827 7.029 1 1 A CYS 0.810 1
ATOM 95 S SG . CYS 14 14 ? A 6.752 1.055 6.232 1 1 A CYS 0.810 1
ATOM 96 N N . LEU 15 15 ? A 3.676 -0.330 10.052 1 1 A LEU 0.750 1
ATOM 97 C CA . LEU 15 15 ? A 2.379 -0.262 10.694 1 1 A LEU 0.750 1
ATOM 98 C C . LEU 15 15 ? A 1.837 1.154 10.643 1 1 A LEU 0.750 1
ATOM 99 O O . LEU 15 15 ? A 0.637 1.386 10.786 1 1 A LEU 0.750 1
ATOM 100 C CB . LEU 15 15 ? A 2.435 -0.777 12.145 1 1 A LEU 0.750 1
ATOM 101 C CG . LEU 15 15 ? A 2.701 -2.292 12.276 1 1 A LEU 0.750 1
ATOM 102 C CD1 . LEU 15 15 ? A 2.878 -2.673 13.756 1 1 A LEU 0.750 1
ATOM 103 C CD2 . LEU 15 15 ? A 1.586 -3.141 11.635 1 1 A LEU 0.750 1
ATOM 104 N N . THR 16 16 ? A 2.695 2.152 10.331 1 1 A THR 0.770 1
ATOM 105 C CA . THR 16 16 ? A 2.257 3.485 9.900 1 1 A THR 0.770 1
ATOM 106 C C . THR 16 16 ? A 1.510 3.525 8.576 1 1 A THR 0.770 1
ATOM 107 O O . THR 16 16 ? A 1.050 4.583 8.147 1 1 A THR 0.770 1
ATOM 108 C CB . THR 16 16 ? A 3.341 4.542 9.838 1 1 A THR 0.770 1
ATOM 109 O OG1 . THR 16 16 ? A 4.407 4.190 8.950 1 1 A THR 0.770 1
ATOM 110 C CG2 . THR 16 16 ? A 3.931 4.739 11.236 1 1 A THR 0.770 1
ATOM 111 N N . SER 17 17 ? A 1.263 2.365 7.930 1 1 A SER 0.760 1
ATOM 112 C CA . SER 17 17 ? A 0.274 2.193 6.868 1 1 A SER 0.760 1
ATOM 113 C C . SER 17 17 ? A -1.110 2.651 7.281 1 1 A SER 0.760 1
ATOM 114 O O . SER 17 17 ? A -1.871 3.167 6.467 1 1 A SER 0.760 1
ATOM 115 C CB . SER 17 17 ? A 0.186 0.730 6.352 1 1 A SER 0.760 1
ATOM 116 O OG . SER 17 17 ? A -0.304 -0.171 7.351 1 1 A SER 0.760 1
ATOM 117 N N . ALA 18 18 ? A -1.424 2.562 8.595 1 1 A ALA 0.720 1
ATOM 118 C CA . ALA 18 18 ? A -2.628 3.087 9.206 1 1 A ALA 0.720 1
ATOM 119 C C . ALA 18 18 ? A -2.843 4.588 8.982 1 1 A ALA 0.720 1
ATOM 120 O O . ALA 18 18 ? A -3.971 5.069 8.921 1 1 A ALA 0.720 1
ATOM 121 C CB . ALA 18 18 ? A -2.612 2.771 10.718 1 1 A ALA 0.720 1
ATOM 122 N N . ILE 19 19 ? A -1.750 5.367 8.831 1 1 A ILE 0.720 1
ATOM 123 C CA . ILE 19 19 ? A -1.814 6.789 8.531 1 1 A ILE 0.720 1
ATOM 124 C C . ILE 19 19 ? A -1.304 7.090 7.130 1 1 A ILE 0.720 1
ATOM 125 O O . ILE 19 19 ? A -1.063 8.239 6.748 1 1 A ILE 0.720 1
ATOM 126 C CB . ILE 19 19 ? A -1.155 7.649 9.607 1 1 A ILE 0.720 1
ATOM 127 C CG1 . ILE 19 19 ? A 0.286 7.202 9.940 1 1 A ILE 0.720 1
ATOM 128 C CG2 . ILE 19 19 ? A -2.078 7.623 10.851 1 1 A ILE 0.720 1
ATOM 129 C CD1 . ILE 19 19 ? A 1.044 8.208 10.816 1 1 A ILE 0.720 1
ATOM 130 N N . GLY 20 20 ? A -1.213 6.055 6.270 1 1 A GLY 0.820 1
ATOM 131 C CA . GLY 20 20 ? A -0.938 6.212 4.852 1 1 A GLY 0.820 1
ATOM 132 C C . GLY 20 20 ? A 0.479 6.046 4.422 1 1 A GLY 0.820 1
ATOM 133 O O . GLY 20 20 ? A 0.816 6.401 3.297 1 1 A GLY 0.820 1
ATOM 134 N N . CYS 21 21 ? A 1.355 5.554 5.299 1 1 A CYS 0.840 1
ATOM 135 C CA . CYS 21 21 ? A 2.746 5.358 4.954 1 1 A CYS 0.840 1
ATOM 136 C C . CYS 21 21 ? A 3.015 4.002 4.345 1 1 A CYS 0.840 1
ATOM 137 O O . CYS 21 21 ? A 2.338 3.015 4.617 1 1 A CYS 0.840 1
ATOM 138 C CB . CYS 21 21 ? A 3.648 5.513 6.180 1 1 A CYS 0.840 1
ATOM 139 S SG . CYS 21 21 ? A 3.329 7.071 7.057 1 1 A CYS 0.840 1
ATOM 140 N N . SER 22 22 ? A 4.065 3.915 3.522 1 1 A SER 0.850 1
ATOM 141 C CA . SER 22 22 ? A 4.418 2.677 2.862 1 1 A SER 0.850 1
ATOM 142 C C . SER 22 22 ? A 5.904 2.530 2.923 1 1 A SER 0.850 1
ATOM 143 O O . SER 22 22 ? A 6.634 3.510 3.068 1 1 A SER 0.850 1
ATOM 144 C CB . SER 22 22 ? A 3.987 2.628 1.376 1 1 A SER 0.850 1
ATOM 145 O OG . SER 22 22 ? A 2.565 2.658 1.272 1 1 A SER 0.850 1
ATOM 146 N N . CYS 23 23 ? A 6.399 1.282 2.818 1 1 A CYS 0.830 1
ATOM 147 C CA . CYS 23 23 ? A 7.819 1.008 2.848 1 1 A CYS 0.830 1
ATOM 148 C C . CYS 23 23 ? A 8.480 1.396 1.550 1 1 A CYS 0.830 1
ATOM 149 O O . CYS 23 23 ? A 8.119 0.904 0.483 1 1 A CYS 0.830 1
ATOM 150 C CB . CYS 23 23 ? A 8.116 -0.488 3.134 1 1 A CYS 0.830 1
ATOM 151 S SG . CYS 23 23 ? A 9.872 -0.841 3.430 1 1 A CYS 0.830 1
ATOM 152 N N . LYS 24 24 ? A 9.482 2.285 1.611 1 1 A LYS 0.740 1
ATOM 153 C CA . LYS 24 24 ? A 10.265 2.617 0.455 1 1 A LYS 0.740 1
ATOM 154 C C . LYS 24 24 ? A 11.705 2.419 0.788 1 1 A LYS 0.740 1
ATOM 155 O O . LYS 24 24 ? A 12.334 3.250 1.438 1 1 A LYS 0.740 1
ATOM 156 C CB . LYS 24 24 ? A 10.056 4.081 0.056 1 1 A LYS 0.740 1
ATOM 157 C CG . LYS 24 24 ? A 8.629 4.337 -0.424 1 1 A LYS 0.740 1
ATOM 158 C CD . LYS 24 24 ? A 8.619 5.259 -1.640 1 1 A LYS 0.740 1
ATOM 159 C CE . LYS 24 24 ? A 7.212 5.632 -2.088 1 1 A LYS 0.740 1
ATOM 160 N NZ . LYS 24 24 ? A 7.298 6.632 -3.171 1 1 A LYS 0.740 1
ATOM 161 N N . SER 25 25 ? A 12.255 1.275 0.343 1 1 A SER 0.650 1
ATOM 162 C CA . SER 25 25 ? A 13.647 0.906 0.508 1 1 A SER 0.650 1
ATOM 163 C C . SER 25 25 ? A 14.177 1.039 1.915 1 1 A SER 0.650 1
ATOM 164 O O . SER 25 25 ? A 15.224 1.628 2.155 1 1 A SER 0.650 1
ATOM 165 C CB . SER 25 25 ? A 14.569 1.532 -0.553 1 1 A SER 0.650 1
ATOM 166 O OG . SER 25 25 ? A 14.190 1.025 -1.836 1 1 A SER 0.650 1
ATOM 167 N N . LYS 26 26 ? A 13.412 0.428 2.851 1 1 A LYS 0.700 1
ATOM 168 C CA . LYS 26 26 ? A 13.703 0.232 4.259 1 1 A LYS 0.700 1
ATOM 169 C C . LYS 26 26 ? A 13.294 1.375 5.164 1 1 A LYS 0.700 1
ATOM 170 O O . LYS 26 26 ? A 13.441 1.296 6.383 1 1 A LYS 0.700 1
ATOM 171 C CB . LYS 26 26 ? A 15.155 -0.201 4.523 1 1 A LYS 0.700 1
ATOM 172 C CG . LYS 26 26 ? A 15.504 -1.490 3.775 1 1 A LYS 0.700 1
ATOM 173 C CD . LYS 26 26 ? A 16.942 -1.949 4.030 1 1 A LYS 0.700 1
ATOM 174 C CE . LYS 26 26 ? A 17.236 -3.341 3.473 1 1 A LYS 0.700 1
ATOM 175 N NZ . LYS 26 26 ? A 17.210 -3.300 1.995 1 1 A LYS 0.700 1
ATOM 176 N N . VAL 27 27 ? A 12.672 2.422 4.601 1 1 A VAL 0.810 1
ATOM 177 C CA . VAL 27 27 ? A 12.146 3.533 5.364 1 1 A VAL 0.810 1
ATOM 178 C C . VAL 27 27 ? A 10.665 3.659 5.094 1 1 A VAL 0.810 1
ATOM 179 O O . VAL 27 27 ? A 10.217 3.647 3.948 1 1 A VAL 0.810 1
ATOM 180 C CB . VAL 27 27 ? A 12.846 4.835 5.000 1 1 A VAL 0.810 1
ATOM 181 C CG1 . VAL 27 27 ? A 12.287 6.019 5.821 1 1 A VAL 0.810 1
ATOM 182 C CG2 . VAL 27 27 ? A 14.364 4.694 5.241 1 1 A VAL 0.810 1
ATOM 183 N N . CYS 28 28 ? A 9.840 3.778 6.153 1 1 A CYS 0.840 1
ATOM 184 C CA . CYS 28 28 ? A 8.433 4.089 5.998 1 1 A CYS 0.840 1
ATOM 185 C C . CYS 28 28 ? A 8.235 5.555 5.653 1 1 A CYS 0.840 1
ATOM 186 O O . CYS 28 28 ? A 8.689 6.451 6.365 1 1 A CYS 0.840 1
ATOM 187 C CB . CYS 28 28 ? A 7.633 3.722 7.262 1 1 A CYS 0.840 1
ATOM 188 S SG . CYS 28 28 ? A 7.830 1.963 7.670 1 1 A CYS 0.840 1
ATOM 189 N N . TYR 29 29 ? A 7.550 5.818 4.526 1 1 A TYR 0.810 1
ATOM 190 C CA . TYR 29 29 ? A 7.455 7.126 3.915 1 1 A TYR 0.810 1
ATOM 191 C C . TYR 29 29 ? A 6.028 7.375 3.492 1 1 A TYR 0.810 1
ATOM 192 O O . TYR 29 29 ? A 5.320 6.455 3.114 1 1 A TYR 0.810 1
ATOM 193 C CB . TYR 29 29 ? A 8.288 7.152 2.603 1 1 A TYR 0.810 1
ATOM 194 C CG . TYR 29 29 ? A 9.626 7.784 2.768 1 1 A TYR 0.810 1
ATOM 195 C CD1 . TYR 29 29 ? A 9.721 9.174 2.806 1 1 A TYR 0.810 1
ATOM 196 C CD2 . TYR 29 29 ? A 10.801 7.031 2.803 1 1 A TYR 0.810 1
ATOM 197 C CE1 . TYR 29 29 ? A 10.969 9.795 2.922 1 1 A TYR 0.810 1
ATOM 198 C CE2 . TYR 29 29 ? A 12.051 7.662 2.883 1 1 A TYR 0.810 1
ATOM 199 C CZ . TYR 29 29 ? A 12.132 9.047 2.954 1 1 A TYR 0.810 1
ATOM 200 O OH . TYR 29 29 ? A 13.363 9.717 3.060 1 1 A TYR 0.810 1
ATOM 201 N N . LYS 30 30 ? A 5.615 8.663 3.499 1 1 A LYS 0.610 1
ATOM 202 C CA . LYS 30 30 ? A 4.371 9.082 2.908 1 1 A LYS 0.610 1
ATOM 203 C C . LYS 30 30 ? A 4.517 10.468 2.269 1 1 A LYS 0.610 1
ATOM 204 O O . LYS 30 30 ? A 4.791 11.411 2.995 1 1 A LYS 0.610 1
ATOM 205 C CB . LYS 30 30 ? A 3.295 9.218 3.993 1 1 A LYS 0.610 1
ATOM 206 C CG . LYS 30 30 ? A 1.941 9.600 3.404 1 1 A LYS 0.610 1
ATOM 207 C CD . LYS 30 30 ? A 0.910 9.885 4.485 1 1 A LYS 0.610 1
ATOM 208 C CE . LYS 30 30 ? A -0.459 10.145 3.876 1 1 A LYS 0.610 1
ATOM 209 N NZ . LYS 30 30 ? A -1.448 10.242 4.957 1 1 A LYS 0.610 1
ATOM 210 N N . ASN 31 31 ? A 4.294 10.603 0.939 1 1 A ASN 0.520 1
ATOM 211 C CA . ASN 31 31 ? A 4.127 11.847 0.139 1 1 A ASN 0.520 1
ATOM 212 C C . ASN 31 31 ? A 5.065 13.066 0.272 1 1 A ASN 0.520 1
ATOM 213 O O . ASN 31 31 ? A 5.761 13.181 1.278 1 1 A ASN 0.520 1
ATOM 214 C CB . ASN 31 31 ? A 2.824 12.579 0.368 1 1 A ASN 0.520 1
ATOM 215 C CG . ASN 31 31 ? A 1.670 11.658 0.171 1 1 A ASN 0.520 1
ATOM 216 O OD1 . ASN 31 31 ? A 1.662 10.671 -0.567 1 1 A ASN 0.520 1
ATOM 217 N ND2 . ASN 31 31 ? A 0.605 12.060 0.892 1 1 A ASN 0.520 1
ATOM 218 O OXT . ASN 31 31 ? A 5.154 13.867 -0.708 1 1 A ASN 0.520 1
#
#
loop_
_atom_type.symbol
C
N
O
S
#
#
loop_
_ma_qa_metric.id
_ma_qa_metric.name
_ma_qa_metric.description
_ma_qa_metric.type
_ma_qa_metric.mode
_ma_qa_metric.type_other_details
_ma_qa_metric.software_group_id
1 QMEANDisCo 'Predicted accuracy according to all-atom lDDT in [0,1].'
'pLDDT all-atom in [0,1]' local . 5
2 QMEANDisCo 'Predicted accuracy according to all-atom lDDT in [0,1].'
'pLDDT all-atom in [0,1]' global . 5
3 GMQE
'Global Model Quality Estimate of the model accuracy, calculated by SWISS-MODEL.'
'normalized score' global . 6
#
#
loop_
_ma_qa_metric_global.ordinal_id
_ma_qa_metric_global.model_id
_ma_qa_metric_global.metric_id
_ma_qa_metric_global.metric_value
1 1 2 0.746
2 1 3 0.747
#
#
loop_
_ma_qa_metric_local.ordinal_id
_ma_qa_metric_local.model_id
_ma_qa_metric_local.label_asym_id
_ma_qa_metric_local.label_seq_id
_ma_qa_metric_local.label_comp_id
_ma_qa_metric_local.metric_id
_ma_qa_metric_local.metric_value
1 1 A 2 THR 1 0.530
2 1 A 3 PHE 1 0.640
3 1 A 4 PRO 1 0.860
4 1 A 5 CYS 1 0.850
5 1 A 6 GLY 1 0.860
6 1 A 7 GLU 1 0.800
7 1 A 8 SER 1 0.740
8 1 A 9 CYS 1 0.770
9 1 A 10 VAL 1 0.710
10 1 A 11 PHE 1 0.640
11 1 A 12 ILE 1 0.660
12 1 A 13 PRO 1 0.770
13 1 A 14 CYS 1 0.810
14 1 A 15 LEU 1 0.750
15 1 A 16 THR 1 0.770
16 1 A 17 SER 1 0.760
17 1 A 18 ALA 1 0.720
18 1 A 19 ILE 1 0.720
19 1 A 20 GLY 1 0.820
20 1 A 21 CYS 1 0.840
21 1 A 22 SER 1 0.850
22 1 A 23 CYS 1 0.830
23 1 A 24 LYS 1 0.740
24 1 A 25 SER 1 0.650
25 1 A 26 LYS 1 0.700
26 1 A 27 VAL 1 0.810
27 1 A 28 CYS 1 0.840
28 1 A 29 TYR 1 0.810
29 1 A 30 LYS 1 0.610
30 1 A 31 ASN 1 0.520
#
#
loop_
_pdbx_data_usage.id
_pdbx_data_usage.type
_pdbx_data_usage.details
_pdbx_data_usage.url
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