data_SMR-559c1505ca5ca7cf4c05f1e46c4ee3f3_2 _entry.id SMR-559c1505ca5ca7cf4c05f1e46c4ee3f3_2 _struct.entry_id SMR-559c1505ca5ca7cf4c05f1e46c4ee3f3_2 _struct.pdbx_model_details ;This model was generated unsupervised by the SWISS-MODEL homology-modelling pipeline for the SWISS-MODEL Repository, a database of annotated 3D protein structure models. The modelled monomer covers following UniProtKB entries: - Q86YJ5/ MARH9_HUMAN, E3 ubiquitin-protein ligase MARCHF9 Estimated model accuracy of this model is 0.007, calculated by SWISS-MODEL as Global Model Quality Estimate (GMQE). ; _struct.pdbx_structure_determination_methodology computational _struct.title 'Model for UniProtKB entries Q86YJ5' _audit_conform.dict_location https://raw.githubusercontent.com/ihmwg/ModelCIF/80e1e22/dist/mmcif_ma.dic _audit_conform.dict_name mmcif_ma.dic _audit_conform.dict_version 1.4.7 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary 'The SWISS-MODEL Repository - new features and functionality' 'Nucleic Acids Res.' 45 D313 D319 2017 27899672 10.1093/nar/gkw1132 2 'SWISS-MODEL: homology modelling of protein structures and complexes' 'Nucleic Acids Res.' 46 W296 W303 2018 29788355 10.1093/nar/gky427 3 'ProMod3 - A versatile homology modelling toolbox' 'PLoS Comput. Biol.' 17(1) 1 18 2021 33507980 10.1371/journal.pcbi.1008667 4 'QMEANDisCo - distance constraints applied on model quality estimation' Bioinformatics 36 1765 1771 2020 31697312 10.1093/bioinformatics/btz828 5 'OpenStructure: an integrated software framework for computational structural biology' 'Acta Crystallogr., Sect. D: Biol. Crystallogr.' 69 701 709 2013 23633579 10.1107/S0907444913007051 6 'BLAST+: architecture and applications' 'BMC Bioinf.' 10 421 . 2009 20003500 10.1186/1471-2105-10-421 7 'HH-suite3 for fast remote homology detection and deep protein annotation' 'BMC Bioinf.' 20 473 . 2019 31521110 10.1186/s12859-019-3019-7 # # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Bienert, S.' 1 primary 'Waterhouse, A.' 2 primary 'de Beer, T.A.P.' 3 primary 'Tauriello, G.' 4 primary 'Studer, G.' 5 primary 'Bordoli, L.' 6 primary 'Schwede, T.' 7 2 'Waterhouse, A.' 8 2 'Bertoni, M.' 9 2 'Bienert, S.' 10 2 'Studer, G.' 11 2 'Tauriello, G.' 12 2 'Gumienny, R.' 13 2 'Heer, F.T.' 14 2 'de Beer, T.A.P.' 15 2 'Rempfer, C.' 16 2 'Bordoli, L.' 17 2 'Lepore, R.' 18 2 'Schwede, T.' 19 3 'Studer, G.' 20 3 'Tauriello, G.' 21 3 'Bienert, S.' 22 3 'Biasini, M.' 23 3 'Johner, N.' 24 3 'Schwede, T.' 25 4 'Studer, G.' 26 4 'Rempfer, C.' 27 4 'Waterhouse, A.M.' 28 4 'Gumienny, R.' 29 4 'Haas, J.' 30 4 'Schwede, T.' 31 5 'Biasini, M.' 32 5 'Schmidt, T.' 33 5 'Bienert, S.' 34 5 'Mariani, V.' 35 5 'Studer, G.' 36 5 'Haas, J.' 37 5 'Johner, N.' 38 5 'Schenk, A.D.' 39 5 'Philippsen, A.' 40 5 'Schwede, T.' 41 6 'Camacho, C.' 42 6 'Coulouris, G.' 43 6 'Avagyan, V.' 44 6 'Ma, N.' 45 6 'Papadopoulos, J.' 46 6 'Bealer, K.' 47 6 'Madden, T.L.' 48 7 'Steinegger, M.' 49 7 'Meier, M.' 50 7 'Mirdita, M.' 51 7 'Vohringer, H.' 52 7 'Haunsberger, S.J.' 53 7 'Soding, J.' 54 # # loop_ _software.pdbx_ordinal _software.name _software.classification _software.description _software.version _software.type _software.location _software.citation_id 1 SWISS-MODEL 'model building' 'Homology modelling web service' 2025-06.4 package https://swissmodel.expasy.org 2 2 ProMod3 'model building' 'Modular homology modelling engine' 3.5.0 library https://git.scicore.unibas.ch/schwede/ProMod3 3 3 QMEAN 'model building' 'QMEAN - Qualitative Model Energy ANalysis' 4.4.0 library https://git.scicore.unibas.ch/schwede/QMEAN 4 4 OpenStructure 'data processing' 'Open-Source Computational Structural Biology Framework' 2.10.0 package https://openstructure.org/ 5 5 BLAST 'data collection' . 2.14.1 package https://blast.ncbi.nlm.nih.gov 6 6 HH-suite 'data collection' 'HH-suite3 for sensitive sequence searching' 3.2.0 package https://github.com/soedinglab/hh-suite 7 # # loop_ _ma_software_group.ordinal_id _ma_software_group.group_id _ma_software_group.software_id _ma_software_group.parameter_group_id 1 1 5 . 2 2 1 . 3 2 4 . 4 2 5 . 5 2 6 . 6 3 1 . 7 3 4 . 8 4 1 . 9 4 2 . 10 4 4 . 11 5 3 . 12 6 1 . 13 6 3 . 14 6 4 . # # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Bienert, S.' 1 'Waterhouse, A.' 2 'de Beer, T.A.P.' 3 'Tauriello, G.' 4 'Studer, G.' 5 'Bordoli, L.' 6 'Schwede, T.' 7 # # loop_ _chem_comp.id _chem_comp.type _chem_comp.name _chem_comp.formula _chem_comp.formula_weight _chem_comp.ma_provenance ALA 'L-peptide linking' ALANINE 'C3 H7 N O2' 89.094 'CCD Core' ARG 'L-peptide linking' ARGININE 'C6 H15 N4 O2 1' 175.212 'CCD Core' ASN 'L-peptide linking' ASPARAGINE 'C4 H8 N2 O3' 132.119 'CCD Core' ASP 'L-peptide linking' 'ASPARTIC ACID' 'C4 H7 N O4' 133.103 'CCD Core' CYS 'L-peptide linking' CYSTEINE 'C3 H7 N O2 S' 121.154 'CCD Core' GLN 'L-peptide linking' GLUTAMINE 'C5 H10 N2 O3' 146.146 'CCD Core' GLU 'L-peptide linking' 'GLUTAMIC ACID' 'C5 H9 N O4' 147.130 'CCD Core' GLY 'peptide linking' GLYCINE 'C2 H5 N O2' 75.067 'CCD Core' HIS 'L-peptide linking' HISTIDINE 'C6 H10 N3 O2 1' 156.165 'CCD Core' ILE 'L-peptide linking' ISOLEUCINE 'C6 H13 N O2' 131.175 'CCD Core' LEU 'L-peptide linking' LEUCINE 'C6 H13 N O2' 131.175 'CCD Core' LYS 'L-peptide linking' LYSINE 'C6 H15 N2 O2 1' 147.198 'CCD Core' MET 'L-peptide linking' METHIONINE 'C5 H11 N O2 S' 149.208 'CCD Core' PHE 'L-peptide linking' PHENYLALANINE 'C9 H11 N O2' 165.192 'CCD Core' PRO 'L-peptide linking' PROLINE 'C5 H9 N O2' 115.132 'CCD Core' SER 'L-peptide linking' SERINE 'C3 H7 N O3' 105.093 'CCD Core' THR 'L-peptide linking' THREONINE 'C4 H9 N O3' 119.120 'CCD Core' TRP 'L-peptide linking' TRYPTOPHAN 'C11 H12 N2 O2' 204.229 'CCD Core' TYR 'L-peptide linking' TYROSINE 'C9 H11 N O3' 181.191 'CCD Core' VAL 'L-peptide linking' VALINE 'C5 H11 N O2' 117.148 'CCD Core' # # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.details 1 polymer man . 44033.103 1 . # # loop_ _struct_ref.id _struct_ref.entity_id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_align_begin _struct_ref.pdbx_seq_one_letter_code _struct_ref.details 1 1 UNP MARH9_HUMAN Q86YJ5 1 ;MLKSRLRMFLNELKLLVLTGGGRPRAEPQPRGGRGGGCGWAPFAGCSTRDGDGDEEEYYGSEPRARGLAG DKEPRAGPLPPPAPPLPPPGALDALSLSSSLDSGLRTPQCRICFQGPEQGELLSPCRCDGSVRCTHQPCL IRWISERGSWSCELCYFKYQVLAISTKNPLQWQAISLTVIEKVQIAAIVLGSLFLVASISWLIWSSLSPS AKWQRQDLLFQICYGMYGFMDVVCIGLIIHEGSSVYRIFKRWQAVNQQWKVLNYDKTKDIGGDAGGGTAG KSGPRNSRTGPTSGATSRPPAAQRMRTLLPQRCGYTILHLLGQLRPPDARSSSHSGREVVMRVTTV ; 'E3 ubiquitin-protein ligase MARCHF9' # # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.seq_align_beg _struct_ref_seq.seq_align_end _struct_ref_seq.db_align_beg _struct_ref_seq.db_align_end 1 1 1 346 1 346 # # loop_ _ma_target_ref_db_details.target_entity_id _ma_target_ref_db_details.db_name _ma_target_ref_db_details.db_name_other_details _ma_target_ref_db_details.db_code _ma_target_ref_db_details.db_accession _ma_target_ref_db_details.seq_db_isoform _ma_target_ref_db_details.seq_db_align_begin _ma_target_ref_db_details.seq_db_align_end _ma_target_ref_db_details.ncbi_taxonomy_id _ma_target_ref_db_details.organism_scientific _ma_target_ref_db_details.seq_db_sequence_version_date _ma_target_ref_db_details.seq_db_sequence_checksum _ma_target_ref_db_details.is_primary 1 UNP . MARH9_HUMAN Q86YJ5 . 1 346 9606 'Homo sapiens (Human)' 2004-03-01 FA6142B973A359B8 . # # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_strand_id _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can 1 polypeptide(L) no no A ;MLKSRLRMFLNELKLLVLTGGGRPRAEPQPRGGRGGGCGWAPFAGCSTRDGDGDEEEYYGSEPRARGLAG DKEPRAGPLPPPAPPLPPPGALDALSLSSSLDSGLRTPQCRICFQGPEQGELLSPCRCDGSVRCTHQPCL IRWISERGSWSCELCYFKYQVLAISTKNPLQWQAISLTVIEKVQIAAIVLGSLFLVASISWLIWSSLSPS AKWQRQDLLFQICYGMYGFMDVVCIGLIIHEGSSVYRIFKRWQAVNQQWKVLNYDKTKDIGGDAGGGTAG KSGPRNSRTGPTSGATSRPPAAQRMRTLLPQRCGYTILHLLGQLRPPDARSSSHSGREVVMRVTTV ; ;MLKSRLRMFLNELKLLVLTGGGRPRAEPQPRGGRGGGCGWAPFAGCSTRDGDGDEEEYYGSEPRARGLAG DKEPRAGPLPPPAPPLPPPGALDALSLSSSLDSGLRTPQCRICFQGPEQGELLSPCRCDGSVRCTHQPCL IRWISERGSWSCELCYFKYQVLAISTKNPLQWQAISLTVIEKVQIAAIVLGSLFLVASISWLIWSSLSPS AKWQRQDLLFQICYGMYGFMDVVCIGLIIHEGSSVYRIFKRWQAVNQQWKVLNYDKTKDIGGDAGGGTAG KSGPRNSRTGPTSGATSRPPAAQRMRTLLPQRCGYTILHLLGQLRPPDARSSSHSGREVVMRVTTV ; # # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET . 1 2 LEU . 1 3 LYS . 1 4 SER . 1 5 ARG . 1 6 LEU . 1 7 ARG . 1 8 MET . 1 9 PHE . 1 10 LEU . 1 11 ASN . 1 12 GLU . 1 13 LEU . 1 14 LYS . 1 15 LEU . 1 16 LEU . 1 17 VAL . 1 18 LEU . 1 19 THR . 1 20 GLY . 1 21 GLY . 1 22 GLY . 1 23 ARG . 1 24 PRO . 1 25 ARG . 1 26 ALA . 1 27 GLU . 1 28 PRO . 1 29 GLN . 1 30 PRO . 1 31 ARG . 1 32 GLY . 1 33 GLY . 1 34 ARG . 1 35 GLY . 1 36 GLY . 1 37 GLY . 1 38 CYS . 1 39 GLY . 1 40 TRP . 1 41 ALA . 1 42 PRO . 1 43 PHE . 1 44 ALA . 1 45 GLY . 1 46 CYS . 1 47 SER . 1 48 THR . 1 49 ARG . 1 50 ASP . 1 51 GLY . 1 52 ASP . 1 53 GLY . 1 54 ASP . 1 55 GLU . 1 56 GLU . 1 57 GLU . 1 58 TYR . 1 59 TYR . 1 60 GLY . 1 61 SER . 1 62 GLU . 1 63 PRO . 1 64 ARG . 1 65 ALA . 1 66 ARG . 1 67 GLY . 1 68 LEU . 1 69 ALA . 1 70 GLY . 1 71 ASP . 1 72 LYS . 1 73 GLU . 1 74 PRO . 1 75 ARG . 1 76 ALA . 1 77 GLY . 1 78 PRO . 1 79 LEU . 1 80 PRO . 1 81 PRO . 1 82 PRO . 1 83 ALA . 1 84 PRO . 1 85 PRO . 1 86 LEU . 1 87 PRO . 1 88 PRO . 1 89 PRO . 1 90 GLY . 1 91 ALA . 1 92 LEU . 1 93 ASP . 1 94 ALA . 1 95 LEU . 1 96 SER . 1 97 LEU . 1 98 SER . 1 99 SER . 1 100 SER . 1 101 LEU . 1 102 ASP . 1 103 SER . 1 104 GLY . 1 105 LEU . 1 106 ARG . 1 107 THR . 1 108 PRO . 1 109 GLN . 1 110 CYS . 1 111 ARG . 1 112 ILE . 1 113 CYS . 1 114 PHE . 1 115 GLN . 1 116 GLY . 1 117 PRO . 1 118 GLU . 1 119 GLN . 1 120 GLY . 1 121 GLU . 1 122 LEU . 1 123 LEU . 1 124 SER . 1 125 PRO . 1 126 CYS . 1 127 ARG . 1 128 CYS . 1 129 ASP . 1 130 GLY . 1 131 SER . 1 132 VAL . 1 133 ARG . 1 134 CYS . 1 135 THR . 1 136 HIS . 1 137 GLN . 1 138 PRO . 1 139 CYS . 1 140 LEU . 1 141 ILE . 1 142 ARG . 1 143 TRP . 1 144 ILE . 1 145 SER . 1 146 GLU . 1 147 ARG . 1 148 GLY . 1 149 SER . 1 150 TRP . 1 151 SER . 1 152 CYS . 1 153 GLU . 1 154 LEU . 1 155 CYS . 1 156 TYR . 1 157 PHE . 1 158 LYS . 1 159 TYR . 1 160 GLN . 1 161 VAL . 1 162 LEU . 1 163 ALA . 1 164 ILE . 1 165 SER . 1 166 THR . 1 167 LYS . 1 168 ASN . 1 169 PRO . 1 170 LEU . 1 171 GLN . 1 172 TRP . 1 173 GLN . 1 174 ALA . 1 175 ILE . 1 176 SER . 1 177 LEU . 1 178 THR . 1 179 VAL . 1 180 ILE . 1 181 GLU . 1 182 LYS . 1 183 VAL . 1 184 GLN . 1 185 ILE . 1 186 ALA . 1 187 ALA . 1 188 ILE . 1 189 VAL . 1 190 LEU . 1 191 GLY . 1 192 SER . 1 193 LEU . 1 194 PHE . 1 195 LEU . 1 196 VAL . 1 197 ALA . 1 198 SER . 1 199 ILE . 1 200 SER . 1 201 TRP . 1 202 LEU . 1 203 ILE . 1 204 TRP . 1 205 SER . 1 206 SER . 1 207 LEU . 1 208 SER . 1 209 PRO . 1 210 SER . 1 211 ALA . 1 212 LYS . 1 213 TRP . 1 214 GLN . 1 215 ARG . 1 216 GLN . 1 217 ASP . 1 218 LEU . 1 219 LEU . 1 220 PHE . 1 221 GLN . 1 222 ILE . 1 223 CYS . 1 224 TYR . 1 225 GLY . 1 226 MET . 1 227 TYR . 1 228 GLY . 1 229 PHE . 1 230 MET . 1 231 ASP . 1 232 VAL . 1 233 VAL . 1 234 CYS . 1 235 ILE . 1 236 GLY . 1 237 LEU . 1 238 ILE . 1 239 ILE . 1 240 HIS . 1 241 GLU . 1 242 GLY . 1 243 SER . 1 244 SER . 1 245 VAL . 1 246 TYR . 1 247 ARG . 1 248 ILE . 1 249 PHE . 1 250 LYS . 1 251 ARG . 1 252 TRP . 1 253 GLN . 1 254 ALA . 1 255 VAL . 1 256 ASN . 1 257 GLN . 1 258 GLN . 1 259 TRP . 1 260 LYS . 1 261 VAL . 1 262 LEU . 1 263 ASN . 1 264 TYR . 1 265 ASP . 1 266 LYS . 1 267 THR . 1 268 LYS . 1 269 ASP . 1 270 ILE . 1 271 GLY . 1 272 GLY . 1 273 ASP . 1 274 ALA . 1 275 GLY . 1 276 GLY . 1 277 GLY . 1 278 THR . 1 279 ALA . 1 280 GLY . 1 281 LYS . 1 282 SER . 1 283 GLY . 1 284 PRO . 1 285 ARG . 1 286 ASN . 1 287 SER . 1 288 ARG . 1 289 THR . 1 290 GLY . 1 291 PRO . 1 292 THR . 1 293 SER . 1 294 GLY . 1 295 ALA . 1 296 THR . 1 297 SER . 1 298 ARG . 1 299 PRO . 1 300 PRO . 1 301 ALA . 1 302 ALA . 1 303 GLN . 1 304 ARG . 1 305 MET . 1 306 ARG . 1 307 THR . 1 308 LEU . 1 309 LEU . 1 310 PRO . 1 311 GLN . 1 312 ARG . 1 313 CYS . 1 314 GLY . 1 315 TYR . 1 316 THR . 1 317 ILE . 1 318 LEU . 1 319 HIS . 1 320 LEU . 1 321 LEU . 1 322 GLY . 1 323 GLN . 1 324 LEU . 1 325 ARG . 1 326 PRO . 1 327 PRO . 1 328 ASP . 1 329 ALA . 1 330 ARG . 1 331 SER . 1 332 SER . 1 333 SER . 1 334 HIS . 1 335 SER . 1 336 GLY . 1 337 ARG . 1 338 GLU . 1 339 VAL . 1 340 VAL . 1 341 MET . 1 342 ARG . 1 343 VAL . 1 344 THR . 1 345 THR . 1 346 VAL . # # loop_ _struct_asym.id _struct_asym.entity_id _struct_asym.details A 1 . # # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code A 1 1 MET 1 ? ? ? A . A 1 2 LEU 2 ? ? ? A . A 1 3 LYS 3 ? ? ? A . A 1 4 SER 4 ? ? ? A . A 1 5 ARG 5 ? ? ? A . A 1 6 LEU 6 ? ? ? A . A 1 7 ARG 7 ? ? ? A . A 1 8 MET 8 ? ? ? A . A 1 9 PHE 9 ? ? ? A . A 1 10 LEU 10 ? ? ? A . A 1 11 ASN 11 ? ? ? A . A 1 12 GLU 12 ? ? ? A . A 1 13 LEU 13 ? ? ? A . A 1 14 LYS 14 ? ? ? A . A 1 15 LEU 15 ? ? ? A . A 1 16 LEU 16 ? ? ? A . A 1 17 VAL 17 ? ? ? A . A 1 18 LEU 18 ? ? ? A . A 1 19 THR 19 ? ? ? A . A 1 20 GLY 20 ? ? ? A . A 1 21 GLY 21 ? ? ? A . A 1 22 GLY 22 ? ? ? A . A 1 23 ARG 23 ? ? ? A . A 1 24 PRO 24 ? ? ? A . A 1 25 ARG 25 ? ? ? A . A 1 26 ALA 26 ? ? ? A . A 1 27 GLU 27 ? ? ? A . A 1 28 PRO 28 ? ? ? A . A 1 29 GLN 29 ? ? ? A . A 1 30 PRO 30 ? ? ? A . A 1 31 ARG 31 ? ? ? A . A 1 32 GLY 32 ? ? ? A . A 1 33 GLY 33 ? ? ? A . A 1 34 ARG 34 ? ? ? A . A 1 35 GLY 35 ? ? ? A . A 1 36 GLY 36 ? ? ? A . A 1 37 GLY 37 ? ? ? A . A 1 38 CYS 38 ? ? ? A . A 1 39 GLY 39 ? ? ? A . A 1 40 TRP 40 ? ? ? A . A 1 41 ALA 41 ? ? ? A . A 1 42 PRO 42 ? ? ? A . A 1 43 PHE 43 ? ? ? A . A 1 44 ALA 44 ? ? ? A . A 1 45 GLY 45 ? ? ? A . A 1 46 CYS 46 ? ? ? A . A 1 47 SER 47 ? ? ? A . A 1 48 THR 48 ? ? ? A . A 1 49 ARG 49 ? ? ? A . A 1 50 ASP 50 ? ? ? A . A 1 51 GLY 51 ? ? ? A . A 1 52 ASP 52 ? ? ? A . A 1 53 GLY 53 ? ? ? A . A 1 54 ASP 54 ? ? ? A . A 1 55 GLU 55 ? ? ? A . A 1 56 GLU 56 ? ? ? A . A 1 57 GLU 57 ? ? ? A . A 1 58 TYR 58 ? ? ? A . A 1 59 TYR 59 ? ? ? A . A 1 60 GLY 60 ? ? ? A . A 1 61 SER 61 ? ? ? A . A 1 62 GLU 62 ? ? ? A . A 1 63 PRO 63 ? ? ? A . A 1 64 ARG 64 ? ? ? A . A 1 65 ALA 65 ? ? ? A . A 1 66 ARG 66 ? ? ? A . A 1 67 GLY 67 ? ? ? A . A 1 68 LEU 68 ? ? ? A . A 1 69 ALA 69 ? ? ? A . A 1 70 GLY 70 ? ? ? A . A 1 71 ASP 71 ? ? ? A . A 1 72 LYS 72 ? ? ? A . A 1 73 GLU 73 ? ? ? A . A 1 74 PRO 74 ? ? ? A . A 1 75 ARG 75 ? ? ? A . A 1 76 ALA 76 ? ? ? A . A 1 77 GLY 77 ? ? ? A . A 1 78 PRO 78 ? ? ? A . A 1 79 LEU 79 ? ? ? A . A 1 80 PRO 80 ? ? ? A . A 1 81 PRO 81 ? ? ? A . A 1 82 PRO 82 ? ? ? A . A 1 83 ALA 83 ? ? ? A . A 1 84 PRO 84 ? ? ? A . A 1 85 PRO 85 ? ? ? A . A 1 86 LEU 86 ? ? ? A . A 1 87 PRO 87 ? ? ? A . A 1 88 PRO 88 ? ? ? A . A 1 89 PRO 89 ? ? ? A . A 1 90 GLY 90 ? ? ? A . A 1 91 ALA 91 ? ? ? A . A 1 92 LEU 92 ? ? ? A . A 1 93 ASP 93 ? ? ? A . A 1 94 ALA 94 ? ? ? A . A 1 95 LEU 95 ? ? ? A . A 1 96 SER 96 ? ? ? A . A 1 97 LEU 97 ? ? ? A . A 1 98 SER 98 ? ? ? A . A 1 99 SER 99 ? ? ? A . A 1 100 SER 100 ? ? ? A . A 1 101 LEU 101 ? ? ? A . A 1 102 ASP 102 ? ? ? A . A 1 103 SER 103 ? ? ? A . A 1 104 GLY 104 ? ? ? A . A 1 105 LEU 105 ? ? ? A . A 1 106 ARG 106 ? ? ? A . A 1 107 THR 107 ? ? ? A . A 1 108 PRO 108 ? ? ? A . A 1 109 GLN 109 ? ? ? A . A 1 110 CYS 110 ? ? ? A . A 1 111 ARG 111 ? ? ? A . A 1 112 ILE 112 ? ? ? A . A 1 113 CYS 113 ? ? ? A . A 1 114 PHE 114 ? ? ? A . A 1 115 GLN 115 ? ? ? A . A 1 116 GLY 116 ? ? ? A . A 1 117 PRO 117 ? ? ? A . A 1 118 GLU 118 ? ? ? A . A 1 119 GLN 119 ? ? ? A . A 1 120 GLY 120 ? ? ? A . A 1 121 GLU 121 ? ? ? A . A 1 122 LEU 122 ? ? ? A . A 1 123 LEU 123 ? ? ? A . A 1 124 SER 124 ? ? ? A . A 1 125 PRO 125 ? ? ? A . A 1 126 CYS 126 ? ? ? A . A 1 127 ARG 127 ? ? ? A . A 1 128 CYS 128 ? ? ? A . A 1 129 ASP 129 ? ? ? A . A 1 130 GLY 130 ? ? ? A . A 1 131 SER 131 ? ? ? A . A 1 132 VAL 132 ? ? ? A . A 1 133 ARG 133 ? ? ? A . A 1 134 CYS 134 ? ? ? A . A 1 135 THR 135 ? ? ? A . A 1 136 HIS 136 ? ? ? A . A 1 137 GLN 137 ? ? ? A . A 1 138 PRO 138 ? ? ? A . A 1 139 CYS 139 ? ? ? A . A 1 140 LEU 140 ? ? ? A . A 1 141 ILE 141 ? ? ? A . A 1 142 ARG 142 ? ? ? A . A 1 143 TRP 143 ? ? ? A . A 1 144 ILE 144 ? ? ? A . A 1 145 SER 145 ? ? ? A . A 1 146 GLU 146 ? ? ? A . A 1 147 ARG 147 ? ? ? A . A 1 148 GLY 148 ? ? ? A . A 1 149 SER 149 ? ? ? A . A 1 150 TRP 150 ? ? ? A . A 1 151 SER 151 ? ? ? A . A 1 152 CYS 152 ? ? ? A . A 1 153 GLU 153 ? ? ? A . A 1 154 LEU 154 ? ? ? A . A 1 155 CYS 155 ? ? ? A . A 1 156 TYR 156 ? ? ? A . A 1 157 PHE 157 ? ? ? A . A 1 158 LYS 158 ? ? ? A . A 1 159 TYR 159 ? ? ? A . A 1 160 GLN 160 ? ? ? A . A 1 161 VAL 161 ? ? ? A . A 1 162 LEU 162 ? ? ? A . A 1 163 ALA 163 ? ? ? A . A 1 164 ILE 164 ? ? ? A . A 1 165 SER 165 ? ? ? A . A 1 166 THR 166 ? ? ? A . A 1 167 LYS 167 ? ? ? A . A 1 168 ASN 168 ? ? ? A . A 1 169 PRO 169 ? ? ? A . A 1 170 LEU 170 ? ? ? A . A 1 171 GLN 171 ? ? ? A . A 1 172 TRP 172 ? ? ? A . A 1 173 GLN 173 ? ? ? A . A 1 174 ALA 174 174 ALA ALA A . A 1 175 ILE 175 175 ILE ILE A . A 1 176 SER 176 176 SER SER A . A 1 177 LEU 177 177 LEU LEU A . A 1 178 THR 178 178 THR THR A . A 1 179 VAL 179 179 VAL VAL A . A 1 180 ILE 180 180 ILE ILE A . A 1 181 GLU 181 181 GLU GLU A . A 1 182 LYS 182 182 LYS LYS A . A 1 183 VAL 183 183 VAL VAL A . A 1 184 GLN 184 184 GLN GLN A . A 1 185 ILE 185 185 ILE ILE A . A 1 186 ALA 186 186 ALA ALA A . A 1 187 ALA 187 187 ALA ALA A . A 1 188 ILE 188 188 ILE ILE A . A 1 189 VAL 189 189 VAL VAL A . A 1 190 LEU 190 ? ? ? A . A 1 191 GLY 191 ? ? ? A . A 1 192 SER 192 ? ? ? A . A 1 193 LEU 193 ? ? ? A . A 1 194 PHE 194 ? ? ? A . A 1 195 LEU 195 ? ? ? A . A 1 196 VAL 196 ? ? ? A . A 1 197 ALA 197 ? ? ? A . A 1 198 SER 198 ? ? ? A . A 1 199 ILE 199 ? ? ? A . A 1 200 SER 200 ? ? ? A . A 1 201 TRP 201 ? ? ? A . A 1 202 LEU 202 ? ? ? A . A 1 203 ILE 203 ? ? ? A . A 1 204 TRP 204 ? ? ? A . A 1 205 SER 205 ? ? ? A . A 1 206 SER 206 ? ? ? A . A 1 207 LEU 207 ? ? ? A . A 1 208 SER 208 ? ? ? A . A 1 209 PRO 209 ? ? ? A . A 1 210 SER 210 ? ? ? A . A 1 211 ALA 211 ? ? ? A . A 1 212 LYS 212 ? ? ? A . A 1 213 TRP 213 ? ? ? A . A 1 214 GLN 214 ? ? ? A . A 1 215 ARG 215 ? ? ? A . A 1 216 GLN 216 ? ? ? A . A 1 217 ASP 217 ? ? ? A . A 1 218 LEU 218 ? ? ? A . A 1 219 LEU 219 ? ? ? A . A 1 220 PHE 220 ? ? ? A . A 1 221 GLN 221 ? ? ? A . A 1 222 ILE 222 ? ? ? A . A 1 223 CYS 223 ? ? ? A . A 1 224 TYR 224 ? ? ? A . A 1 225 GLY 225 ? ? ? A . A 1 226 MET 226 ? ? ? A . A 1 227 TYR 227 ? ? ? A . A 1 228 GLY 228 ? ? ? A . A 1 229 PHE 229 ? ? ? A . A 1 230 MET 230 ? ? ? A . A 1 231 ASP 231 ? ? ? A . A 1 232 VAL 232 ? ? ? A . A 1 233 VAL 233 ? ? ? A . A 1 234 CYS 234 ? ? ? A . A 1 235 ILE 235 ? ? ? A . A 1 236 GLY 236 ? ? ? A . A 1 237 LEU 237 ? ? ? A . A 1 238 ILE 238 ? ? ? A . A 1 239 ILE 239 ? ? ? A . A 1 240 HIS 240 ? ? ? A . A 1 241 GLU 241 ? ? ? A . A 1 242 GLY 242 ? ? ? A . A 1 243 SER 243 ? ? ? A . A 1 244 SER 244 ? ? ? A . A 1 245 VAL 245 ? ? ? A . A 1 246 TYR 246 ? ? ? A . A 1 247 ARG 247 ? ? ? A . A 1 248 ILE 248 ? ? ? A . A 1 249 PHE 249 ? ? ? A . A 1 250 LYS 250 ? ? ? A . A 1 251 ARG 251 ? ? ? A . A 1 252 TRP 252 ? ? ? A . A 1 253 GLN 253 ? ? ? A . A 1 254 ALA 254 ? ? ? A . A 1 255 VAL 255 ? ? ? A . A 1 256 ASN 256 ? ? ? A . A 1 257 GLN 257 ? ? ? A . A 1 258 GLN 258 ? ? ? A . A 1 259 TRP 259 ? ? ? A . A 1 260 LYS 260 ? ? ? A . A 1 261 VAL 261 ? ? ? A . A 1 262 LEU 262 ? ? ? A . A 1 263 ASN 263 ? ? ? A . A 1 264 TYR 264 ? ? ? A . A 1 265 ASP 265 ? ? ? A . A 1 266 LYS 266 ? ? ? A . A 1 267 THR 267 ? ? ? A . A 1 268 LYS 268 ? ? ? A . A 1 269 ASP 269 ? ? ? A . A 1 270 ILE 270 ? ? ? A . A 1 271 GLY 271 ? ? ? A . A 1 272 GLY 272 ? ? ? A . A 1 273 ASP 273 ? ? ? A . A 1 274 ALA 274 ? ? ? A . A 1 275 GLY 275 ? ? ? A . A 1 276 GLY 276 ? ? ? A . A 1 277 GLY 277 ? ? ? A . A 1 278 THR 278 ? ? ? A . A 1 279 ALA 279 ? ? ? A . A 1 280 GLY 280 ? ? ? A . A 1 281 LYS 281 ? ? ? A . A 1 282 SER 282 ? ? ? A . A 1 283 GLY 283 ? ? ? A . A 1 284 PRO 284 ? ? ? A . A 1 285 ARG 285 ? ? ? A . A 1 286 ASN 286 ? ? ? A . A 1 287 SER 287 ? ? ? A . A 1 288 ARG 288 ? ? ? A . A 1 289 THR 289 ? ? ? A . A 1 290 GLY 290 ? ? ? A . A 1 291 PRO 291 ? ? ? A . A 1 292 THR 292 ? ? ? A . A 1 293 SER 293 ? ? ? A . A 1 294 GLY 294 ? ? ? A . A 1 295 ALA 295 ? ? ? A . A 1 296 THR 296 ? ? ? A . A 1 297 SER 297 ? ? ? A . A 1 298 ARG 298 ? ? ? A . A 1 299 PRO 299 ? ? ? A . A 1 300 PRO 300 ? ? ? A . A 1 301 ALA 301 ? ? ? A . A 1 302 ALA 302 ? ? ? A . A 1 303 GLN 303 ? ? ? A . A 1 304 ARG 304 ? ? ? A . A 1 305 MET 305 ? ? ? A . A 1 306 ARG 306 ? ? ? A . A 1 307 THR 307 ? ? ? A . A 1 308 LEU 308 ? ? ? A . A 1 309 LEU 309 ? ? ? A . A 1 310 PRO 310 ? ? ? A . A 1 311 GLN 311 ? ? ? A . A 1 312 ARG 312 ? ? ? A . A 1 313 CYS 313 ? ? ? A . A 1 314 GLY 314 ? ? ? A . A 1 315 TYR 315 ? ? ? A . A 1 316 THR 316 ? ? ? A . A 1 317 ILE 317 ? ? ? A . A 1 318 LEU 318 ? ? ? A . A 1 319 HIS 319 ? ? ? A . A 1 320 LEU 320 ? ? ? A . A 1 321 LEU 321 ? ? ? A . A 1 322 GLY 322 ? ? ? A . A 1 323 GLN 323 ? ? ? A . A 1 324 LEU 324 ? ? ? A . A 1 325 ARG 325 ? ? ? A . A 1 326 PRO 326 ? ? ? A . A 1 327 PRO 327 ? ? ? A . A 1 328 ASP 328 ? ? ? A . A 1 329 ALA 329 ? ? ? A . A 1 330 ARG 330 ? ? ? A . A 1 331 SER 331 ? ? ? A . A 1 332 SER 332 ? ? ? A . A 1 333 SER 333 ? ? ? A . A 1 334 HIS 334 ? ? ? A . A 1 335 SER 335 ? ? ? A . A 1 336 GLY 336 ? ? ? A . A 1 337 ARG 337 ? ? ? A . A 1 338 GLU 338 ? ? ? A . A 1 339 VAL 339 ? ? ? A . A 1 340 VAL 340 ? ? ? A . A 1 341 MET 341 ? ? ? A . A 1 342 ARG 342 ? ? ? A . A 1 343 VAL 343 ? ? ? A . A 1 344 THR 344 ? ? ? A . A 1 345 THR 345 ? ? ? A . A 1 346 VAL 346 ? ? ? A . # # loop_ _ma_data.id _ma_data.name _ma_data.content_type _ma_data.content_type_other_details 1 'ERAD-associated E3 ubiquitin-protein ligase DOA10 {PDB ID=8pd0, label_asym_id=A, auth_asym_id=A, SMTL ID=8pd0.1.A}' 'template structure' . 2 . target . 3 'Target-template alignment by BLAST to 8pd0, label_asym_id=A' 'target-template alignment' . 4 'model 2' 'model coordinates' . 5 SMTL 'reference database' . 6 PDB 'reference database' . 7 'Template search output' other 'Results of the sequence search' # # loop_ _ma_data_group.ordinal_id _ma_data_group.group_id _ma_data_group.data_id 1 1 2 2 1 5 3 1 6 4 2 7 5 3 2 6 3 1 7 3 3 8 4 1 9 4 3 10 5 4 # # loop_ _ma_data_ref_db.data_id _ma_data_ref_db.name _ma_data_ref_db.location_url _ma_data_ref_db.version _ma_data_ref_db.release_date 5 SMTL https://swissmodel.expasy.org/templates/ . 2025-07-09 6 PDB https://www.wwpdb.org . 2025-07-04 # # loop_ _ma_target_entity.entity_id _ma_target_entity.data_id _ma_target_entity.origin 1 2 'reference database' # # loop_ _ma_target_entity_instance.asym_id _ma_target_entity_instance.entity_id _ma_target_entity_instance.details A 1 . # # loop_ _ma_template_trans_matrix.id _ma_template_trans_matrix.rot_matrix[1][1] _ma_template_trans_matrix.rot_matrix[2][1] _ma_template_trans_matrix.rot_matrix[3][1] _ma_template_trans_matrix.rot_matrix[1][2] _ma_template_trans_matrix.rot_matrix[2][2] _ma_template_trans_matrix.rot_matrix[3][2] _ma_template_trans_matrix.rot_matrix[1][3] _ma_template_trans_matrix.rot_matrix[2][3] _ma_template_trans_matrix.rot_matrix[3][3] _ma_template_trans_matrix.tr_vector[1] _ma_template_trans_matrix.tr_vector[2] _ma_template_trans_matrix.tr_vector[3] 1 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0 0 0 # # loop_ _ma_template_details.ordinal_id _ma_template_details.template_id _ma_template_details.template_origin _ma_template_details.template_entity_type _ma_template_details.template_trans_matrix_id _ma_template_details.template_data_id _ma_template_details.target_asym_id _ma_template_details.template_label_asym_id _ma_template_details.template_label_entity_id _ma_template_details.template_model_num _ma_template_details.template_auth_asym_id 1 1 'reference database' polymer 1 1 A A 1 1 A # # loop_ _ma_template_poly.template_id _ma_template_poly.seq_one_letter_code _ma_template_poly.seq_one_letter_code_can 1 ;MDVDSDVNVSRLRDELHKVANEETDTATFNDDAPSGATCRICRGEATEDNPLFHPCKCRGSIKYMHESCL LEWVASKNIDISKPGADVKCDICHYPIQFKTIYAENMPEKIPFSLLLSKSILTFFEKARLALTIGLAAVL YIIGVPLVWNMFGKLYTMMLDGSSPYPGDFLKSLIYGYDQSATPELTTRAIFYQLLQNHSFTSLQFIMIV ILHIALYFQYDMIVREDVFSKMVFHKIGPRLSPKDLKSRLKERFPMMDDRMVEYLAREMRAHDENRQEQG HDRLNMPAAAADNNNNVINPRNDNVPPQDPNDHRNFENLRHVDELDHDEATEEHENNDSDNSLPSGDDSS RILPGSSSDNEEDEEAEGQQQQQQPEEEADYRDHIEPNPIDMWANRRAQNEFDDLIAAQQNAINRPNAPV FIPPPAQNRAGNVDQDEQDFGAAVGVPPAQANPDDQGQGPLVINLKLKLLNVIAYFIIAVVFTAIYLAIS YLFPTFIGFGLLKIYFGIFKVILRGLCHLYYLSGAHIAYNGLTKLVPKVDVAMSWISDHLIHDIIYLYNG YTENTMKHSIFIRALPALTTYLTSVSIVCASSNLVSRGYGRENGMSNPTRRLIFQILFALKCTFKVFTLF FIELAGFPILAGVMLDFSLFCPILASNSRMLWVPSICAIWPPFSLFVYWTIGTLYMYWFAKYIGMIRKNI IRPGVLFFIRSPEDPNIKILHDSLIHPMSIQLSRLCLSMFIYAIFIVLGFGFHTRIFFPFMLKSNLLSVP EAYKPTSIISWKFNTILLTLYFTKRILESSSYVKPLLERYWKTIFKLCSRKLRLSSFILGKDTPTERGHI VYRNLFYKYIAAKNAEWSNQELFTKPKTLEQAEELFGQVRDVHAYFVPDGVLMRVPSSDIVSRNYVQTMF VPVTKDDKLLKPLDLERIKERNKRAAGEFGYLDEQNTEYDQYYIVYVPPDFRLRYMTLLGLVWLFASILM LGVTFISQALINFVCSFGFLPVVKLLLGERNKVYVAWKELSDISYSYLNIYYVCVGSVCLSKIAKDILHF TEGQNTLDEHAVDENEVEEVEHDIPERDINNAPVNNINNVEEGQGIFMAIFNSIFDSMLVKYNLMVFIAI MIAVIRTMVSWVVLTDGILACYNYLTIRVFGNSSYTIGNSKWFKYDESLLFVVWIISSMVNFGTGYKSLK LFFRNRNTSKLNFLKTMALELFKQGFLHMVIYVLPIIILSLVFLRDVSTKQIIDISHGSRSFTLSLNESF PTWTRMQDIYFGLLIALESFTFFFQATVLFIQWFKSTVQNVKDEVYTKGRALENLPDES ; ;MDVDSDVNVSRLRDELHKVANEETDTATFNDDAPSGATCRICRGEATEDNPLFHPCKCRGSIKYMHESCL LEWVASKNIDISKPGADVKCDICHYPIQFKTIYAENMPEKIPFSLLLSKSILTFFEKARLALTIGLAAVL YIIGVPLVWNMFGKLYTMMLDGSSPYPGDFLKSLIYGYDQSATPELTTRAIFYQLLQNHSFTSLQFIMIV ILHIALYFQYDMIVREDVFSKMVFHKIGPRLSPKDLKSRLKERFPMMDDRMVEYLAREMRAHDENRQEQG HDRLNMPAAAADNNNNVINPRNDNVPPQDPNDHRNFENLRHVDELDHDEATEEHENNDSDNSLPSGDDSS RILPGSSSDNEEDEEAEGQQQQQQPEEEADYRDHIEPNPIDMWANRRAQNEFDDLIAAQQNAINRPNAPV FIPPPAQNRAGNVDQDEQDFGAAVGVPPAQANPDDQGQGPLVINLKLKLLNVIAYFIIAVVFTAIYLAIS YLFPTFIGFGLLKIYFGIFKVILRGLCHLYYLSGAHIAYNGLTKLVPKVDVAMSWISDHLIHDIIYLYNG YTENTMKHSIFIRALPALTTYLTSVSIVCASSNLVSRGYGRENGMSNPTRRLIFQILFALKCTFKVFTLF FIELAGFPILAGVMLDFSLFCPILASNSRMLWVPSICAIWPPFSLFVYWTIGTLYMYWFAKYIGMIRKNI IRPGVLFFIRSPEDPNIKILHDSLIHPMSIQLSRLCLSMFIYAIFIVLGFGFHTRIFFPFMLKSNLLSVP EAYKPTSIISWKFNTILLTLYFTKRILESSSYVKPLLERYWKTIFKLCSRKLRLSSFILGKDTPTERGHI VYRNLFYKYIAAKNAEWSNQELFTKPKTLEQAEELFGQVRDVHAYFVPDGVLMRVPSSDIVSRNYVQTMF VPVTKDDKLLKPLDLERIKERNKRAAGEFGYLDEQNTEYDQYYIVYVPPDFRLRYMTLLGLVWLFASILM LGVTFISQALINFVCSFGFLPVVKLLLGERNKVYVAWKELSDISYSYLNIYYVCVGSVCLSKIAKDILHF TEGQNTLDEHAVDENEVEEVEHDIPERDINNAPVNNINNVEEGQGIFMAIFNSIFDSMLVKYNLMVFIAI MIAVIRTMVSWVVLTDGILACYNYLTIRVFGNSSYTIGNSKWFKYDESLLFVVWIISSMVNFGTGYKSLK LFFRNRNTSKLNFLKTMALELFKQGFLHMVIYVLPIIILSLVFLRDVSTKQIIDISHGSRSFTLSLNESF PTWTRMQDIYFGLLIALESFTFFFQATVLFIQWFKSTVQNVKDEVYTKGRALENLPDES ; # # loop_ _ma_template_poly_segment.id _ma_template_poly_segment.template_id _ma_template_poly_segment.residue_number_begin _ma_template_poly_segment.residue_number_end 1 1 39 134 # # loop_ _ma_template_ref_db_details.template_id _ma_template_ref_db_details.db_name _ma_template_ref_db_details.db_name_other_details _ma_template_ref_db_details.db_accession_code _ma_template_ref_db_details.db_version_date 1 PDB . 8pd0 2024-01-17 # # loop_ _ma_target_template_poly_mapping.id _ma_target_template_poly_mapping.template_segment_id _ma_target_template_poly_mapping.target_asym_id _ma_target_template_poly_mapping.target_seq_id_begin _ma_target_template_poly_mapping.target_seq_id_end 1 1 A 1 346 # # loop_ _ma_alignment_info.alignment_id _ma_alignment_info.data_id _ma_alignment_info.software_group_id _ma_alignment_info.alignment_length _ma_alignment_info.alignment_type _ma_alignment_info.alignment_mode 1 3 1 362 'target-template pairwise alignment' local # # loop_ _ma_alignment_details.ordinal_id _ma_alignment_details.alignment_id _ma_alignment_details.template_segment_id _ma_alignment_details.target_asym_id _ma_alignment_details.score_type _ma_alignment_details.score_type_other_details _ma_alignment_details.score_value _ma_alignment_details.percent_sequence_identity _ma_alignment_details.sequence_identity_denominator _ma_alignment_details.sequence_identity_denominator_other_details 1 1 1 A 'BLAST e-value' . 5.33e-06 32.500 'Number of aligned residue pairs (not including the gaps)' . # # loop_ _ma_alignment.ordinal_id _ma_alignment.alignment_id _ma_alignment.target_template_flag _ma_alignment.sequence 1 1 1 MLKSRLRMFLNELKLLVLTGGGRPRAEPQPRGGRGGGCGWAPFAGCSTRDGDGDEEEYYGSEPRARGLAGDKEPRAGPLPPPAPPLPPPGALDALSLSSSLDSGLRTPQCRICF-QGPEQGELLSPCRCDGSVRCTHQPCLIRWISER--------GSWSCELCYFKYQVLAISTKNPLQWQAIS-------LTVIEKVQIAAIVLGSLFLVASISWLIWSSLSPSAKWQRQDLLFQICYGMYGFMDVVCIGLIIHEGSSVYRIFKRWQAVNQQWKVLNYDKTKDIGGDAGGGTAGKSGPRNSRTGPTSGATSRPPAAQRMRTLLPQRCGYTILHLLGQLRPPDARSSSHSGREVVMRVTTV 2 1 2 -------------------------------------------------------------------------------------------------------------CRICRGEATEDNPLFHPCKCRGSIKYMHESCLLEWVASKNIDISKPGADVKCDICHYPIQFKTIYAENMPEKIPFSLLLSKSILTFFEKARLALTI------------------------------------------------------------------------------------------------------------------------------------------------------------- # # loop_ _ma_protocol_step.ordinal_id _ma_protocol_step.protocol_id _ma_protocol_step.step_id _ma_protocol_step.method_type _ma_protocol_step.step_name _ma_protocol_step.details _ma_protocol_step.software_group_id _ma_protocol_step.input_data_group_id _ma_protocol_step.output_data_group_id 1 1 1 'template search' 'template search' 'SWISS-MODEL template search in PDB' 2 1 2 2 1 2 'template selection' 'template selection' 'Automatic template selection by SWISS-MODEL' 3 2 4 3 1 3 modeling 'homology modeling' 'SWISS-MODEL auto-model mode using ProMod3 on 8pd0.1' 4 3 5 # # loop_ _ma_model_list.ordinal_id _ma_model_list.model_name _ma_model_list.data_id _ma_model_list.model_type _ma_model_list.model_type_other_details 1 'model 2' 4 'Homology model' . # # loop_ _ma_model_group.id _ma_model_group.name _ma_model_group.details 1 . . # # loop_ _ma_model_group_link.group_id _ma_model_group_link.model_id 1 1 # # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_alt_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.auth_seq_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.label_entity_id _atom_site.auth_asym_id _atom_site.auth_comp_id _atom_site.B_iso_or_equiv _atom_site.pdbx_PDB_model_num ATOM 1 N N . ALA 174 174 ? A 154.624 145.531 166.961 1 1 A ALA 0.500 1 ATOM 2 C CA . ALA 174 174 ? A 154.800 144.832 165.642 1 1 A ALA 0.500 1 ATOM 3 C C . ALA 174 174 ? A 153.515 144.280 165.042 1 1 A ALA 0.500 1 ATOM 4 O O . ALA 174 174 ? A 153.174 144.674 163.936 1 1 A ALA 0.500 1 ATOM 5 C CB . ALA 174 174 ? A 155.898 143.756 165.764 1 1 A ALA 0.500 1 ATOM 6 N N . ILE 175 175 ? A 152.729 143.432 165.763 1 1 A ILE 0.530 1 ATOM 7 C CA . ILE 175 175 ? A 151.444 142.902 165.285 1 1 A ILE 0.530 1 ATOM 8 C C . ILE 175 175 ? A 150.497 144.004 164.836 1 1 A ILE 0.530 1 ATOM 9 O O . ILE 175 175 ? A 150.023 143.980 163.705 1 1 A ILE 0.530 1 ATOM 10 C CB . ILE 175 175 ? A 150.794 142.037 166.369 1 1 A ILE 0.530 1 ATOM 11 C CG1 . ILE 175 175 ? A 151.687 140.802 166.642 1 1 A ILE 0.530 1 ATOM 12 C CG2 . ILE 175 175 ? A 149.356 141.609 165.980 1 1 A ILE 0.530 1 ATOM 13 C CD1 . ILE 175 175 ? A 151.300 140.014 167.899 1 1 A ILE 0.530 1 ATOM 14 N N . SER 176 176 ? A 150.287 145.055 165.662 1 1 A SER 0.580 1 ATOM 15 C CA . SER 176 176 ? A 149.459 146.199 165.296 1 1 A SER 0.580 1 ATOM 16 C C . SER 176 176 ? A 149.855 146.897 164.005 1 1 A SER 0.580 1 ATOM 17 O O . SER 176 176 ? A 149.000 147.175 163.176 1 1 A SER 0.580 1 ATOM 18 C CB . SER 176 176 ? A 149.425 147.276 166.413 1 1 A SER 0.580 1 ATOM 19 O OG . SER 176 176 ? A 149.131 146.689 167.683 1 1 A SER 0.580 1 ATOM 20 N N . LEU 177 177 ? A 151.163 147.147 163.778 1 1 A LEU 0.600 1 ATOM 21 C CA . LEU 177 177 ? A 151.682 147.712 162.539 1 1 A LEU 0.600 1 ATOM 22 C C . LEU 177 177 ? A 151.404 146.821 161.340 1 1 A LEU 0.600 1 ATOM 23 O O . LEU 177 177 ? A 150.795 147.255 160.367 1 1 A LEU 0.600 1 ATOM 24 C CB . LEU 177 177 ? A 153.210 147.952 162.659 1 1 A LEU 0.600 1 ATOM 25 C CG . LEU 177 177 ? A 153.608 149.061 163.654 1 1 A LEU 0.600 1 ATOM 26 C CD1 . LEU 177 177 ? A 155.134 149.109 163.835 1 1 A LEU 0.600 1 ATOM 27 C CD2 . LEU 177 177 ? A 153.102 150.428 163.166 1 1 A LEU 0.600 1 ATOM 28 N N . THR 178 178 ? A 151.733 145.516 161.451 1 1 A THR 0.660 1 ATOM 29 C CA . THR 178 178 ? A 151.483 144.517 160.417 1 1 A THR 0.660 1 ATOM 30 C C . THR 178 178 ? A 150.013 144.385 160.057 1 1 A THR 0.660 1 ATOM 31 O O . THR 178 178 ? A 149.650 144.278 158.888 1 1 A THR 0.660 1 ATOM 32 C CB . THR 178 178 ? A 151.957 143.127 160.836 1 1 A THR 0.660 1 ATOM 33 O OG1 . THR 178 178 ? A 153.349 143.113 161.105 1 1 A THR 0.660 1 ATOM 34 C CG2 . THR 178 178 ? A 151.729 142.090 159.727 1 1 A THR 0.660 1 ATOM 35 N N . VAL 179 179 ? A 149.105 144.385 161.059 1 1 A VAL 0.700 1 ATOM 36 C CA . VAL 179 179 ? A 147.663 144.413 160.833 1 1 A VAL 0.700 1 ATOM 37 C C . VAL 179 179 ? A 147.239 145.680 160.104 1 1 A VAL 0.700 1 ATOM 38 O O . VAL 179 179 ? A 146.555 145.592 159.087 1 1 A VAL 0.700 1 ATOM 39 C CB . VAL 179 179 ? A 146.861 144.241 162.130 1 1 A VAL 0.700 1 ATOM 40 C CG1 . VAL 179 179 ? A 145.340 144.426 161.920 1 1 A VAL 0.700 1 ATOM 41 C CG2 . VAL 179 179 ? A 147.101 142.821 162.679 1 1 A VAL 0.700 1 ATOM 42 N N . ILE 180 180 ? A 147.693 146.878 160.547 1 1 A ILE 0.710 1 ATOM 43 C CA . ILE 180 180 ? A 147.368 148.157 159.913 1 1 A ILE 0.710 1 ATOM 44 C C . ILE 180 180 ? A 147.805 148.198 158.454 1 1 A ILE 0.710 1 ATOM 45 O O . ILE 180 180 ? A 146.993 148.504 157.580 1 1 A ILE 0.710 1 ATOM 46 C CB . ILE 180 180 ? A 147.932 149.356 160.695 1 1 A ILE 0.710 1 ATOM 47 C CG1 . ILE 180 180 ? A 147.223 149.485 162.067 1 1 A ILE 0.710 1 ATOM 48 C CG2 . ILE 180 180 ? A 147.801 150.685 159.907 1 1 A ILE 0.710 1 ATOM 49 C CD1 . ILE 180 180 ? A 147.967 150.396 163.054 1 1 A ILE 0.710 1 ATOM 50 N N . GLU 181 181 ? A 149.057 147.802 158.139 1 1 A GLU 0.730 1 ATOM 51 C CA . GLU 181 181 ? A 149.568 147.735 156.779 1 1 A GLU 0.730 1 ATOM 52 C C . GLU 181 181 ? A 148.769 146.796 155.879 1 1 A GLU 0.730 1 ATOM 53 O O . GLU 181 181 ? A 148.364 147.161 154.776 1 1 A GLU 0.730 1 ATOM 54 C CB . GLU 181 181 ? A 151.048 147.291 156.798 1 1 A GLU 0.730 1 ATOM 55 C CG . GLU 181 181 ? A 152.012 148.348 157.394 1 1 A GLU 0.730 1 ATOM 56 C CD . GLU 181 181 ? A 153.458 147.852 157.462 1 1 A GLU 0.730 1 ATOM 57 O OE1 . GLU 181 181 ? A 153.708 146.663 157.132 1 1 A GLU 0.730 1 ATOM 58 O OE2 . GLU 181 181 ? A 154.326 148.675 157.853 1 1 A GLU 0.730 1 ATOM 59 N N . LYS 182 182 ? A 148.443 145.576 156.360 1 1 A LYS 0.740 1 ATOM 60 C CA . LYS 182 182 ? A 147.595 144.633 155.644 1 1 A LYS 0.740 1 ATOM 61 C C . LYS 182 182 ? A 146.181 145.134 155.376 1 1 A LYS 0.740 1 ATOM 62 O O . LYS 182 182 ? A 145.665 144.971 154.271 1 1 A LYS 0.740 1 ATOM 63 C CB . LYS 182 182 ? A 147.485 143.286 156.393 1 1 A LYS 0.740 1 ATOM 64 C CG . LYS 182 182 ? A 148.792 142.485 156.373 1 1 A LYS 0.740 1 ATOM 65 C CD . LYS 182 182 ? A 148.668 141.161 157.140 1 1 A LYS 0.740 1 ATOM 66 C CE . LYS 182 182 ? A 149.955 140.338 157.101 1 1 A LYS 0.740 1 ATOM 67 N NZ . LYS 182 182 ? A 149.811 139.140 157.957 1 1 A LYS 0.740 1 ATOM 68 N N . VAL 183 183 ? A 145.533 145.770 156.377 1 1 A VAL 0.720 1 ATOM 69 C CA . VAL 183 183 ? A 144.219 146.400 156.240 1 1 A VAL 0.720 1 ATOM 70 C C . VAL 183 183 ? A 144.243 147.535 155.230 1 1 A VAL 0.720 1 ATOM 71 O O . VAL 183 183 ? A 143.380 147.616 154.357 1 1 A VAL 0.720 1 ATOM 72 C CB . VAL 183 183 ? A 143.669 146.910 157.578 1 1 A VAL 0.720 1 ATOM 73 C CG1 . VAL 183 183 ? A 142.362 147.721 157.410 1 1 A VAL 0.720 1 ATOM 74 C CG2 . VAL 183 183 ? A 143.368 145.707 158.490 1 1 A VAL 0.720 1 ATOM 75 N N . GLN 184 184 ? A 145.263 148.421 155.285 1 1 A GLN 0.690 1 ATOM 76 C CA . GLN 184 184 ? A 145.419 149.500 154.323 1 1 A GLN 0.690 1 ATOM 77 C C . GLN 184 184 ? A 145.620 149.010 152.899 1 1 A GLN 0.690 1 ATOM 78 O O . GLN 184 184 ? A 144.934 149.461 151.989 1 1 A GLN 0.690 1 ATOM 79 C CB . GLN 184 184 ? A 146.592 150.430 154.712 1 1 A GLN 0.690 1 ATOM 80 C CG . GLN 184 184 ? A 146.303 151.273 155.975 1 1 A GLN 0.690 1 ATOM 81 C CD . GLN 184 184 ? A 147.527 152.095 156.373 1 1 A GLN 0.690 1 ATOM 82 O OE1 . GLN 184 184 ? A 148.667 151.788 156.034 1 1 A GLN 0.690 1 ATOM 83 N NE2 . GLN 184 184 ? A 147.296 153.196 157.128 1 1 A GLN 0.690 1 ATOM 84 N N . ILE 185 185 ? A 146.515 148.024 152.675 1 1 A ILE 0.640 1 ATOM 85 C CA . ILE 185 185 ? A 146.731 147.419 151.362 1 1 A ILE 0.640 1 ATOM 86 C C . ILE 185 185 ? A 145.478 146.738 150.819 1 1 A ILE 0.640 1 ATOM 87 O O . ILE 185 185 ? A 145.105 146.943 149.667 1 1 A ILE 0.640 1 ATOM 88 C CB . ILE 185 185 ? A 147.900 146.429 151.389 1 1 A ILE 0.640 1 ATOM 89 C CG1 . ILE 185 185 ? A 149.224 147.177 151.681 1 1 A ILE 0.640 1 ATOM 90 C CG2 . ILE 185 185 ? A 148.008 145.625 150.066 1 1 A ILE 0.640 1 ATOM 91 C CD1 . ILE 185 185 ? A 150.381 146.241 152.053 1 1 A ILE 0.640 1 ATOM 92 N N . ALA 186 186 ? A 144.774 145.943 151.651 1 1 A ALA 0.640 1 ATOM 93 C CA . ALA 186 186 ? A 143.545 145.263 151.279 1 1 A ALA 0.640 1 ATOM 94 C C . ALA 186 186 ? A 142.369 146.186 150.946 1 1 A ALA 0.640 1 ATOM 95 O O . ALA 186 186 ? A 141.567 145.876 150.076 1 1 A ALA 0.640 1 ATOM 96 C CB . ALA 186 186 ? A 143.118 144.287 152.396 1 1 A ALA 0.640 1 ATOM 97 N N . ALA 187 187 ? A 142.228 147.317 151.669 1 1 A ALA 0.610 1 ATOM 98 C CA . ALA 187 187 ? A 141.267 148.375 151.391 1 1 A ALA 0.610 1 ATOM 99 C C . ALA 187 187 ? A 141.537 149.219 150.131 1 1 A ALA 0.610 1 ATOM 100 O O . ALA 187 187 ? A 140.611 149.780 149.550 1 1 A ALA 0.610 1 ATOM 101 C CB . ALA 187 187 ? A 141.218 149.349 152.591 1 1 A ALA 0.610 1 ATOM 102 N N . ILE 188 188 ? A 142.825 149.410 149.761 1 1 A ILE 0.500 1 ATOM 103 C CA . ILE 188 188 ? A 143.280 150.059 148.523 1 1 A ILE 0.500 1 ATOM 104 C C . ILE 188 188 ? A 143.042 149.248 147.238 1 1 A ILE 0.500 1 ATOM 105 O O . ILE 188 188 ? A 142.734 149.827 146.194 1 1 A ILE 0.500 1 ATOM 106 C CB . ILE 188 188 ? A 144.769 150.456 148.599 1 1 A ILE 0.500 1 ATOM 107 C CG1 . ILE 188 188 ? A 145.002 151.568 149.651 1 1 A ILE 0.500 1 ATOM 108 C CG2 . ILE 188 188 ? A 145.321 150.929 147.226 1 1 A ILE 0.500 1 ATOM 109 C CD1 . ILE 188 188 ? A 146.483 151.751 150.015 1 1 A ILE 0.500 1 ATOM 110 N N . VAL 189 189 ? A 143.259 147.917 147.281 1 1 A VAL 0.480 1 ATOM 111 C CA . VAL 189 189 ? A 143.068 146.997 146.160 1 1 A VAL 0.480 1 ATOM 112 C C . VAL 189 189 ? A 141.563 146.681 145.897 1 1 A VAL 0.480 1 ATOM 113 O O . VAL 189 189 ? A 140.741 146.712 146.849 1 1 A VAL 0.480 1 ATOM 114 C CB . VAL 189 189 ? A 143.914 145.717 146.353 1 1 A VAL 0.480 1 ATOM 115 C CG1 . VAL 189 189 ? A 143.712 144.690 145.219 1 1 A VAL 0.480 1 ATOM 116 C CG2 . VAL 189 189 ? A 145.416 146.080 146.397 1 1 A VAL 0.480 1 ATOM 117 O OXT . VAL 189 189 ? A 141.232 146.427 144.705 1 1 A VAL 0.480 1 # # loop_ _atom_type.symbol C N O # # loop_ _ma_qa_metric.id _ma_qa_metric.name _ma_qa_metric.description _ma_qa_metric.type _ma_qa_metric.mode _ma_qa_metric.type_other_details _ma_qa_metric.software_group_id 1 QMEANDisCo 'Predicted accuracy according to all-atom lDDT in [0,1].' 'pLDDT all-atom in [0,1]' local . 5 2 QMEANDisCo 'Predicted accuracy according to all-atom lDDT in [0,1].' 'pLDDT all-atom in [0,1]' global . 5 3 GMQE 'Global Model Quality Estimate of the model accuracy, calculated by SWISS-MODEL.' 'normalized score' global . 6 # # loop_ _ma_qa_metric_global.ordinal_id _ma_qa_metric_global.model_id _ma_qa_metric_global.metric_id _ma_qa_metric_global.metric_value 1 1 2 0.627 2 1 3 0.007 # # loop_ _ma_qa_metric_local.ordinal_id _ma_qa_metric_local.model_id _ma_qa_metric_local.label_asym_id _ma_qa_metric_local.label_seq_id _ma_qa_metric_local.label_comp_id _ma_qa_metric_local.metric_id _ma_qa_metric_local.metric_value 1 1 A 174 ALA 1 0.500 2 1 A 175 ILE 1 0.530 3 1 A 176 SER 1 0.580 4 1 A 177 LEU 1 0.600 5 1 A 178 THR 1 0.660 6 1 A 179 VAL 1 0.700 7 1 A 180 ILE 1 0.710 8 1 A 181 GLU 1 0.730 9 1 A 182 LYS 1 0.740 10 1 A 183 VAL 1 0.720 11 1 A 184 GLN 1 0.690 12 1 A 185 ILE 1 0.640 13 1 A 186 ALA 1 0.640 14 1 A 187 ALA 1 0.610 15 1 A 188 ILE 1 0.500 16 1 A 189 VAL 1 0.480 # # loop_ _pdbx_data_usage.id _pdbx_data_usage.type _pdbx_data_usage.details _pdbx_data_usage.url 1 license ;This SWISS-MODEL protein model is copyright. 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