SWISS-MODEL Repository

Marmota monax: A0A5E4A328 ; Oryctolagus cuniculus: G1TDB3 ; Ovis aries: Q6Q311 ; Bos taurus: Q56JX5 ; Camelus dromedarius: A0A4U5RF11 ; Sus scrofa: A0A4X1SLJ1 ; F2Z5G8 ; Equus caballus: F6TXZ9 ; Physeter macrocephalus: A0A2Y9T7W8 ; Delphinapterus leucas: A0A2Y9LJ70 ; Tursiops truncatus: A0A2U4BVW1 ; Leptonychotes weddellii: A0A2U3Z0G2 ; Odobenus rosmarus divergens: A0A2U3WTF8 ; Felis catus: M3VW27 ; Ailuropoda melanoleuca: C6ZIA4 ; Homo sapiens: P62851 ; Pongo abelii: H2PXP8 ; Pan troglodytes: H2Q4X3 ; Pan paniscus: A0A2R9A563 ; Gorilla gorilla gorilla: A0A2I2ZJ21 ; Papio anubis: A0A096N7S1 ; Macaca nemestrina: A0A2K6CP21 ; Macaca mulatta: F7HQ35 ; Macaca fascicularis: G7PP43 ; A0A2K5TYA6 ; Cercocebus atys: A0A2K5NBA8 ; Callithrix jacchus: F7AIV0 ; Pteropus alecto: L5KN93 ; Erinaceus europaeus: A0A1S2ZS03 ; Rhinopithecus bieti: A0A2K6KLT5 ; Taeniopygia guttata: B5FX78 ; Castor canadensis: A0A250Y9M8 ; Camelus ferus: S9YKY1 ; Monodon monoceros: A0A4U1F1R6 ; Enhydra lutris kenyoni: A0A2Y9K4V2 ; Callorhinus ursinus: A0A3Q7QS01 ; Balaenoptera acutorostrata scammoni: A0A384BBM5 ; Otolemur garnettii: H0WVY1 ; Bos indicus x Bos taurus: A0A4W2EYV4 ; Lonchura striata domestica: A0A218UPN8 ; Neomonachus schauinslandi: A0A2Y9HJQ6 ; Ursus maritimus: A0A384C024 ; Tarsius syrichta: A0A1U7U2G7 ; Neophocaena asiaeorientalis asiaeorientalis: A0A341C0W9 ; Trichechus manatus latirostris: A0A2Y9E2I6 ; Ursus arctos horribilis: A0A3Q7WIH1 ; Sousa chinensis: A0A484GU71 ; Cavia porcellus: H0VNE6 ; Rattus norvegicus: P62853 ; Mus musculus: P62852 ; Q58EA6 ; Cricetulus griseus: A0A061I1P3 ; Dipodomys ordii: A0A1S3ELH7

No models could be built to increase the coverage beyond existing experimental structures for this target sequence.

13-112

Ribosomal protein S25
IPR004977 PF03297

Experimental structures

Description	Oligo-state	Ligands	Structure	Range
Cryo-EM structures of ribosomal 80S complexes with termination factors and cricket paralysis viru...	Heteromer B7NZS8; G1SFR8; G1SGX4; G1SIZ2; G1SJB4; G1SK22; G1SP51; G1SS70; G1SVB0; G1SWM1; G1SZ47; G1T168; G1T1F0; G1T8A2; G1TDB3; G1TFE8; G1TFM5; G1TG89; G1TIB4; G1TJW1; G1TK17; G1TM55; G1TM82; G1TN62; G1TNM3; G1TPG3; G1TRM4; G1TS40; G1TU13; G1TWL4; G1TZ76; G1U0Q2; G1U7M4; P15170; P62495;		4d61	40-115
Cryo-EM structures of ribosomal 80S complexes with termination factors and cricket paralysis viru...	Heteromer B7NZS8; G1SFR8; G1SGX4; G1SIZ2; G1SJB4; G1SK22; G1SP51; G1SS70; G1SVB0; G1SZ47; G1T168; G1T8A2; G1TDB3; G1TFE8; G1TFM5; G1TG89; G1TIB4; G1TJW1; G1TK17; G1TM55; G1TM82; G1TN62; G1TNM3; G1TPG3; G1TRM4; G1TS40; G1TU13; G1TUT9; G1TWL4; G1TZ76; G1U0Q2; G1U472; G1U7M4;		4d5l	40-115
Crystal structure of the human 40S ribosomal subunit in complex with DENR-MCT-1.	Heteromer E9PR30; O43583; P08708; P08865; P15880; P23396; P25398; P39019; P42677; P46781; P46782; P46783; P60866; P61247; P62081; P62241; P62244; P62249; P62263; P62266; P62269; P62273; P62277; P62280; P62701; P62753; P62841; P62847; P62851; P62854; P62857; P62945; P63220; P63244; Q5RKT7; Q9ULC4;	1×ZN;	5vyc	41-115
Rabbit 40S ribosomal subunit in complex with eIF1 and eIF1A.	Heteromer B7NZS8; G1SFR8; G1SGX4; G1SIZ2; G1SJB4; G1SK22; G1SP51; G1SVB0; G1SZ47; G1T168; G1T8A2; G1TDB3; G1TFE8; G1TFM5; G1TG89; G1TGI6; G1TIB4; G1TJW1; G1TK17; G1TM55; G1TM82; G1TN62; G1TN72; G1TNM3; G1TPG3; G1TRM4; G1TS40; G1TU13; G1TZ76; G1U0Q2; G1U2Z9; G1U472; G1U7M4; P41567; P47813;		4kzy	41-115
Rabbit 40S ribosomal subunit in complex with mRNA, initiator tRNA and eIF1A	Heteromer B7NZS8; G1SFR8; G1SGX4; G1SIZ2; G1SJB4; G1SK22; G1SP51; G1SVB0; G1SZ47; G1T168; G1T8A2; G1TDB3; G1TFE8; G1TFM5; G1TG89; G1TGI6; G1TIB4; G1TJW1; G1TK17; G1TM55; G1TM82; G1TN62; G1TN72; G1TNM3; G1TPG3; G1TRM4; G1TS40; G1TU13; G1TZ76; G1U0Q2; G1U2Z9; G1U472; G1U7M4; P47813;		4kzz	41-115
Rabbit 40S ribosomal subunit in complex with eIF1.	Heteromer B7NZS8; G1SFR8; G1SGX4; G1SIZ2; G1SJB4; G1SK22; G1SP51; G1SVB0; G1SZ47; G1T168; G1T8A2; G1TDB3; G1TFE8; G1TFM5; G1TG89; G1TGI6; G1TIB4; G1TJW1; G1TK17; G1TM55; G1TM82; G1TN62; G1TN72; G1TNM3; G1TPG3; G1TRM4; G1TS40; G1TU13; G1TZ76; G1U0Q2; G1U2Z9; G1U472; G1U7M4; P41567;		4kzx	41-115
m48S late-stage initiation complex, purified from rabbit reticulocytes lysates, displaying eIF2 t...	Heteromer B7NZS8; G1SFR8; G1SGX4; G1SIZ2; G1SJB4; G1SK22; G1SP51; G1SRA8; G1SVB0; G1SZ47; G1T168; G1T1F0; G1T2G4; G1T8A2; G1TDB3; G1TFE8; G1TG89; G1TIB4; G1TJW1; G1TK17; G1TM55; G1TM82; G1TN62; G1TN72; G1TNM3; G1TPG3; G1TRM4; G1TS40; G1TU13; G1TUT9; G1TWL4; G1TZ76; G1U0Q2; G1U7M4; O75821; Q5IH81; Q97W59; U3KMN4;		5k0y	41-115
Human cap-dependent 48S pre-initiation complex	Heteromer P08708; P08865; P23396; P23588; P25398; P41091; P42677; P46781; P46782; P46783; P60228; P60866; P61247; P62081; P62241; P62244; P62249; P62263; P62266; P62269; P62273; P62277; P62280; P62701; P62753; P62841; P62847; P62851; P62857; P62861; P62979; P63244; Q7L2H7; Q9UBQ5; Q9Y262;		6fec	41-115
Mammalian 40S HCV-IRES complex	Heteromer P08708; P08865; P15880; P22090; P23396; P25398; P39019; P42677; P46781; P46782; P46783; P60866; P61247; P62081; P62241; P62244; P62249; P62263; P62266; P62269; P62273; P62277; P62280; P62753; P62841; P62847; P62851; P62854; P62857; P62861; P62979; P63220; P63244;	74×MG; 2×ZN;	5flx	41-113
Cryo-EM structure of a late human pre-40S ribosomal subunit - State B	Heteromer P08708; P08865; P15880; P39019; P42677; P46781; P46782; P61247; P62081; P62241; P62244; P62249; P62263; P62266; P62269; P62277; P62280; P62701; P62753; P62841; P62847; P62851; P62857; P62861; P63220; Q13895; Q2NL82; Q96GA3; Q9NRX1; Q9ULX3;		6g4s	42-113
Cryo-EM structure of a late human pre-40S ribosomal subunit - State E	Heteromer P08708; P08865; P15880; P23396; P25398; P39019; P42677; P46781; P46782; P46783; P60866; P61247; P62081; P62241; P62244; P62249; P62263; P62266; P62269; P62273; P62277; P62280; P62701; P62753; P62841; P62847; P62851; P62857; P62861; P62979; P63220; P63244; Q2NL82; Q96GA3; Q9NRX1; Q9ULX3;		6g53	42-113
Cryo-EM structure of a late human pre-40S ribosomal subunit - State A	Heteromer O43709; P08708; P39019; P42677; P46781; P46782; P61247; P62081; P62241; P62244; P62249; P62263; P62266; P62269; P62277; P62280; P62701; P62753; P62841; P62847; P62851; P62857; P62861; Q13895; Q2NL82; Q96GA3; Q9NRX1; Q9UI30;		6g4w	42-113
Cryo-EM structure of a late human pre-40S ribosomal subunit - State D	Heteromer P08708; P08865; P15880; P23396; P25398; P39019; P42677; P46781; P46782; P46783; P60866; P61247; P62081; P62241; P62244; P62249; P62263; P62266; P62269; P62273; P62277; P62280; P62701; P62753; P62841; P62847; P62851; P62857; P62861; P62979; P63220; P63244; Q2NL82; Q96GA3; Q9BVS4; Q9NRX1; Q9ULX3;		6g51	42-113
Cryo-EM structure of a late human pre-40S ribosomal subunit - Mature	Heteromer P08708; P08865; P15880; P23396; P25398; P39019; P42677; P46781; P46782; P46783; P60866; P61247; P62081; P62241; P62244; P62249; P62263; P62266; P62269; P62273; P62277; P62280; P62701; P62753; P62841; P62847; P62851; P62854; P62857; P62861; P62945; P62979; P63220; P63244;	3×ZN;	6g5h	42-113
Cryo-EM structure of a late human pre-40S ribosomal subunit - State R	Heteromer P08708; P08865; P15880; P23396; P25398; P39019; P42677; P46781; P46782; P46783; P60866; P61247; P62081; P62241; P62244; P62249; P62263; P62266; P62269; P62273; P62277; P62280; P62701; P62753; P62841; P62847; P62851; P62857; P62861; P62979; P63220; P63244; Q9BRS2; Q9NRX1; Q9ULX3;	3×ZN;	6g5i	42-113
Cryo-EM structure of a late human pre-40S ribosomal subunit - State C	Heteromer P08708; P08865; P15880; P25398; P39019; P42677; P46781; P46782; P61247; P62081; P62241; P62244; P62249; P62263; P62266; P62269; P62277; P62280; P62701; P62753; P62841; P62847; P62851; P62857; P62861; P62979; P63220; P63244; Q13895; Q2NL82; Q96GA3; Q9BVS4; Q9NRX1; Q9ULX3;	2×ZN;	6g18	42-113
Structure of the HCV IRES bound to the human ribosome	Heteromer P08708; P08865; P15880; P23396; P25398; P39019; P42677; P46781; P46782; P46783; P60866; P61247; P62081; P62241; P62244; P62249; P62263; P62266; P62269; P62273; P62277; P62280; P62701; P62753; P62841; P62847; P62851; P62854; P62857; P62861; P62945; P62979; P63220; P63244; P83731; P84098;	98×MG; 3×ZN;	5a2q	42-113
Human 40S-eIF2D-re-initiation complex	Heteromer P08708; P08865; P15880; P23396; P25398; P39019; P41214; P42677; P46781; P46782; P46783; P60866; P61247; P62081; P62241; P62244; P62249; P62263; P62266; P62269; P62273; P62277; P62280; P62701; P62753; P62841; P62847; P62851; P62854; P62857; P62861; P62945; P63220; P63244; Q5RKT7;	3×ZN;	5oa3	42-113
'Structure of a mammalian small ribosomal subunit in complex with the Israeli Acute Paralysis Vir...	Heteromer A0A087WNH4; B7NZS8; G1SFR8; G1SGX4; G1SIZ2; G1SJB4; G1SK22; G1SP51; G1SS70; G1SVB0; G1SWM1; G1SZ47; G1T3D8; G1T8A2; G1TDB3; G1TFE8; G1TFM5; G1TG89; G1TIB4; G1TJW1; G1TK17; G1TM55; G1TM82; G1TN62; G1TNM3; G1TPG3; G1TPV3; G1TRM4; G1TU13; G1TWL4; G1TZ76; G1U0Q2; G1U472; G1U7M4;		6p4h	44-113
'Structure of a mammalian small ribosomal subunit in complex with the Israeli Acute Paralysis Vir...	Heteromer A0A087WNH4; B7NZS8; G1SFR8; G1SGX4; G1SIZ2; G1SJB4; G1SK22; G1SP51; G1SS70; G1SVB0; G1SWM1; G1SZ47; G1T3D8; G1T8A2; G1TDB3; G1TFE8; G1TFM5; G1TG89; G1TIB4; G1TJW1; G1TK17; G1TM55; G1TM82; G1TN62; G1TNM3; G1TPG3; G1TPV3; G1TRM4; G1TU13; G1TWL4; G1TZ76; G1U0Q2; G1U472; G1U7M4;		6p4g	44-113

Seq Identity
Seq Similarity

SMTL Version
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A0A3Q7SHT8 (A0A3Q7SHT8_VULVU) Vulpes vulpes (Red fox)

40S ribosomal protein S25 UniProtKB InterPro Interactive Modelling

Experimental structures

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A0A3Q7SHT8 (A0A3Q7SHT8_VULVU) Vulpes vulpes (Red fox)

40S ribosomal protein S25 UniProtKBInterProInteractive Modelling

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Sequence Features

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Experimental structures

Background

Resolution

40S ribosomal protein S25 UniProtKB InterPro Interactive Modelling