data_SMR-2f795f470992401a5d75a5fe41248b9b_1
_entry.id SMR-2f795f470992401a5d75a5fe41248b9b_1
_struct.entry_id SMR-2f795f470992401a5d75a5fe41248b9b_1
_struct.pdbx_model_details
;This model was generated unsupervised by the SWISS-MODEL homology-modelling pipeline for the SWISS-MODEL Repository, a database of annotated 3D protein structure models. The modelled monomer covers following UniProtKB entries:

  - P83839/ VODM_VIOOD, Vodo peptide M

Estimated model accuracy of this model is 0.703, calculated by SWISS-MODEL as Global Model Quality Estimate (GMQE).
;
_struct.pdbx_structure_determination_methodology computational
_struct.title 'Model for UniProtKB entries P83839'
_audit_conform.dict_location https://raw.githubusercontent.com/ihmwg/ModelCIF/80e1e22/dist/mmcif_ma.dic
_audit_conform.dict_name mmcif_ma.dic
_audit_conform.dict_version 1.4.7
#
loop_
_citation.id
_citation.title
_citation.journal_abbrev
_citation.journal_volume
_citation.page_first
_citation.page_last
_citation.year
_citation.pdbx_database_id_PubMed
_citation.pdbx_database_id_DOI
primary 'The SWISS-MODEL Repository - new features and functionality'
'Nucleic Acids Res.' 45 D313 D319 2017 27899672 10.1093/nar/gkw1132
2 'SWISS-MODEL: homology modelling of protein structures and complexes'
'Nucleic Acids Res.' 46 W296 W303 2018 29788355 10.1093/nar/gky427
3 'ProMod3 - A versatile homology modelling toolbox' 'PLoS Comput. Biol.' 17(1)
1 18 2021 33507980 10.1371/journal.pcbi.1008667
4 'QMEANDisCo - distance constraints applied on model quality estimation'
Bioinformatics 36 1765 1771 2020 31697312 10.1093/bioinformatics/btz828
5
'OpenStructure: an integrated software framework for computational structural biology'
'Acta Crystallogr., Sect. D: Biol. Crystallogr.' 69 701 709 2013 23633579
10.1107/S0907444913007051
6 'BLAST+: architecture and applications' 'BMC Bioinf.' 10 421 . 2009 20003500
10.1186/1471-2105-10-421
7 'HH-suite3 for fast remote homology detection and deep protein annotation'
'BMC Bioinf.' 20 473 . 2019 31521110 10.1186/s12859-019-3019-7
#
#
loop_
_citation_author.citation_id
_citation_author.name
_citation_author.ordinal
primary 'Bienert, S.' 1
primary 'Waterhouse, A.' 2
primary 'de Beer, T.A.P.' 3
primary 'Tauriello, G.' 4
primary 'Studer, G.' 5
primary 'Bordoli, L.' 6
primary 'Schwede, T.' 7
2 'Waterhouse, A.' 8
2 'Bertoni, M.' 9
2 'Bienert, S.' 10
2 'Studer, G.' 11
2 'Tauriello, G.' 12
2 'Gumienny, R.' 13
2 'Heer, F.T.' 14
2 'de Beer, T.A.P.' 15
2 'Rempfer, C.' 16
2 'Bordoli, L.' 17
2 'Lepore, R.' 18
2 'Schwede, T.' 19
3 'Studer, G.' 20
3 'Tauriello, G.' 21
3 'Bienert, S.' 22
3 'Biasini, M.' 23
3 'Johner, N.' 24
3 'Schwede, T.' 25
4 'Studer, G.' 26
4 'Rempfer, C.' 27
4 'Waterhouse, A.M.' 28
4 'Gumienny, R.' 29
4 'Haas, J.' 30
4 'Schwede, T.' 31
5 'Biasini, M.' 32
5 'Schmidt, T.' 33
5 'Bienert, S.' 34
5 'Mariani, V.' 35
5 'Studer, G.' 36
5 'Haas, J.' 37
5 'Johner, N.' 38
5 'Schenk, A.D.' 39
5 'Philippsen, A.' 40
5 'Schwede, T.' 41
6 'Camacho, C.' 42
6 'Coulouris, G.' 43
6 'Avagyan, V.' 44
6 'Ma, N.' 45
6 'Papadopoulos, J.' 46
6 'Bealer, K.' 47
6 'Madden, T.L.' 48
7 'Steinegger, M.' 49
7 'Meier, M.' 50
7 'Mirdita, M.' 51
7 'Vohringer, H.' 52
7 'Haunsberger, S.J.' 53
7 'Soding, J.' 54
#
#
loop_
_software.pdbx_ordinal
_software.name
_software.classification
_software.description
_software.version
_software.type
_software.location
_software.citation_id
1 SWISS-MODEL 'model building' 'Homology modelling web service' 2025-06.3
package https://swissmodel.expasy.org 2
2 ProMod3 'model building' 'Modular homology modelling engine' 3.5.0 library
https://git.scicore.unibas.ch/schwede/ProMod3 3
3 QMEAN 'model building' 'QMEAN - Qualitative Model Energy ANalysis' 4.4.0
library https://git.scicore.unibas.ch/schwede/QMEAN 4
4 OpenStructure 'data processing'
'Open-Source Computational Structural Biology Framework' 2.10.0 package
https://openstructure.org/ 5
5 BLAST 'data collection' . 2.14.1 package https://blast.ncbi.nlm.nih.gov 6
6 HH-suite 'data collection' 'HH-suite3 for sensitive sequence searching' 3.2.0
package https://github.com/soedinglab/hh-suite 7
#
#
loop_
_ma_software_group.ordinal_id
_ma_software_group.group_id
_ma_software_group.software_id
_ma_software_group.parameter_group_id
1 1 6 .
2 2 1 .
3 2 4 .
4 2 5 .
5 2 6 .
6 3 1 .
7 3 4 .
8 4 1 .
9 4 2 .
10 4 4 .
11 5 3 .
12 6 1 .
13 6 3 .
14 6 4 .
#
#
loop_
_audit_author.name
_audit_author.pdbx_ordinal
'Bienert, S.' 1
'Waterhouse, A.' 2
'de Beer, T.A.P.' 3
'Tauriello, G.' 4
'Studer, G.' 5
'Bordoli, L.' 6
'Schwede, T.' 7
#
#
loop_
_chem_comp.id
_chem_comp.type
_chem_comp.name
_chem_comp.formula
_chem_comp.formula_weight
_chem_comp.ma_provenance
ALA 'L-peptide linking' ALANINE 'C3 H7 N O2' 89.094 'CCD Core'
ARG 'L-peptide linking' ARGININE 'C6 H15 N4 O2 1' 175.212 'CCD Core'
ASN 'L-peptide linking' ASPARAGINE 'C4 H8 N2 O3' 132.119 'CCD Core'
ASP 'L-peptide linking' 'ASPARTIC ACID' 'C4 H7 N O4' 133.103 'CCD Core'
CYS 'L-peptide linking' CYSTEINE 'C3 H7 N O2 S' 121.154 'CCD Core'
GLN 'L-peptide linking' GLUTAMINE 'C5 H10 N2 O3' 146.146 'CCD Core'
GLU 'L-peptide linking' 'GLUTAMIC ACID' 'C5 H9 N O4' 147.130 'CCD Core'
GLY 'peptide linking' GLYCINE 'C2 H5 N O2' 75.067 'CCD Core'
ILE 'L-peptide linking' ISOLEUCINE 'C6 H13 N O2' 131.175 'CCD Core'
LEU 'L-peptide linking' LEUCINE 'C6 H13 N O2' 131.175 'CCD Core'
LYS 'L-peptide linking' LYSINE 'C6 H15 N2 O2 1' 147.198 'CCD Core'
MET 'L-peptide linking' METHIONINE 'C5 H11 N O2 S' 149.208 'CCD Core'
PHE 'L-peptide linking' PHENYLALANINE 'C9 H11 N O2' 165.192 'CCD Core'
PRO 'L-peptide linking' PROLINE 'C5 H9 N O2' 115.132 'CCD Core'
SER 'L-peptide linking' SERINE 'C3 H7 N O3' 105.093 'CCD Core'
THR 'L-peptide linking' THREONINE 'C4 H9 N O3' 119.120 'CCD Core'
TRP 'L-peptide linking' TRYPTOPHAN 'C11 H12 N2 O2' 204.229 'CCD Core'
TYR 'L-peptide linking' TYROSINE 'C9 H11 N O3' 181.191 'CCD Core'
VAL 'L-peptide linking' VALINE 'C5 H11 N O2' 117.148 'CCD Core'
#
#
loop_
_entity.id
_entity.type
_entity.src_method
_entity.pdbx_description
_entity.formula_weight
_entity.pdbx_number_of_molecules
_entity.details
1 polymer man . 3608.010 1 .
#
#
loop_
_struct_ref.id
_struct_ref.entity_id
_struct_ref.db_name
_struct_ref.db_code
_struct_ref.pdbx_db_accession
_struct_ref.pdbx_align_begin
_struct_ref.pdbx_seq_one_letter_code
_struct_ref.details
1 1 UNP VODM_VIOOD P83839 1 GAPICGESCFTGKCYTVQCSCSWPVCTRN 'Vodo peptide M'
#
#
loop_
_struct_ref_seq.align_id
_struct_ref_seq.ref_id
_struct_ref_seq.seq_align_beg
_struct_ref_seq.seq_align_end
_struct_ref_seq.db_align_beg
_struct_ref_seq.db_align_end
1 1 1 29 1 29
#
#
loop_
_ma_target_ref_db_details.target_entity_id
_ma_target_ref_db_details.db_name
_ma_target_ref_db_details.db_name_other_details
_ma_target_ref_db_details.db_code
_ma_target_ref_db_details.db_accession
_ma_target_ref_db_details.seq_db_isoform
_ma_target_ref_db_details.seq_db_align_begin
_ma_target_ref_db_details.seq_db_align_end
_ma_target_ref_db_details.ncbi_taxonomy_id
_ma_target_ref_db_details.organism_scientific
_ma_target_ref_db_details.seq_db_sequence_version_date
_ma_target_ref_db_details.seq_db_sequence_checksum
_ma_target_ref_db_details.is_primary
1 UNP . VODM_VIOOD P83839 . 1 29 97441 'Viola odorata (Sweet violet)' 2004-05-10
245A8ED801C4E8C3 .
#
#
loop_
_entity_poly.entity_id
_entity_poly.type
_entity_poly.nstd_linkage
_entity_poly.nstd_monomer
_entity_poly.pdbx_strand_id
_entity_poly.pdbx_seq_one_letter_code
_entity_poly.pdbx_seq_one_letter_code_can
1 polypeptide(L) no no A GAPICGESCFTGKCYTVQCSCSWPVCTRN
GAPICGESCFTGKCYTVQCSCSWPVCTRN
#
#
loop_
_entity_poly_seq.entity_id
_entity_poly_seq.num
_entity_poly_seq.mon_id
_entity_poly_seq.hetero
1 1 GLY .
1 2 ALA .
1 3 PRO .
1 4 ILE .
1 5 CYS .
1 6 GLY .
1 7 GLU .
1 8 SER .
1 9 CYS .
1 10 PHE .
1 11 THR .
1 12 GLY .
1 13 LYS .
1 14 CYS .
1 15 TYR .
1 16 THR .
1 17 VAL .
1 18 GLN .
1 19 CYS .
1 20 SER .
1 21 CYS .
1 22 SER .
1 23 TRP .
1 24 PRO .
1 25 VAL .
1 26 CYS .
1 27 THR .
1 28 ARG .
1 29 ASN .
#
#
loop_
_struct_asym.id
_struct_asym.entity_id
_struct_asym.details
A 1 .
#
#
loop_
_pdbx_poly_seq_scheme.asym_id
_pdbx_poly_seq_scheme.entity_id
_pdbx_poly_seq_scheme.seq_id
_pdbx_poly_seq_scheme.mon_id
_pdbx_poly_seq_scheme.pdb_seq_num
_pdbx_poly_seq_scheme.auth_seq_num
_pdbx_poly_seq_scheme.pdb_mon_id
_pdbx_poly_seq_scheme.auth_mon_id
_pdbx_poly_seq_scheme.pdb_strand_id
_pdbx_poly_seq_scheme.pdb_ins_code
A 1 1 GLY 1 1 GLY GLY A .
A 1 2 ALA 2 2 ALA ALA A .
A 1 3 PRO 3 3 PRO PRO A .
A 1 4 ILE 4 4 ILE ILE A .
A 1 5 CYS 5 5 CYS CYS A .
A 1 6 GLY 6 6 GLY GLY A .
A 1 7 GLU 7 7 GLU GLU A .
A 1 8 SER 8 8 SER SER A .
A 1 9 CYS 9 9 CYS CYS A .
A 1 10 PHE 10 10 PHE PHE A .
A 1 11 THR 11 11 THR THR A .
A 1 12 GLY 12 12 GLY GLY A .
A 1 13 LYS 13 13 LYS LYS A .
A 1 14 CYS 14 14 CYS CYS A .
A 1 15 TYR 15 15 TYR TYR A .
A 1 16 THR 16 16 THR THR A .
A 1 17 VAL 17 17 VAL VAL A .
A 1 18 GLN 18 18 GLN GLN A .
A 1 19 CYS 19 19 CYS CYS A .
A 1 20 SER 20 20 SER SER A .
A 1 21 CYS 21 21 CYS CYS A .
A 1 22 SER 22 22 SER SER A .
A 1 23 TRP 23 23 TRP TRP A .
A 1 24 PRO 24 24 PRO PRO A .
A 1 25 VAL 25 25 VAL VAL A .
A 1 26 CYS 26 26 CYS CYS A .
A 1 27 THR 27 27 THR THR A .
A 1 28 ARG 28 28 ARG ARG A .
A 1 29 ASN 29 29 ASN ASN A .
#
#
loop_
_ma_data.id
_ma_data.name
_ma_data.content_type
_ma_data.content_type_other_details
1
'Cyclotide Cter M {PDB ID=2lam, label_asym_id=A, auth_asym_id=A, SMTL ID=2lam.1.A}'
'template structure' .
2 . target .
3 'Target-template alignment by HHblits to 2lam, label_asym_id=A'
'target-template alignment' .
4 'model 1' 'model coordinates' .
5 SMTL 'reference database' .
6 PDB 'reference database' .
7 'Template search output' other 'Results of the sequence search'
#
#
loop_
_ma_data_group.ordinal_id
_ma_data_group.group_id
_ma_data_group.data_id
1 1 2
2 1 5
3 1 6
4 2 7
5 3 2
6 3 1
7 3 3
8 4 1
9 4 3
10 5 4
#
#
loop_
_ma_data_ref_db.data_id
_ma_data_ref_db.name
_ma_data_ref_db.location_url
_ma_data_ref_db.version
_ma_data_ref_db.release_date
5 SMTL https://swissmodel.expasy.org/templates/ . 2025-06-25
6 PDB https://www.wwpdb.org . 2025-06-20
#
#
loop_
_ma_target_entity.entity_id
_ma_target_entity.data_id
_ma_target_entity.origin
1 2 'reference database'
#
#
loop_
_ma_target_entity_instance.asym_id
_ma_target_entity_instance.entity_id
_ma_target_entity_instance.details
A 1 .
#
#
loop_
_ma_template_trans_matrix.id
_ma_template_trans_matrix.rot_matrix[1][1]
_ma_template_trans_matrix.rot_matrix[2][1]
_ma_template_trans_matrix.rot_matrix[3][1]
_ma_template_trans_matrix.rot_matrix[1][2]
_ma_template_trans_matrix.rot_matrix[2][2]
_ma_template_trans_matrix.rot_matrix[3][2]
_ma_template_trans_matrix.rot_matrix[1][3]
_ma_template_trans_matrix.rot_matrix[2][3]
_ma_template_trans_matrix.rot_matrix[3][3]
_ma_template_trans_matrix.tr_vector[1]
_ma_template_trans_matrix.tr_vector[2]
_ma_template_trans_matrix.tr_vector[3]
1 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000
1.000000 0 0 0
#
#
loop_
_ma_template_details.ordinal_id
_ma_template_details.template_id
_ma_template_details.template_origin
_ma_template_details.template_entity_type
_ma_template_details.template_trans_matrix_id
_ma_template_details.template_data_id
_ma_template_details.target_asym_id
_ma_template_details.template_label_asym_id
_ma_template_details.template_label_entity_id
_ma_template_details.template_model_num
_ma_template_details.template_auth_asym_id
1 1 'reference database' polymer 1 1 A A 1 1 A
#
#
loop_
_ma_template_poly.template_id
_ma_template_poly.seq_one_letter_code
_ma_template_poly.seq_one_letter_code_can
1 GLPTCGETCTLGTCYVPDCSCSWPICMKN GLPTCGETCTLGTCYVPDCSCSWPICMKN
#
#
loop_
_ma_template_poly_segment.id
_ma_template_poly_segment.template_id
_ma_template_poly_segment.residue_number_begin
_ma_template_poly_segment.residue_number_end
1 1 1 29
#
#
loop_
_ma_template_ref_db_details.template_id
_ma_template_ref_db_details.db_name
_ma_template_ref_db_details.db_name_other_details
_ma_template_ref_db_details.db_accession_code
_ma_template_ref_db_details.db_version_date
1 PDB . 2lam 2024-10-30
#
#
loop_
_ma_target_template_poly_mapping.id
_ma_target_template_poly_mapping.template_segment_id
_ma_target_template_poly_mapping.target_asym_id
_ma_target_template_poly_mapping.target_seq_id_begin
_ma_target_template_poly_mapping.target_seq_id_end
1 1 A 1 29
#
#
loop_
_ma_alignment_info.alignment_id
_ma_alignment_info.data_id
_ma_alignment_info.software_group_id
_ma_alignment_info.alignment_length
_ma_alignment_info.alignment_type
_ma_alignment_info.alignment_mode
1 3 1 29 'target-template pairwise alignment' local
#
#
loop_
_ma_alignment_details.ordinal_id
_ma_alignment_details.alignment_id
_ma_alignment_details.template_segment_id
_ma_alignment_details.target_asym_id
_ma_alignment_details.score_type
_ma_alignment_details.score_type_other_details
_ma_alignment_details.score_value
_ma_alignment_details.percent_sequence_identity
_ma_alignment_details.sequence_identity_denominator
_ma_alignment_details.sequence_identity_denominator_other_details
1 1 1 A 'HHblits e-value' . 5.4e-18 58.621
'Number of aligned residue pairs (not including the gaps)' .
#
#
loop_
_ma_alignment.ordinal_id
_ma_alignment.alignment_id
_ma_alignment.target_template_flag
_ma_alignment.sequence
1 1 1 GAPICGESCFTGKCYTVQCSCSWPVCTRN
2 1 2 GLPTCGETCTLGTCYVPDCSCSWPICMKN
#
#
loop_
_ma_protocol_step.ordinal_id
_ma_protocol_step.protocol_id
_ma_protocol_step.step_id
_ma_protocol_step.method_type
_ma_protocol_step.step_name
_ma_protocol_step.details
_ma_protocol_step.software_group_id
_ma_protocol_step.input_data_group_id
_ma_protocol_step.output_data_group_id
1 1 1 'template search' 'template search' 'SWISS-MODEL template search in PDB' 2
1 2
2 1 2 'template selection' 'template selection'
'Automatic template selection by SWISS-MODEL' 3 2 4
3 1 3 modeling 'homology modeling'
'SWISS-MODEL auto-model mode using ProMod3 on 2lam.1' 4 3 5
#
#
loop_
_ma_model_list.ordinal_id
_ma_model_list.model_name
_ma_model_list.data_id
_ma_model_list.model_type
_ma_model_list.model_type_other_details
1 'model 1' 4 'Homology model' .
#
#
loop_
_ma_model_group.id
_ma_model_group.name
_ma_model_group.details
1 . .
#
#
loop_
_ma_model_group_link.group_id
_ma_model_group_link.model_id
1 1
#
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_alt_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.auth_seq_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.label_entity_id
_atom_site.auth_asym_id
_atom_site.auth_comp_id
_atom_site.B_iso_or_equiv
_atom_site.pdbx_PDB_model_num
ATOM 1 N N . GLY 1 1 ? A 2.927 7.739 0.898 1 1 A GLY 0.440 1
ATOM 2 C CA . GLY 1 1 ? A 2.253 8.674 -0.114 1 1 A GLY 0.440 1
ATOM 3 C C . GLY 1 1 ? A 2.426 8.352 -1.571 1 1 A GLY 0.440 1
ATOM 4 O O . GLY 1 1 ? A 1.537 8.665 -2.324 1 1 A GLY 0.440 1
ATOM 5 N N . ALA 2 2 ? A 3.568 7.728 -2.014 1 1 A ALA 0.430 1
ATOM 6 C CA . ALA 2 2 ? A 3.827 7.390 -3.416 1 1 A ALA 0.430 1
ATOM 7 C C . ALA 2 2 ? A 3.217 6.028 -3.750 1 1 A ALA 0.430 1
ATOM 8 O O . ALA 2 2 ? A 3.724 5.019 -3.260 1 1 A ALA 0.430 1
ATOM 9 C CB . ALA 2 2 ? A 5.331 7.357 -3.790 1 1 A ALA 0.430 1
ATOM 10 N N . PRO 3 3 ? A 2.151 5.903 -4.534 1 1 A PRO 0.660 1
ATOM 11 C CA . PRO 3 3 ? A 1.491 4.647 -4.880 1 1 A PRO 0.660 1
ATOM 12 C C . PRO 3 3 ? A 2.243 3.898 -5.951 1 1 A PRO 0.660 1
ATOM 13 O O . PRO 3 3 ? A 1.640 3.281 -6.821 1 1 A PRO 0.660 1
ATOM 14 C CB . PRO 3 3 ? A 0.110 5.111 -5.388 1 1 A PRO 0.660 1
ATOM 15 C CG . PRO 3 3 ? A 0.353 6.506 -5.965 1 1 A PRO 0.660 1
ATOM 16 C CD . PRO 3 3 ? A 1.509 7.050 -5.146 1 1 A PRO 0.660 1
ATOM 17 N N . ILE 4 4 ? A 3.577 3.834 -5.860 1 1 A ILE 0.690 1
ATOM 18 C CA . ILE 4 4 ? A 4.428 3.194 -6.840 1 1 A ILE 0.690 1
ATOM 19 C C . ILE 4 4 ? A 4.589 1.717 -6.507 1 1 A ILE 0.690 1
ATOM 20 O O . ILE 4 4 ? A 5.495 1.035 -6.974 1 1 A ILE 0.690 1
ATOM 21 C CB . ILE 4 4 ? A 5.800 3.858 -6.862 1 1 A ILE 0.690 1
ATOM 22 C CG1 . ILE 4 4 ? A 6.538 3.757 -5.500 1 1 A ILE 0.690 1
ATOM 23 C CG2 . ILE 4 4 ? A 5.623 5.328 -7.308 1 1 A ILE 0.690 1
ATOM 24 C CD1 . ILE 4 4 ? A 8.008 4.170 -5.583 1 1 A ILE 0.690 1
ATOM 25 N N . CYS 5 5 ? A 3.692 1.187 -5.654 1 1 A CYS 0.780 1
ATOM 26 C CA . CYS 5 5 ? A 3.698 -0.196 -5.242 1 1 A CYS 0.780 1
ATOM 27 C C . CYS 5 5 ? A 2.980 -1.062 -6.242 1 1 A CYS 0.780 1
ATOM 28 O O . CYS 5 5 ? A 3.339 -2.219 -6.428 1 1 A CYS 0.780 1
ATOM 29 C CB . CYS 5 5 ? A 3.017 -0.364 -3.865 1 1 A CYS 0.780 1
ATOM 30 S SG . CYS 5 5 ? A 3.841 0.649 -2.601 1 1 A CYS 0.780 1
ATOM 31 N N . GLY 6 6 ? A 1.927 -0.522 -6.907 1 1 A GLY 0.750 1
ATOM 32 C CA . GLY 6 6 ? A 1.135 -1.291 -7.863 1 1 A GLY 0.750 1
ATOM 33 C C . GLY 6 6 ? A 0.293 -2.347 -7.213 1 1 A GLY 0.750 1
ATOM 34 O O . GLY 6 6 ? A 0.107 -3.434 -7.745 1 1 A GLY 0.750 1
ATOM 35 N N . GLU 7 7 ? A -0.240 -2.031 -6.024 1 1 A GLU 0.720 1
ATOM 36 C CA . GLU 7 7 ? A -0.970 -2.978 -5.227 1 1 A GLU 0.720 1
ATOM 37 C C . GLU 7 7 ? A -2.143 -2.268 -4.601 1 1 A GLU 0.720 1
ATOM 38 O O . GLU 7 7 ? A -2.085 -1.075 -4.309 1 1 A GLU 0.720 1
ATOM 39 C CB . GLU 7 7 ? A -0.084 -3.586 -4.123 1 1 A GLU 0.720 1
ATOM 40 C CG . GLU 7 7 ? A -0.704 -4.828 -3.450 1 1 A GLU 0.720 1
ATOM 41 C CD . GLU 7 7 ? A 0.069 -5.299 -2.238 1 1 A GLU 0.720 1
ATOM 42 O OE1 . GLU 7 7 ? A 1.086 -4.665 -1.858 1 1 A GLU 0.720 1
ATOM 43 O OE2 . GLU 7 7 ? A -0.391 -6.304 -1.639 1 1 A GLU 0.720 1
ATOM 44 N N . SER 8 8 ? A -3.259 -2.989 -4.406 1 1 A SER 0.740 1
ATOM 45 C CA . SER 8 8 ? A -4.459 -2.479 -3.780 1 1 A SER 0.740 1
ATOM 46 C C . SER 8 8 ? A -4.754 -3.312 -2.567 1 1 A SER 0.740 1
ATOM 47 O O . SER 8 8 ? A -5.142 -4.473 -2.659 1 1 A SER 0.740 1
ATOM 48 C CB . SER 8 8 ? A -5.669 -2.513 -4.754 1 1 A SER 0.740 1
ATOM 49 O OG . SER 8 8 ? A -6.890 -2.067 -4.157 1 1 A SER 0.740 1
ATOM 50 N N . CYS 9 9 ? A -4.598 -2.718 -1.376 1 1 A CYS 0.710 1
ATOM 51 C CA . CYS 9 9 ? A -4.919 -3.356 -0.129 1 1 A CYS 0.710 1
ATOM 52 C C . CYS 9 9 ? A -6.373 -3.208 0.227 1 1 A CYS 0.710 1
ATOM 53 O O . CYS 9 9 ? A -6.693 -2.711 1.297 1 1 A CYS 0.710 1
ATOM 54 C CB . CYS 9 9 ? A -4.082 -2.793 1.036 1 1 A CYS 0.710 1
ATOM 55 S SG . CYS 9 9 ? A -4.111 -0.988 1.258 1 1 A CYS 0.710 1
ATOM 56 N N . PHE 10 10 ? A -7.303 -3.698 -0.614 1 1 A PHE 0.620 1
ATOM 57 C CA . PHE 10 10 ? A -8.736 -3.666 -0.347 1 1 A PHE 0.620 1
ATOM 58 C C . PHE 10 10 ? A -9.093 -4.369 0.963 1 1 A PHE 0.620 1
ATOM 59 O O . PHE 10 10 ? A -9.961 -3.944 1.720 1 1 A PHE 0.620 1
ATOM 60 C CB . PHE 10 10 ? A -9.483 -4.335 -1.535 1 1 A PHE 0.620 1
ATOM 61 C CG . PHE 10 10 ? A -10.981 -4.260 -1.389 1 1 A PHE 0.620 1
ATOM 62 C CD1 . PHE 10 10 ? A -11.709 -5.365 -0.922 1 1 A PHE 0.620 1
ATOM 63 C CD2 . PHE 10 10 ? A -11.667 -3.071 -1.666 1 1 A PHE 0.620 1
ATOM 64 C CE1 . PHE 10 10 ? A -13.096 -5.297 -0.767 1 1 A PHE 0.620 1
ATOM 65 C CE2 . PHE 10 10 ? A -13.056 -2.995 -1.520 1 1 A PHE 0.620 1
ATOM 66 C CZ . PHE 10 10 ? A -13.770 -4.112 -1.077 1 1 A PHE 0.620 1
ATOM 67 N N . THR 11 11 ? A -8.375 -5.465 1.258 1 1 A THR 0.620 1
ATOM 68 C CA . THR 11 11 ? A -8.504 -6.233 2.482 1 1 A THR 0.620 1
ATOM 69 C C . THR 11 11 ? A -7.794 -5.601 3.664 1 1 A THR 0.620 1
ATOM 70 O O . THR 11 11 ? A -8.102 -5.908 4.810 1 1 A THR 0.620 1
ATOM 71 C CB . THR 11 11 ? A -7.938 -7.637 2.304 1 1 A THR 0.620 1
ATOM 72 O OG1 . THR 11 11 ? A -6.572 -7.611 1.911 1 1 A THR 0.620 1
ATOM 73 C CG2 . THR 11 11 ? A -8.677 -8.333 1.157 1 1 A THR 0.620 1
ATOM 74 N N . GLY 12 12 ? A -6.833 -4.686 3.408 1 1 A GLY 0.710 1
ATOM 75 C CA . GLY 12 12 ? A -6.047 -4.016 4.434 1 1 A GLY 0.710 1
ATOM 76 C C . GLY 12 12 ? A -4.704 -4.647 4.664 1 1 A GLY 0.710 1
ATOM 77 O O . GLY 12 12 ? A -4.210 -4.709 5.784 1 1 A GLY 0.710 1
ATOM 78 N N . LYS 13 13 ? A -4.060 -5.138 3.595 1 1 A LYS 0.700 1
ATOM 79 C CA . LYS 13 13 ? A -2.746 -5.715 3.689 1 1 A LYS 0.700 1
ATOM 80 C C . LYS 13 13 ? A -2.023 -5.504 2.388 1 1 A LYS 0.700 1
ATOM 81 O O . LYS 13 13 ? A -2.628 -5.677 1.338 1 1 A LYS 0.700 1
ATOM 82 C CB . LYS 13 13 ? A -2.876 -7.220 3.984 1 1 A LYS 0.700 1
ATOM 83 C CG . LYS 13 13 ? A -1.540 -7.931 4.195 1 1 A LYS 0.700 1
ATOM 84 C CD . LYS 13 13 ? A -1.727 -9.385 4.623 1 1 A LYS 0.700 1
ATOM 85 C CE . LYS 13 13 ? A -0.397 -10.100 4.826 1 1 A LYS 0.700 1
ATOM 86 N NZ . LYS 13 13 ? A -0.618 -11.492 5.264 1 1 A LYS 0.700 1
ATOM 87 N N . CYS 14 14 ? A -0.726 -5.127 2.441 1 1 A CYS 0.760 1
ATOM 88 C CA . CYS 14 14 ? A 0.101 -4.963 1.263 1 1 A CYS 0.760 1
ATOM 89 C C . CYS 14 14 ? A 1.241 -5.950 1.353 1 1 A CYS 0.760 1
ATOM 90 O O . CYS 14 14 ? A 1.997 -5.942 2.323 1 1 A CYS 0.760 1
ATOM 91 C CB . CYS 14 14 ? A 0.689 -3.536 1.138 1 1 A CYS 0.760 1
ATOM 92 S SG . CYS 14 14 ? A -0.595 -2.273 1.142 1 1 A CYS 0.760 1
ATOM 93 N N . TYR 15 15 ? A 1.367 -6.864 0.373 1 1 A TYR 0.670 1
ATOM 94 C CA . TYR 15 15 ? A 2.452 -7.828 0.331 1 1 A TYR 0.670 1
ATOM 95 C C . TYR 15 15 ? A 3.714 -7.224 -0.243 1 1 A TYR 0.670 1
ATOM 96 O O . TYR 15 15 ? A 4.810 -7.742 -0.022 1 1 A TYR 0.670 1
ATOM 97 C CB . TYR 15 15 ? A 2.069 -9.123 -0.458 1 1 A TYR 0.670 1
ATOM 98 C CG . TYR 15 15 ? A 1.694 -8.906 -1.911 1 1 A TYR 0.670 1
ATOM 99 C CD1 . TYR 15 15 ? A 2.652 -8.560 -2.884 1 1 A TYR 0.670 1
ATOM 100 C CD2 . TYR 15 15 ? A 0.365 -9.069 -2.324 1 1 A TYR 0.670 1
ATOM 101 C CE1 . TYR 15 15 ? A 2.283 -8.335 -4.214 1 1 A TYR 0.670 1
ATOM 102 C CE2 . TYR 15 15 ? A -0.007 -8.870 -3.660 1 1 A TYR 0.670 1
ATOM 103 C CZ . TYR 15 15 ? A 0.957 -8.508 -4.602 1 1 A TYR 0.670 1
ATOM 104 O OH . TYR 15 15 ? A 0.593 -8.328 -5.947 1 1 A TYR 0.670 1
ATOM 105 N N . THR 16 16 ? A 3.600 -6.111 -1.004 1 1 A THR 0.710 1
ATOM 106 C CA . THR 16 16 ? A 4.752 -5.435 -1.575 1 1 A THR 0.710 1
ATOM 107 C C . THR 16 16 ? A 5.669 -4.922 -0.491 1 1 A THR 0.710 1
ATOM 108 O O . THR 16 16 ? A 5.260 -4.262 0.462 1 1 A THR 0.710 1
ATOM 109 C CB . THR 16 16 ? A 4.395 -4.319 -2.544 1 1 A THR 0.710 1
ATOM 110 O OG1 . THR 16 16 ? A 3.729 -4.855 -3.672 1 1 A THR 0.710 1
ATOM 111 C CG2 . THR 16 16 ? A 5.631 -3.651 -3.155 1 1 A THR 0.710 1
ATOM 112 N N . VAL 17 17 ? A 6.967 -5.253 -0.603 1 1 A VAL 0.670 1
ATOM 113 C CA . VAL 17 17 ? A 8.000 -4.935 0.358 1 1 A VAL 0.670 1
ATOM 114 C C . VAL 17 17 ? A 8.049 -3.462 0.741 1 1 A VAL 0.670 1
ATOM 115 O O . VAL 17 17 ? A 8.202 -2.594 -0.116 1 1 A VAL 0.670 1
ATOM 116 C CB . VAL 17 17 ? A 9.341 -5.358 -0.214 1 1 A VAL 0.670 1
ATOM 117 C CG1 . VAL 17 17 ? A 10.528 -4.924 0.664 1 1 A VAL 0.670 1
ATOM 118 C CG2 . VAL 17 17 ? A 9.348 -6.886 -0.395 1 1 A VAL 0.670 1
ATOM 119 N N . GLN 18 18 ? A 7.890 -3.162 2.054 1 1 A GLN 0.650 1
ATOM 120 C CA . GLN 18 18 ? A 7.916 -1.824 2.632 1 1 A GLN 0.650 1
ATOM 121 C C . GLN 18 18 ? A 6.777 -0.931 2.163 1 1 A GLN 0.650 1
ATOM 122 O O . GLN 18 18 ? A 6.811 0.281 2.364 1 1 A GLN 0.650 1
ATOM 123 C CB . GLN 18 18 ? A 9.261 -1.093 2.366 1 1 A GLN 0.650 1
ATOM 124 C CG . GLN 18 18 ? A 10.507 -1.856 2.863 1 1 A GLN 0.650 1
ATOM 125 C CD . GLN 18 18 ? A 10.541 -1.959 4.382 1 1 A GLN 0.650 1
ATOM 126 O OE1 . GLN 18 18 ? A 10.411 -0.968 5.095 1 1 A GLN 0.650 1
ATOM 127 N NE2 . GLN 18 18 ? A 10.733 -3.192 4.904 1 1 A GLN 0.650 1
ATOM 128 N N . CYS 19 19 ? A 5.733 -1.504 1.530 1 1 A CYS 0.750 1
ATOM 129 C CA . CYS 19 19 ? A 4.609 -0.740 1.050 1 1 A CYS 0.750 1
ATOM 130 C C . CYS 19 19 ? A 3.533 -0.696 2.088 1 1 A CYS 0.750 1
ATOM 131 O O . CYS 19 19 ? A 3.091 -1.706 2.623 1 1 A CYS 0.750 1
ATOM 132 C CB . CYS 19 19 ? A 4.049 -1.268 -0.282 1 1 A CYS 0.750 1
ATOM 133 S SG . CYS 19 19 ? A 5.066 -0.656 -1.656 1 1 A CYS 0.750 1
ATOM 134 N N . SER 20 20 ? A 3.101 0.525 2.411 1 1 A SER 0.760 1
ATOM 135 C CA . SER 20 20 ? A 2.134 0.773 3.448 1 1 A SER 0.760 1
ATOM 136 C C . SER 20 20 ? A 0.751 0.784 2.856 1 1 A SER 0.760 1
ATOM 137 O O . SER 20 20 ? A 0.533 1.253 1.741 1 1 A SER 0.760 1
ATOM 138 C CB . SER 20 20 ? A 2.394 2.120 4.161 1 1 A SER 0.760 1
ATOM 139 O OG . SER 20 20 ? A 3.746 2.159 4.617 1 1 A SER 0.760 1
ATOM 140 N N . CYS 21 21 ? A -0.246 0.249 3.580 1 1 A CYS 0.750 1
ATOM 141 C CA . CYS 21 21 ? A -1.613 0.258 3.099 1 1 A CYS 0.750 1
ATOM 142 C C . CYS 21 21 ? A -2.245 1.620 3.212 1 1 A CYS 0.750 1
ATOM 143 O O . CYS 21 21 ? A -2.550 2.088 4.302 1 1 A CYS 0.750 1
ATOM 144 C CB . CYS 21 21 ? A -2.488 -0.786 3.836 1 1 A CYS 0.750 1
ATOM 145 S SG . CYS 21 21 ? A -4.226 -0.815 3.279 1 1 A CYS 0.750 1
ATOM 146 N N . SER 22 22 ? A -2.505 2.259 2.065 1 1 A SER 0.690 1
ATOM 147 C CA . SER 22 22 ? A -3.138 3.562 2.014 1 1 A SER 0.690 1
ATOM 148 C C . SER 22 22 ? A -4.444 3.420 1.327 1 1 A SER 0.690 1
ATOM 149 O O . SER 22 22 ? A -4.713 4.068 0.317 1 1 A SER 0.690 1
ATOM 150 C CB . SER 22 22 ? A -2.295 4.569 1.248 1 1 A SER 0.690 1
ATOM 151 O OG . SER 22 22 ? A -1.124 4.853 2.040 1 1 A SER 0.690 1
ATOM 152 N N . TRP 23 23 ? A -5.235 2.485 1.883 1 1 A TRP 0.600 1
ATOM 153 C CA . TRP 23 23 ? A -6.512 1.998 1.428 1 1 A TRP 0.600 1
ATOM 154 C C . TRP 23 23 ? A -7.313 2.905 0.471 1 1 A TRP 0.600 1
ATOM 155 O O . TRP 23 23 ? A -7.573 4.066 0.778 1 1 A TRP 0.600 1
ATOM 156 C CB . TRP 23 23 ? A -7.392 1.562 2.628 1 1 A TRP 0.600 1
ATOM 157 C CG . TRP 23 23 ? A -8.633 0.757 2.257 1 1 A TRP 0.600 1
ATOM 158 C CD1 . TRP 23 23 ? A -8.774 -0.601 2.225 1 1 A TRP 0.600 1
ATOM 159 C CD2 . TRP 23 23 ? A -9.882 1.303 1.786 1 1 A TRP 0.600 1
ATOM 160 N NE1 . TRP 23 23 ? A -10.018 -0.946 1.743 1 1 A TRP 0.600 1
ATOM 161 C CE2 . TRP 23 23 ? A -10.718 0.212 1.474 1 1 A TRP 0.600 1
ATOM 162 C CE3 . TRP 23 23 ? A -10.325 2.614 1.615 1 1 A TRP 0.600 1
ATOM 163 C CZ2 . TRP 23 23 ? A -12.009 0.419 1.004 1 1 A TRP 0.600 1
ATOM 164 C CZ3 . TRP 23 23 ? A -11.616 2.825 1.113 1 1 A TRP 0.600 1
ATOM 165 C CH2 . TRP 23 23 ? A -12.455 1.741 0.821 1 1 A TRP 0.600 1
ATOM 166 N N . PRO 24 24 ? A -7.745 2.431 -0.682 1 1 A PRO 0.700 1
ATOM 167 C CA . PRO 24 24 ? A -7.664 1.057 -1.122 1 1 A PRO 0.700 1
ATOM 168 C C . PRO 24 24 ? A -6.311 0.775 -1.731 1 1 A PRO 0.700 1
ATOM 169 O O . PRO 24 24 ? A -6.030 -0.382 -1.974 1 1 A PRO 0.700 1
ATOM 170 C CB . PRO 24 24 ? A -8.812 0.936 -2.118 1 1 A PRO 0.700 1
ATOM 171 C CG . PRO 24 24 ? A -8.945 2.337 -2.720 1 1 A PRO 0.700 1
ATOM 172 C CD . PRO 24 24 ? A -8.529 3.267 -1.580 1 1 A PRO 0.700 1
ATOM 173 N N . VAL 25 25 ? A -5.433 1.766 -1.980 1 1 A VAL 0.760 1
ATOM 174 C CA . VAL 25 25 ? A -4.204 1.520 -2.724 1 1 A VAL 0.760 1
ATOM 175 C C . VAL 25 25 ? A -3.000 1.447 -1.811 1 1 A VAL 0.760 1
ATOM 176 O O . VAL 25 25 ? A -2.928 2.095 -0.781 1 1 A VAL 0.760 1
ATOM 177 C CB . VAL 25 25 ? A -3.961 2.557 -3.807 1 1 A VAL 0.760 1
ATOM 178 C CG1 . VAL 25 25 ? A -5.087 2.450 -4.854 1 1 A VAL 0.760 1
ATOM 179 C CG2 . VAL 25 25 ? A -3.897 3.976 -3.206 1 1 A VAL 0.760 1
ATOM 180 N N . CYS 26 26 ? A -1.973 0.650 -2.125 1 1 A CYS 0.790 1
ATOM 181 C CA . CYS 26 26 ? A -0.782 0.637 -1.291 1 1 A CYS 0.790 1
ATOM 182 C C . CYS 26 26 ? A 0.197 1.716 -1.718 1 1 A CYS 0.790 1
ATOM 183 O O . CYS 26 26 ? A 0.457 1.889 -2.907 1 1 A CYS 0.790 1
ATOM 184 C CB . CYS 26 26 ? A -0.077 -0.724 -1.349 1 1 A CYS 0.790 1
ATOM 185 S SG . CYS 26 26 ? A -1.147 -2.066 -0.791 1 1 A CYS 0.790 1
ATOM 186 N N . THR 27 27 ? A 0.751 2.488 -0.756 1 1 A THR 0.760 1
ATOM 187 C CA . THR 27 27 ? A 1.678 3.582 -1.021 1 1 A THR 0.760 1
ATOM 188 C C . THR 27 27 ? A 2.912 3.480 -0.163 1 1 A THR 0.760 1
ATOM 189 O O . THR 27 27 ? A 2.855 3.090 0.997 1 1 A THR 0.760 1
ATOM 190 C CB . THR 27 27 ? A 1.119 5.010 -0.905 1 1 A THR 0.760 1
ATOM 191 O OG1 . THR 27 27 ? A 0.879 5.522 0.401 1 1 A THR 0.760 1
ATOM 192 C CG2 . THR 27 27 ? A -0.194 5.123 -1.665 1 1 A THR 0.760 1
ATOM 193 N N . ARG 28 28 ? A 4.083 3.844 -0.701 1 1 A ARG 0.410 1
ATOM 194 C CA . ARG 28 28 ? A 5.319 3.836 0.061 1 1 A ARG 0.410 1
ATOM 195 C C . ARG 28 28 ? A 5.833 5.250 0.288 1 1 A ARG 0.410 1
ATOM 196 O O . ARG 28 28 ? A 6.499 5.805 -0.615 1 1 A ARG 0.410 1
ATOM 197 C CB . ARG 28 28 ? A 6.378 3.083 -0.753 1 1 A ARG 0.410 1
ATOM 198 C CG . ARG 28 28 ? A 7.732 3.012 -0.040 1 1 A ARG 0.410 1
ATOM 199 C CD . ARG 28 28 ? A 8.761 2.289 -0.882 1 1 A ARG 0.410 1
ATOM 200 N NE . ARG 28 28 ? A 10.015 2.166 -0.072 1 1 A ARG 0.410 1
ATOM 201 C CZ . ARG 28 28 ? A 10.991 3.082 -0.014 1 1 A ARG 0.410 1
ATOM 202 N NH1 . ARG 28 28 ? A 10.905 4.235 -0.666 1 1 A ARG 0.410 1
ATOM 203 N NH2 . ARG 28 28 ? A 12.081 2.827 0.707 1 1 A ARG 0.410 1
ATOM 204 N N . ASN 29 29 ? A 5.616 5.871 1.448 1 1 A ASN 0.430 1
ATOM 205 C CA . ASN 29 29 ? A 6.042 7.221 1.833 1 1 A ASN 0.430 1
ATOM 206 C C . ASN 29 29 ? A 5.561 8.475 1.056 1 1 A ASN 0.430 1
ATOM 207 O O . ASN 29 29 ? A 5.553 8.356 -0.231 1 1 A ASN 0.430 1
ATOM 208 C CB . ASN 29 29 ? A 7.509 7.580 1.726 1 1 A ASN 0.430 1
ATOM 209 C CG . ASN 29 29 ? A 8.325 6.574 2.458 1 1 A ASN 0.430 1
ATOM 210 O OD1 . ASN 29 29 ? A 8.119 6.181 3.602 1 1 A ASN 0.430 1
ATOM 211 N ND2 . ASN 29 29 ? A 9.355 6.124 1.712 1 1 A ASN 0.430 1
ATOM 212 O OXT . ASN 29 29 ? A 5.103 9.391 1.695 1 1 A ASN 0.430 1
#
#
loop_
_atom_type.symbol
C
N
O
S
#
#
loop_
_ma_qa_metric.id
_ma_qa_metric.name
_ma_qa_metric.description
_ma_qa_metric.type
_ma_qa_metric.mode
_ma_qa_metric.type_other_details
_ma_qa_metric.software_group_id
1 QMEANDisCo 'Predicted accuracy according to all-atom lDDT in [0,1].'
'pLDDT all-atom in [0,1]' local . 5
2 QMEANDisCo 'Predicted accuracy according to all-atom lDDT in [0,1].'
'pLDDT all-atom in [0,1]' global . 5
3 GMQE
'Global Model Quality Estimate of the model accuracy, calculated by SWISS-MODEL.'
'normalized score' global . 6
#
#
loop_
_ma_qa_metric_global.ordinal_id
_ma_qa_metric_global.model_id
_ma_qa_metric_global.metric_id
_ma_qa_metric_global.metric_value
1 1 2 0.670
2 1 3 0.703
#
#
loop_
_ma_qa_metric_local.ordinal_id
_ma_qa_metric_local.model_id
_ma_qa_metric_local.label_asym_id
_ma_qa_metric_local.label_seq_id
_ma_qa_metric_local.label_comp_id
_ma_qa_metric_local.metric_id
_ma_qa_metric_local.metric_value
1 1 A 1 GLY 1 0.440
2 1 A 2 ALA 1 0.430
3 1 A 3 PRO 1 0.660
4 1 A 4 ILE 1 0.690
5 1 A 5 CYS 1 0.780
6 1 A 6 GLY 1 0.750
7 1 A 7 GLU 1 0.720
8 1 A 8 SER 1 0.740
9 1 A 9 CYS 1 0.710
10 1 A 10 PHE 1 0.620
11 1 A 11 THR 1 0.620
12 1 A 12 GLY 1 0.710
13 1 A 13 LYS 1 0.700
14 1 A 14 CYS 1 0.760
15 1 A 15 TYR 1 0.670
16 1 A 16 THR 1 0.710
17 1 A 17 VAL 1 0.670
18 1 A 18 GLN 1 0.650
19 1 A 19 CYS 1 0.750
20 1 A 20 SER 1 0.760
21 1 A 21 CYS 1 0.750
22 1 A 22 SER 1 0.690
23 1 A 23 TRP 1 0.600
24 1 A 24 PRO 1 0.700
25 1 A 25 VAL 1 0.760
26 1 A 26 CYS 1 0.790
27 1 A 27 THR 1 0.760
28 1 A 28 ARG 1 0.410
29 1 A 29 ASN 1 0.430
#
#
loop_
_pdbx_data_usage.id
_pdbx_data_usage.type
_pdbx_data_usage.details
_pdbx_data_usage.url
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