data_SMR-cea162e3f8daafdf5deeeed21c7e2382_2 _entry.id SMR-cea162e3f8daafdf5deeeed21c7e2382_2 _struct.entry_id SMR-cea162e3f8daafdf5deeeed21c7e2382_2 _struct.pdbx_model_details ;This model was generated unsupervised by the SWISS-MODEL homology-modelling pipeline for the SWISS-MODEL Repository, a database of annotated 3D protein structure models. The modelled monomer covers following UniProtKB entries: - O54030/ MMDC_PROMO, Methylmalonyl-CoA decarboxylase subunit gamma Estimated model accuracy of this model is 0.065, calculated by SWISS-MODEL as Global Model Quality Estimate (GMQE). ; _struct.pdbx_structure_determination_methodology computational _struct.title 'Model for UniProtKB entries O54030' _audit_conform.dict_location https://raw.githubusercontent.com/ihmwg/ModelCIF/80e1e22/dist/mmcif_ma.dic _audit_conform.dict_name mmcif_ma.dic _audit_conform.dict_version 1.4.7 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary 'The SWISS-MODEL Repository - new features and functionality' 'Nucleic Acids Res.' 45 D313 D319 2017 27899672 10.1093/nar/gkw1132 2 'SWISS-MODEL: homology modelling of protein structures and complexes' 'Nucleic Acids Res.' 46 W296 W303 2018 29788355 10.1093/nar/gky427 3 'ProMod3 - A versatile homology modelling toolbox' 'PLoS Comput. Biol.' 17(1) 1 18 2021 33507980 10.1371/journal.pcbi.1008667 4 'QMEANDisCo - distance constraints applied on model quality estimation' Bioinformatics 36 1765 1771 2020 31697312 10.1093/bioinformatics/btz828 5 'OpenStructure: an integrated software framework for computational structural biology' 'Acta Crystallogr., Sect. D: Biol. Crystallogr.' 69 701 709 2013 23633579 10.1107/S0907444913007051 6 'BLAST+: architecture and applications' 'BMC Bioinf.' 10 421 . 2009 20003500 10.1186/1471-2105-10-421 7 'HH-suite3 for fast remote homology detection and deep protein annotation' 'BMC Bioinf.' 20 473 . 2019 31521110 10.1186/s12859-019-3019-7 # # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Bienert, S.' 1 primary 'Waterhouse, A.' 2 primary 'de Beer, T.A.P.' 3 primary 'Tauriello, G.' 4 primary 'Studer, G.' 5 primary 'Bordoli, L.' 6 primary 'Schwede, T.' 7 2 'Waterhouse, A.' 8 2 'Bertoni, M.' 9 2 'Bienert, S.' 10 2 'Studer, G.' 11 2 'Tauriello, G.' 12 2 'Gumienny, R.' 13 2 'Heer, F.T.' 14 2 'de Beer, T.A.P.' 15 2 'Rempfer, C.' 16 2 'Bordoli, L.' 17 2 'Lepore, R.' 18 2 'Schwede, T.' 19 3 'Studer, G.' 20 3 'Tauriello, G.' 21 3 'Bienert, S.' 22 3 'Biasini, M.' 23 3 'Johner, N.' 24 3 'Schwede, T.' 25 4 'Studer, G.' 26 4 'Rempfer, C.' 27 4 'Waterhouse, A.M.' 28 4 'Gumienny, R.' 29 4 'Haas, J.' 30 4 'Schwede, T.' 31 5 'Biasini, M.' 32 5 'Schmidt, T.' 33 5 'Bienert, S.' 34 5 'Mariani, V.' 35 5 'Studer, G.' 36 5 'Haas, J.' 37 5 'Johner, N.' 38 5 'Schenk, A.D.' 39 5 'Philippsen, A.' 40 5 'Schwede, T.' 41 6 'Camacho, C.' 42 6 'Coulouris, G.' 43 6 'Avagyan, V.' 44 6 'Ma, N.' 45 6 'Papadopoulos, J.' 46 6 'Bealer, K.' 47 6 'Madden, T.L.' 48 7 'Steinegger, M.' 49 7 'Meier, M.' 50 7 'Mirdita, M.' 51 7 'Vohringer, H.' 52 7 'Haunsberger, S.J.' 53 7 'Soding, J.' 54 # # loop_ _software.pdbx_ordinal _software.name _software.classification _software.description _software.version _software.type _software.location _software.citation_id 1 SWISS-MODEL 'model building' 'Homology modelling web service' 2025-06.4 package https://swissmodel.expasy.org 2 2 ProMod3 'model building' 'Modular homology modelling engine' 3.5.0 library https://git.scicore.unibas.ch/schwede/ProMod3 3 3 QMEAN 'model building' 'QMEAN - Qualitative Model Energy ANalysis' 4.4.0 library https://git.scicore.unibas.ch/schwede/QMEAN 4 4 OpenStructure 'data processing' 'Open-Source Computational Structural Biology Framework' 2.10.0 package https://openstructure.org/ 5 5 BLAST 'data collection' . 2.14.1 package https://blast.ncbi.nlm.nih.gov 6 6 HH-suite 'data collection' 'HH-suite3 for sensitive sequence searching' 3.2.0 package https://github.com/soedinglab/hh-suite 7 # # loop_ _ma_software_group.ordinal_id _ma_software_group.group_id _ma_software_group.software_id _ma_software_group.parameter_group_id 1 1 6 . 2 2 1 . 3 2 4 . 4 2 5 . 5 2 6 . 6 3 1 . 7 3 4 . 8 4 1 . 9 4 2 . 10 4 4 . 11 5 3 . 12 6 1 . 13 6 3 . 14 6 4 . # # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Bienert, S.' 1 'Waterhouse, A.' 2 'de Beer, T.A.P.' 3 'Tauriello, G.' 4 'Studer, G.' 5 'Bordoli, L.' 6 'Schwede, T.' 7 # # loop_ _chem_comp.id _chem_comp.type _chem_comp.name _chem_comp.formula _chem_comp.formula_weight _chem_comp.ma_provenance ALA 'L-peptide linking' ALANINE 'C3 H7 N O2' 89.094 'CCD Core' ARG 'L-peptide linking' ARGININE 'C6 H15 N4 O2 1' 175.212 'CCD Core' ASN 'L-peptide linking' ASPARAGINE 'C4 H8 N2 O3' 132.119 'CCD Core' ASP 'L-peptide linking' 'ASPARTIC ACID' 'C4 H7 N O4' 133.103 'CCD Core' CYS 'L-peptide linking' CYSTEINE 'C3 H7 N O2 S' 121.154 'CCD Core' GLN 'L-peptide linking' GLUTAMINE 'C5 H10 N2 O3' 146.146 'CCD Core' GLU 'L-peptide linking' 'GLUTAMIC ACID' 'C5 H9 N O4' 147.130 'CCD Core' GLY 'peptide linking' GLYCINE 'C2 H5 N O2' 75.067 'CCD Core' HIS 'L-peptide linking' HISTIDINE 'C6 H10 N3 O2 1' 156.165 'CCD Core' ILE 'L-peptide linking' ISOLEUCINE 'C6 H13 N O2' 131.175 'CCD Core' LEU 'L-peptide linking' LEUCINE 'C6 H13 N O2' 131.175 'CCD Core' LYS 'L-peptide linking' LYSINE 'C6 H15 N2 O2 1' 147.198 'CCD Core' MET 'L-peptide linking' METHIONINE 'C5 H11 N O2 S' 149.208 'CCD Core' PHE 'L-peptide linking' PHENYLALANINE 'C9 H11 N O2' 165.192 'CCD Core' PRO 'L-peptide linking' PROLINE 'C5 H9 N O2' 115.132 'CCD Core' SER 'L-peptide linking' SERINE 'C3 H7 N O3' 105.093 'CCD Core' THR 'L-peptide linking' THREONINE 'C4 H9 N O3' 119.120 'CCD Core' TYR 'L-peptide linking' TYROSINE 'C9 H11 N O3' 181.191 'CCD Core' VAL 'L-peptide linking' VALINE 'C5 H11 N O2' 117.148 'CCD Core' # # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.details 1 polymer man . 15501.104 1 . # # loop_ _struct_ref.id _struct_ref.entity_id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_align_begin _struct_ref.pdbx_seq_one_letter_code _struct_ref.details 1 1 UNP MMDC_PROMO O54030 1 ;MKNFKVTVNGTEYDVAVEEMGGAAVASAPAARPAAAPAPAAPKPAAAPAPAPAPKTTAAGAGAGANTVTA PMPGTILNVGCHAGDKVSKGDTLVVLEAMKMENEIMAPHDGVVSEVRVQQGASVNAGDILVVLS ; 'Methylmalonyl-CoA decarboxylase subunit gamma' # # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.seq_align_beg _struct_ref_seq.seq_align_end _struct_ref_seq.db_align_beg _struct_ref_seq.db_align_end 1 1 1 134 1 134 # # loop_ _ma_target_ref_db_details.target_entity_id _ma_target_ref_db_details.db_name _ma_target_ref_db_details.db_name_other_details _ma_target_ref_db_details.db_code _ma_target_ref_db_details.db_accession _ma_target_ref_db_details.seq_db_isoform _ma_target_ref_db_details.seq_db_align_begin _ma_target_ref_db_details.seq_db_align_end _ma_target_ref_db_details.ncbi_taxonomy_id _ma_target_ref_db_details.organism_scientific _ma_target_ref_db_details.seq_db_sequence_version_date _ma_target_ref_db_details.seq_db_sequence_checksum _ma_target_ref_db_details.is_primary 1 UNP . MMDC_PROMO O54030 . 1 134 2333 'Propionigenium modestum' 1998-06-01 72CC813187273873 . # # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_strand_id _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can 1 polypeptide(L) no no E ;MKNFKVTVNGTEYDVAVEEMGGAAVASAPAARPAAAPAPAAPKPAAAPAPAPAPKTTAAGAGAGANTVTA PMPGTILNVGCHAGDKVSKGDTLVVLEAMKMENEIMAPHDGVVSEVRVQQGASVNAGDILVVLS ; ;MKNFKVTVNGTEYDVAVEEMGGAAVASAPAARPAAAPAPAAPKPAAAPAPAPAPKTTAAGAGAGANTVTA PMPGTILNVGCHAGDKVSKGDTLVVLEAMKMENEIMAPHDGVVSEVRVQQGASVNAGDILVVLS ; # # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET . 1 2 LYS . 1 3 ASN . 1 4 PHE . 1 5 LYS . 1 6 VAL . 1 7 THR . 1 8 VAL . 1 9 ASN . 1 10 GLY . 1 11 THR . 1 12 GLU . 1 13 TYR . 1 14 ASP . 1 15 VAL . 1 16 ALA . 1 17 VAL . 1 18 GLU . 1 19 GLU . 1 20 MET . 1 21 GLY . 1 22 GLY . 1 23 ALA . 1 24 ALA . 1 25 VAL . 1 26 ALA . 1 27 SER . 1 28 ALA . 1 29 PRO . 1 30 ALA . 1 31 ALA . 1 32 ARG . 1 33 PRO . 1 34 ALA . 1 35 ALA . 1 36 ALA . 1 37 PRO . 1 38 ALA . 1 39 PRO . 1 40 ALA . 1 41 ALA . 1 42 PRO . 1 43 LYS . 1 44 PRO . 1 45 ALA . 1 46 ALA . 1 47 ALA . 1 48 PRO . 1 49 ALA . 1 50 PRO . 1 51 ALA . 1 52 PRO . 1 53 ALA . 1 54 PRO . 1 55 LYS . 1 56 THR . 1 57 THR . 1 58 ALA . 1 59 ALA . 1 60 GLY . 1 61 ALA . 1 62 GLY . 1 63 ALA . 1 64 GLY . 1 65 ALA . 1 66 ASN . 1 67 THR . 1 68 VAL . 1 69 THR . 1 70 ALA . 1 71 PRO . 1 72 MET . 1 73 PRO . 1 74 GLY . 1 75 THR . 1 76 ILE . 1 77 LEU . 1 78 ASN . 1 79 VAL . 1 80 GLY . 1 81 CYS . 1 82 HIS . 1 83 ALA . 1 84 GLY . 1 85 ASP . 1 86 LYS . 1 87 VAL . 1 88 SER . 1 89 LYS . 1 90 GLY . 1 91 ASP . 1 92 THR . 1 93 LEU . 1 94 VAL . 1 95 VAL . 1 96 LEU . 1 97 GLU . 1 98 ALA . 1 99 MET . 1 100 LYS . 1 101 MET . 1 102 GLU . 1 103 ASN . 1 104 GLU . 1 105 ILE . 1 106 MET . 1 107 ALA . 1 108 PRO . 1 109 HIS . 1 110 ASP . 1 111 GLY . 1 112 VAL . 1 113 VAL . 1 114 SER . 1 115 GLU . 1 116 VAL . 1 117 ARG . 1 118 VAL . 1 119 GLN . 1 120 GLN . 1 121 GLY . 1 122 ALA . 1 123 SER . 1 124 VAL . 1 125 ASN . 1 126 ALA . 1 127 GLY . 1 128 ASP . 1 129 ILE . 1 130 LEU . 1 131 VAL . 1 132 VAL . 1 133 LEU . 1 134 SER . # # loop_ _struct_asym.id _struct_asym.entity_id _struct_asym.details A 1 . # # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code A 1 1 MET 1 ? ? ? E . A 1 2 LYS 2 2 LYS LYS E . A 1 3 ASN 3 3 ASN ASN E . A 1 4 PHE 4 4 PHE PHE E . A 1 5 LYS 5 5 LYS LYS E . A 1 6 VAL 6 6 VAL VAL E . A 1 7 THR 7 7 THR THR E . A 1 8 VAL 8 8 VAL VAL E . A 1 9 ASN 9 9 ASN ASN E . A 1 10 GLY 10 10 GLY GLY E . A 1 11 THR 11 11 THR THR E . A 1 12 GLU 12 12 GLU GLU E . A 1 13 TYR 13 13 TYR TYR E . A 1 14 ASP 14 14 ASP ASP E . A 1 15 VAL 15 15 VAL VAL E . A 1 16 ALA 16 16 ALA ALA E . A 1 17 VAL 17 17 VAL VAL E . A 1 18 GLU 18 18 GLU GLU E . A 1 19 GLU 19 19 GLU GLU E . A 1 20 MET 20 ? ? ? E . A 1 21 GLY 21 ? ? ? E . A 1 22 GLY 22 ? ? ? E . A 1 23 ALA 23 ? ? ? E . A 1 24 ALA 24 ? ? ? E . A 1 25 VAL 25 ? ? ? E . A 1 26 ALA 26 ? ? ? E . A 1 27 SER 27 ? ? ? E . A 1 28 ALA 28 ? ? ? E . A 1 29 PRO 29 ? ? ? E . A 1 30 ALA 30 ? ? ? E . A 1 31 ALA 31 ? ? ? E . A 1 32 ARG 32 ? ? ? E . A 1 33 PRO 33 ? ? ? E . A 1 34 ALA 34 ? ? ? E . A 1 35 ALA 35 ? ? ? E . A 1 36 ALA 36 ? ? ? E . A 1 37 PRO 37 ? ? ? E . A 1 38 ALA 38 ? ? ? E . A 1 39 PRO 39 ? ? ? E . A 1 40 ALA 40 ? ? ? E . A 1 41 ALA 41 ? ? ? E . A 1 42 PRO 42 ? ? ? E . A 1 43 LYS 43 ? ? ? E . A 1 44 PRO 44 ? ? ? E . A 1 45 ALA 45 ? ? ? E . A 1 46 ALA 46 ? ? ? E . A 1 47 ALA 47 ? ? ? E . A 1 48 PRO 48 ? ? ? E . A 1 49 ALA 49 ? ? ? E . A 1 50 PRO 50 ? ? ? E . A 1 51 ALA 51 ? ? ? E . A 1 52 PRO 52 ? ? ? E . A 1 53 ALA 53 ? ? ? E . A 1 54 PRO 54 ? ? ? E . A 1 55 LYS 55 ? ? ? E . A 1 56 THR 56 ? ? ? E . A 1 57 THR 57 ? ? ? E . A 1 58 ALA 58 ? ? ? E . A 1 59 ALA 59 ? ? ? E . A 1 60 GLY 60 ? ? ? E . A 1 61 ALA 61 ? ? ? E . A 1 62 GLY 62 ? ? ? E . A 1 63 ALA 63 ? ? ? E . A 1 64 GLY 64 ? ? ? E . A 1 65 ALA 65 ? ? ? E . A 1 66 ASN 66 ? ? ? E . A 1 67 THR 67 ? ? ? E . A 1 68 VAL 68 ? ? ? E . A 1 69 THR 69 ? ? ? E . A 1 70 ALA 70 ? ? ? E . A 1 71 PRO 71 ? ? ? E . A 1 72 MET 72 ? ? ? E . A 1 73 PRO 73 ? ? ? E . A 1 74 GLY 74 ? ? ? E . A 1 75 THR 75 ? ? ? E . A 1 76 ILE 76 ? ? ? E . A 1 77 LEU 77 ? ? ? E . A 1 78 ASN 78 ? ? ? E . A 1 79 VAL 79 ? ? ? E . A 1 80 GLY 80 ? ? ? E . A 1 81 CYS 81 ? ? ? E . A 1 82 HIS 82 ? ? ? E . A 1 83 ALA 83 ? ? ? E . A 1 84 GLY 84 ? ? ? E . A 1 85 ASP 85 ? ? ? E . A 1 86 LYS 86 ? ? ? E . A 1 87 VAL 87 ? ? ? E . A 1 88 SER 88 ? ? ? E . A 1 89 LYS 89 ? ? ? E . A 1 90 GLY 90 ? ? ? E . A 1 91 ASP 91 ? ? ? E . A 1 92 THR 92 ? ? ? E . A 1 93 LEU 93 ? ? ? E . A 1 94 VAL 94 ? ? ? E . A 1 95 VAL 95 ? ? ? E . A 1 96 LEU 96 ? ? ? E . A 1 97 GLU 97 ? ? ? E . A 1 98 ALA 98 ? ? ? E . A 1 99 MET 99 ? ? ? E . A 1 100 LYS 100 ? ? ? E . A 1 101 MET 101 ? ? ? E . A 1 102 GLU 102 ? ? ? E . A 1 103 ASN 103 ? ? ? E . A 1 104 GLU 104 ? ? ? E . A 1 105 ILE 105 ? ? ? E . A 1 106 MET 106 ? ? ? E . A 1 107 ALA 107 ? ? ? E . A 1 108 PRO 108 ? ? ? E . A 1 109 HIS 109 ? ? ? E . A 1 110 ASP 110 ? ? ? E . A 1 111 GLY 111 ? ? ? E . A 1 112 VAL 112 ? ? ? E . A 1 113 VAL 113 ? ? ? E . A 1 114 SER 114 ? ? ? E . A 1 115 GLU 115 ? ? ? E . A 1 116 VAL 116 ? ? ? E . A 1 117 ARG 117 ? ? ? E . A 1 118 VAL 118 ? ? ? E . A 1 119 GLN 119 ? ? ? E . A 1 120 GLN 120 ? ? ? E . A 1 121 GLY 121 ? ? ? E . A 1 122 ALA 122 ? ? ? E . A 1 123 SER 123 ? ? ? E . A 1 124 VAL 124 ? ? ? E . A 1 125 ASN 125 ? ? ? E . A 1 126 ALA 126 ? ? ? E . A 1 127 GLY 127 ? ? ? E . A 1 128 ASP 128 ? ? ? E . A 1 129 ILE 129 ? ? ? E . A 1 130 LEU 130 ? ? ? E . A 1 131 VAL 131 ? ? ? E . A 1 132 VAL 132 ? ? ? E . A 1 133 LEU 133 ? ? ? E . A 1 134 SER 134 ? ? ? E . # # loop_ _ma_data.id _ma_data.name _ma_data.content_type _ma_data.content_type_other_details 1 'Biotin carboxylase {PDB ID=8hz4, label_asym_id=E, auth_asym_id=E, SMTL ID=8hz4.1.E}' 'template structure' . 2 . target . 3 'Target-template alignment by HHblits to 8hz4, label_asym_id=E' 'target-template alignment' . 4 'model 2' 'model coordinates' . 5 SMTL 'reference database' . 6 PDB 'reference database' . 7 'Template search output' other 'Results of the sequence search' # # loop_ _ma_data_group.ordinal_id _ma_data_group.group_id _ma_data_group.data_id 1 1 2 2 1 5 3 1 6 4 2 7 5 3 2 6 3 1 7 3 3 8 4 1 9 4 3 10 5 4 # # loop_ _ma_data_ref_db.data_id _ma_data_ref_db.name _ma_data_ref_db.location_url _ma_data_ref_db.version _ma_data_ref_db.release_date 5 SMTL https://swissmodel.expasy.org/templates/ . 2025-07-23 6 PDB https://www.wwpdb.org . 2025-07-18 # # loop_ _ma_target_entity.entity_id _ma_target_entity.data_id _ma_target_entity.origin 1 2 'reference database' # # loop_ _ma_target_entity_instance.asym_id _ma_target_entity_instance.entity_id _ma_target_entity_instance.details A 1 . # # loop_ _ma_template_trans_matrix.id _ma_template_trans_matrix.rot_matrix[1][1] _ma_template_trans_matrix.rot_matrix[2][1] _ma_template_trans_matrix.rot_matrix[3][1] _ma_template_trans_matrix.rot_matrix[1][2] _ma_template_trans_matrix.rot_matrix[2][2] _ma_template_trans_matrix.rot_matrix[3][2] _ma_template_trans_matrix.rot_matrix[1][3] _ma_template_trans_matrix.rot_matrix[2][3] _ma_template_trans_matrix.rot_matrix[3][3] _ma_template_trans_matrix.tr_vector[1] _ma_template_trans_matrix.tr_vector[2] _ma_template_trans_matrix.tr_vector[3] 1 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0 0 0 # # loop_ _ma_template_details.ordinal_id _ma_template_details.template_id _ma_template_details.template_origin _ma_template_details.template_entity_type _ma_template_details.template_trans_matrix_id _ma_template_details.template_data_id _ma_template_details.target_asym_id _ma_template_details.template_label_asym_id _ma_template_details.template_label_entity_id _ma_template_details.template_model_num _ma_template_details.template_auth_asym_id 1 1 'reference database' polymer 1 1 A E 2 1 E # # loop_ _ma_template_poly.template_id _ma_template_poly.seq_one_letter_code _ma_template_poly.seq_one_letter_code_can 1 ;SAGAEPAPEPRRFTIEVNGRRFGVAVFGDGMNATPVASPSRSAPARRAAPKKTTLAAPVDAVISPIQGRV VAVRVAHGQQVEAGQVLFIVEAMKMENEITAPHSGTIAEVRVEVGTTVEAGAMLATYQNTANNTNGK ; ;SAGAEPAPEPRRFTIEVNGRRFGVAVFGDGMNATPVASPSRSAPARRAAPKKTTLAAPVDAVISPIQGRV VAVRVAHGQQVEAGQVLFIVEAMKMENEITAPHSGTIAEVRVEVGTTVEAGAMLATYQNTANNTNGK ; # # loop_ _ma_template_poly_segment.id _ma_template_poly_segment.template_id _ma_template_poly_segment.residue_number_begin _ma_template_poly_segment.residue_number_end 1 1 11 128 # # loop_ _ma_template_ref_db_details.template_id _ma_template_ref_db_details.db_name _ma_template_ref_db_details.db_name_other_details _ma_template_ref_db_details.db_accession_code _ma_template_ref_db_details.db_version_date 1 PDB . 8hz4 2024-07-24 # # loop_ _ma_target_template_poly_mapping.id _ma_target_template_poly_mapping.template_segment_id _ma_target_template_poly_mapping.target_asym_id _ma_target_template_poly_mapping.target_seq_id_begin _ma_target_template_poly_mapping.target_seq_id_end 1 1 A 1 134 # # loop_ _ma_alignment_info.alignment_id _ma_alignment_info.data_id _ma_alignment_info.software_group_id _ma_alignment_info.alignment_length _ma_alignment_info.alignment_type _ma_alignment_info.alignment_mode 1 3 1 134 'target-template pairwise alignment' local # # loop_ _ma_alignment_details.ordinal_id _ma_alignment_details.alignment_id _ma_alignment_details.template_segment_id _ma_alignment_details.target_asym_id _ma_alignment_details.score_type _ma_alignment_details.score_type_other_details _ma_alignment_details.score_value _ma_alignment_details.percent_sequence_identity _ma_alignment_details.sequence_identity_denominator _ma_alignment_details.sequence_identity_denominator_other_details 1 1 1 A 'HHblits e-value' . 2.6e-19 37.288 'Number of aligned residue pairs (not including the gaps)' . # # loop_ _ma_alignment.ordinal_id _ma_alignment.alignment_id _ma_alignment.target_template_flag _ma_alignment.sequence 1 1 1 MKNFKVTVNGTEYDVAVEEMGGAAVASAPAARPAAAPAPAAPKPAAAPAPAPAPKTTAAGAGAGANTVTAPMPGTILNVGCHAGDKVSKGDTLVVLEAMKMENEIMAPHDGVVSEVRVQQGASVNAGDILVVLS 2 1 2 -RRFTIEVNGRRFGVAVFGDGMNATPVAS------PSRS-AP--AR------RAAPKKTTLAAPVDAVISPIQGRVVAVRVAHGQQVEAGQVLFIVEAMKMENEITAPHSGTIAEVRVEVGTTVEAGAMLATYQ # # loop_ _ma_protocol_step.ordinal_id _ma_protocol_step.protocol_id _ma_protocol_step.step_id _ma_protocol_step.method_type _ma_protocol_step.step_name _ma_protocol_step.details _ma_protocol_step.software_group_id _ma_protocol_step.input_data_group_id _ma_protocol_step.output_data_group_id 1 1 1 'template search' 'template search' 'SWISS-MODEL template search in PDB' 2 1 2 2 1 2 'template selection' 'template selection' 'Automatic template selection by SWISS-MODEL {QSQE=NA}' 3 2 4 3 1 3 modeling 'homology modeling' 'SWISS-MODEL auto-model mode using ProMod3 on 8hz4.1' 4 3 5 # # loop_ _ma_model_list.ordinal_id _ma_model_list.model_name _ma_model_list.data_id _ma_model_list.model_type _ma_model_list.model_type_other_details 1 'model 2' 4 'Homology model' . # # loop_ _ma_model_group.id _ma_model_group.name _ma_model_group.details 1 . . # # loop_ _ma_model_group_link.group_id _ma_model_group_link.model_id 1 1 # # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_alt_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.auth_seq_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.label_entity_id _atom_site.auth_asym_id _atom_site.auth_comp_id _atom_site.B_iso_or_equiv _atom_site.pdbx_PDB_model_num ATOM 1 N N . LYS 2 2 ? A 51.533 -7.642 148.586 1 1 E LYS 0.330 1 ATOM 2 C CA . LYS 2 2 ? A 50.179 -7.479 149.227 1 1 E LYS 0.330 1 ATOM 3 C C . LYS 2 2 ? A 50.344 -7.254 150.709 1 1 E LYS 0.330 1 ATOM 4 O O . LYS 2 2 ? A 50.981 -8.076 151.352 1 1 E LYS 0.330 1 ATOM 5 C CB . LYS 2 2 ? A 49.306 -8.743 148.965 1 1 E LYS 0.330 1 ATOM 6 C CG . LYS 2 2 ? A 48.877 -8.909 147.497 1 1 E LYS 0.330 1 ATOM 7 C CD . LYS 2 2 ? A 48.021 -10.170 147.272 1 1 E LYS 0.330 1 ATOM 8 C CE . LYS 2 2 ? A 47.619 -10.360 145.802 1 1 E LYS 0.330 1 ATOM 9 N NZ . LYS 2 2 ? A 46.870 -11.624 145.625 1 1 E LYS 0.330 1 ATOM 10 N N . ASN 3 3 ? A 49.827 -6.134 151.265 1 1 E ASN 0.420 1 ATOM 11 C CA . ASN 3 3 ? A 50.110 -5.746 152.633 1 1 E ASN 0.420 1 ATOM 12 C C . ASN 3 3 ? A 48.830 -5.872 153.419 1 1 E ASN 0.420 1 ATOM 13 O O . ASN 3 3 ? A 47.787 -5.387 152.978 1 1 E ASN 0.420 1 ATOM 14 C CB . ASN 3 3 ? A 50.605 -4.282 152.717 1 1 E ASN 0.420 1 ATOM 15 C CG . ASN 3 3 ? A 51.913 -4.190 151.940 1 1 E ASN 0.420 1 ATOM 16 O OD1 . ASN 3 3 ? A 52.728 -5.089 151.914 1 1 E ASN 0.420 1 ATOM 17 N ND2 . ASN 3 3 ? A 52.104 -3.059 151.209 1 1 E ASN 0.420 1 ATOM 18 N N . PHE 4 4 ? A 48.882 -6.544 154.578 1 1 E PHE 0.530 1 ATOM 19 C CA . PHE 4 4 ? A 47.729 -6.807 155.410 1 1 E PHE 0.530 1 ATOM 20 C C . PHE 4 4 ? A 48.109 -6.525 156.840 1 1 E PHE 0.530 1 ATOM 21 O O . PHE 4 4 ? A 49.249 -6.726 157.256 1 1 E PHE 0.530 1 ATOM 22 C CB . PHE 4 4 ? A 47.246 -8.287 155.381 1 1 E PHE 0.530 1 ATOM 23 C CG . PHE 4 4 ? A 47.021 -8.774 153.977 1 1 E PHE 0.530 1 ATOM 24 C CD1 . PHE 4 4 ? A 45.917 -8.340 153.225 1 1 E PHE 0.530 1 ATOM 25 C CD2 . PHE 4 4 ? A 47.911 -9.698 153.404 1 1 E PHE 0.530 1 ATOM 26 C CE1 . PHE 4 4 ? A 45.689 -8.843 151.937 1 1 E PHE 0.530 1 ATOM 27 C CE2 . PHE 4 4 ? A 47.686 -10.206 152.119 1 1 E PHE 0.530 1 ATOM 28 C CZ . PHE 4 4 ? A 46.568 -9.785 151.388 1 1 E PHE 0.530 1 ATOM 29 N N . LYS 5 5 ? A 47.139 -6.093 157.656 1 1 E LYS 0.600 1 ATOM 30 C CA . LYS 5 5 ? A 47.348 -5.929 159.072 1 1 E LYS 0.600 1 ATOM 31 C C . LYS 5 5 ? A 46.620 -7.053 159.770 1 1 E LYS 0.600 1 ATOM 32 O O . LYS 5 5 ? A 45.409 -7.219 159.616 1 1 E LYS 0.600 1 ATOM 33 C CB . LYS 5 5 ? A 46.836 -4.555 159.550 1 1 E LYS 0.600 1 ATOM 34 C CG . LYS 5 5 ? A 47.075 -4.309 161.044 1 1 E LYS 0.600 1 ATOM 35 C CD . LYS 5 5 ? A 46.624 -2.906 161.471 1 1 E LYS 0.600 1 ATOM 36 C CE . LYS 5 5 ? A 46.837 -2.695 162.962 1 1 E LYS 0.600 1 ATOM 37 N NZ . LYS 5 5 ? A 46.399 -1.365 163.444 1 1 E LYS 0.600 1 ATOM 38 N N . VAL 6 6 ? A 47.353 -7.879 160.531 1 1 E VAL 0.620 1 ATOM 39 C CA . VAL 6 6 ? A 46.817 -9.081 161.140 1 1 E VAL 0.620 1 ATOM 40 C C . VAL 6 6 ? A 46.893 -8.915 162.636 1 1 E VAL 0.620 1 ATOM 41 O O . VAL 6 6 ? A 47.937 -8.577 163.191 1 1 E VAL 0.620 1 ATOM 42 C CB . VAL 6 6 ? A 47.584 -10.338 160.727 1 1 E VAL 0.620 1 ATOM 43 C CG1 . VAL 6 6 ? A 47.003 -11.596 161.414 1 1 E VAL 0.620 1 ATOM 44 C CG2 . VAL 6 6 ? A 47.491 -10.496 159.195 1 1 E VAL 0.620 1 ATOM 45 N N . THR 7 7 ? A 45.771 -9.156 163.335 1 1 E THR 0.630 1 ATOM 46 C CA . THR 7 7 ? A 45.718 -9.097 164.787 1 1 E THR 0.630 1 ATOM 47 C C . THR 7 7 ? A 45.573 -10.501 165.303 1 1 E THR 0.630 1 ATOM 48 O O . THR 7 7 ? A 44.542 -11.142 165.109 1 1 E THR 0.630 1 ATOM 49 C CB . THR 7 7 ? A 44.560 -8.268 165.321 1 1 E THR 0.630 1 ATOM 50 O OG1 . THR 7 7 ? A 44.729 -6.920 164.916 1 1 E THR 0.630 1 ATOM 51 C CG2 . THR 7 7 ? A 44.539 -8.250 166.857 1 1 E THR 0.630 1 ATOM 52 N N . VAL 8 8 ? A 46.603 -11.029 165.989 1 1 E VAL 0.610 1 ATOM 53 C CA . VAL 8 8 ? A 46.602 -12.398 166.488 1 1 E VAL 0.610 1 ATOM 54 C C . VAL 8 8 ? A 46.579 -12.312 167.994 1 1 E VAL 0.610 1 ATOM 55 O O . VAL 8 8 ? A 47.545 -11.849 168.595 1 1 E VAL 0.610 1 ATOM 56 C CB . VAL 8 8 ? A 47.850 -13.189 166.092 1 1 E VAL 0.610 1 ATOM 57 C CG1 . VAL 8 8 ? A 47.692 -14.668 166.517 1 1 E VAL 0.610 1 ATOM 58 C CG2 . VAL 8 8 ? A 48.068 -13.081 164.572 1 1 E VAL 0.610 1 ATOM 59 N N . ASN 9 9 ? A 45.465 -12.704 168.656 1 1 E ASN 0.460 1 ATOM 60 C CA . ASN 9 9 ? A 45.295 -12.614 170.105 1 1 E ASN 0.460 1 ATOM 61 C C . ASN 9 9 ? A 45.547 -11.221 170.697 1 1 E ASN 0.460 1 ATOM 62 O O . ASN 9 9 ? A 46.104 -11.070 171.773 1 1 E ASN 0.460 1 ATOM 63 C CB . ASN 9 9 ? A 46.128 -13.697 170.855 1 1 E ASN 0.460 1 ATOM 64 C CG . ASN 9 9 ? A 45.525 -15.073 170.594 1 1 E ASN 0.460 1 ATOM 65 O OD1 . ASN 9 9 ? A 44.357 -15.221 170.280 1 1 E ASN 0.460 1 ATOM 66 N ND2 . ASN 9 9 ? A 46.361 -16.131 170.760 1 1 E ASN 0.460 1 ATOM 67 N N . GLY 10 10 ? A 45.088 -10.160 169.988 1 1 E GLY 0.650 1 ATOM 68 C CA . GLY 10 10 ? A 45.282 -8.771 170.401 1 1 E GLY 0.650 1 ATOM 69 C C . GLY 10 10 ? A 46.604 -8.150 170.028 1 1 E GLY 0.650 1 ATOM 70 O O . GLY 10 10 ? A 46.855 -7.002 170.358 1 1 E GLY 0.650 1 ATOM 71 N N . THR 11 11 ? A 47.474 -8.868 169.291 1 1 E THR 0.640 1 ATOM 72 C CA . THR 11 11 ? A 48.783 -8.338 168.919 1 1 E THR 0.640 1 ATOM 73 C C . THR 11 11 ? A 48.760 -7.945 167.467 1 1 E THR 0.640 1 ATOM 74 O O . THR 11 11 ? A 48.581 -8.795 166.593 1 1 E THR 0.640 1 ATOM 75 C CB . THR 11 11 ? A 49.904 -9.344 169.111 1 1 E THR 0.640 1 ATOM 76 O OG1 . THR 11 11 ? A 49.946 -9.744 170.469 1 1 E THR 0.640 1 ATOM 77 C CG2 . THR 11 11 ? A 51.280 -8.725 168.834 1 1 E THR 0.640 1 ATOM 78 N N . GLU 12 12 ? A 48.911 -6.633 167.180 1 1 E GLU 0.640 1 ATOM 79 C CA . GLU 12 12 ? A 48.917 -6.070 165.843 1 1 E GLU 0.640 1 ATOM 80 C C . GLU 12 12 ? A 50.226 -6.327 165.103 1 1 E GLU 0.640 1 ATOM 81 O O . GLU 12 12 ? A 51.313 -6.038 165.603 1 1 E GLU 0.640 1 ATOM 82 C CB . GLU 12 12 ? A 48.657 -4.534 165.859 1 1 E GLU 0.640 1 ATOM 83 C CG . GLU 12 12 ? A 47.255 -4.124 166.391 1 1 E GLU 0.640 1 ATOM 84 C CD . GLU 12 12 ? A 46.907 -2.658 166.164 1 1 E GLU 0.640 1 ATOM 85 O OE1 . GLU 12 12 ? A 47.749 -1.907 165.607 1 1 E GLU 0.640 1 ATOM 86 O OE2 . GLU 12 12 ? A 45.731 -2.279 166.392 1 1 E GLU 0.640 1 ATOM 87 N N . TYR 13 13 ? A 50.148 -6.869 163.875 1 1 E TYR 0.570 1 ATOM 88 C CA . TYR 13 13 ? A 51.298 -7.146 163.041 1 1 E TYR 0.570 1 ATOM 89 C C . TYR 13 13 ? A 51.066 -6.610 161.643 1 1 E TYR 0.570 1 ATOM 90 O O . TYR 13 13 ? A 49.960 -6.695 161.108 1 1 E TYR 0.570 1 ATOM 91 C CB . TYR 13 13 ? A 51.537 -8.674 162.927 1 1 E TYR 0.570 1 ATOM 92 C CG . TYR 13 13 ? A 52.085 -9.231 164.209 1 1 E TYR 0.570 1 ATOM 93 C CD1 . TYR 13 13 ? A 53.380 -8.885 164.626 1 1 E TYR 0.570 1 ATOM 94 C CD2 . TYR 13 13 ? A 51.337 -10.133 164.985 1 1 E TYR 0.570 1 ATOM 95 C CE1 . TYR 13 13 ? A 53.930 -9.450 165.785 1 1 E TYR 0.570 1 ATOM 96 C CE2 . TYR 13 13 ? A 51.893 -10.715 166.134 1 1 E TYR 0.570 1 ATOM 97 C CZ . TYR 13 13 ? A 53.194 -10.375 166.528 1 1 E TYR 0.570 1 ATOM 98 O OH . TYR 13 13 ? A 53.768 -10.939 167.685 1 1 E TYR 0.570 1 ATOM 99 N N . ASP 14 14 ? A 52.131 -6.060 161.022 1 1 E ASP 0.600 1 ATOM 100 C CA . ASP 14 14 ? A 52.174 -5.628 159.643 1 1 E ASP 0.600 1 ATOM 101 C C . ASP 14 14 ? A 52.780 -6.792 158.864 1 1 E ASP 0.600 1 ATOM 102 O O . ASP 14 14 ? A 53.834 -7.324 159.215 1 1 E ASP 0.600 1 ATOM 103 C CB . ASP 14 14 ? A 52.983 -4.297 159.543 1 1 E ASP 0.600 1 ATOM 104 C CG . ASP 14 14 ? A 52.908 -3.628 158.177 1 1 E ASP 0.600 1 ATOM 105 O OD1 . ASP 14 14 ? A 52.401 -4.258 157.219 1 1 E ASP 0.600 1 ATOM 106 O OD2 . ASP 14 14 ? A 53.346 -2.451 158.102 1 1 E ASP 0.600 1 ATOM 107 N N . VAL 15 15 ? A 52.059 -7.272 157.837 1 1 E VAL 0.560 1 ATOM 108 C CA . VAL 15 15 ? A 52.438 -8.418 157.045 1 1 E VAL 0.560 1 ATOM 109 C C . VAL 15 15 ? A 52.475 -8.021 155.591 1 1 E VAL 0.560 1 ATOM 110 O O . VAL 15 15 ? A 51.495 -7.530 155.037 1 1 E VAL 0.560 1 ATOM 111 C CB . VAL 15 15 ? A 51.451 -9.576 157.173 1 1 E VAL 0.560 1 ATOM 112 C CG1 . VAL 15 15 ? A 51.980 -10.802 156.391 1 1 E VAL 0.560 1 ATOM 113 C CG2 . VAL 15 15 ? A 51.266 -9.925 158.664 1 1 E VAL 0.560 1 ATOM 114 N N . ALA 16 16 ? A 53.600 -8.301 154.912 1 1 E ALA 0.540 1 ATOM 115 C CA . ALA 16 16 ? A 53.737 -8.110 153.496 1 1 E ALA 0.540 1 ATOM 116 C C . ALA 16 16 ? A 53.969 -9.472 152.880 1 1 E ALA 0.540 1 ATOM 117 O O . ALA 16 16 ? A 54.861 -10.221 153.279 1 1 E ALA 0.540 1 ATOM 118 C CB . ALA 16 16 ? A 54.906 -7.153 153.182 1 1 E ALA 0.540 1 ATOM 119 N N . VAL 17 17 ? A 53.131 -9.838 151.899 1 1 E VAL 0.450 1 ATOM 120 C CA . VAL 17 17 ? A 53.221 -11.091 151.178 1 1 E VAL 0.450 1 ATOM 121 C C . VAL 17 17 ? A 53.621 -10.741 149.766 1 1 E VAL 0.450 1 ATOM 122 O O . VAL 17 17 ? A 53.064 -9.815 149.155 1 1 E VAL 0.450 1 ATOM 123 C CB . VAL 17 17 ? A 51.900 -11.863 151.177 1 1 E VAL 0.450 1 ATOM 124 C CG1 . VAL 17 17 ? A 52.057 -13.243 150.495 1 1 E VAL 0.450 1 ATOM 125 C CG2 . VAL 17 17 ? A 51.432 -12.046 152.638 1 1 E VAL 0.450 1 ATOM 126 N N . GLU 18 18 ? A 54.619 -11.466 149.241 1 1 E GLU 0.190 1 ATOM 127 C CA . GLU 18 18 ? A 55.201 -11.326 147.937 1 1 E GLU 0.190 1 ATOM 128 C C . GLU 18 18 ? A 54.872 -12.630 147.236 1 1 E GLU 0.190 1 ATOM 129 O O . GLU 18 18 ? A 55.035 -13.677 147.843 1 1 E GLU 0.190 1 ATOM 130 C CB . GLU 18 18 ? A 56.742 -11.173 148.045 1 1 E GLU 0.190 1 ATOM 131 C CG . GLU 18 18 ? A 57.458 -10.951 146.689 1 1 E GLU 0.190 1 ATOM 132 C CD . GLU 18 18 ? A 58.950 -10.647 146.836 1 1 E GLU 0.190 1 ATOM 133 O OE1 . GLU 18 18 ? A 59.451 -10.596 147.988 1 1 E GLU 0.190 1 ATOM 134 O OE2 . GLU 18 18 ? A 59.588 -10.424 145.775 1 1 E GLU 0.190 1 ATOM 135 N N . GLU 19 19 ? A 54.344 -12.515 145.993 1 1 E GLU 0.150 1 ATOM 136 C CA . GLU 19 19 ? A 53.950 -13.593 145.101 1 1 E GLU 0.150 1 ATOM 137 C C . GLU 19 19 ? A 52.437 -13.968 145.313 1 1 E GLU 0.150 1 ATOM 138 O O . GLU 19 19 ? A 51.784 -13.413 146.250 1 1 E GLU 0.150 1 ATOM 139 C CB . GLU 19 19 ? A 55.076 -14.685 144.973 1 1 E GLU 0.150 1 ATOM 140 C CG . GLU 19 19 ? A 54.990 -15.764 143.853 1 1 E GLU 0.150 1 ATOM 141 C CD . GLU 19 19 ? A 56.164 -16.757 143.890 1 1 E GLU 0.150 1 ATOM 142 O OE1 . GLU 19 19 ? A 57.109 -16.565 144.698 1 1 E GLU 0.150 1 ATOM 143 O OE2 . GLU 19 19 ? A 56.134 -17.722 143.078 1 1 E GLU 0.150 1 ATOM 144 O OXT . GLU 19 19 ? A 51.871 -14.681 144.443 1 1 E GLU 0.150 1 # # loop_ _atom_type.symbol C N O # # loop_ _ma_qa_metric.id _ma_qa_metric.name _ma_qa_metric.description _ma_qa_metric.type _ma_qa_metric.mode _ma_qa_metric.type_other_details _ma_qa_metric.software_group_id 1 QMEANDisCo 'Predicted accuracy according to all-atom lDDT in [0,1].' 'pLDDT all-atom in [0,1]' local . 5 2 QMEANDisCo 'Predicted accuracy according to all-atom lDDT in [0,1].' 'pLDDT all-atom in [0,1]' global . 5 3 GMQE 'Global Model Quality Estimate of the model accuracy, calculated by SWISS-MODEL.' 'normalized score' global . 6 # # loop_ _ma_qa_metric_global.ordinal_id _ma_qa_metric_global.model_id _ma_qa_metric_global.metric_id _ma_qa_metric_global.metric_value 1 1 2 0.511 2 1 3 0.065 # # loop_ _ma_qa_metric_local.ordinal_id _ma_qa_metric_local.model_id _ma_qa_metric_local.label_asym_id _ma_qa_metric_local.label_seq_id _ma_qa_metric_local.label_comp_id _ma_qa_metric_local.metric_id _ma_qa_metric_local.metric_value 1 1 A 2 LYS 1 0.330 2 1 A 3 ASN 1 0.420 3 1 A 4 PHE 1 0.530 4 1 A 5 LYS 1 0.600 5 1 A 6 VAL 1 0.620 6 1 A 7 THR 1 0.630 7 1 A 8 VAL 1 0.610 8 1 A 9 ASN 1 0.460 9 1 A 10 GLY 1 0.650 10 1 A 11 THR 1 0.640 11 1 A 12 GLU 1 0.640 12 1 A 13 TYR 1 0.570 13 1 A 14 ASP 1 0.600 14 1 A 15 VAL 1 0.560 15 1 A 16 ALA 1 0.540 16 1 A 17 VAL 1 0.450 17 1 A 18 GLU 1 0.190 18 1 A 19 GLU 1 0.150 # # loop_ _pdbx_data_usage.id _pdbx_data_usage.type _pdbx_data_usage.details _pdbx_data_usage.url 1 license ;This SWISS-MODEL protein model is copyright. 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