data_SMR-b859bb521ad3a1d21a7edf867e192324_1
_entry.id SMR-b859bb521ad3a1d21a7edf867e192324_1
_struct.entry_id SMR-b859bb521ad3a1d21a7edf867e192324_1
_struct.pdbx_model_details
;This model was generated unsupervised by the SWISS-MODEL homology-modelling pipeline for the SWISS-MODEL Repository, a database of annotated 3D protein structure models. The modelled monomer covers following UniProtKB entries:

  - P86847/ CYCG_CLITE, Cyclotide cter-G

Estimated model accuracy of this model is 0.757, calculated by SWISS-MODEL as Global Model Quality Estimate (GMQE).
;
_struct.pdbx_structure_determination_methodology computational
_struct.title 'Model for UniProtKB entries P86847'
_audit_conform.dict_location https://raw.githubusercontent.com/ihmwg/ModelCIF/80e1e22/dist/mmcif_ma.dic
_audit_conform.dict_name mmcif_ma.dic
_audit_conform.dict_version 1.4.7
#
loop_
_citation.id
_citation.title
_citation.journal_abbrev
_citation.journal_volume
_citation.page_first
_citation.page_last
_citation.year
_citation.pdbx_database_id_PubMed
_citation.pdbx_database_id_DOI
primary 'The SWISS-MODEL Repository - new features and functionality'
'Nucleic Acids Res.' 45 D313 D319 2017 27899672 10.1093/nar/gkw1132
2 'SWISS-MODEL: homology modelling of protein structures and complexes'
'Nucleic Acids Res.' 46 W296 W303 2018 29788355 10.1093/nar/gky427
3 'ProMod3 - A versatile homology modelling toolbox' 'PLoS Comput. Biol.' 17(1)
1 18 2021 33507980 10.1371/journal.pcbi.1008667
4 'QMEANDisCo - distance constraints applied on model quality estimation'
Bioinformatics 36 1765 1771 2020 31697312 10.1093/bioinformatics/btz828
5
'OpenStructure: an integrated software framework for computational structural biology'
'Acta Crystallogr., Sect. D: Biol. Crystallogr.' 69 701 709 2013 23633579
10.1107/S0907444913007051
6 'BLAST+: architecture and applications' 'BMC Bioinf.' 10 421 . 2009 20003500
10.1186/1471-2105-10-421
7 'HH-suite3 for fast remote homology detection and deep protein annotation'
'BMC Bioinf.' 20 473 . 2019 31521110 10.1186/s12859-019-3019-7
#
#
loop_
_citation_author.citation_id
_citation_author.name
_citation_author.ordinal
primary 'Bienert, S.' 1
primary 'Waterhouse, A.' 2
primary 'de Beer, T.A.P.' 3
primary 'Tauriello, G.' 4
primary 'Studer, G.' 5
primary 'Bordoli, L.' 6
primary 'Schwede, T.' 7
2 'Waterhouse, A.' 8
2 'Bertoni, M.' 9
2 'Bienert, S.' 10
2 'Studer, G.' 11
2 'Tauriello, G.' 12
2 'Gumienny, R.' 13
2 'Heer, F.T.' 14
2 'de Beer, T.A.P.' 15
2 'Rempfer, C.' 16
2 'Bordoli, L.' 17
2 'Lepore, R.' 18
2 'Schwede, T.' 19
3 'Studer, G.' 20
3 'Tauriello, G.' 21
3 'Bienert, S.' 22
3 'Biasini, M.' 23
3 'Johner, N.' 24
3 'Schwede, T.' 25
4 'Studer, G.' 26
4 'Rempfer, C.' 27
4 'Waterhouse, A.M.' 28
4 'Gumienny, R.' 29
4 'Haas, J.' 30
4 'Schwede, T.' 31
5 'Biasini, M.' 32
5 'Schmidt, T.' 33
5 'Bienert, S.' 34
5 'Mariani, V.' 35
5 'Studer, G.' 36
5 'Haas, J.' 37
5 'Johner, N.' 38
5 'Schenk, A.D.' 39
5 'Philippsen, A.' 40
5 'Schwede, T.' 41
6 'Camacho, C.' 42
6 'Coulouris, G.' 43
6 'Avagyan, V.' 44
6 'Ma, N.' 45
6 'Papadopoulos, J.' 46
6 'Bealer, K.' 47
6 'Madden, T.L.' 48
7 'Steinegger, M.' 49
7 'Meier, M.' 50
7 'Mirdita, M.' 51
7 'Vohringer, H.' 52
7 'Haunsberger, S.J.' 53
7 'Soding, J.' 54
#
#
loop_
_software.pdbx_ordinal
_software.name
_software.classification
_software.description
_software.version
_software.type
_software.location
_software.citation_id
1 SWISS-MODEL 'model building' 'Homology modelling web service' 2025-06.3
package https://swissmodel.expasy.org 2
2 ProMod3 'model building' 'Modular homology modelling engine' 3.5.0 library
https://git.scicore.unibas.ch/schwede/ProMod3 3
3 QMEAN 'model building' 'QMEAN - Qualitative Model Energy ANalysis' 4.4.0
library https://git.scicore.unibas.ch/schwede/QMEAN 4
4 OpenStructure 'data processing'
'Open-Source Computational Structural Biology Framework' 2.10.0 package
https://openstructure.org/ 5
5 BLAST 'data collection' . 2.14.1 package https://blast.ncbi.nlm.nih.gov 6
6 HH-suite 'data collection' 'HH-suite3 for sensitive sequence searching' 3.2.0
package https://github.com/soedinglab/hh-suite 7
#
#
loop_
_ma_software_group.ordinal_id
_ma_software_group.group_id
_ma_software_group.software_id
_ma_software_group.parameter_group_id
1 1 6 .
2 2 1 .
3 2 4 .
4 2 5 .
5 2 6 .
6 3 1 .
7 3 4 .
8 4 1 .
9 4 2 .
10 4 4 .
11 5 3 .
12 6 1 .
13 6 3 .
14 6 4 .
#
#
loop_
_audit_author.name
_audit_author.pdbx_ordinal
'Bienert, S.' 1
'Waterhouse, A.' 2
'de Beer, T.A.P.' 3
'Tauriello, G.' 4
'Studer, G.' 5
'Bordoli, L.' 6
'Schwede, T.' 7
#
#
loop_
_chem_comp.id
_chem_comp.type
_chem_comp.name
_chem_comp.formula
_chem_comp.formula_weight
_chem_comp.ma_provenance
ALA 'L-peptide linking' ALANINE 'C3 H7 N O2' 89.094 'CCD Core'
ASN 'L-peptide linking' ASPARAGINE 'C4 H8 N2 O3' 132.119 'CCD Core'
CYS 'L-peptide linking' CYSTEINE 'C3 H7 N O2 S' 121.154 'CCD Core'
GLU 'L-peptide linking' 'GLUTAMIC ACID' 'C5 H9 N O4' 147.130 'CCD Core'
GLY 'peptide linking' GLYCINE 'C2 H5 N O2' 75.067 'CCD Core'
ILE 'L-peptide linking' ISOLEUCINE 'C6 H13 N O2' 131.175 'CCD Core'
LEU 'L-peptide linking' LEUCINE 'C6 H13 N O2' 131.175 'CCD Core'
LYS 'L-peptide linking' LYSINE 'C6 H15 N2 O2 1' 147.198 'CCD Core'
PHE 'L-peptide linking' PHENYLALANINE 'C9 H11 N O2' 165.192 'CCD Core'
PRO 'L-peptide linking' PROLINE 'C5 H9 N O2' 115.132 'CCD Core'
SER 'L-peptide linking' SERINE 'C3 H7 N O3' 105.093 'CCD Core'
THR 'L-peptide linking' THREONINE 'C4 H9 N O3' 119.120 'CCD Core'
TYR 'L-peptide linking' TYROSINE 'C9 H11 N O3' 181.191 'CCD Core'
VAL 'L-peptide linking' VALINE 'C5 H11 N O2' 117.148 'CCD Core'
#
#
loop_
_entity.id
_entity.type
_entity.src_method
_entity.pdbx_description
_entity.formula_weight
_entity.pdbx_number_of_molecules
_entity.details
1 polymer man . 3677.198 1 .
#
#
loop_
_struct_ref.id
_struct_ref.entity_id
_struct_ref.db_name
_struct_ref.db_code
_struct_ref.pdbx_db_accession
_struct_ref.pdbx_align_begin
_struct_ref.pdbx_seq_one_letter_code
_struct_ref.details
1 1 UNP CYCG_CLITE P86847 1 GLPCGESCVFIPCITTVVGCSCKNKVCYNN 'Cyclotide cter-G'
#
#
loop_
_struct_ref_seq.align_id
_struct_ref_seq.ref_id
_struct_ref_seq.seq_align_beg
_struct_ref_seq.seq_align_end
_struct_ref_seq.db_align_beg
_struct_ref_seq.db_align_end
1 1 1 30 1 30
#
#
loop_
_ma_target_ref_db_details.target_entity_id
_ma_target_ref_db_details.db_name
_ma_target_ref_db_details.db_name_other_details
_ma_target_ref_db_details.db_code
_ma_target_ref_db_details.db_accession
_ma_target_ref_db_details.seq_db_isoform
_ma_target_ref_db_details.seq_db_align_begin
_ma_target_ref_db_details.seq_db_align_end
_ma_target_ref_db_details.ncbi_taxonomy_id
_ma_target_ref_db_details.organism_scientific
_ma_target_ref_db_details.seq_db_sequence_version_date
_ma_target_ref_db_details.seq_db_sequence_checksum
_ma_target_ref_db_details.is_primary
1 UNP . CYCG_CLITE P86847 . 1 30 43366 'Clitoria ternatea (Butterfly pea)'
2011-03-08 B991DA52EB40E6C8 .
#
#
loop_
_entity_poly.entity_id
_entity_poly.type
_entity_poly.nstd_linkage
_entity_poly.nstd_monomer
_entity_poly.pdbx_strand_id
_entity_poly.pdbx_seq_one_letter_code
_entity_poly.pdbx_seq_one_letter_code_can
1 polypeptide(L) no no A GLPCGESCVFIPCITTVVGCSCKNKVCYNN
GLPCGESCVFIPCITTVVGCSCKNKVCYNN
#
#
loop_
_entity_poly_seq.entity_id
_entity_poly_seq.num
_entity_poly_seq.mon_id
_entity_poly_seq.hetero
1 1 GLY .
1 2 LEU .
1 3 PRO .
1 4 CYS .
1 5 GLY .
1 6 GLU .
1 7 SER .
1 8 CYS .
1 9 VAL .
1 10 PHE .
1 11 ILE .
1 12 PRO .
1 13 CYS .
1 14 ILE .
1 15 THR .
1 16 THR .
1 17 VAL .
1 18 VAL .
1 19 GLY .
1 20 CYS .
1 21 SER .
1 22 CYS .
1 23 LYS .
1 24 ASN .
1 25 LYS .
1 26 VAL .
1 27 CYS .
1 28 TYR .
1 29 ASN .
1 30 ASN .
#
#
loop_
_struct_asym.id
_struct_asym.entity_id
_struct_asym.details
A 1 .
#
#
loop_
_pdbx_poly_seq_scheme.asym_id
_pdbx_poly_seq_scheme.entity_id
_pdbx_poly_seq_scheme.seq_id
_pdbx_poly_seq_scheme.mon_id
_pdbx_poly_seq_scheme.pdb_seq_num
_pdbx_poly_seq_scheme.auth_seq_num
_pdbx_poly_seq_scheme.pdb_mon_id
_pdbx_poly_seq_scheme.auth_mon_id
_pdbx_poly_seq_scheme.pdb_strand_id
_pdbx_poly_seq_scheme.pdb_ins_code
A 1 1 GLY 1 1 GLY GLY A .
A 1 2 LEU 2 2 LEU LEU A .
A 1 3 PRO 3 3 PRO PRO A .
A 1 4 CYS 4 4 CYS CYS A .
A 1 5 GLY 5 5 GLY GLY A .
A 1 6 GLU 6 6 GLU GLU A .
A 1 7 SER 7 7 SER SER A .
A 1 8 CYS 8 8 CYS CYS A .
A 1 9 VAL 9 9 VAL VAL A .
A 1 10 PHE 10 10 PHE PHE A .
A 1 11 ILE 11 11 ILE ILE A .
A 1 12 PRO 12 12 PRO PRO A .
A 1 13 CYS 13 13 CYS CYS A .
A 1 14 ILE 14 14 ILE ILE A .
A 1 15 THR 15 15 THR THR A .
A 1 16 THR 16 16 THR THR A .
A 1 17 VAL 17 17 VAL VAL A .
A 1 18 VAL 18 18 VAL VAL A .
A 1 19 GLY 19 19 GLY GLY A .
A 1 20 CYS 20 20 CYS CYS A .
A 1 21 SER 21 21 SER SER A .
A 1 22 CYS 22 22 CYS CYS A .
A 1 23 LYS 23 23 LYS LYS A .
A 1 24 ASN 24 24 ASN ASN A .
A 1 25 LYS 25 25 LYS LYS A .
A 1 26 VAL 26 26 VAL VAL A .
A 1 27 CYS 27 27 CYS CYS A .
A 1 28 TYR 28 28 TYR TYR A .
A 1 29 ASN 29 29 ASN ASN A .
A 1 30 ASN 30 30 ASN ASN A .
#
#
loop_
_ma_data.id
_ma_data.name
_ma_data.content_type
_ma_data.content_type_other_details
1
'Cyclotide hyen-D {PDB ID=7rii, label_asym_id=A, auth_asym_id=A, SMTL ID=7rii.1.A}'
'template structure' .
2 . target .
3 'Target-template alignment by HHblits to 7rii, label_asym_id=A'
'target-template alignment' .
4 'model 1' 'model coordinates' .
5 SMTL 'reference database' .
6 PDB 'reference database' .
7 'Template search output' other 'Results of the sequence search'
#
#
loop_
_ma_data_group.ordinal_id
_ma_data_group.group_id
_ma_data_group.data_id
1 1 2
2 1 5
3 1 6
4 2 7
5 3 2
6 3 1
7 3 3
8 4 1
9 4 3
10 5 4
#
#
loop_
_ma_data_ref_db.data_id
_ma_data_ref_db.name
_ma_data_ref_db.location_url
_ma_data_ref_db.version
_ma_data_ref_db.release_date
5 SMTL https://swissmodel.expasy.org/templates/ . 2025-07-02
6 PDB https://www.wwpdb.org . 2025-06-27
#
#
loop_
_ma_target_entity.entity_id
_ma_target_entity.data_id
_ma_target_entity.origin
1 2 'reference database'
#
#
loop_
_ma_target_entity_instance.asym_id
_ma_target_entity_instance.entity_id
_ma_target_entity_instance.details
A 1 .
#
#
loop_
_ma_template_trans_matrix.id
_ma_template_trans_matrix.rot_matrix[1][1]
_ma_template_trans_matrix.rot_matrix[2][1]
_ma_template_trans_matrix.rot_matrix[3][1]
_ma_template_trans_matrix.rot_matrix[1][2]
_ma_template_trans_matrix.rot_matrix[2][2]
_ma_template_trans_matrix.rot_matrix[3][2]
_ma_template_trans_matrix.rot_matrix[1][3]
_ma_template_trans_matrix.rot_matrix[2][3]
_ma_template_trans_matrix.rot_matrix[3][3]
_ma_template_trans_matrix.tr_vector[1]
_ma_template_trans_matrix.tr_vector[2]
_ma_template_trans_matrix.tr_vector[3]
1 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000
1.000000 0 0 0
#
#
loop_
_ma_template_details.ordinal_id
_ma_template_details.template_id
_ma_template_details.template_origin
_ma_template_details.template_entity_type
_ma_template_details.template_trans_matrix_id
_ma_template_details.template_data_id
_ma_template_details.target_asym_id
_ma_template_details.template_label_asym_id
_ma_template_details.template_label_entity_id
_ma_template_details.template_model_num
_ma_template_details.template_auth_asym_id
1 1 'reference database' polymer 1 1 A A 1 1 A
#
#
loop_
_ma_template_poly.template_id
_ma_template_poly.seq_one_letter_code
_ma_template_poly.seq_one_letter_code_can
1 GFPCGESCVYLPCFTAAIGCSCKSKVCYKN GFPCGESCVYLPCFTAAIGCSCKSKVCYKN
#
#
loop_
_ma_template_poly_segment.id
_ma_template_poly_segment.template_id
_ma_template_poly_segment.residue_number_begin
_ma_template_poly_segment.residue_number_end
1 1 1 30
#
#
loop_
_ma_template_ref_db_details.template_id
_ma_template_ref_db_details.db_name
_ma_template_ref_db_details.db_name_other_details
_ma_template_ref_db_details.db_accession_code
_ma_template_ref_db_details.db_version_date
1 PDB . 7rii 2024-10-23
#
#
loop_
_ma_target_template_poly_mapping.id
_ma_target_template_poly_mapping.template_segment_id
_ma_target_template_poly_mapping.target_asym_id
_ma_target_template_poly_mapping.target_seq_id_begin
_ma_target_template_poly_mapping.target_seq_id_end
1 1 A 1 30
#
#
loop_
_ma_alignment_info.alignment_id
_ma_alignment_info.data_id
_ma_alignment_info.software_group_id
_ma_alignment_info.alignment_length
_ma_alignment_info.alignment_type
_ma_alignment_info.alignment_mode
1 3 1 30 'target-template pairwise alignment' local
#
#
loop_
_ma_alignment_details.ordinal_id
_ma_alignment_details.alignment_id
_ma_alignment_details.template_segment_id
_ma_alignment_details.target_asym_id
_ma_alignment_details.score_type
_ma_alignment_details.score_type_other_details
_ma_alignment_details.score_value
_ma_alignment_details.percent_sequence_identity
_ma_alignment_details.sequence_identity_denominator
_ma_alignment_details.sequence_identity_denominator_other_details
1 1 1 A 'HHblits e-value' . 1.8e-19 70.000
'Number of aligned residue pairs (not including the gaps)' .
#
#
loop_
_ma_alignment.ordinal_id
_ma_alignment.alignment_id
_ma_alignment.target_template_flag
_ma_alignment.sequence
1 1 1 GLPCGESCVFIPCITTVVGCSCKNKVCYNN
2 1 2 GFPCGESCVYLPCFTAAIGCSCKSKVCYKN
#
#
loop_
_ma_protocol_step.ordinal_id
_ma_protocol_step.protocol_id
_ma_protocol_step.step_id
_ma_protocol_step.method_type
_ma_protocol_step.step_name
_ma_protocol_step.details
_ma_protocol_step.software_group_id
_ma_protocol_step.input_data_group_id
_ma_protocol_step.output_data_group_id
1 1 1 'template search' 'template search' 'SWISS-MODEL template search in PDB' 2
1 2
2 1 2 'template selection' 'template selection'
'Automatic template selection by SWISS-MODEL' 3 2 4
3 1 3 modeling 'homology modeling'
'SWISS-MODEL auto-model mode using ProMod3 on 7rii.1' 4 3 5
#
#
loop_
_ma_model_list.ordinal_id
_ma_model_list.model_name
_ma_model_list.data_id
_ma_model_list.model_type
_ma_model_list.model_type_other_details
1 'model 1' 4 'Homology model' .
#
#
loop_
_ma_model_group.id
_ma_model_group.name
_ma_model_group.details
1 . .
#
#
loop_
_ma_model_group_link.group_id
_ma_model_group_link.model_id
1 1
#
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_alt_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.auth_seq_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.label_entity_id
_atom_site.auth_asym_id
_atom_site.auth_comp_id
_atom_site.B_iso_or_equiv
_atom_site.pdbx_PDB_model_num
ATOM 1 N N . GLY 1 1 ? A 7.327 11.341 0.246 1 1 A GLY 0.510 1
ATOM 2 C CA . GLY 1 1 ? A 8.527 12.213 0.439 1 1 A GLY 0.510 1
ATOM 3 C C . GLY 1 1 ? A 8.862 12.513 1.864 1 1 A GLY 0.510 1
ATOM 4 O O . GLY 1 1 ? A 9.981 12.933 2.113 1 1 A GLY 0.510 1
ATOM 5 N N . LEU 2 2 ? A 7.950 12.313 2.843 1 1 A LEU 0.530 1
ATOM 6 C CA . LEU 2 2 ? A 8.240 12.578 4.238 1 1 A LEU 0.530 1
ATOM 7 C C . LEU 2 2 ? A 8.342 11.284 5.024 1 1 A LEU 0.530 1
ATOM 8 O O . LEU 2 2 ? A 7.474 10.426 4.848 1 1 A LEU 0.530 1
ATOM 9 C CB . LEU 2 2 ? A 7.169 13.446 4.934 1 1 A LEU 0.530 1
ATOM 10 C CG . LEU 2 2 ? A 6.996 14.849 4.327 1 1 A LEU 0.530 1
ATOM 11 C CD1 . LEU 2 2 ? A 5.859 15.609 5.033 1 1 A LEU 0.530 1
ATOM 12 C CD2 . LEU 2 2 ? A 8.298 15.667 4.380 1 1 A LEU 0.530 1
ATOM 13 N N . PRO 3 3 ? A 9.359 11.033 5.850 1 1 A PRO 0.880 1
ATOM 14 C CA . PRO 3 3 ? A 9.459 9.827 6.643 1 1 A PRO 0.880 1
ATOM 15 C C . PRO 3 3 ? A 8.436 9.807 7.741 1 1 A PRO 0.880 1
ATOM 16 O O . PRO 3 3 ? A 8.072 10.849 8.277 1 1 A PRO 0.880 1
ATOM 17 C CB . PRO 3 3 ? A 10.885 9.852 7.218 1 1 A PRO 0.880 1
ATOM 18 C CG . PRO 3 3 ? A 11.261 11.337 7.252 1 1 A PRO 0.880 1
ATOM 19 C CD . PRO 3 3 ? A 10.491 11.926 6.070 1 1 A PRO 0.880 1
ATOM 20 N N . CYS 4 4 ? A 7.961 8.608 8.095 1 1 A CYS 0.860 1
ATOM 21 C CA . CYS 4 4 ? A 6.913 8.448 9.080 1 1 A CYS 0.860 1
ATOM 22 C C . CYS 4 4 ? A 7.442 8.022 10.429 1 1 A CYS 0.860 1
ATOM 23 O O . CYS 4 4 ? A 6.680 7.705 11.337 1 1 A CYS 0.860 1
ATOM 24 C CB . CYS 4 4 ? A 5.895 7.413 8.581 1 1 A CYS 0.860 1
ATOM 25 S SG . CYS 4 4 ? A 5.136 7.990 7.040 1 1 A CYS 0.860 1
ATOM 26 N N . GLY 5 5 ? A 8.782 8.005 10.593 1 1 A GLY 0.860 1
ATOM 27 C CA . GLY 5 5 ? A 9.413 7.652 11.860 1 1 A GLY 0.860 1
ATOM 28 C C . GLY 5 5 ? A 9.396 6.185 12.170 1 1 A GLY 0.860 1
ATOM 29 O O . GLY 5 5 ? A 9.302 5.789 13.326 1 1 A GLY 0.860 1
ATOM 30 N N . GLU 6 6 ? A 9.499 5.344 11.130 1 1 A GLU 0.800 1
ATOM 31 C CA . GLU 6 6 ? A 9.415 3.920 11.294 1 1 A GLU 0.800 1
ATOM 32 C C . GLU 6 6 ? A 10.342 3.262 10.295 1 1 A GLU 0.800 1
ATOM 33 O O . GLU 6 6 ? A 10.343 3.569 9.100 1 1 A GLU 0.800 1
ATOM 34 C CB . GLU 6 6 ? A 7.955 3.434 11.140 1 1 A GLU 0.800 1
ATOM 35 C CG . GLU 6 6 ? A 7.770 1.926 11.447 1 1 A GLU 0.800 1
ATOM 36 C CD . GLU 6 6 ? A 6.356 1.392 11.233 1 1 A GLU 0.800 1
ATOM 37 O OE1 . GLU 6 6 ? A 6.057 0.295 11.765 1 1 A GLU 0.800 1
ATOM 38 O OE2 . GLU 6 6 ? A 5.562 2.032 10.502 1 1 A GLU 0.800 1
ATOM 39 N N . SER 7 7 ? A 11.207 2.359 10.785 1 1 A SER 0.740 1
ATOM 40 C CA . SER 7 7 ? A 12.005 1.474 9.954 1 1 A SER 0.740 1
ATOM 41 C C . SER 7 7 ? A 11.178 0.356 9.356 1 1 A SER 0.740 1
ATOM 42 O O . SER 7 7 ? A 10.387 -0.267 10.052 1 1 A SER 0.740 1
ATOM 43 C CB . SER 7 7 ? A 13.130 0.817 10.800 1 1 A SER 0.740 1
ATOM 44 O OG . SER 7 7 ? A 13.939 -0.099 10.058 1 1 A SER 0.740 1
ATOM 45 N N . CYS 8 8 ? A 11.427 0.010 8.082 1 1 A CYS 0.770 1
ATOM 46 C CA . CYS 8 8 ? A 10.932 -1.229 7.509 1 1 A CYS 0.770 1
ATOM 47 C C . CYS 8 8 ? A 12.089 -2.030 6.957 1 1 A CYS 0.770 1
ATOM 48 O O . CYS 8 8 ? A 12.005 -2.671 5.912 1 1 A CYS 0.770 1
ATOM 49 C CB . CYS 8 8 ? A 9.811 -1.054 6.456 1 1 A CYS 0.770 1
ATOM 50 S SG . CYS 8 8 ? A 10.196 0.153 5.161 1 1 A CYS 0.770 1
ATOM 51 N N . VAL 9 9 ? A 13.229 -2.028 7.684 1 1 A VAL 0.710 1
ATOM 52 C CA . VAL 9 9 ? A 14.349 -2.928 7.434 1 1 A VAL 0.710 1
ATOM 53 C C . VAL 9 9 ? A 13.949 -4.394 7.538 1 1 A VAL 0.710 1
ATOM 54 O O . VAL 9 9 ? A 14.364 -5.214 6.721 1 1 A VAL 0.710 1
ATOM 55 C CB . VAL 9 9 ? A 15.503 -2.642 8.397 1 1 A VAL 0.710 1
ATOM 56 C CG1 . VAL 9 9 ? A 16.613 -3.714 8.325 1 1 A VAL 0.710 1
ATOM 57 C CG2 . VAL 9 9 ? A 16.119 -1.267 8.069 1 1 A VAL 0.710 1
ATOM 58 N N . PHE 10 10 ? A 13.114 -4.730 8.540 1 1 A PHE 0.620 1
ATOM 59 C CA . PHE 10 10 ? A 12.626 -6.076 8.756 1 1 A PHE 0.620 1
ATOM 60 C C . PHE 10 10 ? A 11.111 -6.089 8.803 1 1 A PHE 0.620 1
ATOM 61 O O . PHE 10 10 ? A 10.453 -6.718 7.980 1 1 A PHE 0.620 1
ATOM 62 C CB . PHE 10 10 ? A 13.169 -6.673 10.082 1 1 A PHE 0.620 1
ATOM 63 C CG . PHE 10 10 ? A 14.657 -6.868 10.024 1 1 A PHE 0.620 1
ATOM 64 C CD1 . PHE 10 10 ? A 15.205 -7.901 9.254 1 1 A PHE 0.620 1
ATOM 65 C CD2 . PHE 10 10 ? A 15.528 -6.026 10.730 1 1 A PHE 0.620 1
ATOM 66 C CE1 . PHE 10 10 ? A 16.588 -8.090 9.183 1 1 A PHE 0.620 1
ATOM 67 C CE2 . PHE 10 10 ? A 16.914 -6.206 10.661 1 1 A PHE 0.620 1
ATOM 68 C CZ . PHE 10 10 ? A 17.443 -7.240 9.887 1 1 A PHE 0.620 1
ATOM 69 N N . ILE 11 11 ? A 10.508 -5.406 9.795 1 1 A ILE 0.650 1
ATOM 70 C CA . ILE 11 11 ? A 9.071 -5.287 9.950 1 1 A ILE 0.650 1
ATOM 71 C C . ILE 11 11 ? A 8.385 -4.546 8.800 1 1 A ILE 0.650 1
ATOM 72 O O . ILE 11 11 ? A 9.025 -3.723 8.149 1 1 A ILE 0.650 1
ATOM 73 C CB . ILE 11 11 ? A 8.712 -4.632 11.282 1 1 A ILE 0.650 1
ATOM 74 C CG1 . ILE 11 11 ? A 9.191 -3.163 11.346 1 1 A ILE 0.650 1
ATOM 75 C CG2 . ILE 11 11 ? A 9.283 -5.489 12.437 1 1 A ILE 0.650 1
ATOM 76 C CD1 . ILE 11 11 ? A 8.660 -2.394 12.559 1 1 A ILE 0.650 1
ATOM 77 N N . PRO 12 12 ? A 7.128 -4.774 8.456 1 1 A PRO 0.760 1
ATOM 78 C CA . PRO 12 12 ? A 6.367 -3.834 7.652 1 1 A PRO 0.760 1
ATOM 79 C C . PRO 12 12 ? A 6.088 -2.529 8.352 1 1 A PRO 0.760 1
ATOM 80 O O . PRO 12 12 ? A 6.298 -2.418 9.552 1 1 A PRO 0.760 1
ATOM 81 C CB . PRO 12 12 ? A 5.063 -4.586 7.371 1 1 A PRO 0.760 1
ATOM 82 C CG . PRO 12 12 ? A 4.858 -5.485 8.594 1 1 A PRO 0.760 1
ATOM 83 C CD . PRO 12 12 ? A 6.283 -5.809 9.044 1 1 A PRO 0.760 1
ATOM 84 N N . CYS 13 13 ? A 5.577 -1.542 7.600 1 1 A CYS 0.810 1
ATOM 85 C CA . CYS 13 13 ? A 5.189 -0.262 8.144 1 1 A CYS 0.810 1
ATOM 86 C C . CYS 13 13 ? A 3.819 -0.371 8.763 1 1 A CYS 0.810 1
ATOM 87 O O . CYS 13 13 ? A 2.814 -0.456 8.058 1 1 A CYS 0.810 1
ATOM 88 C CB . CYS 13 13 ? A 5.135 0.818 7.030 1 1 A CYS 0.810 1
ATOM 89 S SG . CYS 13 13 ? A 6.747 1.041 6.239 1 1 A CYS 0.810 1
ATOM 90 N N . ILE 14 14 ? A 3.706 -0.346 10.102 1 1 A ILE 0.730 1
ATOM 91 C CA . ILE 14 14 ? A 2.398 -0.285 10.727 1 1 A ILE 0.730 1
ATOM 92 C C . ILE 14 14 ? A 1.826 1.121 10.614 1 1 A ILE 0.730 1
ATOM 93 O O . ILE 14 14 ? A 0.613 1.331 10.672 1 1 A ILE 0.730 1
ATOM 94 C CB . ILE 14 14 ? A 2.407 -0.791 12.161 1 1 A ILE 0.730 1
ATOM 95 C CG1 . ILE 14 14 ? A 0.987 -1.187 12.623 1 1 A ILE 0.730 1
ATOM 96 C CG2 . ILE 14 14 ? A 3.049 0.232 13.123 1 1 A ILE 0.730 1
ATOM 97 C CD1 . ILE 14 14 ? A 0.997 -2.007 13.920 1 1 A ILE 0.730 1
ATOM 98 N N . THR 15 15 ? A 2.683 2.133 10.323 1 1 A THR 0.750 1
ATOM 99 C CA . THR 15 15 ? A 2.256 3.469 9.896 1 1 A THR 0.750 1
ATOM 100 C C . THR 15 15 ? A 1.516 3.523 8.574 1 1 A THR 0.750 1
ATOM 101 O O . THR 15 15 ? A 1.033 4.582 8.177 1 1 A THR 0.750 1
ATOM 102 C CB . THR 15 15 ? A 3.349 4.524 9.828 1 1 A THR 0.750 1
ATOM 103 O OG1 . THR 15 15 ? A 4.399 4.155 8.947 1 1 A THR 0.750 1
ATOM 104 C CG2 . THR 15 15 ? A 3.922 4.732 11.235 1 1 A THR 0.750 1
ATOM 105 N N . THR 16 16 ? A 1.287 2.370 7.908 1 1 A THR 0.720 1
ATOM 106 C CA . THR 16 16 ? A 0.289 2.197 6.849 1 1 A THR 0.720 1
ATOM 107 C C . THR 16 16 ? A -1.089 2.643 7.292 1 1 A THR 0.720 1
ATOM 108 O O . THR 16 16 ? A -1.870 3.168 6.503 1 1 A THR 0.720 1
ATOM 109 C CB . THR 16 16 ? A 0.207 0.765 6.327 1 1 A THR 0.720 1
ATOM 110 O OG1 . THR 16 16 ? A 1.430 0.387 5.721 1 1 A THR 0.720 1
ATOM 111 C CG2 . THR 16 16 ? A -0.841 0.607 5.214 1 1 A THR 0.720 1
ATOM 112 N N . VAL 17 17 ? A -1.392 2.545 8.606 1 1 A VAL 0.640 1
ATOM 113 C CA . VAL 17 17 ? A -2.607 3.072 9.213 1 1 A VAL 0.640 1
ATOM 114 C C . VAL 17 17 ? A -2.840 4.572 8.960 1 1 A VAL 0.640 1
ATOM 115 O O . VAL 17 17 ? A -3.974 5.031 8.848 1 1 A VAL 0.640 1
ATOM 116 C CB . VAL 17 17 ? A -2.622 2.756 10.713 1 1 A VAL 0.640 1
ATOM 117 C CG1 . VAL 17 17 ? A -1.607 3.616 11.498 1 1 A VAL 0.640 1
ATOM 118 C CG2 . VAL 17 17 ? A -4.046 2.933 11.277 1 1 A VAL 0.640 1
ATOM 119 N N . VAL 18 18 ? A -1.758 5.371 8.824 1 1 A VAL 0.690 1
ATOM 120 C CA . VAL 18 18 ? A -1.819 6.794 8.526 1 1 A VAL 0.690 1
ATOM 121 C C . VAL 18 18 ? A -1.241 7.081 7.151 1 1 A VAL 0.690 1
ATOM 122 O O . VAL 18 18 ? A -0.863 8.207 6.831 1 1 A VAL 0.690 1
ATOM 123 C CB . VAL 18 18 ? A -1.160 7.672 9.592 1 1 A VAL 0.690 1
ATOM 124 C CG1 . VAL 18 18 ? A -1.980 7.602 10.900 1 1 A VAL 0.690 1
ATOM 125 C CG2 . VAL 18 18 ? A 0.312 7.274 9.828 1 1 A VAL 0.690 1
ATOM 126 N N . GLY 19 19 ? A -1.197 6.058 6.272 1 1 A GLY 0.780 1
ATOM 127 C CA . GLY 19 19 ? A -0.923 6.245 4.854 1 1 A GLY 0.780 1
ATOM 128 C C . GLY 19 19 ? A 0.489 6.032 4.420 1 1 A GLY 0.780 1
ATOM 129 O O . GLY 19 19 ? A 0.834 6.289 3.272 1 1 A GLY 0.780 1
ATOM 130 N N . CYS 20 20 ? A 1.362 5.562 5.314 1 1 A CYS 0.840 1
ATOM 131 C CA . CYS 20 20 ? A 2.750 5.366 4.962 1 1 A CYS 0.840 1
ATOM 132 C C . CYS 20 20 ? A 3.013 4.024 4.328 1 1 A CYS 0.840 1
ATOM 133 O O . CYS 20 20 ? A 2.311 3.052 4.560 1 1 A CYS 0.840 1
ATOM 134 C CB . CYS 20 20 ? A 3.655 5.510 6.187 1 1 A CYS 0.840 1
ATOM 135 S SG . CYS 20 20 ? A 3.342 7.071 7.059 1 1 A CYS 0.840 1
ATOM 136 N N . SER 21 21 ? A 4.074 3.928 3.523 1 1 A SER 0.850 1
ATOM 137 C CA . SER 21 21 ? A 4.418 2.681 2.869 1 1 A SER 0.850 1
ATOM 138 C C . SER 21 21 ? A 5.904 2.529 2.925 1 1 A SER 0.850 1
ATOM 139 O O . SER 21 21 ? A 6.635 3.509 3.066 1 1 A SER 0.850 1
ATOM 140 C CB . SER 21 21 ? A 3.989 2.630 1.378 1 1 A SER 0.850 1
ATOM 141 O OG . SER 21 21 ? A 2.567 2.652 1.270 1 1 A SER 0.850 1
ATOM 142 N N . CYS 22 22 ? A 6.402 1.282 2.817 1 1 A CYS 0.860 1
ATOM 143 C CA . CYS 22 22 ? A 7.824 1.011 2.848 1 1 A CYS 0.860 1
ATOM 144 C C . CYS 22 22 ? A 8.493 1.395 1.550 1 1 A CYS 0.860 1
ATOM 145 O O . CYS 22 22 ? A 8.137 0.903 0.482 1 1 A CYS 0.860 1
ATOM 146 C CB . CYS 22 22 ? A 8.117 -0.485 3.136 1 1 A CYS 0.860 1
ATOM 147 S SG . CYS 22 22 ? A 9.875 -0.835 3.433 1 1 A CYS 0.860 1
ATOM 148 N N . LYS 23 23 ? A 9.498 2.277 1.612 1 1 A LYS 0.780 1
ATOM 149 C CA . LYS 23 23 ? A 10.280 2.613 0.455 1 1 A LYS 0.780 1
ATOM 150 C C . LYS 23 23 ? A 11.726 2.420 0.776 1 1 A LYS 0.780 1
ATOM 151 O O . LYS 23 23 ? A 12.352 3.262 1.414 1 1 A LYS 0.780 1
ATOM 152 C CB . LYS 23 23 ? A 10.061 4.079 0.061 1 1 A LYS 0.780 1
ATOM 153 C CG . LYS 23 23 ? A 8.631 4.330 -0.421 1 1 A LYS 0.780 1
ATOM 154 C CD . LYS 23 23 ? A 8.623 5.250 -1.641 1 1 A LYS 0.780 1
ATOM 155 C CE . LYS 23 23 ? A 7.214 5.626 -2.082 1 1 A LYS 0.780 1
ATOM 156 N NZ . LYS 23 23 ? A 7.298 6.630 -3.161 1 1 A LYS 0.780 1
ATOM 157 N N . ASN 24 24 ? A 12.284 1.275 0.329 1 1 A ASN 0.660 1
ATOM 158 C CA . ASN 24 24 ? A 13.669 0.895 0.518 1 1 A ASN 0.660 1
ATOM 159 C C . ASN 24 24 ? A 14.156 1.051 1.952 1 1 A ASN 0.660 1
ATOM 160 O O . ASN 24 24 ? A 15.151 1.716 2.229 1 1 A ASN 0.660 1
ATOM 161 C CB . ASN 24 24 ? A 14.582 1.552 -0.543 1 1 A ASN 0.660 1
ATOM 162 C CG . ASN 24 24 ? A 15.959 0.895 -0.589 1 1 A ASN 0.660 1
ATOM 163 O OD1 . ASN 24 24 ? A 16.138 -0.274 -0.231 1 1 A ASN 0.660 1
ATOM 164 N ND2 . ASN 24 24 ? A 16.960 1.677 -1.057 1 1 A ASN 0.660 1
ATOM 165 N N . LYS 25 25 ? A 13.397 0.413 2.867 1 1 A LYS 0.720 1
ATOM 166 C CA . LYS 25 25 ? A 13.690 0.220 4.272 1 1 A LYS 0.720 1
ATOM 167 C C . LYS 25 25 ? A 13.287 1.370 5.171 1 1 A LYS 0.720 1
ATOM 168 O O . LYS 25 25 ? A 13.432 1.296 6.391 1 1 A LYS 0.720 1
ATOM 169 C CB . LYS 25 25 ? A 15.150 -0.200 4.526 1 1 A LYS 0.720 1
ATOM 170 C CG . LYS 25 25 ? A 15.501 -1.486 3.773 1 1 A LYS 0.720 1
ATOM 171 C CD . LYS 25 25 ? A 16.940 -1.940 4.027 1 1 A LYS 0.720 1
ATOM 172 C CE . LYS 25 25 ? A 17.226 -3.329 3.462 1 1 A LYS 0.720 1
ATOM 173 N NZ . LYS 25 25 ? A 17.200 -3.273 1.983 1 1 A LYS 0.720 1
ATOM 174 N N . VAL 26 26 ? A 12.668 2.416 4.603 1 1 A VAL 0.830 1
ATOM 175 C CA . VAL 26 26 ? A 12.145 3.529 5.363 1 1 A VAL 0.830 1
ATOM 176 C C . VAL 26 26 ? A 10.667 3.660 5.092 1 1 A VAL 0.830 1
ATOM 177 O O . VAL 26 26 ? A 10.222 3.652 3.944 1 1 A VAL 0.830 1
ATOM 178 C CB . VAL 26 26 ? A 12.842 4.830 4.994 1 1 A VAL 0.830 1
ATOM 179 C CG1 . VAL 26 26 ? A 12.284 6.014 5.817 1 1 A VAL 0.830 1
ATOM 180 C CG2 . VAL 26 26 ? A 14.359 4.692 5.241 1 1 A VAL 0.830 1
ATOM 181 N N . CYS 27 27 ? A 9.842 3.777 6.149 1 1 A CYS 0.870 1
ATOM 182 C CA . CYS 27 27 ? A 8.436 4.092 5.994 1 1 A CYS 0.870 1
ATOM 183 C C . CYS 27 27 ? A 8.233 5.560 5.650 1 1 A CYS 0.870 1
ATOM 184 O O . CYS 27 27 ? A 8.700 6.455 6.357 1 1 A CYS 0.870 1
ATOM 185 C CB . CYS 27 27 ? A 7.638 3.724 7.260 1 1 A CYS 0.870 1
ATOM 186 S SG . CYS 27 27 ? A 7.833 1.963 7.664 1 1 A CYS 0.870 1
ATOM 187 N N . TYR 28 28 ? A 7.534 5.828 4.535 1 1 A TYR 0.830 1
ATOM 188 C CA . TYR 28 28 ? A 7.444 7.134 3.916 1 1 A TYR 0.830 1
ATOM 189 C C . TYR 28 28 ? A 6.016 7.387 3.486 1 1 A TYR 0.830 1
ATOM 190 O O . TYR 28 28 ? A 5.307 6.455 3.117 1 1 A TYR 0.830 1
ATOM 191 C CB . TYR 28 28 ? A 8.282 7.161 2.604 1 1 A TYR 0.830 1
ATOM 192 C CG . TYR 28 28 ? A 9.619 7.802 2.771 1 1 A TYR 0.830 1
ATOM 193 C CD1 . TYR 28 28 ? A 9.710 9.194 2.799 1 1 A TYR 0.830 1
ATOM 194 C CD2 . TYR 28 28 ? A 10.795 7.050 2.808 1 1 A TYR 0.830 1
ATOM 195 C CE1 . TYR 28 28 ? A 10.953 9.831 2.901 1 1 A TYR 0.830 1
ATOM 196 C CE2 . TYR 28 28 ? A 12.043 7.686 2.886 1 1 A TYR 0.830 1
ATOM 197 C CZ . TYR 28 28 ? A 12.120 9.077 2.947 1 1 A TYR 0.830 1
ATOM 198 O OH . TYR 28 28 ? A 13.360 9.729 3.055 1 1 A TYR 0.830 1
ATOM 199 N N . ASN 29 29 ? A 5.585 8.665 3.474 1 1 A ASN 0.520 1
ATOM 200 C CA . ASN 29 29 ? A 4.325 9.085 2.895 1 1 A ASN 0.520 1
ATOM 201 C C . ASN 29 29 ? A 4.507 10.465 2.267 1 1 A ASN 0.520 1
ATOM 202 O O . ASN 29 29 ? A 4.794 11.394 3.013 1 1 A ASN 0.520 1
ATOM 203 C CB . ASN 29 29 ? A 3.263 9.217 4.018 1 1 A ASN 0.520 1
ATOM 204 C CG . ASN 29 29 ? A 1.924 9.649 3.435 1 1 A ASN 0.520 1
ATOM 205 O OD1 . ASN 29 29 ? A 1.549 9.225 2.343 1 1 A ASN 0.520 1
ATOM 206 N ND2 . ASN 29 29 ? A 1.225 10.579 4.121 1 1 A ASN 0.520 1
ATOM 207 N N . ASN 30 30 ? A 4.335 10.624 0.941 1 1 A ASN 0.460 1
ATOM 208 C CA . ASN 30 30 ? A 4.227 11.894 0.191 1 1 A ASN 0.460 1
ATOM 209 C C . ASN 30 30 ? A 5.229 13.056 0.335 1 1 A ASN 0.460 1
ATOM 210 O O . ASN 30 30 ? A 5.735 13.344 1.442 1 1 A ASN 0.460 1
ATOM 211 C CB . ASN 30 30 ? A 2.925 12.638 0.380 1 1 A ASN 0.460 1
ATOM 212 C CG . ASN 30 30 ? A 1.760 11.730 0.126 1 1 A ASN 0.460 1
ATOM 213 O OD1 . ASN 30 30 ? A 1.779 10.780 -0.660 1 1 A ASN 0.460 1
ATOM 214 N ND2 . ASN 30 30 ? A 0.683 12.111 0.843 1 1 A ASN 0.460 1
ATOM 215 O OXT . ASN 30 30 ? A 5.612 13.590 -0.718 1 1 A ASN 0.460 1
#
#
loop_
_atom_type.symbol
C
N
O
S
#
#
loop_
_ma_qa_metric.id
_ma_qa_metric.name
_ma_qa_metric.description
_ma_qa_metric.type
_ma_qa_metric.mode
_ma_qa_metric.type_other_details
_ma_qa_metric.software_group_id
1 QMEANDisCo 'Predicted accuracy according to all-atom lDDT in [0,1].'
'pLDDT all-atom in [0,1]' local . 5
2 QMEANDisCo 'Predicted accuracy according to all-atom lDDT in [0,1].'
'pLDDT all-atom in [0,1]' global . 5
3 GMQE
'Global Model Quality Estimate of the model accuracy, calculated by SWISS-MODEL.'
'normalized score' global . 6
#
#
loop_
_ma_qa_metric_global.ordinal_id
_ma_qa_metric_global.model_id
_ma_qa_metric_global.metric_id
_ma_qa_metric_global.metric_value
1 1 2 0.734
2 1 3 0.757
#
#
loop_
_ma_qa_metric_local.ordinal_id
_ma_qa_metric_local.model_id
_ma_qa_metric_local.label_asym_id
_ma_qa_metric_local.label_seq_id
_ma_qa_metric_local.label_comp_id
_ma_qa_metric_local.metric_id
_ma_qa_metric_local.metric_value
1 1 A 1 GLY 1 0.510
2 1 A 2 LEU 1 0.530
3 1 A 3 PRO 1 0.880
4 1 A 4 CYS 1 0.860
5 1 A 5 GLY 1 0.860
6 1 A 6 GLU 1 0.800
7 1 A 7 SER 1 0.740
8 1 A 8 CYS 1 0.770
9 1 A 9 VAL 1 0.710
10 1 A 10 PHE 1 0.620
11 1 A 11 ILE 1 0.650
12 1 A 12 PRO 1 0.760
13 1 A 13 CYS 1 0.810
14 1 A 14 ILE 1 0.730
15 1 A 15 THR 1 0.750
16 1 A 16 THR 1 0.720
17 1 A 17 VAL 1 0.640
18 1 A 18 VAL 1 0.690
19 1 A 19 GLY 1 0.780
20 1 A 20 CYS 1 0.840
21 1 A 21 SER 1 0.850
22 1 A 22 CYS 1 0.860
23 1 A 23 LYS 1 0.780
24 1 A 24 ASN 1 0.660
25 1 A 25 LYS 1 0.720
26 1 A 26 VAL 1 0.830
27 1 A 27 CYS 1 0.870
28 1 A 28 TYR 1 0.830
29 1 A 29 ASN 1 0.520
30 1 A 30 ASN 1 0.460
#
#
loop_
_pdbx_data_usage.id
_pdbx_data_usage.type
_pdbx_data_usage.details
_pdbx_data_usage.url
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