A0A2I3GTM1 (A0A2I3GTM1_NOMLE) Nomascus leucogenys (Northern white-cheeked gibbon) (Hylobates leucogenys)

Small nuclear ribonucleoprotein U5 subunit 40 UniProtKBInterProSTRINGInteractive Modelling

357 aa; Sequence (Fasta) ; 13 identical sequences

Available Structures

29 Experimental Structures

DescriptionPDB IDOligo-stateRangeLigands
Structure of the human U5.U4/U6 tri-snRNP at 2.9A resolution.
6qw6
 Heteromer
O43172; O43290; O43395; O75643; O94906; O95777; P14678; P55769; P62304; P62306; P62308; P62310; P62312; P62314; P62316; P62318; P83876; Q15029; Q53GS9; Q6P2Q9; Q8WVK2; Q8WWY3; Q96DI7; Q9BTD8; Q9BUQ8; Q9UK45; Q9Y333; Q9Y4Y9; Q9Y4Z0; 		51-357
1×IHP; 1×MG; 1×GTP; 1×ZN;
Assess
Cryo-EM structure of a human spliceosome activated for step 2 of splicing (C* complex)
5mqf
 Heteromer
O43660; O60306; O60508; O75934; O95926; P08579; P09661; P14678; P38919; P41223; P62304; P62306; P62308; P62314; P62316; P62318; Q13573; Q14562; Q15029; Q6P2Q9; Q96DI7; Q99459; Q9BZJ0; Q9HCG8; Q9HCS7; Q9NW64; Q9P013; Q9UMS4; Q9UNP9; Q9UQ35; Q9Y3C6; 		51-357
Assess
Human post-catalytic P complex spliceosome
6qdv
 Heteromer
O43660; O60306; O60508; O75643; O75934; O95391; O95926; P08579; P09661; P14678; P38919; P41223; P62304; P62306; P62308; P62314; P62316; P62318; Q13573; Q14562; Q15029; Q6IQ49; Q6P2Q9; Q8N5F7; Q8WUQ7; Q96A72; Q96DI7; Q99459; Q9BZJ0; Q9H875; Q9HCG8; Q9HCS7; Q9NW64; Q9P013; Q9UMS4; Q9UQ35; Q9Y3C6; Q9Y421; Q9Y5S9; 		51-357
7×MG; 1×K; 1×ATP; 1×GTP; 7×ZN; 1×IHP;
Assess
Cryo-EM Structure of the human minor pre-B complex (pre-precatalytic spliceosome) U11 and tri-snRNP…
8y6o
 Heteromer
O43172; O43290; O43395; O75643; O94906; P14678; P55769; P62304; P62306; P62308; P62314; P62316; P62318; Q13523; Q15029; Q16560; Q53GS9; Q6IEG0; Q6P2Q9; Q86UT8; Q8N8D1; Q8WWY3; Q96DI7; Q9BUQ8; Q9BV90; Q9NX01; Q9UDW3; 		51-357
2×MG; 1×IHP; 1×GTP; 6×ZN;
Assess
Structure of the human 20S U5 snRNP
8rc0
 Heteromer
O75643; O94906; O95400; P14678; P62304; P62306; P62308; P62314; P62316; P62318; Q15029; Q6P2Q9; Q96DI7; Q9BUQ8; 		51-357
1×GTP;
Assess
Structure of the recycling U5 snRNP bound to chaperone CD2BP2 (State 4)
8q7x
 Heteromer
O75643; O94906; O95400; P14678; P62304; P62306; P62308; P62314; P62316; P62318; Q15029; Q6P2Q9; Q96DI7; Q9BUQ8; 		52-357
1×MG; 1×GTP;
Assess
Structure of the recycling U5 snRNP bound to chaperones CD2BP2 and TSSC4 (State 1)
8q7v
 Heteromer
O75643; O94906; O95400; P14678; P62304; P62306; P62308; P62314; P62316; P62318; Q15029; Q6P2Q9; Q96DI7; Q9Y5U2; 		52-357
1×MG; 1×GTP;
Assess
Structure of the recycling U5 snRNP bound to chaperones CD2BP2 and TSSC4 (State 2)
8q7q
 Heteromer
O75643; O94906; O95400; P14678; P62304; P62306; P62308; P62314; P62316; P62318; Q15029; Q6P2Q9; Q96DI7; Q9Y5U2; 		52-357
1×MG; 1×GTP;
Assess
Structure of the recycling U5 snRNP bound to chaperone CD2BP2 (State 3)
8q7w
 Heteromer
O75643; O94906; O95400; P14678; P62304; P62306; P62308; P62314; P62316; P62318; Q15029; Q6P2Q9; Q96DI7; Q9BUQ8; 		52-357
1×MG; 1×GTP;
Assess
Cryo-EM structure of a human intron lariat spliceosome after Prp43 loaded (ILS2 complex) at 2.9 ang…
6id1
 Heteromer
O43143; O43660; O60306; O60508; O75934; O95926; P08579; P09661; P14678; P41223; P62304; P62306; P62308; P62314; P62316; P62318; Q13573; Q15029; Q2TBE0; Q6P2Q9; Q96DI7; Q99459; Q9BZJ0; Q9HCS7; Q9NW64; Q9P013; Q9UMS4; Q9UNP9; Q9Y3C6; 		54-356
1×IHP; 1×GTP; 7×MG; 7×ZN;
Assess
Cryo-EM structure of a human intron lariat spliceosome prior to Prp43 loaded (ILS1 complex) at 2.9 …
6id0
 Heteromer
O43660; O60306; O60508; O75934; O95926; P08579; P09661; P14678; P41223; P62304; P62306; P62308; P62314; P62316; P62318; Q13573; Q15029; Q2TBE0; Q6P2Q9; Q96DI7; Q99459; Q9BZJ0; Q9HCS7; Q9NW64; Q9P013; Q9UMS4; Q9UNP9; Q9Y3C6; 		54-356
1×IHP; 1×GTP; 7×MG; 7×ZN;
Assess
Cryo-EM structure of a human post-catalytic spliceosome (P complex) at 3.0 angstrom
6icz
 Heteromer
O15234; O43660; O60306; O60508; O75643; O75934; O95391; O95926; P08579; P09661; P14678; P38919; P41223; P62304; P62306; P62308; P62314; P62316; P62318; Q13573; Q14562; Q15029; Q6P2Q9; Q96A72; Q96DI7; Q99459; Q9BZJ0; Q9H875; Q9HCG8; Q9HCS7; Q9NW64; Q9P013; Q9UMS4; Q9UNP9; Q9UQ35; Q9Y3C6; Q9Y5S9; 		54-356
1×IHP; 1×GTP; 9×MG; 7×ZN; 1×ATP;
Assess
Human pre-Bact-2 spliceosome
7abi
 Heteromer
O43660; O60306; O60508; O60870; O75533; O75643; P08579; P09661; P14678; P41223; P55081; P62304; P62306; P62308; P62314; P62316; P62318; Q12874; Q13356; Q13435; Q13573; Q15029; Q15393; Q15427; Q15428; Q15459; Q6P2Q9; Q7RTV0; Q8IYB3; Q8NAV1; Q8TAD8; Q8WYA6; Q96DI7; Q96NC0; Q99459; Q9BRD0; Q9BWJ5; Q9BZJ0; Q9BZL1; Q9HCS7; Q9NW64; Q9P013; Q9UNP9; Q9Y388; Q9Y3B4; 		56-357
1×GTP; 1×MG; 1×IHP;
Assess
Human pre-Bact-1 spliceosome
7abg
 Heteromer
O14776; O43660; O75533; O75643; O95777; P08579; P09661; P14678; P41223; P52298; P55081; P62304; P62306; P62308; P62310; P62312; P62314; P62316; P62318; Q07955; Q09161; Q12874; Q13435; Q13573; Q15029; Q15393; Q15427; Q15428; Q15459; Q6P2Q9; Q7RTV0; Q8IYB3; Q8NAV1; Q8TAD8; Q96DI7; Q96NC0; Q99459; Q9BWJ5; Q9BZL1; Q9NW64; Q9P013; Q9UK45; Q9Y2W2; Q9Y333; Q9Y3B4; Q9Y4Y9; Q9Y4Z0; 		56-357
1×IHP; 1×GTP; 1×MG; 1×GTG;
Assess
Cryo-EM structure of a pre-catalytic human spliceosome primed for activation (B complex)
5o9z
 Heteromer
O43172; O43290; O43395; O43447; O75533; O75554; O75643; O94906; O95777; P08579; P09661; P14678; P55081; P55769; P62304; P62306; P62308; P62310; P62312; P62314; P62316; P62318; P83876; Q13123; Q15029; Q15393; Q2TAY7; Q6P2Q9; Q7RTV0; Q8NAV1; Q8WWY3; Q96DI7; Q96NC0; Q9BWJ5; Q9UK45; Q9Y333; Q9Y4Y9; Q9Y4Z0; 		56-357
Assess
3D structure determination of the human*U4/U6.U5* tri-snRNP complex
3jcr
 Heteromer
O43172; O43395; O75643; O94906; O95777; P14678; P55769; P62304; P62306; P62308; P62310; P62312; P62314; P62316; P62318; P83876; Q15029; Q53GS9; Q6P2Q9; Q8WWY3; Q96DI7; Q9BUQ8; Q9UK45; Q9Y333; Q9Y4Y9; Q9Y4Z0; 		56-357
Assess
Cryo-EM Structure of the Activated Human Minor Spliceosome (minor Bact Complex)
7dvq
 Heteromer
O15541; O43660; O60231; O75533; O75643; P14678; P62304; P62306; P62308; P62314; P62316; P62318; Q13356; Q13435; Q13573; Q15029; Q15393; Q15427; Q5RL73; Q6P2Q9; Q6UX04; Q7RTV0; Q8IYB3; Q8TAD8; Q92917; Q96DI7; Q99459; Q9BRD0; Q9BWG6; Q9BWJ5; Q9BZJ0; Q9H6L4; Q9HCG8; Q9P013; Q9P021; Q9UQ35; Q9Y388; Q9Y3B4; 		58-356
1×IHP; 1×GTP; 5×MG; 2×K; 1×G5J; 7×ZN;
Assess
The cryo-EM structure of human pre-C*-II complex
7w5a
 Heteromer
O15234; O43660; O60306; O60508; O75934; O95391; O95926; P08579; P09661; P14678; P38919; P41223; P61326; P62304; P62306; P62308; P62314; P62316; P62318; Q13573; Q14562; Q15029; Q6P2Q9; Q8WUQ7; Q96DI7; Q99459; Q9BZJ0; Q9GZU8; Q9H875; Q9HCG8; Q9HCS7; Q9NW64; Q9P013; Q9UMS4; Q9UNP9; Q9UQ35; Q9Y3C6; Q9Y421; Q9Y5S9; 		58-356
1×IHP; 1×GTP; 9×MG; 7×ZN; 1×ATP;
Assess
The cryo-EM structure of human C* complex
7w5b
 Heteromer
O15234; O43660; O60306; O60508; O75643; O75934; O95391; O95926; P08579; P09661; P14678; P38919; P41223; P61326; P62304; P62306; P62308; P62314; P62316; P62318; Q13573; Q14562; Q15029; Q6P2Q9; Q8N5F7; Q8WUQ7; Q96DI7; Q99459; Q9BZJ0; Q9H875; Q9HCG8; Q9HCS7; Q9NW64; Q9P013; Q9UMS4; Q9UNP9; Q9UQ35; Q9Y3C6; Q9Y421; Q9Y5S9; 		58-356
1×IHP; 1×GTP; 9×MG; 7×ZN; 1×ATP;
Assess
Structure of a late-stage activated spliceosome (BAqr) arrested with a dominant-negative Aquarius m…
8ch6
 Heteromer
O15541; O43660; O60231; O60306; O60508; O75533; O75643; O75934; P08579; P09661; P14678; P41223; P62304; P62306; P62308; P62314; P62316; P62318; Q12874; Q13356; Q13435; Q13573; Q15029; Q15393; Q15427; Q15428; Q15459; Q6P2Q9; Q7RTV0; Q8WUA2; Q92917; Q96DI7; Q99459; Q9BRD0; Q9BWJ5; Q9BZJ0; Q9HCG8; Q9HCS7; Q9NW64; Q9P013; Q9ULR0; Q9UMS4; Q9UNP9; Q9UQ35; Q9Y3C6; 		58-356
12×ZN; 1×IHP; 1×GTP; 7×MG;
Assess
Human C Complex Spliceosome - High-resolution CORE
6zym
 Heteromer
O43660; O60508; P41223; Q13573; Q14331; Q15029; Q6P2Q9; Q86X95; Q92620; Q96DI7; Q99459; Q9BW85; Q9BZJ0; Q9HCG8; Q9NW64; Q9NW82; Q9NXE8; Q9P013; Q9ULR0; Q9UQ35; Q9Y3C6; 		58-356
5×MG; 1×IHP; 1×GTP; 7×ZN;
Assess
human Bact spliceosome core structure
6ff7
 Heteromer
O15541; O43660; O60231; O60306; O60508; O75533; O75643; O75934; P08579; P09661; P14678; P41223; P62304; P62306; P62308; P62314; P62316; P62318; Q12874; Q13435; Q13573; Q15029; Q15393; Q15428; Q15459; Q6P2Q9; Q6UX04; Q7RTV0; Q8IYB3; Q8TAD8; Q96DI7; Q99459; Q9BRD0; Q9BWJ5; Q9BZJ0; Q9HCG8; Q9HCS7; Q9NW64; Q9P013; Q9ULR0; Q9UMS4; Q9UNP9; Q9UQ35; Q9Y388; Q9Y3B4; Q9Y3C6; 		58-356
11×ZN; 5×MG; 1×IHP; 1×GTP; 2×ADP;
Assess
The cryo-EM structure of human pre-C*-I complex
7w59
 Heteromer
O15234; O43660; O60306; O60508; O75934; O95926; P08579; P09661; P14678; P38919; P41223; P61326; P62304; P62306; P62308; P62314; P62316; P62318; Q13573; Q14562; Q15029; Q6P2Q9; Q96DI7; Q99459; Q9BZJ0; Q9GZU8; Q9HCG8; Q9HCS7; Q9NW64; Q9P013; Q9UMS4; Q9UNP9; Q9UQ35; Q9Y3C6; Q9Y5S9; 		58-356
1×IHP; 1×GTP; 9×MG; 6×ZN; 1×ATP;
Assess
Cryo-EM structure of the human spliceosome just prior to exon ligation at 3.6 angstrom
5xjc
 Heteromer
O15234; O43660; O60306; O60508; O75643; O75934; O95391; O95926; P08579; P09661; P14678; P38919; P41223; P62304; P62306; P62308; P62314; P62316; P62318; Q13573; Q14562; Q15029; Q6P2Q9; Q96A72; Q96DI7; Q99459; Q9BZJ0; Q9H875; Q9HCG8; Q9HCS7; Q9NW64; Q9P013; Q9UMS4; Q9UQ35; Q9Y3C6; Q9Y5S9; 		58-356
1×IHP; 1×GTP; 11×MG; 2×ADP; 7×ZN; 2×ATP;
Assess
The Cryo-EM Structure of Human Catalytic Step I Spliceosome (C complex) at 4.1 angstrom resolution
5yzg
 Heteromer
O15234; O43660; O60306; O60508; O75643; O75934; O95926; P08579; P09661; P14678; P38919; P41223; P62304; P62306; P62308; P62314; P62316; P62318; Q13427; Q13573; Q15029; Q6P2Q9; Q92620; Q96A72; Q96BP3; Q96DI7; Q99459; Q9BW85; Q9BZJ0; Q9HCG8; Q9HCS7; Q9NW64; Q9NXE8; Q9P013; Q9ULR0; Q9UMS4; Q9UNP9; Q9UQ35; Q9Y3C6; Q9Y5S9; 		58-356
1×IHP; 1×GTP; 7×MG; 2×ADP; 7×ZN; 1×ATP;
Assess
Cryo-EM structure of a human activated spliceosome (early Bact) at 4.9 angstrom.
5z58
 Heteromer
O15541; O43660; O60231; O75533; O75643; P08579; P09661; P14678; P62304; P62306; P62308; P62314; P62316; P62318; Q12874; Q13435; Q13573; Q15029; Q15393; Q15427; Q15428; Q15459; Q6P2Q9; Q6UX04; Q7RTV0; Q8TAD8; Q96DI7; Q99459; Q9BRD0; Q9BWJ5; Q9BZJ0; Q9HCG8; Q9P013; Q9Y388; Q9Y3B4; 		58-356
1×IHP; 1×GTP; 6×MG; 4×ZN;
Assess
cryo-EM structure of a human activated spliceosome (mature Bact) at 5.1 angstrom.
5z56
 Heteromer
O15541; O43660; O60231; O60306; O60508; O75533; O75643; O75934; P08579; P09661; P14678; P41223; P62304; P62306; P62308; P62314; P62316; P62318; Q12874; Q13435; Q15029; Q15393; Q15427; Q15428; Q15459; Q6P2Q9; Q6UX04; Q7RTV0; Q8TAD8; Q96DI7; Q99459; Q9BRD0; Q9BWJ5; Q9BZJ0; Q9HCG8; Q9HCS7; Q9NW64; Q9P013; Q9UMS4; Q9UNP9; Q9UQ35; Q9Y388; Q9Y3B4; Q9Y3C6; 		58-356
1×IHP; 1×GTP; 6×MG; 13×ZN;
Assess
The Cryo-EM Structure of the Precusor of Human Pre-catalytic Spliceosome (pre-B complex)
6ah0
 Heteromer
O43172; O43395; O75533; O75643; O94906; O95777; P08579; P09661; P14678; P55769; P62304; P62306; P62308; P62310; P62312; P62314; P62316; P62318; P83876; Q12874; Q13435; Q15029; Q15393; Q15427; Q15428; Q15459; Q53GS9; Q6P2Q9; Q7RTV0; Q8WWY3; Q96DI7; Q9BUQ8; Q9BWJ5; Q9UK45; Q9Y333; Q9Y3B4; Q9Y4Y9; Q9Y4Z0; 		58-356
1×IHP; 1×GTP; 1×MG;
Assess
Cryo-EM structure of the human activated spliceosome (late Bact) at 6.5 angstrom
5z57
 Heteromer
O43660; O60231; O60306; O60508; O75533; O75643; O75934; P08579; P09661; P14678; P41223; P62304; P62306; P62308; P62314; P62316; P62318; Q12874; Q13435; Q15029; Q15393; Q15427; Q15428; Q15459; Q6P2Q9; Q7RTV0; Q8TAD8; Q96DI7; Q99459; Q9BRD0; Q9BWJ5; Q9BZJ0; Q9HCG8; Q9HCS7; Q9NW64; Q9P013; Q9UMS4; Q9UNP9; Q9UQ35; Q9Y388; Q9Y3B4; Q9Y3C6; 		58-356
1×IHP; 1×ALA; 1×GTP; 6×MG; 10×ZN;
Assess

2 SWISS-MODEL models

TemplateOligo-stateQMEANDisCoRangeLigandsTrg-Tpl Seq id (%)
6qx9.1.Amonomer0.8551-357
100.00
Assess
6ke6.33.Amonomer0.6463-356
28.32
Assess