A0A679LFL6 (A0A679LFL6_MYCBO) Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97)
DNA-directed RNA polymerase subunit omega UniProtKBInterProInteractive Modelling
110 aa; Sequence (Fasta) ;
16 identical sequences
It is possible new templates exist for this target since these models were created.
Available Structures
63 Experimental Structures
| Description | PDB ID | Oligo-state | Range | Ligands | ||
|---|---|---|---|---|---|---|
| Mycobacterium tuberculosis initial transcription complex comprising sigma H and 5'-OH RNA of 7 nt |
Heteromer P9WGH9; P9WGY5; P9WGY7; P9WGY9; P9WGZ1; | 2×ZN; 1×MG; | ||||
| Assess | ||||||
| Mycobacterium tuberculosis initial transcription complex comprising sigma H and 5'-OH RNA of 9 nt |
Heteromer P9WGH9; P9WGY5; P9WGY7; P9WGY9; P9WGZ1; | 2×ZN; 1×MG; | ||||
| Assess | ||||||
| Mycobacterium tuberculosis initial transcription complex comprising sigma H and 5'-OH RNA of 10 nt |
Heteromer P9WGH9; P9WGY5; P9WGY7; P9WGY9; P9WGZ1; | 2×ZN; 1×MG; | ||||
| Assess | ||||||
| Mycobacterium tuberculosis RNAP paused elongation complex with NusG transcription factor |
Heteromer P9WGY5; P9WGY7; P9WGY9; P9WGZ1; P9WIU9; | 2×ZN; 1×MG; | ||||
| Assess | ||||||
| Cryo-EM structure of Mycobacterium tuberculosis transcription initiation complex with transcription… |
Heteromer O53830; P9WGI1; P9WGY5; P9WGY7; P9WGY9; P9WGZ1; | 2×ZN; 1×MG; | ||||
| Assess | ||||||
| Mycobacterium tuberculosis transcription elongation complex with Bacillus subtilis NusG (EC_LG) |
Heteromer P9WGY5; P9WGY7; P9WGY9; P9WGZ1; Q06795; | 1×MG; 2×ZN; | ||||
| Assess | ||||||
| M. tuberculosis RNAP elongation complex with NusG |
Heteromer P9WGY5; P9WGY7; P9WGY9; P9WGZ1; P9WIU9; | 1×MG; 2×ZN; | ||||
| Assess | ||||||
| Mycobacterium tuberculosis transcription elongation complex with Bacillus subtilis NusG (EC_PG) |
Heteromer P9WGY5; P9WGY7; P9WGY9; P9WGZ1; Q06795; | 1×MG; 2×ZN; | ||||
| Assess | ||||||
| Mycobacterium tuberculosis WT RNAP transcription open promoter complex with WhiB7 promoter |
Heteromer P9WGI1; P9WGY5; P9WGY7; P9WGY9; P9WGZ1; P9WHJ5; P9WJG3; | 2×ZN; 1×MG; | ||||
| Assess | ||||||
| Mycobacterium tuberculosis paused transcription complex with Bacillus subtilis NusG |
Heteromer P9WGY5; P9WGY7; P9WGY9; P9WGZ1; Q06795; | 1×MG; 2×ZN; | ||||
| Assess | ||||||
| Mycobacterium tuberculosis WT RNAP transcription initiation intermediate structure with Sorangicin |
Heteromer P9WGI1; P9WGY5; P9WGY7; P9WGY9; P9WGZ1; P9WHJ5; P9WJG3; | 1×SRN; 2×ZN; 1×MG; | ||||
| Assess | ||||||
| Mycobacterium tuberculosis RNAP S456L mutant transcription initiation intermediate structure with S… |
Heteromer P9WGI1; P9WGY5; P9WGY7; P9WGY9; P9WGZ1; P9WHJ5; P9WJG3; | 1×SRN; 2×ZN; 1×MG; | ||||
| Assess | ||||||
| Mycobacterium tuberculosis RNAP Holo/RbpA in relaxed state |
Heteromer P9WGI1; P9WGY5; P9WGY7; P9WGY9; P9WGZ1; P9WHJ5; | 2×ZN; 1×MG; | ||||
| Assess | ||||||
| M. tuberculosis RNAP pause escaped complex with Bacillus subtilis NusG and GMPCPP |
Heteromer P9WGY5; P9WGY7; P9WGY9; P9WGZ1; Q06795; | 1×G2P; 2×MG; 2×ZN; | ||||
| Assess | ||||||
| Mtb RNAP Holo/RbpA/Fidaxomicin/upstream fork DNA |
Heteromer P9WGI1; P9WGY5; P9WGY7; P9WGY9; P9WGZ1; P9WHJ5; | 1×FI8; 2×ZN; 1×MG; | ||||
| Assess | ||||||
| Mycobacterium tuberculosis WT RNAP transcription closed promoter complex with WhiB7 transcription f… |
Heteromer P9WGI1; P9WGY5; P9WGY7; P9WGY9; P9WGZ1; P9WHJ5; P9WJG3; Q6MX01; | 2×ZN; 1×MG; 1×SF4; | ||||
| Assess | ||||||
| Cryo-EM structure of Mycobacterium tuberculosis RNA polymerase holoenzyme octamer comprising sigma … |
Heteromer P9WGI5; P9WGY5; P9WGY7; P9WGY9; P9WGZ1; | 16×ZN; 8×MG; | ||||
| Assess | ||||||
| Mycobacterium tuberculosis RNAP promoter unwinding intermediate complex with RbpA/CarD and AP3 prom… |
Heteromer P9WGI1; P9WGY5; P9WGY7; P9WGY9; P9WGZ1; P9WHJ5; P9WJG3; | 2×ZN; 1×MG; | ||||
| Assess | ||||||
| Mtb RNAP Holo/RbpA/double fork DNA -closed clamp |
Heteromer P9WGI1; P9WGY5; P9WGY7; P9WGY9; P9WGZ1; P9WHJ5; | 2×ZN; 1×MG; | ||||
| Assess | ||||||
| Cryo-EM structure of Mycobacterium tuberculosis RNA polymerase holoenzyme dimer comprising sigma fa… |
Heteromer P9WGI5; P9WGY5; P9WGY7; P9WGY9; P9WGZ1; | 4×ZN; 2×MG; | ||||
| Assess | ||||||
| Mycobacterium tuberculosis WT RNAP transcription open promoter complex with WhiB7 transcription fac… |
Heteromer P9WGI1; P9WGY5; P9WGY7; P9WGY9; P9WGZ1; P9WHJ5; P9WJG3; Q6MX01; | 2×ZN; 1×MG; 1×SF4; | ||||
| Assess | ||||||
| Mycobacterium tuberculosis RNAP paused elongation complex |
Heteromer P9WGY5; P9WGY7; P9WGY9; P9WGZ1; | 2×ZN; 1×MG; | ||||
| Assess | ||||||
| Mycobacterium tuberculosis RNAP Holo/RbpA/Fidaxomicin |
Heteromer P9WGI1; P9WGY5; P9WGY7; P9WGY9; P9WGZ1; P9WHJ5; | 2×ZN; 1×MG; 1×FI8; | ||||
| Assess | ||||||
| Mycobacterium tuberculosis RNAP open promoter complex with RbpA/CarD and AP3 promoter |
Heteromer P9WGI1; P9WGY5; P9WGY7; P9WGY9; P9WGZ1; P9WHJ5; P9WJG3; | 2×ZN; 1×MG; | ||||
| Assess | ||||||
| Mycobacterium tuberculosis RNAP S456L mutant open promoter complex |
Heteromer P9WGI1; P9WGY5; P9WGY7; P9WGY9; P9WGZ1; P9WHJ5; P9WJG3; | 2×ZN; 1×MG; | ||||
| Assess | ||||||
| M. tuberculosis RNAP paused complex with B. subtilis NusG and GMPCPP |
Heteromer P9WGY5; P9WGY7; P9WGY9; P9WGZ1; Q06795; | 1×MG; 2×ZN; 1×G2P; | ||||
| Assess | ||||||
| Mycobacterium tuberculosis WT RNAP transcription open promoter complex with Sorangicin |
Heteromer P9WGI1; P9WGY5; P9WGY7; P9WGY9; P9WGZ1; P9WHJ5; P9WJG3; | 1×SRN; 2×ZN; 1×MG; | ||||
| Assess | ||||||
| M. tuberculosis RNAP elongation complex with NusG and CMPCPP |
Heteromer P9WGY5; P9WGY7; P9WGY9; P9WGZ1; P9WIU9; | 1×2TM; 2×MG; 2×ZN; | ||||
| Assess | ||||||
| Mycobacterium tuberculosis RNAP with RbpA/us fork and Corallopyronin |
Heteromer P9WGI1; P9WGY5; P9WGY7; P9WGY9; P9WGZ1; P9WHJ5; | 2×ZN; 1×MG; 1×C0L; | ||||
| Assess | ||||||
| Mycobacterium tuberculosis RNAP promoter unwinding intermediate complex with RbpA/CarD and AP3 prom… |
Heteromer P9WGI1; P9WGY5; P9WGY7; P9WGY9; P9WGZ1; P9WHJ5; P9WJG3; | 1×C0L; 2×ZN; 1×MG; | ||||
| Assess | ||||||
| Single particle cryo em structure of Mycobacterium tuberculosis RNA polymerase in complex with Fida… |
Heteromer P9WGI1; P9WGY5; P9WGY7; P9WGY9; P9WGZ1; | 2×ZN; 1×MG; 1×FI8; | ||||
| Assess | ||||||
| Cryo-EM structure of Mycobacterium tuberculosis RNA polymerase holoenzyme comprising sigma factor S… |
Heteromer P9WGI5; P9WGY5; P9WGY7; P9WGY9; P9WGZ1; | 2×ZN; 1×MG; | ||||
| Assess | ||||||
| Mycobacterium tuberculosis RNA polymerase holoenzyme with ECF sigma factor sigma H |
Heteromer P9WGH9; P9WGY5; P9WGY7; P9WGY9; P9WGZ1; | 2×ZN; | ||||
| Assess | ||||||
| Mycobacterium tuberculosis RNA polymerase transcription initiation complex with ECF sigma factor si… |
Heteromer P9WGH9; P9WGY5; P9WGY7; P9WGY9; P9WGZ1; | 2×ZN; | ||||
| Assess | ||||||
| Mycobacterium tuberculosis RNA polymerase transcription initiation open complex with a chimeric ECF… |
Heteromer P9WGG7; P9WGH9; P9WGY5; P9WGY7; P9WGY9; P9WGZ1; | 2×ZN; 1×MG; | ||||
| Assess | ||||||
| Mycobacterium tuberculosis RNAP elongation complex |
Heteromer P9WGY5; P9WGY7; P9WGY9; P9WGZ1; | 2×ZN; 1×MG; | ||||
| Assess | ||||||
| Mycobacterium tuberculosis RNAP paused elongation complex with Escherichia coli NusG transcription … |
Heteromer P0AFG0; P9WGY5; P9WGY7; P9WGY9; P9WGZ1; | 2×ZN; 1×MG; | ||||
| Assess | ||||||
| Mycobacterium tuberculosis RNAP elongation complex with NusG transcription factor |
Heteromer P9WGY5; P9WGY7; P9WGY9; P9WGZ1; P9WIU9; | 2×ZN; 1×MG; | ||||
| Assess | ||||||
| Mycobacterium tuberculosis initial transcription complex comprising sigma H and 5'-OH RNA of 5 nt |
Heteromer P9WGH9; P9WGY5; P9WGY7; P9WGY9; P9WGZ1; | 2×ZN; 1×MG; | ||||
| Assess | ||||||
| Crystal structure of Mycobacterium tuberculosis transcription initiation complex(ECF sigma factor L… |
Heteromer P9WGH5; P9WGY5; P9WGY7; P9WGY9; P9WGZ1; | 2×ZN; | ||||
| Assess | ||||||
| Crystal structure of MTB sigma L transcription initiation complex with 9 nt long RNA primer |
Heteromer P9WGH5; P9WGY5; P9WGY7; P9WGY9; P9WGZ1; | |||||
| Assess | ||||||
| Mycobacterium tuberculosis RNA polymerase sigma L holoenzyme open promoter complex containing TNP-2… |
Heteromer P9WGH5; P9WGY5; P9WGY7; P9WGY9; P9WGZ1; | 1×7US; | ||||
| Assess | ||||||
| Crystal structure of Mycobacterium tuberculosis transcription initiation complex containing 3 nt of… |
Heteromer P9WGI1; P9WGY5; P9WGY7; P9WGY9; P9WGZ1; | 2×ZN; 1×MG; | ||||
| Assess | ||||||
| Crystal structure of MTB sigma L transcription initiation complex with 5 nt long RNA primer |
Heteromer P9WGH5; P9WGY5; P9WGY7; P9WGY9; P9WGZ1; | |||||
| Assess | ||||||
| Crystal structure of Mycobacterium tuberculosis transcription initiation complex containing 3nt RNA… |
Heteromer P9WGI1; P9WGY5; P9WGY7; P9WGY9; P9WGZ1; | 1×RFP; 2×ZN; 1×MG; | ||||
| Assess | ||||||
| Crystal structure of Mycobacterium tuberculosis transcription initiation complex(ECF sigma factor L… |
Heteromer P9WGH5; P9WGY5; P9WGY7; P9WGY9; P9WGZ1; | 2×ZN; | ||||
| Assess | ||||||
| Crystal structure of MTB sigma L transcription initiation complex with 6 nt long RNA primer |
Heteromer P9WGH5; P9WGY5; P9WGY7; P9WGY9; P9WGZ1; | |||||
| Assess | ||||||
| Crystal structure of Mycobacterium tuberculosis transcription initiation complex(ECF sigma factor L… |
Heteromer P9WGH5; P9WGY5; P9WGY7; P9WGY9; P9WGZ1; | 1×MG; 2×ZN; | ||||
| Assess | ||||||
| Crystal structure of Mycobacterium tuberculosis transcription initiation complex(ECF selenomethioni… |
Heteromer P9WGH5; P9WGY5; P9WGY7; P9WGY9; P9WGZ1; | 2×ZN; | ||||
| Assess | ||||||
| Crystal structure of Mycobacterium tuberculosis transcription initiation complex containing 2ntRNA … |
Heteromer P9WGI1; P9WGY5; P9WGY7; P9WGY9; P9WGZ1; | 1×RFP; 2×ZN; 1×MG; | ||||
| Assess | ||||||
| Mycobacterium tuberculosis RNA polymerase sigma A holoenzyme open promoter complex containing UMN-7 |
Heteromer P9WGI1; P9WGY5; P9WGY7; P9WGY9; P9WGZ1; | 1×KYO; 2×ZN; 1×MG; | ||||
| Assess | ||||||
| Crystal structure of Mycobacterium tuberculosis transcription initiation complex(ECF sigma factor L… |
Heteromer P9WGH5; P9WGY5; P9WGY7; P9WGY9; P9WGZ1; | 2×ZN; | ||||
| Assess | ||||||
| Crystal structure of Mycobacterium tuberculosis transcription initiation complex |
Heteromer P9WGI1; P9WGY5; P9WGY7; P9WGY9; P9WGZ1; | 2×ZN; 1×MG; | ||||
| Assess | ||||||
| Crystal structure of Mycobacterium tuberculosis transcription initiation complex in complex with D-… |
Heteromer P9WGI1; P9WGY5; P9WGY7; P9WGY9; P9WGZ1; | 1×RFP; 2×ZN; 1×MG; 1×88G; | ||||
| Assess | ||||||
| Crystal structure of Mycobacterium tuberculosis transcription initiation complex containing 4nt RNA… |
Heteromer P9WGI1; P9WGY5; P9WGY7; P9WGY9; P9WGZ1; | 1×RFP; 2×ZN; 1×MG; | ||||
| Assess | ||||||
| Crystal structure of Mycobacterium tuberculosis transcription initiation complex in complex with D-… |
Heteromer P9WGI1; P9WGY5; P9WGY7; P9WGY9; P9WGZ1; | 2×ZN; 1×MG; 1×88G; | ||||
| Assess | ||||||
| Crystal structure of Mycobacterium tuberculosis transcription initiation complex containing 4nt RNA |
Heteromer P9WGI1; P9WGY5; P9WGY7; P9WGY9; P9WGZ1; | 2×ZN; 1×MG; | ||||
| Assess | ||||||
| Crystal structure of Mycobacterium tuberculosis transcription initiation complex in complex with Ri… |
Heteromer P9WGI1; P9WGY5; P9WGY7; P9WGY9; P9WGZ1; | 1×RFP; 2×ZN; 1×MG; | ||||
| Assess | ||||||
| Crystal structure of Mycobacterium tuberculosis transcription initiation complex in complex with D-… |
Heteromer P9WGI1; P9WGY5; P9WGY7; P9WGY9; P9WGZ1; | 2×ZN; 1×MG; 1×88D; | ||||
| Assess | ||||||
| Crystal structure of Mycobacterium tuberculosis transcription initiation complex containing 2nt RNA |
Heteromer P9WGI1; P9WGY5; P9WGY7; P9WGY9; P9WGZ1; | 2×ZN; 1×MG; | ||||
| Assess | ||||||
| Protomeric substructure from an octameric assembly of M. tuberculosis RNA polymerase in complex wit… |
Heteromer P9WGI5; P9WGY5; P9WGY7; P9WGY9; P9WGZ1; | 2×ZN; 1×MG; | ||||
| Assess | ||||||
| Cryo-EM structure of Mycobacterium tuberculosis RNA polymerase core |
Heteromer P9WGY5; P9WGY7; P9WGY9; P9WGZ1; | 2×ZN; 1×MG; | ||||
| Assess | ||||||
| Mycobacterium tuberculosis transcription initiation complex with ECF sigma factor sigma H and 6nt R… |
Heteromer P9WGH9; P9WGY5; P9WGY7; P9WGY9; P9WGZ1; | 2×ZN; 1×MG; | ||||
| Assess | ||||||
1 SWISS-MODEL model
| Template | Oligo-state | QMEANDisCo | Range | Ligands | Trg-Tpl Seq id (%) | |
|---|---|---|---|---|---|---|
| 7p5x.1.E | monomer | 0.77 | 81.31 | |||
| Assess | ||||||