data_SMR-37f1a3995cd66797c560cf64b11c06d5_1
_entry.id SMR-37f1a3995cd66797c560cf64b11c06d5_1
_struct.entry_id SMR-37f1a3995cd66797c560cf64b11c06d5_1
_struct.pdbx_model_details
;This model was generated unsupervised by the SWISS-MODEL homology-modelling pipeline for the SWISS-MODEL Repository, a database of annotated 3D protein structure models. The modelled monomer covers following UniProtKB entries:

  - P85231/ VHL2_VIOHE, Leaf cyclotide 2

Estimated model accuracy of this model is 0.68, calculated by SWISS-MODEL as Global Model Quality Estimate (GMQE).
;
_struct.pdbx_structure_determination_methodology computational
_struct.title 'Model for UniProtKB entries P85231'
_audit_conform.dict_location https://raw.githubusercontent.com/ihmwg/ModelCIF/80e1e22/dist/mmcif_ma.dic
_audit_conform.dict_name mmcif_ma.dic
_audit_conform.dict_version 1.4.7
#
loop_
_citation.id
_citation.title
_citation.journal_abbrev
_citation.journal_volume
_citation.page_first
_citation.page_last
_citation.year
_citation.pdbx_database_id_PubMed
_citation.pdbx_database_id_DOI
primary 'The SWISS-MODEL Repository - new features and functionality'
'Nucleic Acids Res.' 45 D313 D319 2017 27899672 10.1093/nar/gkw1132
2 'SWISS-MODEL: homology modelling of protein structures and complexes'
'Nucleic Acids Res.' 46 W296 W303 2018 29788355 10.1093/nar/gky427
3 'ProMod3 - A versatile homology modelling toolbox' 'PLoS Comput. Biol.' 17(1)
1 18 2021 33507980 10.1371/journal.pcbi.1008667
4 'QMEANDisCo - distance constraints applied on model quality estimation'
Bioinformatics 36 1765 1771 2020 31697312 10.1093/bioinformatics/btz828
5
'OpenStructure: an integrated software framework for computational structural biology'
'Acta Crystallogr., Sect. D: Biol. Crystallogr.' 69 701 709 2013 23633579
10.1107/S0907444913007051
6 'BLAST+: architecture and applications' 'BMC Bioinf.' 10 421 . 2009 20003500
10.1186/1471-2105-10-421
7 'HH-suite3 for fast remote homology detection and deep protein annotation'
'BMC Bioinf.' 20 473 . 2019 31521110 10.1186/s12859-019-3019-7
#
#
loop_
_citation_author.citation_id
_citation_author.name
_citation_author.ordinal
primary 'Bienert, S.' 1
primary 'Waterhouse, A.' 2
primary 'de Beer, T.A.P.' 3
primary 'Tauriello, G.' 4
primary 'Studer, G.' 5
primary 'Bordoli, L.' 6
primary 'Schwede, T.' 7
2 'Waterhouse, A.' 8
2 'Bertoni, M.' 9
2 'Bienert, S.' 10
2 'Studer, G.' 11
2 'Tauriello, G.' 12
2 'Gumienny, R.' 13
2 'Heer, F.T.' 14
2 'de Beer, T.A.P.' 15
2 'Rempfer, C.' 16
2 'Bordoli, L.' 17
2 'Lepore, R.' 18
2 'Schwede, T.' 19
3 'Studer, G.' 20
3 'Tauriello, G.' 21
3 'Bienert, S.' 22
3 'Biasini, M.' 23
3 'Johner, N.' 24
3 'Schwede, T.' 25
4 'Studer, G.' 26
4 'Rempfer, C.' 27
4 'Waterhouse, A.M.' 28
4 'Gumienny, R.' 29
4 'Haas, J.' 30
4 'Schwede, T.' 31
5 'Biasini, M.' 32
5 'Schmidt, T.' 33
5 'Bienert, S.' 34
5 'Mariani, V.' 35
5 'Studer, G.' 36
5 'Haas, J.' 37
5 'Johner, N.' 38
5 'Schenk, A.D.' 39
5 'Philippsen, A.' 40
5 'Schwede, T.' 41
6 'Camacho, C.' 42
6 'Coulouris, G.' 43
6 'Avagyan, V.' 44
6 'Ma, N.' 45
6 'Papadopoulos, J.' 46
6 'Bealer, K.' 47
6 'Madden, T.L.' 48
7 'Steinegger, M.' 49
7 'Meier, M.' 50
7 'Mirdita, M.' 51
7 'Vohringer, H.' 52
7 'Haunsberger, S.J.' 53
7 'Soding, J.' 54
#
#
loop_
_software.pdbx_ordinal
_software.name
_software.classification
_software.description
_software.version
_software.type
_software.location
_software.citation_id
1 SWISS-MODEL 'model building' 'Homology modelling web service' 2025-06.3
package https://swissmodel.expasy.org 2
2 ProMod3 'model building' 'Modular homology modelling engine' 3.5.0 library
https://git.scicore.unibas.ch/schwede/ProMod3 3
3 QMEAN 'model building' 'QMEAN - Qualitative Model Energy ANalysis' 4.4.0
library https://git.scicore.unibas.ch/schwede/QMEAN 4
4 OpenStructure 'data processing'
'Open-Source Computational Structural Biology Framework' 2.10.0 package
https://openstructure.org/ 5
5 BLAST 'data collection' . 2.14.1 package https://blast.ncbi.nlm.nih.gov 6
6 HH-suite 'data collection' 'HH-suite3 for sensitive sequence searching' 3.2.0
package https://github.com/soedinglab/hh-suite 7
#
#
loop_
_ma_software_group.ordinal_id
_ma_software_group.group_id
_ma_software_group.software_id
_ma_software_group.parameter_group_id
1 1 6 .
2 2 1 .
3 2 4 .
4 2 5 .
5 2 6 .
6 3 1 .
7 3 4 .
8 4 1 .
9 4 2 .
10 4 4 .
11 5 3 .
12 6 1 .
13 6 3 .
14 6 4 .
#
#
loop_
_audit_author.name
_audit_author.pdbx_ordinal
'Bienert, S.' 1
'Waterhouse, A.' 2
'de Beer, T.A.P.' 3
'Tauriello, G.' 4
'Studer, G.' 5
'Bordoli, L.' 6
'Schwede, T.' 7
#
#
loop_
_chem_comp.id
_chem_comp.type
_chem_comp.name
_chem_comp.formula
_chem_comp.formula_weight
_chem_comp.ma_provenance
ALA 'L-peptide linking' ALANINE 'C3 H7 N O2' 89.094 'CCD Core'
ARG 'L-peptide linking' ARGININE 'C6 H15 N4 O2 1' 175.212 'CCD Core'
ASN 'L-peptide linking' ASPARAGINE 'C4 H8 N2 O3' 132.119 'CCD Core'
ASP 'L-peptide linking' 'ASPARTIC ACID' 'C4 H7 N O4' 133.103 'CCD Core'
CYS 'L-peptide linking' CYSTEINE 'C3 H7 N O2 S' 121.154 'CCD Core'
GLU 'L-peptide linking' 'GLUTAMIC ACID' 'C5 H9 N O4' 147.130 'CCD Core'
GLY 'peptide linking' GLYCINE 'C2 H5 N O2' 75.067 'CCD Core'
LEU 'L-peptide linking' LEUCINE 'C6 H13 N O2' 131.175 'CCD Core'
PHE 'L-peptide linking' PHENYLALANINE 'C9 H11 N O2' 165.192 'CCD Core'
PRO 'L-peptide linking' PROLINE 'C5 H9 N O2' 115.132 'CCD Core'
SER 'L-peptide linking' SERINE 'C3 H7 N O3' 105.093 'CCD Core'
THR 'L-peptide linking' THREONINE 'C4 H9 N O3' 119.120 'CCD Core'
TRP 'L-peptide linking' TRYPTOPHAN 'C11 H12 N2 O2' 204.229 'CCD Core'
TYR 'L-peptide linking' TYROSINE 'C9 H11 N O3' 181.191 'CCD Core'
VAL 'L-peptide linking' VALINE 'C5 H11 N O2' 117.148 'CCD Core'
#
#
loop_
_entity.id
_entity.type
_entity.src_method
_entity.pdbx_description
_entity.formula_weight
_entity.pdbx_number_of_molecules
_entity.details
1 polymer man . 3723.074 1 .
#
#
loop_
_struct_ref.id
_struct_ref.entity_id
_struct_ref.db_name
_struct_ref.db_code
_struct_ref.pdbx_db_accession
_struct_ref.pdbx_align_begin
_struct_ref.pdbx_seq_one_letter_code
_struct_ref.details
1 1 UNP VHL2_VIOHE P85231 1 GLPVCGETCFTGTCYTNGCTCDPWPVCTRN 'Leaf cyclotide 2'
#
#
loop_
_struct_ref_seq.align_id
_struct_ref_seq.ref_id
_struct_ref_seq.seq_align_beg
_struct_ref_seq.seq_align_end
_struct_ref_seq.db_align_beg
_struct_ref_seq.db_align_end
1 1 1 30 1 30
#
#
loop_
_ma_target_ref_db_details.target_entity_id
_ma_target_ref_db_details.db_name
_ma_target_ref_db_details.db_name_other_details
_ma_target_ref_db_details.db_code
_ma_target_ref_db_details.db_accession
_ma_target_ref_db_details.seq_db_isoform
_ma_target_ref_db_details.seq_db_align_begin
_ma_target_ref_db_details.seq_db_align_end
_ma_target_ref_db_details.ncbi_taxonomy_id
_ma_target_ref_db_details.organism_scientific
_ma_target_ref_db_details.seq_db_sequence_version_date
_ma_target_ref_db_details.seq_db_sequence_checksum
_ma_target_ref_db_details.is_primary
1 UNP . VHL2_VIOHE P85231 . 1 30 180952 'Viola hederacea (Australian violet)'
2007-09-11 AC596BCB2574C0FC .
#
#
loop_
_entity_poly.entity_id
_entity_poly.type
_entity_poly.nstd_linkage
_entity_poly.nstd_monomer
_entity_poly.pdbx_strand_id
_entity_poly.pdbx_seq_one_letter_code
_entity_poly.pdbx_seq_one_letter_code_can
1 polypeptide(L) no no A GLPVCGETCFTGTCYTNGCTCDPWPVCTRN
GLPVCGETCFTGTCYTNGCTCDPWPVCTRN
#
#
loop_
_entity_poly_seq.entity_id
_entity_poly_seq.num
_entity_poly_seq.mon_id
_entity_poly_seq.hetero
1 1 GLY .
1 2 LEU .
1 3 PRO .
1 4 VAL .
1 5 CYS .
1 6 GLY .
1 7 GLU .
1 8 THR .
1 9 CYS .
1 10 PHE .
1 11 THR .
1 12 GLY .
1 13 THR .
1 14 CYS .
1 15 TYR .
1 16 THR .
1 17 ASN .
1 18 GLY .
1 19 CYS .
1 20 THR .
1 21 CYS .
1 22 ASP .
1 23 PRO .
1 24 TRP .
1 25 PRO .
1 26 VAL .
1 27 CYS .
1 28 THR .
1 29 ARG .
1 30 ASN .
#
#
loop_
_struct_asym.id
_struct_asym.entity_id
_struct_asym.details
A 1 .
#
#
loop_
_pdbx_poly_seq_scheme.asym_id
_pdbx_poly_seq_scheme.entity_id
_pdbx_poly_seq_scheme.seq_id
_pdbx_poly_seq_scheme.mon_id
_pdbx_poly_seq_scheme.pdb_seq_num
_pdbx_poly_seq_scheme.auth_seq_num
_pdbx_poly_seq_scheme.pdb_mon_id
_pdbx_poly_seq_scheme.auth_mon_id
_pdbx_poly_seq_scheme.pdb_strand_id
_pdbx_poly_seq_scheme.pdb_ins_code
A 1 1 GLY 1 1 GLY GLY A .
A 1 2 LEU 2 2 LEU LEU A .
A 1 3 PRO 3 3 PRO PRO A .
A 1 4 VAL 4 4 VAL VAL A .
A 1 5 CYS 5 5 CYS CYS A .
A 1 6 GLY 6 6 GLY GLY A .
A 1 7 GLU 7 7 GLU GLU A .
A 1 8 THR 8 8 THR THR A .
A 1 9 CYS 9 9 CYS CYS A .
A 1 10 PHE 10 10 PHE PHE A .
A 1 11 THR 11 11 THR THR A .
A 1 12 GLY 12 12 GLY GLY A .
A 1 13 THR 13 13 THR THR A .
A 1 14 CYS 14 14 CYS CYS A .
A 1 15 TYR 15 15 TYR TYR A .
A 1 16 THR 16 16 THR THR A .
A 1 17 ASN 17 17 ASN ASN A .
A 1 18 GLY 18 18 GLY GLY A .
A 1 19 CYS 19 19 CYS CYS A .
A 1 20 THR 20 20 THR THR A .
A 1 21 CYS 21 21 CYS CYS A .
A 1 22 ASP 22 22 ASP ASP A .
A 1 23 PRO 23 23 PRO PRO A .
A 1 24 TRP 24 24 TRP TRP A .
A 1 25 PRO 25 25 PRO PRO A .
A 1 26 VAL 26 26 VAL VAL A .
A 1 27 CYS 27 27 CYS CYS A .
A 1 28 THR 28 28 THR THR A .
A 1 29 ARG 29 29 ARG ARG A .
A 1 30 ASN 30 30 ASN ASN A .
#
#
loop_
_ma_data.id
_ma_data.name
_ma_data.content_type
_ma_data.content_type_other_details
1 'Kalata-B1 {PDB ID=4ttn, label_asym_id=A, auth_asym_id=A, SMTL ID=4ttn.1.A}'
'template structure' .
2 . target .
3 'Target-template alignment by HHblits to 4ttn, label_asym_id=A'
'target-template alignment' .
4 'model 1' 'model coordinates' .
5 SMTL 'reference database' .
6 PDB 'reference database' .
7 'Template search output' other 'Results of the sequence search'
#
#
loop_
_ma_data_group.ordinal_id
_ma_data_group.group_id
_ma_data_group.data_id
1 1 2
2 1 5
3 1 6
4 2 7
5 3 2
6 3 1
7 3 3
8 4 1
9 4 3
10 5 4
#
#
loop_
_ma_data_ref_db.data_id
_ma_data_ref_db.name
_ma_data_ref_db.location_url
_ma_data_ref_db.version
_ma_data_ref_db.release_date
5 SMTL https://swissmodel.expasy.org/templates/ . 2025-07-02
6 PDB https://www.wwpdb.org . 2025-06-27
#
#
loop_
_ma_target_entity.entity_id
_ma_target_entity.data_id
_ma_target_entity.origin
1 2 'reference database'
#
#
loop_
_ma_target_entity_instance.asym_id
_ma_target_entity_instance.entity_id
_ma_target_entity_instance.details
A 1 .
#
#
loop_
_ma_template_trans_matrix.id
_ma_template_trans_matrix.rot_matrix[1][1]
_ma_template_trans_matrix.rot_matrix[2][1]
_ma_template_trans_matrix.rot_matrix[3][1]
_ma_template_trans_matrix.rot_matrix[1][2]
_ma_template_trans_matrix.rot_matrix[2][2]
_ma_template_trans_matrix.rot_matrix[3][2]
_ma_template_trans_matrix.rot_matrix[1][3]
_ma_template_trans_matrix.rot_matrix[2][3]
_ma_template_trans_matrix.rot_matrix[3][3]
_ma_template_trans_matrix.tr_vector[1]
_ma_template_trans_matrix.tr_vector[2]
_ma_template_trans_matrix.tr_vector[3]
1 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000
1.000000 0 0 0
#
#
loop_
_ma_template_details.ordinal_id
_ma_template_details.template_id
_ma_template_details.template_origin
_ma_template_details.template_entity_type
_ma_template_details.template_trans_matrix_id
_ma_template_details.template_data_id
_ma_template_details.target_asym_id
_ma_template_details.template_label_asym_id
_ma_template_details.template_label_entity_id
_ma_template_details.template_model_num
_ma_template_details.template_auth_asym_id
1 1 'reference database' polymer 1 1 A A 1 1 A
#
#
loop_
_ma_template_poly.template_id
_ma_template_poly.seq_one_letter_code
_ma_template_poly.seq_one_letter_code_can
1 GLPVCAETCVGGTCNTPGCTCSWPVCTRN GLPVCAETCVGGTCNTPGCTCSWPVCTRN
#
#
loop_
_ma_template_poly_segment.id
_ma_template_poly_segment.template_id
_ma_template_poly_segment.residue_number_begin
_ma_template_poly_segment.residue_number_end
1 1 1 29
#
#
loop_
_ma_template_ref_db_details.template_id
_ma_template_ref_db_details.db_name
_ma_template_ref_db_details.db_name_other_details
_ma_template_ref_db_details.db_accession_code
_ma_template_ref_db_details.db_version_date
1 PDB . 4ttn 2024-10-30
#
#
loop_
_ma_target_template_poly_mapping.id
_ma_target_template_poly_mapping.template_segment_id
_ma_target_template_poly_mapping.target_asym_id
_ma_target_template_poly_mapping.target_seq_id_begin
_ma_target_template_poly_mapping.target_seq_id_end
1 1 A 1 30
#
#
loop_
_ma_alignment_info.alignment_id
_ma_alignment_info.data_id
_ma_alignment_info.software_group_id
_ma_alignment_info.alignment_length
_ma_alignment_info.alignment_type
_ma_alignment_info.alignment_mode
1 3 1 30 'target-template pairwise alignment' local
#
#
loop_
_ma_alignment_details.ordinal_id
_ma_alignment_details.alignment_id
_ma_alignment_details.template_segment_id
_ma_alignment_details.target_asym_id
_ma_alignment_details.score_type
_ma_alignment_details.score_type_other_details
_ma_alignment_details.score_value
_ma_alignment_details.percent_sequence_identity
_ma_alignment_details.sequence_identity_denominator
_ma_alignment_details.sequence_identity_denominator_other_details
1 1 1 A 'HHblits e-value' . 4.4e-17 79.310
'Number of aligned residue pairs (not including the gaps)' .
#
#
loop_
_ma_alignment.ordinal_id
_ma_alignment.alignment_id
_ma_alignment.target_template_flag
_ma_alignment.sequence
1 1 1 GLPVCGETCFTGTCYTNGCTCDPWPVCTRN
2 1 2 GLPVCAETCVGGTCNTPGCTCS-WPVCTRN
#
#
loop_
_ma_protocol_step.ordinal_id
_ma_protocol_step.protocol_id
_ma_protocol_step.step_id
_ma_protocol_step.method_type
_ma_protocol_step.step_name
_ma_protocol_step.details
_ma_protocol_step.software_group_id
_ma_protocol_step.input_data_group_id
_ma_protocol_step.output_data_group_id
1 1 1 'template search' 'template search' 'SWISS-MODEL template search in PDB' 2
1 2
2 1 2 'template selection' 'template selection'
'Automatic template selection by SWISS-MODEL' 3 2 4
3 1 3 modeling 'homology modeling'
'SWISS-MODEL auto-model mode using ProMod3 on 4ttn.1' 4 3 5
#
#
loop_
_ma_model_list.ordinal_id
_ma_model_list.model_name
_ma_model_list.data_id
_ma_model_list.model_type
_ma_model_list.model_type_other_details
1 'model 1' 4 'Homology model' .
#
#
loop_
_ma_model_group.id
_ma_model_group.name
_ma_model_group.details
1 . .
#
#
loop_
_ma_model_group_link.group_id
_ma_model_group_link.model_id
1 1
#
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_alt_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.auth_seq_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.label_entity_id
_atom_site.auth_asym_id
_atom_site.auth_comp_id
_atom_site.B_iso_or_equiv
_atom_site.pdbx_PDB_model_num
ATOM 1 N N . GLY 1 1 ? A 8.794 25.255 76.336 1 1 A GLY 0.400 1
ATOM 2 C CA . GLY 1 1 ? A 8.809 25.086 74.838 1 1 A GLY 0.400 1
ATOM 3 C C . GLY 1 1 ? A 9.423 23.835 74.263 1 1 A GLY 0.400 1
ATOM 4 O O . GLY 1 1 ? A 9.138 23.492 73.125 1 1 A GLY 0.400 1
ATOM 5 N N . LEU 2 2 ? A 10.287 23.111 75.008 1 1 A LEU 0.370 1
ATOM 6 C CA . LEU 2 2 ? A 10.920 21.900 74.510 1 1 A LEU 0.370 1
ATOM 7 C C . LEU 2 2 ? A 10.141 20.629 74.854 1 1 A LEU 0.370 1
ATOM 8 O O . LEU 2 2 ? A 9.870 20.405 76.036 1 1 A LEU 0.370 1
ATOM 9 C CB . LEU 2 2 ? A 12.377 21.695 74.996 1 1 A LEU 0.370 1
ATOM 10 C CG . LEU 2 2 ? A 13.400 22.625 74.320 1 1 A LEU 0.370 1
ATOM 11 C CD1 . LEU 2 2 ? A 14.724 22.657 75.102 1 1 A LEU 0.370 1
ATOM 12 C CD2 . LEU 2 2 ? A 13.658 22.230 72.852 1 1 A LEU 0.370 1
ATOM 13 N N . PRO 3 3 ? A 9.776 19.744 73.928 1 1 A PRO 0.640 1
ATOM 14 C CA . PRO 3 3 ? A 8.916 18.597 74.195 1 1 A PRO 0.640 1
ATOM 15 C C . PRO 3 3 ? A 9.768 17.428 74.657 1 1 A PRO 0.640 1
ATOM 16 O O . PRO 3 3 ? A 9.884 16.413 73.976 1 1 A PRO 0.640 1
ATOM 17 C CB . PRO 3 3 ? A 8.279 18.330 72.818 1 1 A PRO 0.640 1
ATOM 18 C CG . PRO 3 3 ? A 9.344 18.756 71.805 1 1 A PRO 0.640 1
ATOM 19 C CD . PRO 3 3 ? A 10.033 19.916 72.505 1 1 A PRO 0.640 1
ATOM 20 N N . VAL 4 4 ? A 10.389 17.560 75.838 1 1 A VAL 0.720 1
ATOM 21 C CA . VAL 4 4 ? A 11.407 16.654 76.337 1 1 A VAL 0.720 1
ATOM 22 C C . VAL 4 4 ? A 10.968 16.048 77.650 1 1 A VAL 0.720 1
ATOM 23 O O . VAL 4 4 ? A 11.764 15.601 78.473 1 1 A VAL 0.720 1
ATOM 24 C CB . VAL 4 4 ? A 12.754 17.352 76.487 1 1 A VAL 0.720 1
ATOM 25 C CG1 . VAL 4 4 ? A 13.256 17.755 75.084 1 1 A VAL 0.720 1
ATOM 26 C CG2 . VAL 4 4 ? A 12.672 18.570 77.433 1 1 A VAL 0.720 1
ATOM 27 N N . CYS 5 5 ? A 9.646 16.025 77.890 1 1 A CYS 0.750 1
ATOM 28 C CA . CYS 5 5 ? A 9.104 15.536 79.141 1 1 A CYS 0.750 1
ATOM 29 C C . CYS 5 5 ? A 8.652 14.101 79.074 1 1 A CYS 0.750 1
ATOM 30 O O . CYS 5 5 ? A 8.322 13.525 80.105 1 1 A CYS 0.750 1
ATOM 31 C CB . CYS 5 5 ? A 7.902 16.397 79.570 1 1 A CYS 0.750 1
ATOM 32 S SG . CYS 5 5 ? A 8.422 18.115 79.819 1 1 A CYS 0.750 1
ATOM 33 N N . GLY 6 6 ? A 8.631 13.491 77.861 1 1 A GLY 0.680 1
ATOM 34 C CA . GLY 6 6 ? A 8.087 12.149 77.645 1 1 A GLY 0.680 1
ATOM 35 C C . GLY 6 6 ? A 6.665 11.984 78.095 1 1 A GLY 0.680 1
ATOM 36 O O . GLY 6 6 ? A 6.293 10.949 78.635 1 1 A GLY 0.680 1
ATOM 37 N N . GLU 7 7 ? A 5.858 13.038 77.896 1 1 A GLU 0.700 1
ATOM 38 C CA . GLU 7 7 ? A 4.535 13.120 78.451 1 1 A GLU 0.700 1
ATOM 39 C C . GLU 7 7 ? A 3.657 13.944 77.531 1 1 A GLU 0.700 1
ATOM 40 O O . GLU 7 7 ? A 4.074 14.968 76.985 1 1 A GLU 0.700 1
ATOM 41 C CB . GLU 7 7 ? A 4.577 13.734 79.874 1 1 A GLU 0.700 1
ATOM 42 C CG . GLU 7 7 ? A 3.235 13.648 80.637 1 1 A GLU 0.700 1
ATOM 43 C CD . GLU 7 7 ? A 3.198 14.381 81.976 1 1 A GLU 0.700 1
ATOM 44 O OE1 . GLU 7 7 ? A 2.209 14.163 82.721 1 1 A GLU 0.700 1
ATOM 45 O OE2 . GLU 7 7 ? A 4.109 15.198 82.277 1 1 A GLU 0.700 1
ATOM 46 N N . THR 8 8 ? A 2.407 13.502 77.324 1 1 A THR 0.690 1
ATOM 47 C CA . THR 8 8 ? A 1.361 14.275 76.683 1 1 A THR 0.690 1
ATOM 48 C C . THR 8 8 ? A 0.383 14.726 77.738 1 1 A THR 0.690 1
ATOM 49 O O . THR 8 8 ? A 0.295 14.162 78.822 1 1 A THR 0.690 1
ATOM 50 C CB . THR 8 8 ? A 0.593 13.515 75.608 1 1 A THR 0.690 1
ATOM 51 O OG1 . THR 8 8 ? A 0.068 12.287 76.094 1 1 A THR 0.690 1
ATOM 52 C CG2 . THR 8 8 ? A 1.555 13.167 74.466 1 1 A THR 0.690 1
ATOM 53 N N . CYS 9 9 ? A -0.398 15.769 77.435 1 1 A CYS 0.660 1
ATOM 54 C CA . CYS 9 9 ? A -1.333 16.353 78.368 1 1 A CYS 0.660 1
ATOM 55 C C . CYS 9 9 ? A -2.618 16.675 77.647 1 1 A CYS 0.660 1
ATOM 56 O O . CYS 9 9 ? A -3.074 17.814 77.618 1 1 A CYS 0.660 1
ATOM 57 C CB . CYS 9 9 ? A -0.781 17.641 79.022 1 1 A CYS 0.660 1
ATOM 58 S SG . CYS 9 9 ? A -0.118 18.862 77.845 1 1 A CYS 0.660 1
ATOM 59 N N . PHE 10 10 ? A -3.282 15.654 77.065 1 1 A PHE 0.580 1
ATOM 60 C CA . PHE 10 10 ? A -4.570 15.806 76.394 1 1 A PHE 0.580 1
ATOM 61 C C . PHE 10 10 ? A -5.637 16.428 77.295 1 1 A PHE 0.580 1
ATOM 62 O O . PHE 10 10 ? A -6.437 17.254 76.872 1 1 A PHE 0.580 1
ATOM 63 C CB . PHE 10 10 ? A -5.034 14.424 75.858 1 1 A PHE 0.580 1
ATOM 64 C CG . PHE 10 10 ? A -6.345 14.499 75.121 1 1 A PHE 0.580 1
ATOM 65 C CD1 . PHE 10 10 ? A -7.546 14.169 75.763 1 1 A PHE 0.580 1
ATOM 66 C CD2 . PHE 10 10 ? A -6.401 14.963 73.803 1 1 A PHE 0.580 1
ATOM 67 C CE1 . PHE 10 10 ? A -8.771 14.286 75.103 1 1 A PHE 0.580 1
ATOM 68 C CE2 . PHE 10 10 ? A -7.622 15.076 73.133 1 1 A PHE 0.580 1
ATOM 69 C CZ . PHE 10 10 ? A -8.808 14.730 73.781 1 1 A PHE 0.580 1
ATOM 70 N N . THR 11 11 ? A -5.614 16.066 78.586 1 1 A THR 0.610 1
ATOM 71 C CA . THR 11 11 ? A -6.523 16.546 79.609 1 1 A THR 0.610 1
ATOM 72 C C . THR 11 11 ? A -6.170 17.929 80.137 1 1 A THR 0.610 1
ATOM 73 O O . THR 11 11 ? A -6.925 18.498 80.922 1 1 A THR 0.610 1
ATOM 74 C CB . THR 11 11 ? A -6.566 15.579 80.784 1 1 A THR 0.610 1
ATOM 75 O OG1 . THR 11 11 ? A -5.267 15.325 81.303 1 1 A THR 0.610 1
ATOM 76 C CG2 . THR 11 11 ? A -7.097 14.223 80.296 1 1 A THR 0.610 1
ATOM 77 N N . GLY 12 12 ? A -5.018 18.509 79.723 1 1 A GLY 0.640 1
ATOM 78 C CA . GLY 12 12 ? A -4.620 19.867 80.075 1 1 A GLY 0.640 1
ATOM 79 C C . GLY 12 12 ? A -3.583 20.000 81.153 1 1 A GLY 0.640 1
ATOM 80 O O . GLY 12 12 ? A -3.123 21.103 81.435 1 1 A GLY 0.640 1
ATOM 81 N N . THR 13 13 ? A -3.161 18.885 81.768 1 1 A THR 0.710 1
ATOM 82 C CA . THR 13 13 ? A -2.254 18.908 82.911 1 1 A THR 0.710 1
ATOM 83 C C . THR 13 13 ? A -1.122 17.943 82.688 1 1 A THR 0.710 1
ATOM 84 O O . THR 13 13 ? A -1.350 16.830 82.224 1 1 A THR 0.710 1
ATOM 85 C CB . THR 13 13 ? A -2.941 18.547 84.219 1 1 A THR 0.710 1
ATOM 86 O OG1 . THR 13 13 ? A -3.957 19.496 84.492 1 1 A THR 0.710 1
ATOM 87 C CG2 . THR 13 13 ? A -1.996 18.603 85.427 1 1 A THR 0.710 1
ATOM 88 N N . CYS 14 14 ? A 0.121 18.360 83.015 1 1 A CYS 0.750 1
ATOM 89 C CA . CYS 14 14 ? A 1.310 17.524 83.022 1 1 A CYS 0.750 1
ATOM 90 C C . CYS 14 14 ? A 1.676 17.211 84.451 1 1 A CYS 0.750 1
ATOM 91 O O . CYS 14 14 ? A 1.506 18.058 85.328 1 1 A CYS 0.750 1
ATOM 92 C CB . CYS 14 14 ? A 2.527 18.241 82.398 1 1 A CYS 0.750 1
ATOM 93 S SG . CYS 14 14 ? A 2.178 18.718 80.698 1 1 A CYS 0.750 1
ATOM 94 N N . TYR 15 15 ? A 2.178 15.995 84.716 1 1 A TYR 0.720 1
ATOM 95 C CA . TYR 15 15 ? A 2.556 15.554 86.039 1 1 A TYR 0.720 1
ATOM 96 C C . TYR 15 15 ? A 4.062 15.476 86.211 1 1 A TYR 0.720 1
ATOM 97 O O . TYR 15 15 ? A 4.558 15.379 87.335 1 1 A TYR 0.720 1
ATOM 98 C CB . TYR 15 15 ? A 1.987 14.146 86.310 1 1 A TYR 0.720 1
ATOM 99 C CG . TYR 15 15 ? A 0.490 14.168 86.321 1 1 A TYR 0.720 1
ATOM 100 C CD1 . TYR 15 15 ? A -0.207 14.769 87.375 1 1 A TYR 0.720 1
ATOM 101 C CD2 . TYR 15 15 ? A -0.238 13.588 85.277 1 1 A TYR 0.720 1
ATOM 102 C CE1 . TYR 15 15 ? A -1.607 14.780 87.390 1 1 A TYR 0.720 1
ATOM 103 C CE2 . TYR 15 15 ? A -1.637 13.592 85.293 1 1 A TYR 0.720 1
ATOM 104 C CZ . TYR 15 15 ? A -2.322 14.189 86.352 1 1 A TYR 0.720 1
ATOM 105 O OH . TYR 15 15 ? A -3.728 14.195 86.375 1 1 A TYR 0.720 1
ATOM 106 N N . THR 16 16 ? A 4.853 15.554 85.120 1 1 A THR 0.750 1
ATOM 107 C CA . THR 16 16 ? A 6.310 15.606 85.229 1 1 A THR 0.750 1
ATOM 108 C C . THR 16 16 ? A 6.807 16.917 85.806 1 1 A THR 0.750 1
ATOM 109 O O . THR 16 16 ? A 6.474 18.006 85.342 1 1 A THR 0.750 1
ATOM 110 C CB . THR 16 16 ? A 7.052 15.335 83.926 1 1 A THR 0.750 1
ATOM 111 O OG1 . THR 16 16 ? A 6.780 14.023 83.470 1 1 A THR 0.750 1
ATOM 112 C CG2 . THR 16 16 ? A 8.581 15.329 84.078 1 1 A THR 0.750 1
ATOM 113 N N . ASN 17 17 ? A 7.662 16.845 86.853 1 1 A ASN 0.720 1
ATOM 114 C CA . ASN 17 17 ? A 8.266 17.995 87.505 1 1 A ASN 0.720 1
ATOM 115 C C . ASN 17 17 ? A 8.984 18.955 86.542 1 1 A ASN 0.720 1
ATOM 116 O O . ASN 17 17 ? A 9.853 18.566 85.755 1 1 A ASN 0.720 1
ATOM 117 C CB . ASN 17 17 ? A 9.231 17.508 88.621 1 1 A ASN 0.720 1
ATOM 118 C CG . ASN 17 17 ? A 9.755 18.647 89.490 1 1 A ASN 0.720 1
ATOM 119 O OD1 . ASN 17 17 ? A 10.649 19.388 89.085 1 1 A ASN 0.720 1
ATOM 120 N ND2 . ASN 17 17 ? A 9.200 18.803 90.711 1 1 A ASN 0.720 1
ATOM 121 N N . GLY 18 18 ? A 8.608 20.253 86.584 1 1 A GLY 0.810 1
ATOM 122 C CA . GLY 18 18 ? A 9.162 21.291 85.724 1 1 A GLY 0.810 1
ATOM 123 C C . GLY 18 18 ? A 8.569 21.342 84.343 1 1 A GLY 0.810 1
ATOM 124 O O . GLY 18 18 ? A 9.024 22.138 83.527 1 1 A GLY 0.810 1
ATOM 125 N N . CYS 19 19 ? A 7.564 20.495 84.042 1 1 A CYS 0.790 1
ATOM 126 C CA . CYS 19 19 ? A 6.892 20.486 82.761 1 1 A CYS 0.790 1
ATOM 127 C C . CYS 19 19 ? A 5.518 21.102 82.854 1 1 A CYS 0.790 1
ATOM 128 O O . CYS 19 19 ? A 4.835 21.021 83.872 1 1 A CYS 0.790 1
ATOM 129 C CB . CYS 19 19 ? A 6.764 19.069 82.159 1 1 A CYS 0.790 1
ATOM 130 S SG . CYS 19 19 ? A 8.399 18.352 81.828 1 1 A CYS 0.790 1
ATOM 131 N N . THR 20 20 ? A 5.081 21.753 81.770 1 1 A THR 0.760 1
ATOM 132 C CA . THR 20 20 ? A 3.808 22.441 81.696 1 1 A THR 0.760 1
ATOM 133 C C . THR 20 20 ? A 3.155 22.008 80.411 1 1 A THR 0.760 1
ATOM 134 O O . THR 20 20 ? A 3.796 21.389 79.565 1 1 A THR 0.760 1
ATOM 135 C CB . THR 20 20 ? A 3.942 23.965 81.765 1 1 A THR 0.760 1
ATOM 136 O OG1 . THR 20 20 ? A 4.937 24.458 80.884 1 1 A THR 0.760 1
ATOM 137 C CG2 . THR 20 20 ? A 4.436 24.366 83.160 1 1 A THR 0.760 1
ATOM 138 N N . CYS 21 21 ? A 1.832 22.229 80.269 1 1 A CYS 0.730 1
ATOM 139 C CA . CYS 21 21 ? A 1.082 21.755 79.122 1 1 A CYS 0.730 1
ATOM 140 C C . CYS 21 21 ? A 1.003 22.845 78.078 1 1 A CYS 0.730 1
ATOM 141 O O . CYS 21 21 ? A 0.561 23.949 78.387 1 1 A CYS 0.730 1
ATOM 142 C CB . CYS 21 21 ? A -0.359 21.328 79.512 1 1 A CYS 0.730 1
ATOM 143 S SG . CYS 21 21 ? A -1.253 20.504 78.164 1 1 A CYS 0.730 1
ATOM 144 N N . ASP 22 22 ? A 1.409 22.539 76.831 1 1 A ASP 0.650 1
ATOM 145 C CA . ASP 22 22 ? A 1.567 23.507 75.779 1 1 A ASP 0.650 1
ATOM 146 C C . ASP 22 22 ? A 1.038 22.924 74.483 1 1 A ASP 0.650 1
ATOM 147 O O . ASP 22 22 ? A 0.692 21.737 74.438 1 1 A ASP 0.650 1
ATOM 148 C CB . ASP 22 22 ? A 3.069 23.845 75.642 1 1 A ASP 0.650 1
ATOM 149 C CG . ASP 22 22 ? A 3.384 25.065 76.470 1 1 A ASP 0.650 1
ATOM 150 O OD1 . ASP 22 22 ? A 2.862 26.141 76.085 1 1 A ASP 0.650 1
ATOM 151 O OD2 . ASP 22 22 ? A 4.216 24.961 77.403 1 1 A ASP 0.650 1
ATOM 152 N N . PRO 23 23 ? A 0.887 23.678 73.396 1 1 A PRO 0.500 1
ATOM 153 C CA . PRO 23 23 ? A 0.455 23.099 72.150 1 1 A PRO 0.500 1
ATOM 154 C C . PRO 23 23 ? A 1.359 22.010 71.590 1 1 A PRO 0.500 1
ATOM 155 O O . PRO 23 23 ? A 2.575 22.127 71.693 1 1 A PRO 0.500 1
ATOM 156 C CB . PRO 23 23 ? A 0.324 24.252 71.160 1 1 A PRO 0.500 1
ATOM 157 C CG . PRO 23 23 ? A 0.160 25.504 72.024 1 1 A PRO 0.500 1
ATOM 158 C CD . PRO 23 23 ? A 0.771 25.135 73.387 1 1 A PRO 0.500 1
ATOM 159 N N . TRP 24 24 ? A 0.840 20.940 70.975 1 1 A TRP 0.380 1
ATOM 160 C CA . TRP 24 24 ? A -0.559 20.589 70.897 1 1 A TRP 0.380 1
ATOM 161 C C . TRP 24 24 ? A -0.762 19.306 71.645 1 1 A TRP 0.380 1
ATOM 162 O O . TRP 24 24 ? A -0.265 18.268 71.259 1 1 A TRP 0.380 1
ATOM 163 C CB . TRP 24 24 ? A -1.092 20.387 69.462 1 1 A TRP 0.380 1
ATOM 164 C CG . TRP 24 24 ? A -0.994 21.599 68.586 1 1 A TRP 0.380 1
ATOM 165 C CD1 . TRP 24 24 ? A 0.038 21.905 67.756 1 1 A TRP 0.380 1
ATOM 166 C CD2 . TRP 24 24 ? A -1.974 22.646 68.438 1 1 A TRP 0.380 1
ATOM 167 N NE1 . TRP 24 24 ? A -0.228 23.065 67.078 1 1 A TRP 0.380 1
ATOM 168 C CE2 . TRP 24 24 ? A -1.459 23.534 67.478 1 1 A TRP 0.380 1
ATOM 169 C CE3 . TRP 24 24 ? A -3.219 22.871 69.030 1 1 A TRP 0.380 1
ATOM 170 C CZ2 . TRP 24 24 ? A -2.180 24.648 67.090 1 1 A TRP 0.380 1
ATOM 171 C CZ3 . TRP 24 24 ? A -3.946 24.005 68.633 1 1 A TRP 0.380 1
ATOM 172 C CH2 . TRP 24 24 ? A -3.432 24.883 67.674 1 1 A TRP 0.380 1
ATOM 173 N N . PRO 25 25 ? A -1.598 19.406 72.646 1 1 A PRO 0.620 1
ATOM 174 C CA . PRO 25 25 ? A -1.538 18.581 73.861 1 1 A PRO 0.620 1
ATOM 175 C C . PRO 25 25 ? A -0.193 17.988 74.360 1 1 A PRO 0.620 1
ATOM 176 O O . PRO 25 25 ? A -0.208 16.841 74.801 1 1 A PRO 0.620 1
ATOM 177 C CB . PRO 25 25 ? A -2.457 17.431 73.499 1 1 A PRO 0.620 1
ATOM 178 C CG . PRO 25 25 ? A -3.564 18.026 72.607 1 1 A PRO 0.620 1
ATOM 179 C CD . PRO 25 25 ? A -3.009 19.365 72.140 1 1 A PRO 0.620 1
ATOM 180 N N . VAL 26 26 ? A 0.924 18.733 74.408 1 1 A VAL 0.720 1
ATOM 181 C CA . VAL 26 26 ? A 2.247 18.140 74.657 1 1 A VAL 0.720 1
ATOM 182 C C . VAL 26 26 ? A 2.855 18.819 75.854 1 1 A VAL 0.720 1
ATOM 183 O O . VAL 26 26 ? A 2.833 20.039 75.981 1 1 A VAL 0.720 1
ATOM 184 C CB . VAL 26 26 ? A 3.214 18.276 73.471 1 1 A VAL 0.720 1
ATOM 185 C CG1 . VAL 26 26 ? A 4.610 17.702 73.745 1 1 A VAL 0.720 1
ATOM 186 C CG2 . VAL 26 26 ? A 2.667 17.501 72.272 1 1 A VAL 0.720 1
ATOM 187 N N . CYS 27 27 ? A 3.416 18.038 76.798 1 1 A CYS 0.760 1
ATOM 188 C CA . CYS 27 27 ? A 4.140 18.607 77.912 1 1 A CYS 0.760 1
ATOM 189 C C . CYS 27 27 ? A 5.502 19.112 77.501 1 1 A CYS 0.760 1
ATOM 190 O O . CYS 27 27 ? A 6.252 18.425 76.807 1 1 A CYS 0.760 1
ATOM 191 C CB . CYS 27 27 ? A 4.322 17.591 79.048 1 1 A CYS 0.760 1
ATOM 192 S SG . CYS 27 27 ? A 2.711 17.077 79.665 1 1 A CYS 0.760 1
ATOM 193 N N . THR 28 28 ? A 5.869 20.326 77.933 1 1 A THR 0.750 1
ATOM 194 C CA . THR 28 28 ? A 7.136 20.927 77.569 1 1 A THR 0.750 1
ATOM 195 C C . THR 28 28 ? A 7.873 21.402 78.789 1 1 A THR 0.750 1
ATOM 196 O O . THR 28 28 ? A 7.288 21.649 79.834 1 1 A THR 0.750 1
ATOM 197 C CB . THR 28 28 ? A 7.024 22.102 76.592 1 1 A THR 0.750 1
ATOM 198 O OG1 . THR 28 28 ? A 6.470 23.293 77.149 1 1 A THR 0.750 1
ATOM 199 C CG2 . THR 28 28 ? A 6.290 21.658 75.313 1 1 A THR 0.750 1
ATOM 200 N N . ARG 29 29 ? A 9.209 21.528 78.670 1 1 A ARG 0.390 1
ATOM 201 C CA . ARG 29 29 ? A 10.035 22.078 79.713 1 1 A ARG 0.390 1
ATOM 202 C C . ARG 29 29 ? A 10.875 23.226 79.149 1 1 A ARG 0.390 1
ATOM 203 O O . ARG 29 29 ? A 11.911 22.964 78.553 1 1 A ARG 0.390 1
ATOM 204 C CB . ARG 29 29 ? A 11.014 20.997 80.211 1 1 A ARG 0.390 1
ATOM 205 C CG . ARG 29 29 ? A 11.866 21.481 81.393 1 1 A ARG 0.390 1
ATOM 206 C CD . ARG 29 29 ? A 13.080 20.612 81.706 1 1 A ARG 0.390 1
ATOM 207 N NE . ARG 29 29 ? A 12.619 19.206 81.922 1 1 A ARG 0.390 1
ATOM 208 C CZ . ARG 29 29 ? A 12.005 18.780 83.032 1 1 A ARG 0.390 1
ATOM 209 N NH1 . ARG 29 29 ? A 11.763 19.587 84.055 1 1 A ARG 0.390 1
ATOM 210 N NH2 . ARG 29 29 ? A 11.588 17.522 83.122 1 1 A ARG 0.390 1
ATOM 211 N N . ASN 30 30 ? A 10.498 24.497 79.381 1 1 A ASN 0.400 1
ATOM 212 C CA . ASN 30 30 ? A 11.178 25.697 78.834 1 1 A ASN 0.400 1
ATOM 213 C C . ASN 30 30 ? A 11.332 25.893 77.311 1 1 A ASN 0.400 1
ATOM 214 O O . ASN 30 30 ? A 11.662 24.962 76.567 1 1 A ASN 0.400 1
ATOM 215 C CB . ASN 30 30 ? A 12.623 25.951 79.244 1 1 A ASN 0.400 1
ATOM 216 C CG . ASN 30 30 ? A 12.757 25.928 80.731 1 1 A ASN 0.400 1
ATOM 217 O OD1 . ASN 30 30 ? A 12.026 26.531 81.517 1 1 A ASN 0.400 1
ATOM 218 N ND2 . ASN 30 30 ? A 13.811 25.188 81.128 1 1 A ASN 0.400 1
ATOM 219 O OXT . ASN 30 30 ? A 10.929 27.026 76.891 1 1 A ASN 0.400 1
#
#
loop_
_atom_type.symbol
C
N
O
S
#
#
loop_
_ma_qa_metric.id
_ma_qa_metric.name
_ma_qa_metric.description
_ma_qa_metric.type
_ma_qa_metric.mode
_ma_qa_metric.type_other_details
_ma_qa_metric.software_group_id
1 QMEANDisCo 'Predicted accuracy according to all-atom lDDT in [0,1].'
'pLDDT all-atom in [0,1]' local . 5
2 QMEANDisCo 'Predicted accuracy according to all-atom lDDT in [0,1].'
'pLDDT all-atom in [0,1]' global . 5
3 GMQE
'Global Model Quality Estimate of the model accuracy, calculated by SWISS-MODEL.'
'normalized score' global . 6
#
#
loop_
_ma_qa_metric_global.ordinal_id
_ma_qa_metric_global.model_id
_ma_qa_metric_global.metric_id
_ma_qa_metric_global.metric_value
1 1 2 0.645
2 1 3 0.680
#
#
loop_
_ma_qa_metric_local.ordinal_id
_ma_qa_metric_local.model_id
_ma_qa_metric_local.label_asym_id
_ma_qa_metric_local.label_seq_id
_ma_qa_metric_local.label_comp_id
_ma_qa_metric_local.metric_id
_ma_qa_metric_local.metric_value
1 1 A 1 GLY 1 0.400
2 1 A 2 LEU 1 0.370
3 1 A 3 PRO 1 0.640
4 1 A 4 VAL 1 0.720
5 1 A 5 CYS 1 0.750
6 1 A 6 GLY 1 0.680
7 1 A 7 GLU 1 0.700
8 1 A 8 THR 1 0.690
9 1 A 9 CYS 1 0.660
10 1 A 10 PHE 1 0.580
11 1 A 11 THR 1 0.610
12 1 A 12 GLY 1 0.640
13 1 A 13 THR 1 0.710
14 1 A 14 CYS 1 0.750
15 1 A 15 TYR 1 0.720
16 1 A 16 THR 1 0.750
17 1 A 17 ASN 1 0.720
18 1 A 18 GLY 1 0.810
19 1 A 19 CYS 1 0.790
20 1 A 20 THR 1 0.760
21 1 A 21 CYS 1 0.730
22 1 A 22 ASP 1 0.650
23 1 A 23 PRO 1 0.500
24 1 A 24 TRP 1 0.380
25 1 A 25 PRO 1 0.620
26 1 A 26 VAL 1 0.720
27 1 A 27 CYS 1 0.760
28 1 A 28 THR 1 0.750
29 1 A 29 ARG 1 0.390
30 1 A 30 ASN 1 0.400
#
#
loop_
_pdbx_data_usage.id
_pdbx_data_usage.type
_pdbx_data_usage.details
_pdbx_data_usage.url
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