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A0A6G6XH68 (A0A6G6XH68_9CAUD) Escherichia phage F2

DNA-directed DNA polymerase UniProtKBAFDB90v4InterProInteractive Modelling

903 aa; Sequence (Fasta) ; 3 identical sequences: Escherichia phage vB_EcoM-ZQ3: A0A8F3C7N1; Escherichia phage PHB12: A0A482IFD9; Escherichia phage RB69: Q38087

Available Structures

121 Experimental Structures

DescriptionPDB IDOligo-stateRangeLigands
RB69 single-stranded DNA binding protein-DNA polymerase fusion Heteromer
Q38087; Q7Y265;
1-903
GDP;ZN;
Assess
SLIDING CLAMP, DNA POLYMERASE Heteromer
O80164; Q38087;
893-903
Assess
Crystal structure of replisomal dimer of DNA polymerase from bacteriophage RB69 with DNA duplexeshomo-2-mer1-901
DUP;CA;5GP;MG;
Assess
RB69 DNA Polymerase Ternary Complex with dCTP Opposite dG at 1.8 angstrom resolutionmonomer1-903
DCP;CA;
Assess
RB69 DNA Polymerase Triple Mutant (L561A/S565G/Y567A) Ternary Complex with dUpNpp and a Deoxy-termi…monomer1-903
DUP;MG;
Assess
RB69 DNA Polymerase (Y567A) Ternary Complex with dTTP Opposite dGmonomer1-903
TTP;CA;
Assess
RB69 DNA Polymerase Triple Mutant(L561A/S565G/Y567A) ternary complex with dUpNpp and a dideoxy-term…monomer1-903
CA;DUP;
Assess
RB69 DNA Polymerase Ternary Complex with dATP Opposite an Abasic Site and ddA/dT as the Penultimate…monomer1-903
DTP;CA;
Assess
RB69 DNA Polymerase (L561A/S565G/Y567A) Ternary Complex with dATP Opposite Difluorotoluene Nucleosi…monomer1-903
DTP;CA;
Assess
DNA Polymerase(L561A/S565G/Y567A) Ternary Complex with dUpNpp Opposite dA (Mn2+)monomer1-903
DUP;MN;
Assess
RB69 DNA Polymerase (Y567A) Ternary Complex with dCTP Opposite dGmonomer1-903
DCP;CA;
Assess
RB69 DNA Polymerase (L561A/S565G/Y567A) Ternary Complex with dCTP Opposite dG in the presence of Mg…monomer1-903
DCP;MG;
Assess
RB69 DNA Polymerase (S565G/Y567A) Ternary Complex with dCTP Opposite dGmonomer1-903
CA;DCP;
Assess
RB69 DNA Polymerase (Y567A) Ternary Complex with dATP Opposite Guanidinohydantoinmonomer1-903
DTP;CA;
Assess
RB69 DNA polymerase ternary complex with dG/dT at position n-4 of primer/tempLate duplexmonomer1-903
ATP;CA;
Assess
RB69 DNA Polymerase Ternary Complex with dQTP Opposite dTmonomer1-903
QTP;CA;
Assess
RB69 DNA Polymerase Ternary Complex with dGTP Opposite an Abasic Site and ddA/dT as the Penultimate…monomer1-903
DGT;CA;
Assess
RB69 DNA Polymerase Ternary Complex with dCTP Opposite an Abasic Site and ddA/dT as the Penultimate…monomer1-903
DCP;CA;
Assess
RB69 DNA Polymerase (Y567A) ternary complex with dCTP Opposite 7,8-Dihydro-8-oxoguaninemonomer1-903
CTP;CA;
Assess
RB69 DNA polymerase ternary complex with dT/dG at position n-3 of primer/template duplexmonomer1-903
ATP;CA;
Assess
RB69 DNA polymerase ternary complex with dT/dG at position n-1 of primer/template duplexmonomer1-903
ATP;CA;
Assess
RB69 DNA Polymerase (L561A/S565G/Y567A) Ternary Complex with dTTP Opposite dTmonomer1-903
TTP;CA;
Assess
RB69 DNA polymerase ternary complex with dT/dG at position n-4 of primer/template duplexmonomer1-903
ATP;CA;
Assess
Crystal structure of a replicative DNA polymerase bound to the oxidized guanine lesion guanidinohyd…monomer1-903
Assess
RB69 DNA polymerase ternary complex with dG/dT at position n-3 of primer/tempLate duplexmonomer1-903
ATP;CA;
Assess
RB69 DNA Polymerase (L561A/S565G/Y567A) Ternary Complex with dCTP Opposite Difluorotoluene Nucleosi…monomer1-903
DCP;CA;
Assess
RB69 DNA polymerase ternary complex with dcTP/dCmonomer1-903
DCP;CA;
Assess
High-Resolution Structure of Apo RB69 DNA Polymerasemonomer1-903
K;GMP;
Assess
RB69 DNA Polymerase (Y567A) ternary complex with dATP Opposite 7,8-dihydro-8-oxoguaninemonomer1-903
DTP;CA;
Assess
RB69 DNA Polymerase (Y567A) Ternary Complex with dCTP Opposite 2AP (GC rich sequence)monomer1-903
DCP;CA;
Assess
RB69 DNA Polymerase Triple Mutant(L561A/S565G/Y567A) Ternary Complex with dUpNpp and a Deoxy-termin…monomer1-903
DUP;CA;
Assess
Crystal structure of the beta hairpin loop deletion variant of RB69 gp43 in complex with DNA contai…monomer1-903
Assess
DNA Polymerase(L415A/L561A/S565G/Y567A) Ternary Complex with dUpCpp Opposite dA (Ca2+)monomer1-903
UPC;CA;
Assess
RB69 DNA Polymerase (S565G/Y567A) Ternary Complex with dTTP Opposite dGmonomer1-903
TTP;CA;
Assess
Crystal structure of the D714A mutant of RB69 DNA polymerasemonomer1-903
GMP;SO4;CL;
Assess
Triple Mutant APO structuremonomer1-903
SO4;GMP;
Assess
Crystal Structure of a replicative DNA polymerase bound to DNA containing Thymine Glycolmonomer1-903
Assess
Closed binary complex of an RB69 gp43 fingers domain mutant complexed with an acyclic GMP terminate…monomer1-903
MG;
Assess
Closed ternary complex of an RB69 gp43 fingers domain mutant complexed with an acyclic GMP terminat…monomer1-903
PPF;MG;
Assess
Crystal structure of Enterobacteria phage RB69 gp43 DNA polymerase complexed with tetrahydrofuran c…monomer1-903
3DR;DOC;CA;
Assess
CRYSTAL STRUCTURE OF A REPLICATION FORK DNA POLYMERASE EDITING COMPLEX AT 2.7 A RESOLUTIONmonomer1-903
CA;GDP;
Assess
5-hydroxycytosine paired with dAMP in RB69 gp43monomer1-903
SO4;
Assess
Crystal structure of RB69 gp43 in complex with DNA with dATP opposite dTMPmonomer1-903
MG;DTP;
Assess
Crystal structure of RB69 gp43 in complex with DNA with dAMP opposite an abasic site analog in a 21…monomer1-903
Assess
DNA POLYMERASE FROM BACTERIOPHAGE RB69monomer1-903
5GP;
Assess
5-hydroxycytosine paired with dGMP in RB69 gp43monomer1-903
SO4;
Assess
Crystal Structure of a replicative DNA polymerase bound to DNA containing Thymine Glycolmonomer1-903
Assess
Crystal structure of RB69 gp43 in complex with DNA with 5-NIMP opposite an abasic site analogmonomer1-903
N5P;
Assess
Crystal structure of RB69 gp43 in complex with DNA with 5-NITP opposite an abasic site analogmonomer1-903
MG;N5P;
Assess
5-fluorocytosine paired with dAMP in RB69 gp43monomer1-903
SO4;
Assess
Crystal structure of RB69 gp43 with DNA and dATP opposite 8-oxoGmonomer1-903
DTP;MN;SO4;
Assess
5-fluorocytosine paired with ddGMP in RB69 gp43monomer1-903
SO4;
Assess
DNA POLYMERASE FROM BACTERIOPHAGE RB69monomer1-903
GMP;
Assess
RB69 DNA Polymerase (L561A/S565G/Y567A) Ternary Complex with dGTP Opposite Difluorotoluene Nucleosi…monomer1-902
DGT;CA;
Assess
Ternary complex of rb69 mutant L415F with a ribonucleotide at -1 positionmonomer1-902
TTP;CA;NA;
Assess
RB69 DNA Polymerase Ternary Complex with dTTP Opposite 2AP (AT rich sequence)monomer1-902
TTP;CA;
Assess
Ternary complex of RB69 mutant L415F with a ribonucleotide at 0 positionmonomer1-902
CA;TTP;NA;CL;
Assess
Ternary complex of RB69 mutant L415F wit DUMPNPPmonomer1-902
CA;DUP;NA;
Assess
RB69 DNA Polymerase Ternary Complex with dTTP Opposite 2AP (GC rich sequence)monomer1-902
TTP;CA;
Assess
Ternary complex of rb69 mutant L415F with ribonucleotide at -3 positionmonomer1-902
TTP;CA;NA;
Assess
RB69 DNA Polymerase Ternary Complex with dATP Opposite dT with 3-Deaza-adenine at the N-3 Position …monomer1-902
DTP;CA;
Assess
Ternary complex of RB69 mutant L415F with ribonucleotide at -2 positionmonomer1-902
TTP;CA;NA;
Assess
Ternary complex of the L415F mutant RB69 exo(-)polymerasemonomer1-902
CA;NA;TTP;GOL;
Assess
Ternary complex of rb69 mutant l415f with ribonucleotides at -1 and -2 positionmonomer1-902
TTP;CA;NA;PO4;
Assess
Crystal structure of RB69 GP43 in complex with DNA containing Thymine Glycolmonomer1-902
Assess
Crystal structure of RB69 GP43 in complex with DNA containing an abasic site analogmonomer1-902
Assess
Crystal Structure of a replicative DNA polymerase bound to DNA containing Thymine Glycolmonomer1-902
Assess
Crystal Structure of a replicative DNA polymerase bound to DNA containing Thymine Glycolmonomer1-902
Assess
RB69 DNA Polymerase (L561A/S565G/Y567A) Ternary Complex with dGTP Opposite dTmonomer1-901
DGT;CA;
Assess
RB69 DNA Polymerase L415K Ternary Complexmonomer1-901
TTP;CA;
Assess
RB69 DNA Polymerase (L561A/S565G/Y567A) Ternary Complex with dCTP Opposite dTmonomer1-901
DCP;CA;
Assess
RB69 DNA Polymerase (L561A/S565G/Y567A) Ternary Complex with dTTP Opposite Difluorotoluene Nucleosi…monomer1-901
TTP;CA;
Assess
RB69 DNA Polymerase L415A Ternary Complexmonomer1-901
TTP;CA;
Assess
RB69 DNA Polymerase Ternary Complex with dUpCpp Opposite dAmonomer1-901
DUP;CA;
Assess
RB69 DNA Polymerase Ternary Complex with dTTP Opposite an Abasic Site and ddC/dG as the Penultimate…monomer1-901
TTP;CA;
Assess
RB69 DNA polymerase ternary complex with dG/dT at position n-2 of primer/tempLate duplexmonomer1-901
ATP;CA;
Assess
RB69 DNA Polymerase (L561A/S565G/Y567A) Ternary Complex with dDTP Opposite dTmonomer1-901
DTP;CA;
Assess
RB69 DNA Polymerase Ternary Complex with dGTP Opposite an Abasic Site and ddC/dG as the Penultimate…monomer1-901
DGT;CA;
Assess
RB69 DNA polymerase ternary complex with dG/dT at position n-1 of primer/template duplexmonomer1-901
ATP;CA;
Assess
RB69 DNA polymerase ternary complex with dGTP/dAmonomer1-901
DGT;CA;
Assess
RB69 DNA Polymerase Ternary Complex containing dUpNppmonomer1-901
DUP;CA;
Assess
RB69 DNA Polymerase (Y567A) Ternary Complex with dATP Opposite 3tComonomer1-901
ATP;CA;
Assess
RB69 DNA polymerase ternary complex with dG/dT at position n-5 of primer/template duplexmonomer1-901
ATP;CA;
Assess
RB69 DNA polymerase ternary complex with dGTP/dTmonomer1-901
DGT;CA;
Assess
RB69 DNA polymerase ternary complex with dGTP/dGmonomer1-901
DGT;CA;
Assess
RB69 DNA Polymerase Ternary Complex with dTTP Opposite an Abasic Site and ddT/dA as the Penultimate…monomer1-901
TTP;CA;
Assess
RB69 DNA polymerase ternary complex with dT/dG at position n-2 of primer/template duplexmonomer1-901
ATP;CA;
Assess
RB69 DNA Polymerase (Y567A) Ternary Complex with dGT Opposite 3tComonomer1-901
DGT;CA;
Assess
RB69 DNA Polymerase Ternary Complex with dCTP Opposite an Abasic Site and ddG/dC as the Penultimate…monomer1-901
DCP;CA;
Assess
RB69 DNA Polymerase Ternary Complex with dCTP Opposite an Abasic Site and ddC/dG as the Penultimate…monomer1-901
DCP;CA;
Assess
RB69 DNA polymerase ternary complex with dTTP/dTmonomer1-901
TTP;CA;
Assess
RB69 DNA polymerase ternary complex with dTTP/dGmonomer1-901
TTP;CA;
Assess
RB69 DNA polymerase ternary complex with dTTP/dCmonomer1-901
TTP;CA;
Assess
RB69 DNA polymerase ternary complex with dATP/dAmonomer1-901
DTP;CA;
Assess
RB69 DNA Polymerase Ternary Complex with dDTP Opposite dT with 3-Deaza-adenine at the N-1 Position …monomer1-901
DTP;CA;
Assess
RB69 DNA polymerase ternary complex with dCTP/dAmonomer1-901
DCP;CA;
Assess
RB69 DNA Polymerase L415M Ternary Complexmonomer1-901
ATP;CA;
Assess
RB69 DNA polymerase ternary complex with dATP/dCmonomer1-901
DTP;CA;
Assess
RB69 DNA Polymerase Ternary Complex with dATP Opposite an Abasic Site and ddC/dG as the Penultimate…monomer1-901
DTP;CA;
Assess
RB69 DNA Polymerase L415G Ternary Complexmonomer1-901
ATP;CA;
Assess
RB69 DNA polymerase ternary complex with dATP/dTmonomer1-901
DTP;CA;
Assess
RB69 DNA polymerase ternary complex with dGTP/dCmonomer1-901
DGT;CA;
Assess
RB69 DNA polymerase ternary complex with dATP/dGmonomer1-901
DTP;CA;
Assess
RB69 DNA Polymerase(L415A/L561A/S565G/Y567A) Ternary Complex with dUpCpp Opposite dAmonomer1-901
UPC;MG;
Assess
RB69 DNA Polymerase Ternary Complex with dATP Opposite dTmonomer1-901
DTP;CA;
Assess
RB69 DNA polymerase ternary complex with dCTP/dTmonomer1-901
DCP;CA;
Assess
RB69 DNA polymerase ternary complex with dT/dG at position n-5 of primer/template duplexmonomer1-901
ATP;CA;
Assess
RB69 DNA Polymerase (Y567A) Ternary Complex with dATP Opposite Difluorotoluene Nucleosidemonomer1-901
ATP;CA;
Assess
RB69 DNA Polymerase Triple Mutant (L561A/S565G/Y567A) Ternary Complex with dUpNpp and a Deoxy-termi…monomer1-901
DUP;MN;
Assess
Structure of the replicating complex of a POL Alpha family DNA Polymerase, ternary complex 2monomer1-901
CA;CL;TTP;
Assess
Ternary complex of rb69 mutant L415F with ribonucleotides at 0 and -1 positionmonomer1-901
TTP;CA;NA;GOL;
Assess
Structure of the replicating complex of a POL Alpha family DNA Polymerase, ternary complex 1monomer1-901
CA;CL;TTP;
Assess
Crystal structure of the ternary complex of the D714A mutant of RB69 DNA polymerasemonomer1-901
XG4;CA;SO4;GOL;NA;
Assess
Structure of the Replicating Complex of a Pol Alpha Family DNA Polymerasemonomer1-901
CA;TTP;
Assess
RB69 DNA polymerase ternary complex with dTTP/dAmonomer1-900
TTP;CA;
Assess
RB69 DNA polymerase ternary complex with dCTP/dGmonomer1-900
DCP;CA;
Assess
RB69 DNA Polymerase (Y567A) Ternary Complex with dTTP Opposite 2AP (GC rich sequence)monomer1-900
TTP;CA;
Assess
CRYSTAL STRUCTURE OF ENTEROBACTERIA PHAGE RB69 GP43 DNA POLYMERASE COMPLEXED WITH 8-OXOGUANOSINE CO…monomer1-899
DCP;CA;
Assess
RB69 DNA Polymerase (Y567A) Ternary Complex with dCTP Opposite 2AP (AT rich sequence)monomer1-897
DCP;CA;
Assess
Crystal structure of the ternary complex of the D714A mutant of RB69 DNA polymerasemonomer1-895
XG4;CA;NA;
Assess
RB69 DNA Polymerase (Y567A) Ternary Complex with dTTP Opposite 2AP (AT rich sequence)monomer1-895
TTP;CA;
Assess

1 SWISS-MODEL model

TemplateOligo-stateQMEANDisCoRangeLigandsTrg-Tpl Seq id (%)
3uiq.1.Amonomer0.881-901
CA;100.00
Assess