data_SMR-d4a0fbd9bbf7f4303f552904ae311cbb_1
_entry.id SMR-d4a0fbd9bbf7f4303f552904ae311cbb_1
_struct.entry_id SMR-d4a0fbd9bbf7f4303f552904ae311cbb_1
_struct.pdbx_model_details
;This model was generated unsupervised by the SWISS-MODEL homology-modelling pipeline for the SWISS-MODEL Repository, a database of annotated 3D protein structure models. The modelled monomer covers following UniProtKB entries:

  - P84563/ PSAD_POPEU, Photosystem I reaction center subunit II

Estimated model accuracy of this model is 0.647, calculated by SWISS-MODEL as Global Model Quality Estimate (GMQE).
;
_struct.pdbx_structure_determination_methodology computational
_struct.title 'Model for UniProtKB entries P84563'
_audit_conform.dict_location https://raw.githubusercontent.com/ihmwg/ModelCIF/80e1e22/dist/mmcif_ma.dic
_audit_conform.dict_name mmcif_ma.dic
_audit_conform.dict_version 1.4.7
#
loop_
_citation.id
_citation.title
_citation.journal_abbrev
_citation.journal_volume
_citation.page_first
_citation.page_last
_citation.year
_citation.pdbx_database_id_PubMed
_citation.pdbx_database_id_DOI
primary 'The SWISS-MODEL Repository - new features and functionality'
'Nucleic Acids Res.' 45 D313 D319 2017 27899672 10.1093/nar/gkw1132
2 'SWISS-MODEL: homology modelling of protein structures and complexes'
'Nucleic Acids Res.' 46 W296 W303 2018 29788355 10.1093/nar/gky427
3 'ProMod3 - A versatile homology modelling toolbox' 'PLoS Comput. Biol.' 17(1)
1 18 2021 33507980 10.1371/journal.pcbi.1008667
4 'QMEANDisCo - distance constraints applied on model quality estimation'
Bioinformatics 36 1765 1771 2020 31697312 10.1093/bioinformatics/btz828
5
'OpenStructure: an integrated software framework for computational structural biology'
'Acta Crystallogr., Sect. D: Biol. Crystallogr.' 69 701 709 2013 23633579
10.1107/S0907444913007051
6 'BLAST+: architecture and applications' 'BMC Bioinf.' 10 421 . 2009 20003500
10.1186/1471-2105-10-421
7 'HH-suite3 for fast remote homology detection and deep protein annotation'
'BMC Bioinf.' 20 473 . 2019 31521110 10.1186/s12859-019-3019-7
#
#
loop_
_citation_author.citation_id
_citation_author.name
_citation_author.ordinal
primary 'Bienert, S.' 1
primary 'Waterhouse, A.' 2
primary 'de Beer, T.A.P.' 3
primary 'Tauriello, G.' 4
primary 'Studer, G.' 5
primary 'Bordoli, L.' 6
primary 'Schwede, T.' 7
2 'Waterhouse, A.' 8
2 'Bertoni, M.' 9
2 'Bienert, S.' 10
2 'Studer, G.' 11
2 'Tauriello, G.' 12
2 'Gumienny, R.' 13
2 'Heer, F.T.' 14
2 'de Beer, T.A.P.' 15
2 'Rempfer, C.' 16
2 'Bordoli, L.' 17
2 'Lepore, R.' 18
2 'Schwede, T.' 19
3 'Studer, G.' 20
3 'Tauriello, G.' 21
3 'Bienert, S.' 22
3 'Biasini, M.' 23
3 'Johner, N.' 24
3 'Schwede, T.' 25
4 'Studer, G.' 26
4 'Rempfer, C.' 27
4 'Waterhouse, A.M.' 28
4 'Gumienny, R.' 29
4 'Haas, J.' 30
4 'Schwede, T.' 31
5 'Biasini, M.' 32
5 'Schmidt, T.' 33
5 'Bienert, S.' 34
5 'Mariani, V.' 35
5 'Studer, G.' 36
5 'Haas, J.' 37
5 'Johner, N.' 38
5 'Schenk, A.D.' 39
5 'Philippsen, A.' 40
5 'Schwede, T.' 41
6 'Camacho, C.' 42
6 'Coulouris, G.' 43
6 'Avagyan, V.' 44
6 'Ma, N.' 45
6 'Papadopoulos, J.' 46
6 'Bealer, K.' 47
6 'Madden, T.L.' 48
7 'Steinegger, M.' 49
7 'Meier, M.' 50
7 'Mirdita, M.' 51
7 'Vohringer, H.' 52
7 'Haunsberger, S.J.' 53
7 'Soding, J.' 54
#
#
loop_
_software.pdbx_ordinal
_software.name
_software.classification
_software.description
_software.version
_software.type
_software.location
_software.citation_id
1 SWISS-MODEL 'model building' 'Homology modelling web service' 2025-06.3
package https://swissmodel.expasy.org 2
2 ProMod3 'model building' 'Modular homology modelling engine' 3.5.0 library
https://git.scicore.unibas.ch/schwede/ProMod3 3
3 QMEAN 'model building' 'QMEAN - Qualitative Model Energy ANalysis' 4.4.0
library https://git.scicore.unibas.ch/schwede/QMEAN 4
4 OpenStructure 'data processing'
'Open-Source Computational Structural Biology Framework' 2.10.0 package
https://openstructure.org/ 5
5 BLAST 'data collection' . 2.14.1 package https://blast.ncbi.nlm.nih.gov 6
6 HH-suite 'data collection' 'HH-suite3 for sensitive sequence searching' 3.2.0
package https://github.com/soedinglab/hh-suite 7
#
#
loop_
_ma_software_group.ordinal_id
_ma_software_group.group_id
_ma_software_group.software_id
_ma_software_group.parameter_group_id
1 1 6 .
2 2 1 .
3 2 4 .
4 2 5 .
5 2 6 .
6 3 1 .
7 3 4 .
8 4 1 .
9 4 2 .
10 4 4 .
11 5 3 .
12 6 1 .
13 6 3 .
14 6 4 .
#
#
loop_
_audit_author.name
_audit_author.pdbx_ordinal
'Bienert, S.' 1
'Waterhouse, A.' 2
'de Beer, T.A.P.' 3
'Tauriello, G.' 4
'Studer, G.' 5
'Bordoli, L.' 6
'Schwede, T.' 7
#
#
loop_
_chem_comp.id
_chem_comp.type
_chem_comp.name
_chem_comp.formula
_chem_comp.formula_weight
_chem_comp.ma_provenance
ALA 'L-peptide linking' ALANINE 'C3 H7 N O2' 89.094 'CCD Core'
ARG 'L-peptide linking' ARGININE 'C6 H15 N4 O2 1' 175.212 'CCD Core'
ASN 'L-peptide linking' ASPARAGINE 'C4 H8 N2 O3' 132.119 'CCD Core'
ASP 'L-peptide linking' 'ASPARTIC ACID' 'C4 H7 N O4' 133.103 'CCD Core'
CYS 'L-peptide linking' CYSTEINE 'C3 H7 N O2 S' 121.154 'CCD Core'
GLN 'L-peptide linking' GLUTAMINE 'C5 H10 N2 O3' 146.146 'CCD Core'
GLU 'L-peptide linking' 'GLUTAMIC ACID' 'C5 H9 N O4' 147.130 'CCD Core'
GLY 'peptide linking' GLYCINE 'C2 H5 N O2' 75.067 'CCD Core'
HIS 'L-peptide linking' HISTIDINE 'C6 H10 N3 O2 1' 156.165 'CCD Core'
ILE 'L-peptide linking' ISOLEUCINE 'C6 H13 N O2' 131.175 'CCD Core'
LEU 'L-peptide linking' LEUCINE 'C6 H13 N O2' 131.175 'CCD Core'
LYS 'L-peptide linking' LYSINE 'C6 H15 N2 O2 1' 147.198 'CCD Core'
MET 'L-peptide linking' METHIONINE 'C5 H11 N O2 S' 149.208 'CCD Core'
PHE 'L-peptide linking' PHENYLALANINE 'C9 H11 N O2' 165.192 'CCD Core'
PRO 'L-peptide linking' PROLINE 'C5 H9 N O2' 115.132 'CCD Core'
SER 'L-peptide linking' SERINE 'C3 H7 N O3' 105.093 'CCD Core'
THR 'L-peptide linking' THREONINE 'C4 H9 N O3' 119.120 'CCD Core'
TRP 'L-peptide linking' TRYPTOPHAN 'C11 H12 N2 O2' 204.229 'CCD Core'
TYR 'L-peptide linking' TYROSINE 'C9 H11 N O3' 181.191 'CCD Core'
VAL 'L-peptide linking' VALINE 'C5 H11 N O2' 117.148 'CCD Core'
#
#
loop_
_entity.id
_entity.type
_entity.src_method
_entity.pdbx_description
_entity.formula_weight
_entity.pdbx_number_of_molecules
_entity.details
1 polymer man . 3402.667 1 .
#
#
loop_
_struct_ref.id
_struct_ref.entity_id
_struct_ref.db_name
_struct_ref.db_code
_struct_ref.pdbx_db_accession
_struct_ref.pdbx_align_begin
_struct_ref.pdbx_seq_one_letter_code
_struct_ref.details
1 1 UNP PSAD_POPEU P84563 1 EAPVGFTPPELDPSTPSPIFGGSTGGLLR
'Photosystem I reaction center subunit II'
#
#
loop_
_struct_ref_seq.align_id
_struct_ref_seq.ref_id
_struct_ref_seq.seq_align_beg
_struct_ref_seq.seq_align_end
_struct_ref_seq.db_align_beg
_struct_ref_seq.db_align_end
1 1 1 29 1 29
#
#
loop_
_ma_target_ref_db_details.target_entity_id
_ma_target_ref_db_details.db_name
_ma_target_ref_db_details.db_name_other_details
_ma_target_ref_db_details.db_code
_ma_target_ref_db_details.db_accession
_ma_target_ref_db_details.seq_db_isoform
_ma_target_ref_db_details.seq_db_align_begin
_ma_target_ref_db_details.seq_db_align_end
_ma_target_ref_db_details.ncbi_taxonomy_id
_ma_target_ref_db_details.organism_scientific
_ma_target_ref_db_details.seq_db_sequence_version_date
_ma_target_ref_db_details.seq_db_sequence_checksum
_ma_target_ref_db_details.is_primary
1 UNP . PSAD_POPEU P84563 . 1 29 75702 'Populus euphratica (Euphrates poplar)'
2005-07-05 06416AEC6A4EF78E .
#
#
loop_
_entity_poly.entity_id
_entity_poly.type
_entity_poly.nstd_linkage
_entity_poly.nstd_monomer
_entity_poly.pdbx_strand_id
_entity_poly.pdbx_seq_one_letter_code
_entity_poly.pdbx_seq_one_letter_code_can
1 polypeptide(L) no no D EAPVGFTPPELDPSTPSPIFGGSTGGLLR
EAPVGFTPPELDPSTPSPIFGGSTGGLLR
#
#
loop_
_entity_poly_seq.entity_id
_entity_poly_seq.num
_entity_poly_seq.mon_id
_entity_poly_seq.hetero
1 1 GLU .
1 2 ALA .
1 3 PRO .
1 4 VAL .
1 5 GLY .
1 6 PHE .
1 7 THR .
1 8 PRO .
1 9 PRO .
1 10 GLU .
1 11 LEU .
1 12 ASP .
1 13 PRO .
1 14 SER .
1 15 THR .
1 16 PRO .
1 17 SER .
1 18 PRO .
1 19 ILE .
1 20 PHE .
1 21 GLY .
1 22 GLY .
1 23 SER .
1 24 THR .
1 25 GLY .
1 26 GLY .
1 27 LEU .
1 28 LEU .
1 29 ARG .
#
#
loop_
_struct_asym.id
_struct_asym.entity_id
_struct_asym.details
A 1 .
#
#
loop_
_pdbx_poly_seq_scheme.asym_id
_pdbx_poly_seq_scheme.entity_id
_pdbx_poly_seq_scheme.seq_id
_pdbx_poly_seq_scheme.mon_id
_pdbx_poly_seq_scheme.pdb_seq_num
_pdbx_poly_seq_scheme.auth_seq_num
_pdbx_poly_seq_scheme.pdb_mon_id
_pdbx_poly_seq_scheme.auth_mon_id
_pdbx_poly_seq_scheme.pdb_strand_id
_pdbx_poly_seq_scheme.pdb_ins_code
A 1 1 GLU 1 ? ? ? D .
A 1 2 ALA 2 ? ? ? D .
A 1 3 PRO 3 ? ? ? D .
A 1 4 VAL 4 ? ? ? D .
A 1 5 GLY 5 5 GLY GLY D .
A 1 6 PHE 6 6 PHE PHE D .
A 1 7 THR 7 7 THR THR D .
A 1 8 PRO 8 8 PRO PRO D .
A 1 9 PRO 9 9 PRO PRO D .
A 1 10 GLU 10 10 GLU GLU D .
A 1 11 LEU 11 11 LEU LEU D .
A 1 12 ASP 12 12 ASP ASP D .
A 1 13 PRO 13 13 PRO PRO D .
A 1 14 SER 14 14 SER SER D .
A 1 15 THR 15 15 THR THR D .
A 1 16 PRO 16 16 PRO PRO D .
A 1 17 SER 17 17 SER SER D .
A 1 18 PRO 18 18 PRO PRO D .
A 1 19 ILE 19 19 ILE ILE D .
A 1 20 PHE 20 20 PHE PHE D .
A 1 21 GLY 21 21 GLY GLY D .
A 1 22 GLY 22 22 GLY GLY D .
A 1 23 SER 23 23 SER SER D .
A 1 24 THR 24 24 THR THR D .
A 1 25 GLY 25 25 GLY GLY D .
A 1 26 GLY 26 26 GLY GLY D .
A 1 27 LEU 27 27 LEU LEU D .
A 1 28 LEU 28 28 LEU LEU D .
A 1 29 ARG 29 29 ARG ARG D .
#
#
loop_
_ma_data.id
_ma_data.name
_ma_data.content_type
_ma_data.content_type_other_details
1
'Photosystem I reaction center subunit II, chloroplastic {PDB ID=8bcw, label_asym_id=D, auth_asym_id=D, SMTL ID=8bcw.1.D}'
'template structure' .
2 . target .
3 'Target-template alignment by HHblits to 8bcw, label_asym_id=D'
'target-template alignment' .
4 'model 1' 'model coordinates' .
5 SMTL 'reference database' .
6 PDB 'reference database' .
7 'Template search output' other 'Results of the sequence search'
#
#
loop_
_ma_data_group.ordinal_id
_ma_data_group.group_id
_ma_data_group.data_id
1 1 2
2 1 5
3 1 6
4 2 7
5 3 2
6 3 1
7 3 3
8 4 1
9 4 3
10 5 4
#
#
loop_
_ma_data_ref_db.data_id
_ma_data_ref_db.name
_ma_data_ref_db.location_url
_ma_data_ref_db.version
_ma_data_ref_db.release_date
5 SMTL https://swissmodel.expasy.org/templates/ . 2025-06-25
6 PDB https://www.wwpdb.org . 2025-06-20
#
#
loop_
_ma_target_entity.entity_id
_ma_target_entity.data_id
_ma_target_entity.origin
1 2 'reference database'
#
#
loop_
_ma_target_entity_instance.asym_id
_ma_target_entity_instance.entity_id
_ma_target_entity_instance.details
A 1 .
#
#
loop_
_ma_template_trans_matrix.id
_ma_template_trans_matrix.rot_matrix[1][1]
_ma_template_trans_matrix.rot_matrix[2][1]
_ma_template_trans_matrix.rot_matrix[3][1]
_ma_template_trans_matrix.rot_matrix[1][2]
_ma_template_trans_matrix.rot_matrix[2][2]
_ma_template_trans_matrix.rot_matrix[3][2]
_ma_template_trans_matrix.rot_matrix[1][3]
_ma_template_trans_matrix.rot_matrix[2][3]
_ma_template_trans_matrix.rot_matrix[3][3]
_ma_template_trans_matrix.tr_vector[1]
_ma_template_trans_matrix.tr_vector[2]
_ma_template_trans_matrix.tr_vector[3]
1 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000
1.000000 0 0 0
#
#
loop_
_ma_template_details.ordinal_id
_ma_template_details.template_id
_ma_template_details.template_origin
_ma_template_details.template_entity_type
_ma_template_details.template_trans_matrix_id
_ma_template_details.template_data_id
_ma_template_details.target_asym_id
_ma_template_details.template_label_asym_id
_ma_template_details.template_label_entity_id
_ma_template_details.template_model_num
_ma_template_details.template_auth_asym_id
1 1 'reference database' polymer 1 1 A D 4 1 D
#
#
loop_
_ma_template_poly.template_id
_ma_template_poly.seq_one_letter_code
_ma_template_poly.seq_one_letter_code_can
1
;MAMATQASAATRHLITAAWSPSSKPRAVSLALPSTRGPAPLCAAASDSPAPATKEPEAAPAPAGFVPPQL
DPSTPSPIFGGSTGGLLRKAQVEEFYVITWTSPKEQVFEMPTGGAAIMREGPNLLKLARKEQCLALGNRL
RSKYKIAYQFYRVFPNGEVQYLHPKDGVYPEKVNAGRQGVGQNFRSIGKNVSPIEVKFTGKNTFDV
;

;MAMATQASAATRHLITAAWSPSSKPRAVSLALPSTRGPAPLCAAASDSPAPATKEPEAAPAPAGFVPPQL
DPSTPSPIFGGSTGGLLRKAQVEEFYVITWTSPKEQVFEMPTGGAAIMREGPNLLKLARKEQCLALGNRL
RSKYKIAYQFYRVFPNGEVQYLHPKDGVYPEKVNAGRQGVGQNFRSIGKNVSPIEVKFTGKNTFDV
;

#
#
loop_
_ma_template_poly_segment.id
_ma_template_poly_segment.template_id
_ma_template_poly_segment.residue_number_begin
_ma_template_poly_segment.residue_number_end
1 1 60 88
#
#
loop_
_ma_template_ref_db_details.template_id
_ma_template_ref_db_details.db_name
_ma_template_ref_db_details.db_name_other_details
_ma_template_ref_db_details.db_accession_code
_ma_template_ref_db_details.db_version_date
1 PDB . 8bcw 2023-11-01
#
#
loop_
_ma_target_template_poly_mapping.id
_ma_target_template_poly_mapping.template_segment_id
_ma_target_template_poly_mapping.target_asym_id
_ma_target_template_poly_mapping.target_seq_id_begin
_ma_target_template_poly_mapping.target_seq_id_end
1 1 A 1 29
#
#
loop_
_ma_alignment_info.alignment_id
_ma_alignment_info.data_id
_ma_alignment_info.software_group_id
_ma_alignment_info.alignment_length
_ma_alignment_info.alignment_type
_ma_alignment_info.alignment_mode
1 3 1 29 'target-template pairwise alignment' local
#
#
loop_
_ma_alignment_details.ordinal_id
_ma_alignment_details.alignment_id
_ma_alignment_details.template_segment_id
_ma_alignment_details.target_asym_id
_ma_alignment_details.score_type
_ma_alignment_details.score_type_other_details
_ma_alignment_details.score_value
_ma_alignment_details.percent_sequence_identity
_ma_alignment_details.sequence_identity_denominator
_ma_alignment_details.sequence_identity_denominator_other_details
1 1 1 A 'HHblits e-value' . 3.6e-13 86.207
'Number of aligned residue pairs (not including the gaps)' .
#
#
loop_
_ma_alignment.ordinal_id
_ma_alignment.alignment_id
_ma_alignment.target_template_flag
_ma_alignment.sequence
1 1 1 EAPVGFTPPELDPSTPSPIFGGSTGGLLR
2 1 2 PAPAGFVPPQLDPSTPSPIFGGSTGGLLR
#
#
loop_
_ma_protocol_step.ordinal_id
_ma_protocol_step.protocol_id
_ma_protocol_step.step_id
_ma_protocol_step.method_type
_ma_protocol_step.step_name
_ma_protocol_step.details
_ma_protocol_step.software_group_id
_ma_protocol_step.input_data_group_id
_ma_protocol_step.output_data_group_id
1 1 1 'template search' 'template search' 'SWISS-MODEL template search in PDB' 2
1 2
2 1 2 'template selection' 'template selection'
'Automatic template selection by SWISS-MODEL {QSQE=0.000}' 3 2 4
3 1 3 modeling 'homology modeling'
'SWISS-MODEL auto-model mode using ProMod3 on 8bcw.1' 4 3 5
#
#
loop_
_ma_model_list.ordinal_id
_ma_model_list.model_name
_ma_model_list.data_id
_ma_model_list.model_type
_ma_model_list.model_type_other_details
1 'model 1' 4 'Homology model' .
#
#
loop_
_ma_model_group.id
_ma_model_group.name
_ma_model_group.details
1 . .
#
#
loop_
_ma_model_group_link.group_id
_ma_model_group_link.model_id
1 1
#
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_alt_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.auth_seq_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.label_entity_id
_atom_site.auth_asym_id
_atom_site.auth_comp_id
_atom_site.B_iso_or_equiv
_atom_site.pdbx_PDB_model_num
ATOM 1 N N . GLY 5 5 ? A 109.153 179.242 165.709 1 1 D GLY 0.400 1
ATOM 2 C CA . GLY 5 5 ? A 110.628 178.967 165.498 1 1 D GLY 0.400 1
ATOM 3 C C . GLY 5 5 ? A 111.407 179.233 166.753 1 1 D GLY 0.400 1
ATOM 4 O O . GLY 5 5 ? A 110.841 179.110 167.831 1 1 D GLY 0.400 1
ATOM 5 N N . PHE 6 6 ? A 112.692 179.615 166.652 1 1 D PHE 0.470 1
ATOM 6 C CA . PHE 6 6 ? A 113.535 179.908 167.790 1 1 D PHE 0.470 1
ATOM 7 C C . PHE 6 6 ? A 113.945 181.363 167.641 1 1 D PHE 0.470 1
ATOM 8 O O . PHE 6 6 ? A 114.351 181.790 166.565 1 1 D PHE 0.470 1
ATOM 9 C CB . PHE 6 6 ? A 114.772 178.962 167.785 1 1 D PHE 0.470 1
ATOM 10 C CG . PHE 6 6 ? A 115.800 179.318 168.829 1 1 D PHE 0.470 1
ATOM 11 C CD1 . PHE 6 6 ? A 115.581 179.036 170.185 1 1 D PHE 0.470 1
ATOM 12 C CD2 . PHE 6 6 ? A 116.980 179.984 168.456 1 1 D PHE 0.470 1
ATOM 13 C CE1 . PHE 6 6 ? A 116.531 179.399 171.150 1 1 D PHE 0.470 1
ATOM 14 C CE2 . PHE 6 6 ? A 117.934 180.339 169.416 1 1 D PHE 0.470 1
ATOM 15 C CZ . PHE 6 6 ? A 117.711 180.043 170.765 1 1 D PHE 0.470 1
ATOM 16 N N . THR 7 7 ? A 113.825 182.143 168.728 1 1 D THR 0.740 1
ATOM 17 C CA . THR 7 7 ? A 114.221 183.542 168.766 1 1 D THR 0.740 1
ATOM 18 C C . THR 7 7 ? A 115.507 183.582 169.565 1 1 D THR 0.740 1
ATOM 19 O O . THR 7 7 ? A 115.460 183.197 170.735 1 1 D THR 0.740 1
ATOM 20 C CB . THR 7 7 ? A 113.198 184.434 169.459 1 1 D THR 0.740 1
ATOM 21 O OG1 . THR 7 7 ? A 111.984 184.426 168.720 1 1 D THR 0.740 1
ATOM 22 C CG2 . THR 7 7 ? A 113.659 185.898 169.519 1 1 D THR 0.740 1
ATOM 23 N N . PRO 8 8 ? A 116.672 183.972 169.040 1 1 D PRO 0.720 1
ATOM 24 C CA . PRO 8 8 ? A 117.920 183.998 169.799 1 1 D PRO 0.720 1
ATOM 25 C C . PRO 8 8 ? A 117.841 184.961 170.987 1 1 D PRO 0.720 1
ATOM 26 O O . PRO 8 8 ? A 117.204 186.002 170.829 1 1 D PRO 0.720 1
ATOM 27 C CB . PRO 8 8 ? A 118.986 184.421 168.765 1 1 D PRO 0.720 1
ATOM 28 C CG . PRO 8 8 ? A 118.196 185.137 167.664 1 1 D PRO 0.720 1
ATOM 29 C CD . PRO 8 8 ? A 116.857 184.406 167.656 1 1 D PRO 0.720 1
ATOM 30 N N . PRO 9 9 ? A 118.408 184.686 172.161 1 1 D PRO 0.780 1
ATOM 31 C CA . PRO 9 9 ? A 118.371 185.604 173.290 1 1 D PRO 0.780 1
ATOM 32 C C . PRO 9 9 ? A 119.195 186.852 173.037 1 1 D PRO 0.780 1
ATOM 33 O O . PRO 9 9 ? A 120.215 186.800 172.346 1 1 D PRO 0.780 1
ATOM 34 C CB . PRO 9 9 ? A 118.943 184.780 174.459 1 1 D PRO 0.780 1
ATOM 35 C CG . PRO 9 9 ? A 119.859 183.752 173.786 1 1 D PRO 0.780 1
ATOM 36 C CD . PRO 9 9 ? A 119.148 183.464 172.465 1 1 D PRO 0.780 1
ATOM 37 N N . GLU 10 10 ? A 118.756 187.996 173.587 1 1 D GLU 0.660 1
ATOM 38 C CA . GLU 10 10 ? A 119.465 189.246 173.495 1 1 D GLU 0.660 1
ATOM 39 C C . GLU 10 10 ? A 120.550 189.311 174.547 1 1 D GLU 0.660 1
ATOM 40 O O . GLU 10 10 ? A 120.435 188.758 175.643 1 1 D GLU 0.660 1
ATOM 41 C CB . GLU 10 10 ? A 118.487 190.429 173.638 1 1 D GLU 0.660 1
ATOM 42 C CG . GLU 10 10 ? A 117.458 190.479 172.483 1 1 D GLU 0.660 1
ATOM 43 C CD . GLU 10 10 ? A 116.498 191.662 172.592 1 1 D GLU 0.660 1
ATOM 44 O OE1 . GLU 10 10 ? A 116.514 192.359 173.638 1 1 D GLU 0.660 1
ATOM 45 O OE2 . GLU 10 10 ? A 115.736 191.867 171.614 1 1 D GLU 0.660 1
ATOM 46 N N . LEU 11 11 ? A 121.670 189.974 174.226 1 1 D LEU 0.520 1
ATOM 47 C CA . LEU 11 11 ? A 122.767 190.126 175.151 1 1 D LEU 0.520 1
ATOM 48 C C . LEU 11 11 ? A 122.526 191.306 176.078 1 1 D LEU 0.520 1
ATOM 49 O O . LEU 11 11 ? A 122.403 192.444 175.628 1 1 D LEU 0.520 1
ATOM 50 C CB . LEU 11 11 ? A 124.092 190.318 174.378 1 1 D LEU 0.520 1
ATOM 51 C CG . LEU 11 11 ? A 125.360 190.377 175.255 1 1 D LEU 0.520 1
ATOM 52 C CD1 . LEU 11 11 ? A 125.579 189.082 176.058 1 1 D LEU 0.520 1
ATOM 53 C CD2 . LEU 11 11 ? A 126.588 190.685 174.386 1 1 D LEU 0.520 1
ATOM 54 N N . ASP 12 12 ? A 122.468 191.057 177.402 1 1 D ASP 0.560 1
ATOM 55 C CA . ASP 12 12 ? A 122.282 192.089 178.393 1 1 D ASP 0.560 1
ATOM 56 C C . ASP 12 12 ? A 123.675 192.619 178.796 1 1 D ASP 0.560 1
ATOM 57 O O . ASP 12 12 ? A 124.515 191.823 179.224 1 1 D ASP 0.560 1
ATOM 58 C CB . ASP 12 12 ? A 121.468 191.508 179.584 1 1 D ASP 0.560 1
ATOM 59 C CG . ASP 12 12 ? A 120.923 192.607 180.487 1 1 D ASP 0.560 1
ATOM 60 O OD1 . ASP 12 12 ? A 121.253 193.796 180.234 1 1 D ASP 0.560 1
ATOM 61 O OD2 . ASP 12 12 ? A 120.150 192.264 181.414 1 1 D ASP 0.560 1
ATOM 62 N N . PRO 13 13 ? A 124.015 193.907 178.642 1 1 D PRO 0.730 1
ATOM 63 C CA . PRO 13 13 ? A 125.325 194.434 178.993 1 1 D PRO 0.730 1
ATOM 64 C C . PRO 13 13 ? A 125.442 194.729 180.483 1 1 D PRO 0.730 1
ATOM 65 O O . PRO 13 13 ? A 126.537 195.068 180.918 1 1 D PRO 0.730 1
ATOM 66 C CB . PRO 13 13 ? A 125.446 195.716 178.146 1 1 D PRO 0.730 1
ATOM 67 C CG . PRO 13 13 ? A 124.002 196.192 177.990 1 1 D PRO 0.730 1
ATOM 68 C CD . PRO 13 13 ? A 123.220 194.882 177.898 1 1 D PRO 0.730 1
ATOM 69 N N . SER 14 14 ? A 124.363 194.635 181.297 1 1 D SER 0.770 1
ATOM 70 C CA . SER 14 14 ? A 124.419 194.972 182.719 1 1 D SER 0.770 1
ATOM 71 C C . SER 14 14 ? A 124.639 193.734 183.585 1 1 D SER 0.770 1
ATOM 72 O O . SER 14 14 ? A 124.522 193.769 184.805 1 1 D SER 0.770 1
ATOM 73 C CB . SER 14 14 ? A 123.146 195.732 183.200 1 1 D SER 0.770 1
ATOM 74 O OG . SER 14 14 ? A 121.980 194.917 183.099 1 1 D SER 0.770 1
ATOM 75 N N . THR 15 15 ? A 125.009 192.600 182.948 1 1 D THR 0.680 1
ATOM 76 C CA . THR 15 15 ? A 125.212 191.317 183.623 1 1 D THR 0.680 1
ATOM 77 C C . THR 15 15 ? A 126.523 191.300 184.403 1 1 D THR 0.680 1
ATOM 78 O O . THR 15 15 ? A 127.560 191.593 183.807 1 1 D THR 0.680 1
ATOM 79 C CB . THR 15 15 ? A 125.194 190.121 182.678 1 1 D THR 0.680 1
ATOM 80 O OG1 . THR 15 15 ? A 123.941 190.055 182.018 1 1 D THR 0.680 1
ATOM 81 C CG2 . THR 15 15 ? A 125.303 188.780 183.420 1 1 D THR 0.680 1
ATOM 82 N N . PRO 16 16 ? A 126.593 190.998 185.705 1 1 D PRO 0.670 1
ATOM 83 C CA . PRO 16 16 ? A 127.856 190.901 186.436 1 1 D PRO 0.670 1
ATOM 84 C C . PRO 16 16 ? A 128.818 189.836 185.928 1 1 D PRO 0.670 1
ATOM 85 O O . PRO 16 16 ? A 128.387 188.820 185.383 1 1 D PRO 0.670 1
ATOM 86 C CB . PRO 16 16 ? A 127.443 190.594 187.891 1 1 D PRO 0.670 1
ATOM 87 C CG . PRO 16 16 ? A 125.967 190.995 187.974 1 1 D PRO 0.670 1
ATOM 88 C CD . PRO 16 16 ? A 125.446 190.724 186.565 1 1 D PRO 0.670 1
ATOM 89 N N . SER 17 17 ? A 130.130 190.031 186.150 1 1 D SER 0.830 1
ATOM 90 C CA . SER 17 17 ? A 131.173 189.106 185.730 1 1 D SER 0.830 1
ATOM 91 C C . SER 17 17 ? A 131.654 188.323 186.937 1 1 D SER 0.830 1
ATOM 92 O O . SER 17 17 ? A 131.481 188.804 188.059 1 1 D SER 0.830 1
ATOM 93 C CB . SER 17 17 ? A 132.384 189.840 185.103 1 1 D SER 0.830 1
ATOM 94 O OG . SER 17 17 ? A 132.028 190.297 183.798 1 1 D SER 0.830 1
ATOM 95 N N . PRO 18 18 ? A 132.234 187.126 186.814 1 1 D PRO 0.810 1
ATOM 96 C CA . PRO 18 18 ? A 132.848 186.411 187.930 1 1 D PRO 0.810 1
ATOM 97 C C . PRO 18 18 ? A 133.914 187.177 188.694 1 1 D PRO 0.810 1
ATOM 98 O O . PRO 18 18 ? A 134.581 188.047 188.126 1 1 D PRO 0.810 1
ATOM 99 C CB . PRO 18 18 ? A 133.439 185.135 187.301 1 1 D PRO 0.810 1
ATOM 100 C CG . PRO 18 18 ? A 132.678 184.966 185.983 1 1 D PRO 0.810 1
ATOM 101 C CD . PRO 18 18 ? A 132.406 186.405 185.553 1 1 D PRO 0.810 1
ATOM 102 N N . ILE 19 19 ? A 134.118 186.848 189.980 1 1 D ILE 0.820 1
ATOM 103 C CA . ILE 19 19 ? A 135.124 187.471 190.819 1 1 D ILE 0.820 1
ATOM 104 C C . ILE 19 19 ? A 136.488 186.902 190.466 1 1 D ILE 0.820 1
ATOM 105 O O . ILE 19 19 ? A 136.729 185.699 190.566 1 1 D ILE 0.820 1
ATOM 106 C CB . ILE 19 19 ? A 134.809 187.291 192.304 1 1 D ILE 0.820 1
ATOM 107 C CG1 . ILE 19 19 ? A 133.361 187.770 192.604 1 1 D ILE 0.820 1
ATOM 108 C CG2 . ILE 19 19 ? A 135.859 188.056 193.147 1 1 D ILE 0.820 1
ATOM 109 C CD1 . ILE 19 19 ? A 132.899 187.520 194.046 1 1 D ILE 0.820 1
ATOM 110 N N . PHE 20 20 ? A 137.418 187.756 190.009 1 1 D PHE 0.810 1
ATOM 111 C CA . PHE 20 20 ? A 138.685 187.304 189.498 1 1 D PHE 0.810 1
ATOM 112 C C . PHE 20 20 ? A 139.718 188.367 189.815 1 1 D PHE 0.810 1
ATOM 113 O O . PHE 20 20 ? A 139.415 189.558 189.811 1 1 D PHE 0.810 1
ATOM 114 C CB . PHE 20 20 ? A 138.553 187.074 187.966 1 1 D PHE 0.810 1
ATOM 115 C CG . PHE 20 20 ? A 139.751 186.396 187.361 1 1 D PHE 0.810 1
ATOM 116 C CD1 . PHE 20 20 ? A 140.209 185.176 187.881 1 1 D PHE 0.810 1
ATOM 117 C CD2 . PHE 20 20 ? A 140.417 186.957 186.258 1 1 D PHE 0.810 1
ATOM 118 C CE1 . PHE 20 20 ? A 141.325 184.539 187.328 1 1 D PHE 0.810 1
ATOM 119 C CE2 . PHE 20 20 ? A 141.529 186.315 185.695 1 1 D PHE 0.810 1
ATOM 120 C CZ . PHE 20 20 ? A 141.986 185.108 186.235 1 1 D PHE 0.810 1
ATOM 121 N N . GLY 21 21 ? A 140.970 187.957 190.124 1 1 D GLY 0.750 1
ATOM 122 C CA . GLY 21 21 ? A 142.057 188.871 190.468 1 1 D GLY 0.750 1
ATOM 123 C C . GLY 21 21 ? A 142.792 189.468 189.291 1 1 D GLY 0.750 1
ATOM 124 O O . GLY 21 21 ? A 143.661 190.303 189.455 1 1 D GLY 0.750 1
ATOM 125 N N . GLY 22 22 ? A 142.445 189.027 188.060 1 1 D GLY 0.690 1
ATOM 126 C CA . GLY 22 22 ? A 143.147 189.416 186.844 1 1 D GLY 0.690 1
ATOM 127 C C . GLY 22 22 ? A 144.288 188.487 186.515 1 1 D GLY 0.690 1
ATOM 128 O O . GLY 22 22 ? A 144.744 187.689 187.337 1 1 D GLY 0.690 1
ATOM 129 N N . SER 23 23 ? A 144.777 188.533 185.268 1 1 D SER 0.770 1
ATOM 130 C CA . SER 23 23 ? A 145.840 187.661 184.811 1 1 D SER 0.770 1
ATOM 131 C C . SER 23 23 ? A 146.460 188.275 183.580 1 1 D SER 0.770 1
ATOM 132 O O . SER 23 23 ? A 145.969 189.278 183.058 1 1 D SER 0.770 1
ATOM 133 C CB . SER 23 23 ? A 145.390 186.196 184.490 1 1 D SER 0.770 1
ATOM 134 O OG . SER 23 23 ? A 144.541 186.109 183.339 1 1 D SER 0.770 1
ATOM 135 N N . THR 24 24 ? A 147.554 187.687 183.066 1 1 D THR 0.770 1
ATOM 136 C CA . THR 24 24 ? A 148.242 188.134 181.867 1 1 D THR 0.770 1
ATOM 137 C C . THR 24 24 ? A 147.754 187.395 180.625 1 1 D THR 0.770 1
ATOM 138 O O . THR 24 24 ? A 148.243 187.611 179.529 1 1 D THR 0.770 1
ATOM 139 C CB . THR 24 24 ? A 149.742 187.884 181.984 1 1 D THR 0.770 1
ATOM 140 O OG1 . THR 24 24 ? A 150.012 186.555 182.416 1 1 D THR 0.770 1
ATOM 141 C CG2 . THR 24 24 ? A 150.326 188.803 183.066 1 1 D THR 0.770 1
ATOM 142 N N . GLY 25 25 ? A 146.742 186.504 180.787 1 1 D GLY 0.740 1
ATOM 143 C CA . GLY 25 25 ? A 146.200 185.656 179.726 1 1 D GLY 0.740 1
ATOM 144 C C . GLY 25 25 ? A 144.880 186.137 179.184 1 1 D GLY 0.740 1
ATOM 145 O O . GLY 25 25 ? A 144.147 185.383 178.567 1 1 D GLY 0.740 1
ATOM 146 N N . GLY 26 26 ? A 144.522 187.406 179.478 1 1 D GLY 0.660 1
ATOM 147 C CA . GLY 26 26 ? A 143.274 188.013 179.024 1 1 D GLY 0.660 1
ATOM 148 C C . GLY 26 26 ? A 143.303 188.559 177.611 1 1 D GLY 0.660 1
ATOM 149 O O . GLY 26 26 ? A 144.048 188.117 176.743 1 1 D GLY 0.660 1
ATOM 150 N N . LEU 27 27 ? A 142.431 189.552 177.338 1 1 D LEU 0.560 1
ATOM 151 C CA . LEU 27 27 ? A 142.335 190.230 176.055 1 1 D LEU 0.560 1
ATOM 152 C C . LEU 27 27 ? A 143.559 191.045 175.660 1 1 D LEU 0.560 1
ATOM 153 O O . LEU 27 27 ? A 144.295 191.567 176.499 1 1 D LEU 0.560 1
ATOM 154 C CB . LEU 27 27 ? A 141.094 191.150 175.961 1 1 D LEU 0.560 1
ATOM 155 C CG . LEU 27 27 ? A 139.745 190.472 176.278 1 1 D LEU 0.560 1
ATOM 156 C CD1 . LEU 27 27 ? A 138.623 191.514 176.156 1 1 D LEU 0.560 1
ATOM 157 C CD2 . LEU 27 27 ? A 139.447 189.262 175.375 1 1 D LEU 0.560 1
ATOM 158 N N . LEU 28 28 ? A 143.777 191.184 174.343 1 1 D LEU 0.760 1
ATOM 159 C CA . LEU 28 28 ? A 144.839 191.981 173.776 1 1 D LEU 0.760 1
ATOM 160 C C . LEU 28 28 ? A 144.191 192.963 172.809 1 1 D LEU 0.760 1
ATOM 161 O O . LEU 28 28 ? A 143.014 193.272 172.941 1 1 D LEU 0.760 1
ATOM 162 C CB . LEU 28 28 ? A 145.944 191.082 173.152 1 1 D LEU 0.760 1
ATOM 163 C CG . LEU 28 28 ? A 146.830 190.382 174.210 1 1 D LEU 0.760 1
ATOM 164 C CD1 . LEU 28 28 ? A 147.773 189.371 173.540 1 1 D LEU 0.760 1
ATOM 165 C CD2 . LEU 28 28 ? A 147.638 191.392 175.046 1 1 D LEU 0.760 1
ATOM 166 N N . ARG 29 29 ? A 144.992 193.519 171.881 1 1 D ARG 0.490 1
ATOM 167 C CA . ARG 29 29 ? A 144.569 194.496 170.893 1 1 D ARG 0.490 1
ATOM 168 C C . ARG 29 29 ? A 143.699 193.920 169.733 1 1 D ARG 0.490 1
ATOM 169 O O . ARG 29 29 ? A 143.578 192.675 169.619 1 1 D ARG 0.490 1
ATOM 170 C CB . ARG 29 29 ? A 145.831 195.115 170.230 1 1 D ARG 0.490 1
ATOM 171 C CG . ARG 29 29 ? A 145.614 196.551 169.711 1 1 D ARG 0.490 1
ATOM 172 C CD . ARG 29 29 ? A 146.452 196.862 168.473 1 1 D ARG 0.490 1
ATOM 173 N NE . ARG 29 29 ? A 146.076 198.248 168.020 1 1 D ARG 0.490 1
ATOM 174 C CZ . ARG 29 29 ? A 146.351 198.736 166.803 1 1 D ARG 0.490 1
ATOM 175 N NH1 . ARG 29 29 ? A 147.032 198.014 165.918 1 1 D ARG 0.490 1
ATOM 176 N NH2 . ARG 29 29 ? A 145.927 199.948 166.450 1 1 D ARG 0.490 1
ATOM 177 O OXT . ARG 29 29 ? A 143.211 194.747 168.910 1 1 D ARG 0.490 1
#
#
loop_
_atom_type.symbol
C
N
O
#
#
loop_
_ma_qa_metric.id
_ma_qa_metric.name
_ma_qa_metric.description
_ma_qa_metric.type
_ma_qa_metric.mode
_ma_qa_metric.type_other_details
_ma_qa_metric.software_group_id
1 QMEANDisCo 'Predicted accuracy according to all-atom lDDT in [0,1].'
'pLDDT all-atom in [0,1]' local . 5
2 QMEANDisCo 'Predicted accuracy according to all-atom lDDT in [0,1].'
'pLDDT all-atom in [0,1]' global . 5
3 GMQE
'Global Model Quality Estimate of the model accuracy, calculated by SWISS-MODEL.'
'normalized score' global . 6
#
#
loop_
_ma_qa_metric_global.ordinal_id
_ma_qa_metric_global.model_id
_ma_qa_metric_global.metric_id
_ma_qa_metric_global.metric_value
1 1 2 0.686
2 1 3 0.647
#
#
loop_
_ma_qa_metric_local.ordinal_id
_ma_qa_metric_local.model_id
_ma_qa_metric_local.label_asym_id
_ma_qa_metric_local.label_seq_id
_ma_qa_metric_local.label_comp_id
_ma_qa_metric_local.metric_id
_ma_qa_metric_local.metric_value
1 1 A 5 GLY 1 0.400
2 1 A 6 PHE 1 0.470
3 1 A 7 THR 1 0.740
4 1 A 8 PRO 1 0.720
5 1 A 9 PRO 1 0.780
6 1 A 10 GLU 1 0.660
7 1 A 11 LEU 1 0.520
8 1 A 12 ASP 1 0.560
9 1 A 13 PRO 1 0.730
10 1 A 14 SER 1 0.770
11 1 A 15 THR 1 0.680
12 1 A 16 PRO 1 0.670
13 1 A 17 SER 1 0.830
14 1 A 18 PRO 1 0.810
15 1 A 19 ILE 1 0.820
16 1 A 20 PHE 1 0.810
17 1 A 21 GLY 1 0.750
18 1 A 22 GLY 1 0.690
19 1 A 23 SER 1 0.770
20 1 A 24 THR 1 0.770
21 1 A 25 GLY 1 0.740
22 1 A 26 GLY 1 0.660
23 1 A 27 LEU 1 0.560
24 1 A 28 LEU 1 0.760
25 1 A 29 ARG 1 0.490
#
#
loop_
_pdbx_data_usage.id
_pdbx_data_usage.type
_pdbx_data_usage.details
_pdbx_data_usage.url
1 license
;This SWISS-MODEL protein model is copyright.
It is produced by the SWISS-MODEL server, developed by the Computational
Structural Biology Group at the SIB Swiss Institute of Bioinformatics at the
Biozentrum, University of Basel (https://swissmodel.expasy.org). This
model is licensed under the CC BY-SA 4.0 Creative Commons
Attribution-ShareAlike 4.0 International License
(https://creativecommons.org/licenses/by-sa/4.0/legalcode), i.e. you
can copy and redistribute the model in any medium or format,
transform and build upon the model for any purpose, even
commercially, under the following terms:
Attribution - You must give appropriate credit, provide a link to
the license, and indicate if changes were made. You may do so in any
reasonable manner, but not in any way that suggests the licensor
endorses you or your use. When you publish, patent or distribute
results that were fully or partially based on the model, please cite
the corresponding papers mentioned under JRNL.
ShareAlike - If you remix, transform, or build upon the material,
you must distribute your contributions under the same license as the
original.
No additional restrictions - you may not apply legal terms or
technological measures that legally restrict others from doing
anything the license permits.
Find a human-readable summary of (and not a substitute for) the
CC BY-SA 4.0 license at this link:
https://creativecommons.org/licenses/by-sa/4.0/
;
https://creativecommons.org/licenses/by-sa/4.0/legalcode
2 disclaimer
;The SWISS-MODEL SERVER produces theoretical models for
proteins. The results of any theoretical modelling procedure is
NON-EXPERIMENTAL and MUST be considered with care. These models may
contain significant errors. This is especially true for automated
modeling since there is no human intervention during model
building. Please read the header section and the logfile carefully
to know what templates and alignments were used during the model
building process. All information by the SWISS-MODEL SERVER is
provided "AS-IS", without any warranty, expressed or implied.
;
https://swissmodel.expasy.org/docs/terms_of_use#disclaimer
#