data_SMR-d4a0fbd9bbf7f4303f552904ae311cbb_1
_entry.id SMR-d4a0fbd9bbf7f4303f552904ae311cbb_1
_struct.entry_id SMR-d4a0fbd9bbf7f4303f552904ae311cbb_1
_struct.pdbx_model_details
;This model was generated unsupervised by the SWISS-MODEL homology-modelling pipeline for the SWISS-MODEL Repository, a database of annotated 3D protein structure models. The modelled monomer covers following UniProtKB entries:

  - P84563/ PSAD_POPEU, Photosystem I reaction center subunit II

Estimated model accuracy of this model is 0.641, calculated by SWISS-MODEL as Global Model Quality Estimate (GMQE).
;
_struct.pdbx_structure_determination_methodology computational
_struct.title 'Model for UniProtKB entries P84563'
_audit_conform.dict_location https://raw.githubusercontent.com/ihmwg/ModelCIF/80e1e22/dist/mmcif_ma.dic
_audit_conform.dict_name mmcif_ma.dic
_audit_conform.dict_version 1.4.7
#
loop_
_citation.id
_citation.title
_citation.journal_abbrev
_citation.journal_volume
_citation.page_first
_citation.page_last
_citation.year
_citation.pdbx_database_id_PubMed
_citation.pdbx_database_id_DOI
primary 'The SWISS-MODEL Repository - new features and functionality'
'Nucleic Acids Res.' 45 D313 D319 2017 27899672 10.1093/nar/gkw1132
2 'SWISS-MODEL: homology modelling of protein structures and complexes'
'Nucleic Acids Res.' 46 W296 W303 2018 29788355 10.1093/nar/gky427
3 'ProMod3 - A versatile homology modelling toolbox' 'PLoS Comput. Biol.' 17(1)
1 18 2021 33507980 10.1371/journal.pcbi.1008667
4 'QMEANDisCo - distance constraints applied on model quality estimation'
Bioinformatics 36 1765 1771 2020 31697312 10.1093/bioinformatics/btz828
5
'OpenStructure: an integrated software framework for computational structural biology'
'Acta Crystallogr., Sect. D: Biol. Crystallogr.' 69 701 709 2013 23633579
10.1107/S0907444913007051
6 'BLAST+: architecture and applications' 'BMC Bioinf.' 10 421 . 2009 20003500
10.1186/1471-2105-10-421
7 'HH-suite3 for fast remote homology detection and deep protein annotation'
'BMC Bioinf.' 20 473 . 2019 31521110 10.1186/s12859-019-3019-7
#
#
loop_
_citation_author.citation_id
_citation_author.name
_citation_author.ordinal
primary 'Bienert, S.' 1
primary 'Waterhouse, A.' 2
primary 'de Beer, T.A.P.' 3
primary 'Tauriello, G.' 4
primary 'Studer, G.' 5
primary 'Bordoli, L.' 6
primary 'Schwede, T.' 7
2 'Waterhouse, A.' 8
2 'Bertoni, M.' 9
2 'Bienert, S.' 10
2 'Studer, G.' 11
2 'Tauriello, G.' 12
2 'Gumienny, R.' 13
2 'Heer, F.T.' 14
2 'de Beer, T.A.P.' 15
2 'Rempfer, C.' 16
2 'Bordoli, L.' 17
2 'Lepore, R.' 18
2 'Schwede, T.' 19
3 'Studer, G.' 20
3 'Tauriello, G.' 21
3 'Bienert, S.' 22
3 'Biasini, M.' 23
3 'Johner, N.' 24
3 'Schwede, T.' 25
4 'Studer, G.' 26
4 'Rempfer, C.' 27
4 'Waterhouse, A.M.' 28
4 'Gumienny, R.' 29
4 'Haas, J.' 30
4 'Schwede, T.' 31
5 'Biasini, M.' 32
5 'Schmidt, T.' 33
5 'Bienert, S.' 34
5 'Mariani, V.' 35
5 'Studer, G.' 36
5 'Haas, J.' 37
5 'Johner, N.' 38
5 'Schenk, A.D.' 39
5 'Philippsen, A.' 40
5 'Schwede, T.' 41
6 'Camacho, C.' 42
6 'Coulouris, G.' 43
6 'Avagyan, V.' 44
6 'Ma, N.' 45
6 'Papadopoulos, J.' 46
6 'Bealer, K.' 47
6 'Madden, T.L.' 48
7 'Steinegger, M.' 49
7 'Meier, M.' 50
7 'Mirdita, M.' 51
7 'Vohringer, H.' 52
7 'Haunsberger, S.J.' 53
7 'Soding, J.' 54
#
#
loop_
_software.pdbx_ordinal
_software.name
_software.classification
_software.description
_software.version
_software.type
_software.location
_software.citation_id
1 SWISS-MODEL 'model building' 'Homology modelling web service' 2025-08.5
package https://swissmodel.expasy.org 2
2 ProMod3 'model building' 'Modular homology modelling engine' 3.6.0 library
https://git.scicore.unibas.ch/schwede/ProMod3 3
3 QMEAN 'model building' 'QMEAN - Qualitative Model Energy ANalysis' 4.5.0
library https://git.scicore.unibas.ch/schwede/QMEAN 4
4 OpenStructure 'data processing'
'Open-Source Computational Structural Biology Framework' 2.11.1 package
https://openstructure.org/ 5
5 BLAST 'data collection' . 2.14.1 package https://blast.ncbi.nlm.nih.gov 6
6 HH-suite 'data collection' 'HH-suite3 for sensitive sequence searching' 3.2.0
package https://github.com/soedinglab/hh-suite 7
#
#
loop_
_ma_software_group.ordinal_id
_ma_software_group.group_id
_ma_software_group.software_id
_ma_software_group.parameter_group_id
1 1 6 .
2 2 1 .
3 2 4 .
4 2 5 .
5 2 6 .
6 3 1 .
7 3 4 .
8 4 1 .
9 4 2 .
10 4 4 .
11 5 3 .
12 6 1 .
13 6 3 .
14 6 4 .
#
#
loop_
_audit_author.name
_audit_author.pdbx_ordinal
'Bienert, S.' 1
'Waterhouse, A.' 2
'de Beer, T.A.P.' 3
'Tauriello, G.' 4
'Studer, G.' 5
'Bordoli, L.' 6
'Schwede, T.' 7
#
#
loop_
_pdbx_data_usage.id
_pdbx_data_usage.type
_pdbx_data_usage.details
_pdbx_data_usage.url
_pdbx_data_usage.name
1 license
;This SWISS-MODEL protein model is copyright.
It is produced by the SWISS-MODEL server, developed by the Computational
Structural Biology Group at the SIB Swiss Institute of Bioinformatics at the
Biozentrum, University of Basel (https://swissmodel.expasy.org). This
model is licensed under the CC BY-SA 4.0 Creative Commons
Attribution-ShareAlike 4.0 International License
(https://creativecommons.org/licenses/by-sa/4.0/legalcode), i.e. you
can copy and redistribute the model in any medium or format,
transform and build upon the model for any purpose, even
commercially, under the following terms:
Attribution - You must give appropriate credit, provide a link to
the license, and indicate if changes were made. You may do so in any
reasonable manner, but not in any way that suggests the licensor
endorses you or your use. When you publish, patent or distribute
results that were fully or partially based on the model, please cite
the corresponding papers mentioned under JRNL.
ShareAlike - If you remix, transform, or build upon the material,
you must distribute your contributions under the same license as the
original.
No additional restrictions - you may not apply legal terms or
technological measures that legally restrict others from doing
anything the license permits.
Find a human-readable summary of (and not a substitute for) the
CC BY-SA 4.0 license at this link:
https://creativecommons.org/licenses/by-sa/4.0/
;
https://creativecommons.org/licenses/by-sa/4.0/legalcode
'Attribution-ShareAlike 4.0 International'
2 disclaimer
;The SWISS-MODEL SERVER produces theoretical models for
proteins. The results of any theoretical modelling procedure is
NON-EXPERIMENTAL and MUST be considered with care. These models may
contain significant errors. This is especially true for automated
modeling since there is no human intervention during model
building. Please read the header section and the logfile carefully
to know what templates and alignments were used during the model
building process. All information by the SWISS-MODEL SERVER is
provided "AS-IS", without any warranty, expressed or implied.
;
https://swissmodel.expasy.org/docs/terms_of_use#disclaimer .
#
#
loop_
_chem_comp.id
_chem_comp.type
_chem_comp.name
_chem_comp.formula
_chem_comp.formula_weight
_chem_comp.ma_provenance
ALA 'L-peptide linking' ALANINE 'C3 H7 N O2' 89.094 'CCD Core'
ARG 'L-peptide linking' ARGININE 'C6 H15 N4 O2 1' 175.212 'CCD Core'
ASN 'L-peptide linking' ASPARAGINE 'C4 H8 N2 O3' 132.119 'CCD Core'
ASP 'L-peptide linking' 'ASPARTIC ACID' 'C4 H7 N O4' 133.103 'CCD Core'
CYS 'L-peptide linking' CYSTEINE 'C3 H7 N O2 S' 121.154 'CCD Core'
GLN 'L-peptide linking' GLUTAMINE 'C5 H10 N2 O3' 146.146 'CCD Core'
GLU 'L-peptide linking' 'GLUTAMIC ACID' 'C5 H9 N O4' 147.130 'CCD Core'
GLY 'peptide linking' GLYCINE 'C2 H5 N O2' 75.067 'CCD Core'
HIS 'L-peptide linking' HISTIDINE 'C6 H10 N3 O2 1' 156.165 'CCD Core'
ILE 'L-peptide linking' ISOLEUCINE 'C6 H13 N O2' 131.175 'CCD Core'
LEU 'L-peptide linking' LEUCINE 'C6 H13 N O2' 131.175 'CCD Core'
LYS 'L-peptide linking' LYSINE 'C6 H15 N2 O2 1' 147.198 'CCD Core'
MET 'L-peptide linking' METHIONINE 'C5 H11 N O2 S' 149.208 'CCD Core'
PHE 'L-peptide linking' PHENYLALANINE 'C9 H11 N O2' 165.192 'CCD Core'
PRO 'L-peptide linking' PROLINE 'C5 H9 N O2' 115.132 'CCD Core'
SER 'L-peptide linking' SERINE 'C3 H7 N O3' 105.093 'CCD Core'
THR 'L-peptide linking' THREONINE 'C4 H9 N O3' 119.120 'CCD Core'
TRP 'L-peptide linking' TRYPTOPHAN 'C11 H12 N2 O2' 204.229 'CCD Core'
TYR 'L-peptide linking' TYROSINE 'C9 H11 N O3' 181.191 'CCD Core'
VAL 'L-peptide linking' VALINE 'C5 H11 N O2' 117.148 'CCD Core'
#
#
loop_
_entity.id
_entity.type
_entity.src_method
_entity.pdbx_description
_entity.formula_weight
_entity.pdbx_number_of_molecules
_entity.details
1 polymer man . 3402.667 1 .
#
#
loop_
_struct_ref.id
_struct_ref.entity_id
_struct_ref.db_name
_struct_ref.db_code
_struct_ref.pdbx_db_accession
_struct_ref.pdbx_align_begin
_struct_ref.pdbx_seq_one_letter_code
_struct_ref.details
1 1 UNP PSAD_POPEU P84563 1 EAPVGFTPPELDPSTPSPIFGGSTGGLLR
'Photosystem I reaction center subunit II'
#
#
loop_
_struct_ref_seq.align_id
_struct_ref_seq.ref_id
_struct_ref_seq.seq_align_beg
_struct_ref_seq.seq_align_end
_struct_ref_seq.db_align_beg
_struct_ref_seq.db_align_end
1 1 1 29 1 29
#
#
loop_
_ma_target_ref_db_details.target_entity_id
_ma_target_ref_db_details.db_name
_ma_target_ref_db_details.db_name_other_details
_ma_target_ref_db_details.db_code
_ma_target_ref_db_details.db_accession
_ma_target_ref_db_details.seq_db_isoform
_ma_target_ref_db_details.seq_db_align_begin
_ma_target_ref_db_details.seq_db_align_end
_ma_target_ref_db_details.ncbi_taxonomy_id
_ma_target_ref_db_details.organism_scientific
_ma_target_ref_db_details.seq_db_sequence_version_date
_ma_target_ref_db_details.seq_db_sequence_checksum
_ma_target_ref_db_details.is_primary
1 UNP . PSAD_POPEU P84563 . 1 29 75702 'Populus euphratica (Euphrates poplar)'
2005-07-05 06416AEC6A4EF78E .
#
#
loop_
_entity_poly.entity_id
_entity_poly.type
_entity_poly.nstd_linkage
_entity_poly.nstd_monomer
_entity_poly.pdbx_strand_id
_entity_poly.pdbx_seq_one_letter_code
_entity_poly.pdbx_seq_one_letter_code_can
1 polypeptide(L) no no D EAPVGFTPPELDPSTPSPIFGGSTGGLLR
EAPVGFTPPELDPSTPSPIFGGSTGGLLR
#
#
loop_
_entity_poly_seq.entity_id
_entity_poly_seq.num
_entity_poly_seq.mon_id
_entity_poly_seq.hetero
1 1 GLU .
1 2 ALA .
1 3 PRO .
1 4 VAL .
1 5 GLY .
1 6 PHE .
1 7 THR .
1 8 PRO .
1 9 PRO .
1 10 GLU .
1 11 LEU .
1 12 ASP .
1 13 PRO .
1 14 SER .
1 15 THR .
1 16 PRO .
1 17 SER .
1 18 PRO .
1 19 ILE .
1 20 PHE .
1 21 GLY .
1 22 GLY .
1 23 SER .
1 24 THR .
1 25 GLY .
1 26 GLY .
1 27 LEU .
1 28 LEU .
1 29 ARG .
#
#
loop_
_struct_asym.id
_struct_asym.entity_id
_struct_asym.details
A 1 .
#
#
loop_
_pdbx_poly_seq_scheme.asym_id
_pdbx_poly_seq_scheme.entity_id
_pdbx_poly_seq_scheme.seq_id
_pdbx_poly_seq_scheme.mon_id
_pdbx_poly_seq_scheme.pdb_seq_num
_pdbx_poly_seq_scheme.auth_seq_num
_pdbx_poly_seq_scheme.pdb_mon_id
_pdbx_poly_seq_scheme.auth_mon_id
_pdbx_poly_seq_scheme.pdb_strand_id
_pdbx_poly_seq_scheme.pdb_ins_code
A 1 1 GLU 1 ? ? ? D .
A 1 2 ALA 2 ? ? ? D .
A 1 3 PRO 3 ? ? ? D .
A 1 4 VAL 4 ? ? ? D .
A 1 5 GLY 5 5 GLY GLY D .
A 1 6 PHE 6 6 PHE PHE D .
A 1 7 THR 7 7 THR THR D .
A 1 8 PRO 8 8 PRO PRO D .
A 1 9 PRO 9 9 PRO PRO D .
A 1 10 GLU 10 10 GLU GLU D .
A 1 11 LEU 11 11 LEU LEU D .
A 1 12 ASP 12 12 ASP ASP D .
A 1 13 PRO 13 13 PRO PRO D .
A 1 14 SER 14 14 SER SER D .
A 1 15 THR 15 15 THR THR D .
A 1 16 PRO 16 16 PRO PRO D .
A 1 17 SER 17 17 SER SER D .
A 1 18 PRO 18 18 PRO PRO D .
A 1 19 ILE 19 19 ILE ILE D .
A 1 20 PHE 20 20 PHE PHE D .
A 1 21 GLY 21 21 GLY GLY D .
A 1 22 GLY 22 22 GLY GLY D .
A 1 23 SER 23 23 SER SER D .
A 1 24 THR 24 24 THR THR D .
A 1 25 GLY 25 25 GLY GLY D .
A 1 26 GLY 26 26 GLY GLY D .
A 1 27 LEU 27 27 LEU LEU D .
A 1 28 LEU 28 28 LEU LEU D .
A 1 29 ARG 29 29 ARG ARG D .
#
#
loop_
_ma_data.id
_ma_data.name
_ma_data.content_type
_ma_data.content_type_other_details
1
'Photosystem I reaction center subunit II {PDB ID=8bcv, label_asym_id=D, auth_asym_id=D, SMTL ID=8bcv.1.D}'
'template structure' .
2 . target .
3 'Target-template alignment by HHblits to 8bcv, label_asym_id=D'
'target-template alignment' .
4 'model 1' 'model coordinates' .
5 SMTL 'reference database' .
6 PDB 'reference database' .
7 'Template search output' other 'Results of the sequence search'
#
#
loop_
_ma_data_group.ordinal_id
_ma_data_group.group_id
_ma_data_group.data_id
1 1 2
2 1 5
3 1 6
4 2 7
5 3 2
6 3 1
7 3 3
8 4 1
9 4 3
10 5 4
#
#
loop_
_ma_data_ref_db.data_id
_ma_data_ref_db.name
_ma_data_ref_db.location_url
_ma_data_ref_db.version
_ma_data_ref_db.release_date
5 SMTL https://swissmodel.expasy.org/templates/ . 2025-09-10
6 PDB https://www.wwpdb.org . 2025-09-05
#
#
loop_
_ma_target_entity.entity_id
_ma_target_entity.data_id
_ma_target_entity.origin
1 2 'reference database'
#
#
loop_
_ma_target_entity_instance.asym_id
_ma_target_entity_instance.entity_id
_ma_target_entity_instance.details
A 1 .
#
#
loop_
_ma_template_trans_matrix.id
_ma_template_trans_matrix.rot_matrix[1][1]
_ma_template_trans_matrix.rot_matrix[2][1]
_ma_template_trans_matrix.rot_matrix[3][1]
_ma_template_trans_matrix.rot_matrix[1][2]
_ma_template_trans_matrix.rot_matrix[2][2]
_ma_template_trans_matrix.rot_matrix[3][2]
_ma_template_trans_matrix.rot_matrix[1][3]
_ma_template_trans_matrix.rot_matrix[2][3]
_ma_template_trans_matrix.rot_matrix[3][3]
_ma_template_trans_matrix.tr_vector[1]
_ma_template_trans_matrix.tr_vector[2]
_ma_template_trans_matrix.tr_vector[3]
1 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000
1.000000 0 0 0
#
#
loop_
_ma_template_details.ordinal_id
_ma_template_details.template_id
_ma_template_details.template_origin
_ma_template_details.template_entity_type
_ma_template_details.template_trans_matrix_id
_ma_template_details.template_data_id
_ma_template_details.target_asym_id
_ma_template_details.template_label_asym_id
_ma_template_details.template_label_entity_id
_ma_template_details.template_model_num
_ma_template_details.template_auth_asym_id
1 1 'reference database' polymer 1 1 A D 4 1 D
#
#
loop_
_ma_template_poly.template_id
_ma_template_poly.seq_one_letter_code
_ma_template_poly.seq_one_letter_code_can
1
;MAMATQASAATRHLITAAWSPSSKPRAVSLALPSTRGPAPLCAAASDSPAPATKEPEAAPAPAGFVPPQL
DPSTPSPIFGGSTGGLLRKAQVEEFYVITWTSPKEQVFEMPTGGAAIMREGPNLLKLARKEQCLALGNRL
RSKYKIAYQFYRVFPNGEVQYLHPKDGVYPEKVNAGRQGVGQNFRSIGKNVSPIEVKFTGKNTFDV
;

;MAMATQASAATRHLITAAWSPSSKPRAVSLALPSTRGPAPLCAAASDSPAPATKEPEAAPAPAGFVPPQL
DPSTPSPIFGGSTGGLLRKAQVEEFYVITWTSPKEQVFEMPTGGAAIMREGPNLLKLARKEQCLALGNRL
RSKYKIAYQFYRVFPNGEVQYLHPKDGVYPEKVNAGRQGVGQNFRSIGKNVSPIEVKFTGKNTFDV
;

#
#
loop_
_ma_template_poly_segment.id
_ma_template_poly_segment.template_id
_ma_template_poly_segment.residue_number_begin
_ma_template_poly_segment.residue_number_end
1 1 60 88
#
#
loop_
_ma_template_ref_db_details.template_id
_ma_template_ref_db_details.db_name
_ma_template_ref_db_details.db_name_other_details
_ma_template_ref_db_details.db_accession_code
_ma_template_ref_db_details.db_version_date
1 PDB . 8bcv 2025-07-09
#
#
loop_
_ma_target_template_poly_mapping.id
_ma_target_template_poly_mapping.template_segment_id
_ma_target_template_poly_mapping.target_asym_id
_ma_target_template_poly_mapping.target_seq_id_begin
_ma_target_template_poly_mapping.target_seq_id_end
1 1 A 1 29
#
#
loop_
_ma_alignment_info.alignment_id
_ma_alignment_info.data_id
_ma_alignment_info.software_group_id
_ma_alignment_info.alignment_length
_ma_alignment_info.alignment_type
_ma_alignment_info.alignment_mode
1 3 1 29 'target-template pairwise alignment' local
#
#
loop_
_ma_alignment_details.ordinal_id
_ma_alignment_details.alignment_id
_ma_alignment_details.template_segment_id
_ma_alignment_details.target_asym_id
_ma_alignment_details.score_type
_ma_alignment_details.score_type_other_details
_ma_alignment_details.score_value
_ma_alignment_details.percent_sequence_identity
_ma_alignment_details.sequence_identity_denominator
_ma_alignment_details.sequence_identity_denominator_other_details
1 1 1 A 'HHblits e-value' . 3.6e-13 86.207
'Number of aligned residue pairs (not including the gaps)' .
#
#
loop_
_ma_alignment.ordinal_id
_ma_alignment.alignment_id
_ma_alignment.target_template_flag
_ma_alignment.sequence
1 1 1 EAPVGFTPPELDPSTPSPIFGGSTGGLLR
2 1 2 PAPAGFVPPQLDPSTPSPIFGGSTGGLLR
#
#
loop_
_ma_protocol_step.ordinal_id
_ma_protocol_step.protocol_id
_ma_protocol_step.step_id
_ma_protocol_step.method_type
_ma_protocol_step.step_name
_ma_protocol_step.details
_ma_protocol_step.software_group_id
_ma_protocol_step.input_data_group_id
_ma_protocol_step.output_data_group_id
1 1 1 'template search' 'template search' 'SWISS-MODEL template search in PDB' 2
1 2
2 1 2 'template selection' 'template selection'
'Automatic template selection by SWISS-MODEL {QSQE=0.000}' 3 2 4
3 1 3 modeling 'homology modeling'
'SWISS-MODEL auto-model mode using ProMod3 on 8bcv.1' 4 3 5
#
#
loop_
_ma_model_list.ordinal_id
_ma_model_list.model_name
_ma_model_list.data_id
_ma_model_list.model_type
_ma_model_list.model_type_other_details
1 'model 1' 4 'Homology model' .
#
#
loop_
_ma_model_group.id
_ma_model_group.name
_ma_model_group.details
1 . .
#
#
loop_
_ma_model_group_link.group_id
_ma_model_group_link.model_id
1 1
#
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_alt_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.auth_seq_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.label_entity_id
_atom_site.auth_asym_id
_atom_site.auth_comp_id
_atom_site.B_iso_or_equiv
_atom_site.pdbx_PDB_model_num
ATOM 1 N N . GLY 5 5 ? A 153.240 177.417 207.264 1 1 D GLY 0.420 1
ATOM 2 C CA . GLY 5 5 ? A 153.390 178.609 206.344 1 1 D GLY 0.420 1
ATOM 3 C C . GLY 5 5 ? A 154.240 178.301 205.150 1 1 D GLY 0.420 1
ATOM 4 O O . GLY 5 5 ? A 153.749 177.701 204.210 1 1 D GLY 0.420 1
ATOM 5 N N . PHE 6 6 ? A 155.537 178.670 205.167 1 1 D PHE 0.470 1
ATOM 6 C CA . PHE 6 6 ? A 156.458 178.365 204.092 1 1 D PHE 0.470 1
ATOM 7 C C . PHE 6 6 ? A 156.959 176.932 204.233 1 1 D PHE 0.470 1
ATOM 8 O O . PHE 6 6 ? A 157.373 176.511 205.312 1 1 D PHE 0.470 1
ATOM 9 C CB . PHE 6 6 ? A 157.622 179.399 204.129 1 1 D PHE 0.470 1
ATOM 10 C CG . PHE 6 6 ? A 158.683 179.133 203.090 1 1 D PHE 0.470 1
ATOM 11 C CD1 . PHE 6 6 ? A 158.444 179.382 201.729 1 1 D PHE 0.470 1
ATOM 12 C CD2 . PHE 6 6 ? A 159.920 178.588 203.476 1 1 D PHE 0.470 1
ATOM 13 C CE1 . PHE 6 6 ? A 159.433 179.110 200.772 1 1 D PHE 0.470 1
ATOM 14 C CE2 . PHE 6 6 ? A 160.911 178.319 202.524 1 1 D PHE 0.470 1
ATOM 15 C CZ . PHE 6 6 ? A 160.669 178.586 201.171 1 1 D PHE 0.470 1
ATOM 16 N N . THR 7 7 ? A 156.914 176.164 203.133 1 1 D THR 0.740 1
ATOM 17 C CA . THR 7 7 ? A 157.396 174.795 203.075 1 1 D THR 0.740 1
ATOM 18 C C . THR 7 7 ? A 158.637 174.828 202.210 1 1 D THR 0.740 1
ATOM 19 O O . THR 7 7 ? A 158.510 175.196 201.040 1 1 D THR 0.740 1
ATOM 20 C CB . THR 7 7 ? A 156.394 173.840 202.440 1 1 D THR 0.740 1
ATOM 21 O OG1 . THR 7 7 ? A 155.233 173.774 203.254 1 1 D THR 0.740 1
ATOM 22 C CG2 . THR 7 7 ? A 156.936 172.405 202.361 1 1 D THR 0.740 1
ATOM 23 N N . PRO 8 8 ? A 159.846 174.510 202.681 1 1 D PRO 0.680 1
ATOM 24 C CA . PRO 8 8 ? A 161.054 174.587 201.868 1 1 D PRO 0.680 1
ATOM 25 C C . PRO 8 8 ? A 161.030 173.500 200.793 1 1 D PRO 0.680 1
ATOM 26 O O . PRO 8 8 ? A 160.504 172.427 201.089 1 1 D PRO 0.680 1
ATOM 27 C CB . PRO 8 8 ? A 162.210 174.377 202.875 1 1 D PRO 0.680 1
ATOM 28 C CG . PRO 8 8 ? A 161.561 173.650 204.061 1 1 D PRO 0.680 1
ATOM 29 C CD . PRO 8 8 ? A 160.140 174.210 204.080 1 1 D PRO 0.680 1
ATOM 30 N N . PRO 9 9 ? A 161.508 173.707 199.568 1 1 D PRO 0.720 1
ATOM 31 C CA . PRO 9 9 ? A 161.543 172.671 198.544 1 1 D PRO 0.720 1
ATOM 32 C C . PRO 9 9 ? A 162.474 171.522 198.876 1 1 D PRO 0.720 1
ATOM 33 O O . PRO 9 9 ? A 163.409 171.672 199.670 1 1 D PRO 0.720 1
ATOM 34 C CB . PRO 9 9 ? A 162.003 173.424 197.281 1 1 D PRO 0.720 1
ATOM 35 C CG . PRO 9 9 ? A 162.860 174.578 197.818 1 1 D PRO 0.720 1
ATOM 36 C CD . PRO 9 9 ? A 162.180 174.932 199.143 1 1 D PRO 0.720 1
ATOM 37 N N . GLU 10 10 ? A 162.239 170.357 198.258 1 1 D GLU 0.580 1
ATOM 38 C CA . GLU 10 10 ? A 163.031 169.172 198.436 1 1 D GLU 0.580 1
ATOM 39 C C . GLU 10 10 ? A 164.172 169.169 197.447 1 1 D GLU 0.580 1
ATOM 40 O O . GLU 10 10 ? A 164.052 169.619 196.303 1 1 D GLU 0.580 1
ATOM 41 C CB . GLU 10 10 ? A 162.149 167.916 198.278 1 1 D GLU 0.580 1
ATOM 42 C CG . GLU 10 10 ? A 161.068 167.831 199.385 1 1 D GLU 0.580 1
ATOM 43 C CD . GLU 10 10 ? A 160.186 166.592 199.257 1 1 D GLU 0.580 1
ATOM 44 O OE1 . GLU 10 10 ? A 160.343 165.841 198.262 1 1 D GLU 0.580 1
ATOM 45 O OE2 . GLU 10 10 ? A 159.342 166.399 200.169 1 1 D GLU 0.580 1
ATOM 46 N N . LEU 11 11 ? A 165.348 168.692 197.876 1 1 D LEU 0.510 1
ATOM 47 C CA . LEU 11 11 ? A 166.505 168.590 197.018 1 1 D LEU 0.510 1
ATOM 48 C C . LEU 11 11 ? A 166.388 167.393 196.081 1 1 D LEU 0.510 1
ATOM 49 O O . LEU 11 11 ? A 166.462 166.245 196.512 1 1 D LEU 0.510 1
ATOM 50 C CB . LEU 11 11 ? A 167.782 168.487 197.890 1 1 D LEU 0.510 1
ATOM 51 C CG . LEU 11 11 ? A 169.111 168.311 197.120 1 1 D LEU 0.510 1
ATOM 52 C CD1 . LEU 11 11 ? A 169.343 169.394 196.050 1 1 D LEU 0.510 1
ATOM 53 C CD2 . LEU 11 11 ? A 170.287 168.274 198.111 1 1 D LEU 0.510 1
ATOM 54 N N . ASP 12 12 ? A 166.217 167.649 194.765 1 1 D ASP 0.550 1
ATOM 55 C CA . ASP 12 12 ? A 166.191 166.632 193.740 1 1 D ASP 0.550 1
ATOM 56 C C . ASP 12 12 ? A 167.646 166.234 193.404 1 1 D ASP 0.550 1
ATOM 57 O O . ASP 12 12 ? A 168.438 167.108 193.033 1 1 D ASP 0.550 1
ATOM 58 C CB . ASP 12 12 ? A 165.393 167.163 192.511 1 1 D ASP 0.550 1
ATOM 59 C CG . ASP 12 12 ? A 165.077 166.065 191.504 1 1 D ASP 0.550 1
ATOM 60 O OD1 . ASP 12 12 ? A 165.442 164.890 191.770 1 1 D ASP 0.550 1
ATOM 61 O OD2 . ASP 12 12 ? A 164.448 166.395 190.469 1 1 D ASP 0.550 1
ATOM 62 N N . PRO 13 13 ? A 168.090 164.980 193.550 1 1 D PRO 0.690 1
ATOM 63 C CA . PRO 13 13 ? A 169.471 164.590 193.306 1 1 D PRO 0.690 1
ATOM 64 C C . PRO 13 13 ? A 169.736 164.343 191.827 1 1 D PRO 0.690 1
ATOM 65 O O . PRO 13 13 ? A 170.883 164.067 191.490 1 1 D PRO 0.690 1
ATOM 66 C CB . PRO 13 13 ? A 169.637 163.299 194.135 1 1 D PRO 0.690 1
ATOM 67 C CG . PRO 13 13 ? A 168.234 162.687 194.161 1 1 D PRO 0.690 1
ATOM 68 C CD . PRO 13 13 ? A 167.333 163.920 194.214 1 1 D PRO 0.690 1
ATOM 69 N N . SER 14 14 ? A 168.731 164.400 190.920 1 1 D SER 0.720 1
ATOM 70 C CA . SER 14 14 ? A 168.939 164.098 189.505 1 1 D SER 0.720 1
ATOM 71 C C . SER 14 14 ? A 169.144 165.353 188.666 1 1 D SER 0.720 1
ATOM 72 O O . SER 14 14 ? A 169.283 165.276 187.447 1 1 D SER 0.720 1
ATOM 73 C CB . SER 14 14 ? A 167.759 163.281 188.897 1 1 D SER 0.720 1
ATOM 74 O OG . SER 14 14 ? A 166.559 164.050 188.866 1 1 D SER 0.720 1
ATOM 75 N N . THR 15 15 ? A 169.200 166.546 189.305 1 1 D THR 0.680 1
ATOM 76 C CA . THR 15 15 ? A 169.412 167.828 188.622 1 1 D THR 0.680 1
ATOM 77 C C . THR 15 15 ? A 170.742 167.873 187.864 1 1 D THR 0.680 1
ATOM 78 O O . THR 15 15 ? A 171.767 167.549 188.465 1 1 D THR 0.680 1
ATOM 79 C CB . THR 15 15 ? A 169.343 169.046 189.545 1 1 D THR 0.680 1
ATOM 80 O OG1 . THR 15 15 ? A 168.087 169.057 190.200 1 1 D THR 0.680 1
ATOM 81 C CG2 . THR 15 15 ? A 169.378 170.371 188.765 1 1 D THR 0.680 1
ATOM 82 N N . PRO 16 16 ? A 170.837 168.240 186.576 1 1 D PRO 0.680 1
ATOM 83 C CA . PRO 16 16 ? A 172.110 168.334 185.866 1 1 D PRO 0.680 1
ATOM 84 C C . PRO 16 16 ? A 173.079 169.366 186.419 1 1 D PRO 0.680 1
ATOM 85 O O . PRO 16 16 ? A 172.663 170.328 187.068 1 1 D PRO 0.680 1
ATOM 86 C CB . PRO 16 16 ? A 171.726 168.691 184.413 1 1 D PRO 0.680 1
ATOM 87 C CG . PRO 16 16 ? A 170.253 168.288 184.290 1 1 D PRO 0.680 1
ATOM 88 C CD . PRO 16 16 ? A 169.705 168.523 185.698 1 1 D PRO 0.680 1
ATOM 89 N N . SER 17 17 ? A 174.380 169.210 186.127 1 1 D SER 0.780 1
ATOM 90 C CA . SER 17 17 ? A 175.427 170.107 186.584 1 1 D SER 0.780 1
ATOM 91 C C . SER 17 17 ? A 175.840 171.009 185.435 1 1 D SER 0.780 1
ATOM 92 O O . SER 17 17 ? A 175.638 170.622 184.283 1 1 D SER 0.780 1
ATOM 93 C CB . SER 17 17 ? A 176.684 169.339 187.066 1 1 D SER 0.780 1
ATOM 94 O OG . SER 17 17 ? A 176.355 168.614 188.250 1 1 D SER 0.780 1
ATOM 95 N N . PRO 18 18 ? A 176.400 172.204 185.644 1 1 D PRO 0.800 1
ATOM 96 C CA . PRO 18 18 ? A 177.001 173.011 184.584 1 1 D PRO 0.800 1
ATOM 97 C C . PRO 18 18 ? A 178.091 172.332 183.772 1 1 D PRO 0.800 1
ATOM 98 O O . PRO 18 18 ? A 178.700 171.359 184.228 1 1 D PRO 0.800 1
ATOM 99 C CB . PRO 18 18 ? A 177.567 174.247 185.312 1 1 D PRO 0.800 1
ATOM 100 C CG . PRO 18 18 ? A 176.771 174.321 186.619 1 1 D PRO 0.800 1
ATOM 101 C CD . PRO 18 18 ? A 176.512 172.851 186.950 1 1 D PRO 0.800 1
ATOM 102 N N . ILE 19 19 ? A 178.386 172.848 182.568 1 1 D ILE 0.830 1
ATOM 103 C CA . ILE 19 19 ? A 179.403 172.305 181.693 1 1 D ILE 0.830 1
ATOM 104 C C . ILE 19 19 ? A 180.758 172.825 182.146 1 1 D ILE 0.830 1
ATOM 105 O O . ILE 19 19 ? A 181.060 174.016 182.034 1 1 D ILE 0.830 1
ATOM 106 C CB . ILE 19 19 ? A 179.121 172.663 180.232 1 1 D ILE 0.830 1
ATOM 107 C CG1 . ILE 19 19 ? A 177.684 172.213 179.838 1 1 D ILE 0.830 1
ATOM 108 C CG2 . ILE 19 19 ? A 180.201 172.021 179.325 1 1 D ILE 0.830 1
ATOM 109 C CD1 . ILE 19 19 ? A 177.254 172.639 178.427 1 1 D ILE 0.830 1
ATOM 110 N N . PHE 20 20 ? A 181.612 171.947 182.697 1 1 D PHE 0.780 1
ATOM 111 C CA . PHE 20 20 ? A 182.868 172.350 183.279 1 1 D PHE 0.780 1
ATOM 112 C C . PHE 20 20 ? A 183.902 171.278 182.994 1 1 D PHE 0.780 1
ATOM 113 O O . PHE 20 20 ? A 183.586 170.091 182.943 1 1 D PHE 0.780 1
ATOM 114 C CB . PHE 20 20 ? A 182.701 172.564 184.815 1 1 D PHE 0.780 1
ATOM 115 C CG . PHE 20 20 ? A 183.883 173.274 185.428 1 1 D PHE 0.780 1
ATOM 116 C CD1 . PHE 20 20 ? A 184.303 174.515 184.919 1 1 D PHE 0.780 1
ATOM 117 C CD2 . PHE 20 20 ? A 184.583 172.715 186.512 1 1 D PHE 0.780 1
ATOM 118 C CE1 . PHE 20 20 ? A 185.414 175.172 185.460 1 1 D PHE 0.780 1
ATOM 119 C CE2 . PHE 20 20 ? A 185.687 173.379 187.068 1 1 D PHE 0.780 1
ATOM 120 C CZ . PHE 20 20 ? A 186.107 174.603 186.535 1 1 D PHE 0.780 1
ATOM 121 N N . GLY 21 21 ? A 185.172 171.685 182.766 1 1 D GLY 0.720 1
ATOM 122 C CA . GLY 21 21 ? A 186.266 170.772 182.450 1 1 D GLY 0.720 1
ATOM 123 C C . GLY 21 21 ? A 187.006 170.228 183.648 1 1 D GLY 0.720 1
ATOM 124 O O . GLY 21 21 ? A 187.810 169.326 183.526 1 1 D GLY 0.720 1
ATOM 125 N N . GLY 22 22 ? A 186.738 170.787 184.852 1 1 D GLY 0.730 1
ATOM 126 C CA . GLY 22 22 ? A 187.417 170.392 186.082 1 1 D GLY 0.730 1
ATOM 127 C C . GLY 22 22 ? A 188.512 171.345 186.480 1 1 D GLY 0.730 1
ATOM 128 O O . GLY 22 22 ? A 188.963 172.191 185.706 1 1 D GLY 0.730 1
ATOM 129 N N . SER 23 23 ? A 188.961 171.261 187.740 1 1 D SER 0.780 1
ATOM 130 C CA . SER 23 23 ? A 189.984 172.133 188.283 1 1 D SER 0.780 1
ATOM 131 C C . SER 23 23 ? A 190.553 171.460 189.508 1 1 D SER 0.780 1
ATOM 132 O O . SER 23 23 ? A 190.069 170.404 189.927 1 1 D SER 0.780 1
ATOM 133 C CB . SER 23 23 ? A 189.502 173.579 188.653 1 1 D SER 0.780 1
ATOM 134 O OG . SER 23 23 ? A 188.642 173.613 189.800 1 1 D SER 0.780 1
ATOM 135 N N . THR 24 24 ? A 191.593 172.039 190.128 1 1 D THR 0.750 1
ATOM 136 C CA . THR 24 24 ? A 192.215 171.530 191.338 1 1 D THR 0.750 1
ATOM 137 C C . THR 24 24 ? A 191.681 172.223 192.591 1 1 D THR 0.750 1
ATOM 138 O O . THR 24 24 ? A 192.166 171.999 193.682 1 1 D THR 0.750 1
ATOM 139 C CB . THR 24 24 ? A 193.729 171.731 191.299 1 1 D THR 0.750 1
ATOM 140 O OG1 . THR 24 24 ? A 194.066 173.066 190.942 1 1 D THR 0.750 1
ATOM 141 C CG2 . THR 24 24 ? A 194.317 170.843 190.194 1 1 D THR 0.750 1
ATOM 142 N N . GLY 25 25 ? A 190.638 173.089 192.445 1 1 D GLY 0.750 1
ATOM 143 C CA . GLY 25 25 ? A 190.114 173.917 193.533 1 1 D GLY 0.750 1
ATOM 144 C C . GLY 25 25 ? A 188.810 173.449 194.132 1 1 D GLY 0.750 1
ATOM 145 O O . GLY 25 25 ? A 188.159 174.185 194.842 1 1 D GLY 0.750 1
ATOM 146 N N . GLY 26 26 ? A 188.371 172.216 193.783 1 1 D GLY 0.680 1
ATOM 147 C CA . GLY 26 26 ? A 187.074 171.688 194.209 1 1 D GLY 0.680 1
ATOM 148 C C . GLY 26 26 ? A 187.069 170.962 195.537 1 1 D GLY 0.680 1
ATOM 149 O O . GLY 26 26 ? A 187.736 171.329 196.493 1 1 D GLY 0.680 1
ATOM 150 N N . LEU 27 27 ? A 186.238 169.901 195.639 1 1 D LEU 0.590 1
ATOM 151 C CA . LEU 27 27 ? A 186.118 169.096 196.843 1 1 D LEU 0.590 1
ATOM 152 C C . LEU 27 27 ? A 187.359 168.301 197.218 1 1 D LEU 0.590 1
ATOM 153 O O . LEU 27 27 ? A 188.098 167.799 196.369 1 1 D LEU 0.590 1
ATOM 154 C CB . LEU 27 27 ? A 184.909 168.129 196.789 1 1 D LEU 0.590 1
ATOM 155 C CG . LEU 27 27 ? A 183.527 168.818 196.751 1 1 D LEU 0.590 1
ATOM 156 C CD1 . LEU 27 27 ? A 182.434 167.739 196.709 1 1 D LEU 0.590 1
ATOM 157 C CD2 . LEU 27 27 ? A 183.285 169.750 197.955 1 1 D LEU 0.590 1
ATOM 158 N N . LEU 28 28 ? A 187.576 168.148 198.533 1 1 D LEU 0.760 1
ATOM 159 C CA . LEU 28 28 ? A 188.609 167.320 199.105 1 1 D LEU 0.760 1
ATOM 160 C C . LEU 28 28 ? A 187.925 166.234 199.921 1 1 D LEU 0.760 1
ATOM 161 O O . LEU 28 28 ? A 186.733 165.982 199.744 1 1 D LEU 0.760 1
ATOM 162 C CB . LEU 28 28 ? A 189.633 168.175 199.907 1 1 D LEU 0.760 1
ATOM 163 C CG . LEU 28 28 ? A 190.489 169.096 199.001 1 1 D LEU 0.760 1
ATOM 164 C CD1 . LEU 28 28 ? A 191.328 170.069 199.847 1 1 D LEU 0.760 1
ATOM 165 C CD2 . LEU 28 28 ? A 191.399 168.291 198.053 1 1 D LEU 0.760 1
ATOM 166 N N . ARG 29 29 ? A 188.699 165.524 200.758 1 1 D ARG 0.490 1
ATOM 167 C CA . ARG 29 29 ? A 188.262 164.415 201.581 1 1 D ARG 0.490 1
ATOM 168 C C . ARG 29 29 ? A 187.410 164.827 202.820 1 1 D ARG 0.490 1
ATOM 169 O O . ARG 29 29 ? A 187.304 166.047 203.114 1 1 D ARG 0.490 1
ATOM 170 C CB . ARG 29 29 ? A 189.530 163.699 202.122 1 1 D ARG 0.490 1
ATOM 171 C CG . ARG 29 29 ? A 189.312 162.232 202.552 1 1 D ARG 0.490 1
ATOM 172 C CD . ARG 29 29 ? A 190.032 161.913 203.861 1 1 D ARG 0.490 1
ATOM 173 N NE . ARG 29 29 ? A 189.717 160.486 204.222 1 1 D ARG 0.490 1
ATOM 174 C CZ . ARG 29 29 ? A 189.871 159.980 205.452 1 1 D ARG 0.490 1
ATOM 175 N NH1 . ARG 29 29 ? A 190.338 160.732 206.443 1 1 D ARG 0.490 1
ATOM 176 N NH2 . ARG 29 29 ? A 189.537 158.717 205.711 1 1 D ARG 0.490 1
ATOM 177 O OXT . ARG 29 29 ? A 186.917 163.901 203.522 1 1 D ARG 0.490 1
#
#
loop_
_atom_type.symbol
C
N
O
#
#
loop_
_ma_qa_metric.id
_ma_qa_metric.name
_ma_qa_metric.description
_ma_qa_metric.type
_ma_qa_metric.mode
_ma_qa_metric.type_other_details
_ma_qa_metric.software_group_id
1 QMEANDisCo 'Predicted accuracy according to all-atom lDDT in [0,1].'
'pLDDT all-atom in [0,1]' local . 5
2 QMEANDisCo 'Predicted accuracy according to all-atom lDDT in [0,1].'
'pLDDT all-atom in [0,1]' global . 5
3 GMQE
'Global Model Quality Estimate of the model accuracy, calculated by SWISS-MODEL.'
'normalized score' global . 6
#
#
loop_
_ma_qa_metric_global.ordinal_id
_ma_qa_metric_global.model_id
_ma_qa_metric_global.metric_id
_ma_qa_metric_global.metric_value
1 1 2 0.675
2 1 3 0.641
#
#
loop_
_ma_qa_metric_local.ordinal_id
_ma_qa_metric_local.model_id
_ma_qa_metric_local.label_asym_id
_ma_qa_metric_local.label_seq_id
_ma_qa_metric_local.label_comp_id
_ma_qa_metric_local.metric_id
_ma_qa_metric_local.metric_value
1 1 A 5 GLY 1 0.420
2 1 A 6 PHE 1 0.470
3 1 A 7 THR 1 0.740
4 1 A 8 PRO 1 0.680
5 1 A 9 PRO 1 0.720
6 1 A 10 GLU 1 0.580
7 1 A 11 LEU 1 0.510
8 1 A 12 ASP 1 0.550
9 1 A 13 PRO 1 0.690
10 1 A 14 SER 1 0.720
11 1 A 15 THR 1 0.680
12 1 A 16 PRO 1 0.680
13 1 A 17 SER 1 0.780
14 1 A 18 PRO 1 0.800
15 1 A 19 ILE 1 0.830
16 1 A 20 PHE 1 0.780
17 1 A 21 GLY 1 0.720
18 1 A 22 GLY 1 0.730
19 1 A 23 SER 1 0.780
20 1 A 24 THR 1 0.750
21 1 A 25 GLY 1 0.750
22 1 A 26 GLY 1 0.680
23 1 A 27 LEU 1 0.590
24 1 A 28 LEU 1 0.760
25 1 A 29 ARG 1 0.490
#