A0A6G6XH68 (A0A6G6XH68_9CAUD) Escherichia phage F2
DNA-directed DNA polymerase UniProtKBAFDB90v4InterProInteractive Modelling
903 aa; Sequence (Fasta) ;
3 identical sequences: Escherichia phage vB_EcoM-ZQ3: A0A8F3C7N1; Escherichia phage PHB12: A0A482IFD9; Escherichia phage RB69: Q38087
It is possible new templates exist for this target since these models were created.
Available Structures
121 Experimental Structures
Description | PDB ID | Oligo-state | Range | Ligands | ||
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RB69 single-stranded DNA binding protein-DNA polymerase fusion |
Heteromer Q38087; Q7Y265; | 1×GDP; 1×ZN; | ||||
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SLIDING CLAMP, DNA POLYMERASE |
Heteromer O80164; Q38087; | |||||
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Crystal structure of replisomal dimer of DNA polymerase from bacteriophage RB69 with DNA duplexes | homo-2-mer | 1×DUP; 2×CA; 2×5GP; 1×MG; | ||||
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RB69 DNA Polymerase Ternary Complex with dCTP Opposite dG at 1.8 angstrom resolution | monomer | 1×DCP; 3×CA; | ||||
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RB69 DNA Polymerase Triple Mutant (L561A/S565G/Y567A) Ternary Complex with dUpNpp and a Deoxy-termi… | monomer | 1×DUP; 1×MG; | ||||
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RB69 DNA Polymerase (Y567A) Ternary Complex with dTTP Opposite dG | monomer | 1×TTP; 8×CA; | ||||
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RB69 DNA Polymerase Triple Mutant(L561A/S565G/Y567A) ternary complex with dUpNpp and a dideoxy-term… | monomer | 7×CA; 1×DUP; | ||||
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RB69 DNA Polymerase Ternary Complex with dATP Opposite an Abasic Site and ddA/dT as the Penultimate… | monomer | 1×DTP; 5×CA; | ||||
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RB69 DNA Polymerase (L561A/S565G/Y567A) Ternary Complex with dATP Opposite Difluorotoluene Nucleosi… | monomer | 1×DTP; 4×CA; | ||||
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DNA Polymerase(L561A/S565G/Y567A) Ternary Complex with dUpNpp Opposite dA (Mn2+) | monomer | 1×DUP; 5×MN; | ||||
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RB69 DNA Polymerase (Y567A) Ternary Complex with dCTP Opposite dG | monomer | 1×DCP; 7×CA; | ||||
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RB69 DNA Polymerase (L561A/S565G/Y567A) Ternary Complex with dCTP Opposite dG in the presence of Mg… | monomer | 1×DCP; 2×MG; | ||||
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RB69 DNA Polymerase (S565G/Y567A) Ternary Complex with dCTP Opposite dG | monomer | 5×CA; 1×DCP; | ||||
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RB69 DNA Polymerase (Y567A) Ternary Complex with dATP Opposite Guanidinohydantoin | monomer | 1×DTP; 4×CA; | ||||
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RB69 DNA polymerase ternary complex with dG/dT at position n-4 of primer/tempLate duplex | monomer | 1×ATP; 5×CA; | ||||
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RB69 DNA Polymerase Ternary Complex with dQTP Opposite dT | monomer | 1×QTP; 5×CA; | ||||
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RB69 DNA Polymerase Ternary Complex with dGTP Opposite an Abasic Site and ddA/dT as the Penultimate… | monomer | 1×DGT; 5×CA; | ||||
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RB69 DNA Polymerase Ternary Complex with dCTP Opposite an Abasic Site and ddA/dT as the Penultimate… | monomer | 1×DCP; 5×CA; | ||||
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RB69 DNA Polymerase (Y567A) ternary complex with dCTP Opposite 7,8-Dihydro-8-oxoguanine | monomer | 1×CTP; 4×CA; | ||||
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RB69 DNA polymerase ternary complex with dT/dG at position n-3 of primer/template duplex | monomer | 1×ATP; 6×CA; | ||||
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RB69 DNA polymerase ternary complex with dT/dG at position n-1 of primer/template duplex | monomer | 1×ATP; 7×CA; | ||||
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RB69 DNA Polymerase (L561A/S565G/Y567A) Ternary Complex with dTTP Opposite dT | monomer | 1×TTP; 6×CA; | ||||
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RB69 DNA polymerase ternary complex with dT/dG at position n-4 of primer/template duplex | monomer | 1×ATP; 6×CA; | ||||
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Crystal structure of a replicative DNA polymerase bound to the oxidized guanine lesion guanidinohyd… | monomer | |||||
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RB69 DNA polymerase ternary complex with dG/dT at position n-3 of primer/tempLate duplex | monomer | 1×ATP; 5×CA; | ||||
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RB69 DNA Polymerase (L561A/S565G/Y567A) Ternary Complex with dCTP Opposite Difluorotoluene Nucleosi… | monomer | 1×DCP; 4×CA; | ||||
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RB69 DNA polymerase ternary complex with dcTP/dC | monomer | 1×DCP; 5×CA; | ||||
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High-Resolution Structure of Apo RB69 DNA Polymerase | monomer | 2×K; 1×GMP; | ||||
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RB69 DNA Polymerase (Y567A) ternary complex with dATP Opposite 7,8-dihydro-8-oxoguanine | monomer | 1×DTP; 5×CA; | ||||
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RB69 DNA Polymerase (Y567A) Ternary Complex with dCTP Opposite 2AP (GC rich sequence) | monomer | 1×DCP; 5×CA; | ||||
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RB69 DNA Polymerase Triple Mutant(L561A/S565G/Y567A) Ternary Complex with dUpNpp and a Deoxy-termin… | monomer | 1×DUP; 4×CA; | ||||
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Crystal structure of the beta hairpin loop deletion variant of RB69 gp43 in complex with DNA contai… | monomer | |||||
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DNA Polymerase(L415A/L561A/S565G/Y567A) Ternary Complex with dUpCpp Opposite dA (Ca2+) | monomer | 1×UPC; 4×CA; | ||||
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RB69 DNA Polymerase (S565G/Y567A) Ternary Complex with dTTP Opposite dG | monomer | 1×TTP; 6×CA; | ||||
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Crystal structure of the D714A mutant of RB69 DNA polymerase | monomer | 1×GMP; 3×SO4; 3×CL; | ||||
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Triple Mutant APO structure | monomer | 4×SO4; 1×GMP; | ||||
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Crystal Structure of a replicative DNA polymerase bound to DNA containing Thymine Glycol | monomer | |||||
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Closed binary complex of an RB69 gp43 fingers domain mutant complexed with an acyclic GMP terminate… | monomer | 1×MG; | ||||
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Closed ternary complex of an RB69 gp43 fingers domain mutant complexed with an acyclic GMP terminat… | monomer | 1×PPF; 3×MG; | ||||
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Crystal structure of Enterobacteria phage RB69 gp43 DNA polymerase complexed with tetrahydrofuran c… | monomer | 1×3DR; 1×DOC; 2×CA; | ||||
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CRYSTAL STRUCTURE OF A REPLICATION FORK DNA POLYMERASE EDITING COMPLEX AT 2.7 A RESOLUTION | monomer | 9×CA; 1×GDP; | ||||
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5-hydroxycytosine paired with dAMP in RB69 gp43 | monomer | 1×SO4; | ||||
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Crystal structure of RB69 gp43 in complex with DNA with dATP opposite dTMP | monomer | 1×MG; 1×DTP; | ||||
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Crystal structure of RB69 gp43 in complex with DNA with dAMP opposite an abasic site analog in a 21… | monomer | |||||
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DNA POLYMERASE FROM BACTERIOPHAGE RB69 | monomer | 1×5GP; | ||||
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5-hydroxycytosine paired with dGMP in RB69 gp43 | monomer | 1×SO4; | ||||
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Crystal Structure of a replicative DNA polymerase bound to DNA containing Thymine Glycol | monomer | |||||
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Crystal structure of RB69 gp43 in complex with DNA with 5-NIMP opposite an abasic site analog | monomer | 2×N5P; | ||||
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Crystal structure of RB69 gp43 in complex with DNA with 5-NITP opposite an abasic site analog | monomer | 1×MG; 1×N5P; | ||||
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5-fluorocytosine paired with dAMP in RB69 gp43 | monomer | 1×SO4; | ||||
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Crystal structure of RB69 gp43 with DNA and dATP opposite 8-oxoG | monomer | 1×DTP; 3×MN; 2×SO4; | ||||
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5-fluorocytosine paired with ddGMP in RB69 gp43 | monomer | 1×SO4; | ||||
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DNA POLYMERASE FROM BACTERIOPHAGE RB69 | monomer | 1×GMP; | ||||
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RB69 DNA Polymerase (L561A/S565G/Y567A) Ternary Complex with dGTP Opposite Difluorotoluene Nucleosi… | monomer | 1×DGT; 5×CA; | ||||
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Ternary complex of rb69 mutant L415F with a ribonucleotide at -1 position | monomer | 1×TTP; 3×CA; 4×NA; | ||||
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RB69 DNA Polymerase Ternary Complex with dTTP Opposite 2AP (AT rich sequence) | monomer | 1×TTP; 5×CA; | ||||
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Ternary complex of RB69 mutant L415F with a ribonucleotide at 0 position | monomer | 3×CA; 1×TTP; 4×NA; 1×CL; | ||||
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Ternary complex of RB69 mutant L415F wit DUMPNPP | monomer | 3×CA; 1×DUP; 8×NA; | ||||
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RB69 DNA Polymerase Ternary Complex with dTTP Opposite 2AP (GC rich sequence) | monomer | 1×TTP; 5×CA; | ||||
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Ternary complex of rb69 mutant L415F with ribonucleotide at -3 position | monomer | 1×TTP; 6×CA; 6×NA; | ||||
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RB69 DNA Polymerase Ternary Complex with dATP Opposite dT with 3-Deaza-adenine at the N-3 Position … | monomer | 1×DTP; 7×CA; | ||||
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Ternary complex of RB69 mutant L415F with ribonucleotide at -2 position | monomer | 1×TTP; 8×CA; 2×NA; | ||||
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Ternary complex of the L415F mutant RB69 exo(-)polymerase | monomer | 6×CA; 3×NA; 1×TTP; 3×GOL; | ||||
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Ternary complex of rb69 mutant l415f with ribonucleotides at -1 and -2 position | monomer | 1×TTP; 6×CA; 2×NA; 1×PO4; | ||||
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Crystal structure of RB69 GP43 in complex with DNA containing Thymine Glycol | monomer | |||||
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Crystal structure of RB69 GP43 in complex with DNA containing an abasic site analog | monomer | |||||
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Crystal Structure of a replicative DNA polymerase bound to DNA containing Thymine Glycol | monomer | |||||
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Crystal Structure of a replicative DNA polymerase bound to DNA containing Thymine Glycol | monomer | |||||
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RB69 DNA Polymerase (L561A/S565G/Y567A) Ternary Complex with dGTP Opposite dT | monomer | 1×DGT; 5×CA; | ||||
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RB69 DNA Polymerase L415K Ternary Complex | monomer | 1×TTP; 9×CA; | ||||
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RB69 DNA Polymerase (L561A/S565G/Y567A) Ternary Complex with dCTP Opposite dT | monomer | 1×DCP; 6×CA; | ||||
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RB69 DNA Polymerase (L561A/S565G/Y567A) Ternary Complex with dTTP Opposite Difluorotoluene Nucleosi… | monomer | 1×TTP; 7×CA; | ||||
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RB69 DNA Polymerase L415A Ternary Complex | monomer | 1×TTP; 7×CA; | ||||
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RB69 DNA Polymerase Ternary Complex with dUpCpp Opposite dA | monomer | 1×DUP; 5×CA; | ||||
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RB69 DNA Polymerase Ternary Complex with dTTP Opposite an Abasic Site and ddC/dG as the Penultimate… | monomer | 1×TTP; 4×CA; | ||||
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RB69 DNA polymerase ternary complex with dG/dT at position n-2 of primer/tempLate duplex | monomer | 1×ATP; 5×CA; | ||||
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RB69 DNA Polymerase (L561A/S565G/Y567A) Ternary Complex with dDTP Opposite dT | monomer | 1×DTP; 5×CA; | ||||
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RB69 DNA Polymerase Ternary Complex with dGTP Opposite an Abasic Site and ddC/dG as the Penultimate… | monomer | 1×DGT; 6×CA; | ||||
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RB69 DNA polymerase ternary complex with dG/dT at position n-1 of primer/template duplex | monomer | 1×ATP; 5×CA; | ||||
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RB69 DNA polymerase ternary complex with dGTP/dA | monomer | 1×DGT; 5×CA; | ||||
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RB69 DNA Polymerase Ternary Complex containing dUpNpp | monomer | 1×DUP; 6×CA; | ||||
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RB69 DNA Polymerase (Y567A) Ternary Complex with dATP Opposite 3tCo | monomer | 1×ATP; 4×CA; | ||||
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RB69 DNA polymerase ternary complex with dG/dT at position n-5 of primer/template duplex | monomer | 1×ATP; 5×CA; | ||||
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RB69 DNA polymerase ternary complex with dGTP/dT | monomer | 1×DGT; 5×CA; | ||||
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RB69 DNA polymerase ternary complex with dGTP/dG | monomer | 1×DGT; 5×CA; | ||||
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RB69 DNA Polymerase Ternary Complex with dTTP Opposite an Abasic Site and ddT/dA as the Penultimate… | monomer | 1×TTP; 5×CA; | ||||
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RB69 DNA polymerase ternary complex with dT/dG at position n-2 of primer/template duplex | monomer | 1×ATP; 5×CA; | ||||
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RB69 DNA Polymerase (Y567A) Ternary Complex with dGT Opposite 3tCo | monomer | 1×DGT; 7×CA; | ||||
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RB69 DNA Polymerase Ternary Complex with dCTP Opposite an Abasic Site and ddG/dC as the Penultimate… | monomer | 1×DCP; 5×CA; | ||||
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RB69 DNA Polymerase Ternary Complex with dCTP Opposite an Abasic Site and ddC/dG as the Penultimate… | monomer | 1×DCP; 4×CA; | ||||
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RB69 DNA polymerase ternary complex with dTTP/dT | monomer | 1×TTP; 5×CA; | ||||
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RB69 DNA polymerase ternary complex with dTTP/dG | monomer | 1×TTP; 5×CA; | ||||
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RB69 DNA polymerase ternary complex with dTTP/dC | monomer | 1×TTP; 5×CA; | ||||
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RB69 DNA polymerase ternary complex with dATP/dA | monomer | 1×DTP; 5×CA; | ||||
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RB69 DNA Polymerase Ternary Complex with dDTP Opposite dT with 3-Deaza-adenine at the N-1 Position … | monomer | 1×DTP; 7×CA; | ||||
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RB69 DNA polymerase ternary complex with dCTP/dA | monomer | 1×DCP; 5×CA; | ||||
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RB69 DNA Polymerase L415M Ternary Complex | monomer | 1×ATP; 6×CA; | ||||
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RB69 DNA polymerase ternary complex with dATP/dC | monomer | 1×DTP; 5×CA; | ||||
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RB69 DNA Polymerase Ternary Complex with dATP Opposite an Abasic Site and ddC/dG as the Penultimate… | monomer | 1×DTP; 4×CA; | ||||
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RB69 DNA Polymerase L415G Ternary Complex | monomer | 1×ATP; 6×CA; | ||||
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RB69 DNA polymerase ternary complex with dATP/dT | monomer | 1×DTP; 5×CA; | ||||
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RB69 DNA polymerase ternary complex with dGTP/dC | monomer | 1×DGT; 5×CA; | ||||
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RB69 DNA polymerase ternary complex with dATP/dG | monomer | 1×DTP; 5×CA; | ||||
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RB69 DNA Polymerase(L415A/L561A/S565G/Y567A) Ternary Complex with dUpCpp Opposite dA | monomer | 1×UPC; 5×MG; | ||||
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RB69 DNA Polymerase Ternary Complex with dATP Opposite dT | monomer | 1×DTP; 7×CA; | ||||
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RB69 DNA polymerase ternary complex with dCTP/dT | monomer | 1×DCP; 5×CA; | ||||
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RB69 DNA polymerase ternary complex with dT/dG at position n-5 of primer/template duplex | monomer | 1×ATP; 5×CA; | ||||
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RB69 DNA Polymerase (Y567A) Ternary Complex with dATP Opposite Difluorotoluene Nucleoside | monomer | 1×ATP; 4×CA; | ||||
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RB69 DNA Polymerase Triple Mutant (L561A/S565G/Y567A) Ternary Complex with dUpNpp and a Deoxy-termi… | monomer | 1×DUP; 7×MN; | ||||
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Structure of the replicating complex of a POL Alpha family DNA Polymerase, ternary complex 2 | monomer | 5×CA; 1×CL; 1×TTP; | ||||
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Ternary complex of rb69 mutant L415F with ribonucleotides at 0 and -1 position | monomer | 1×TTP; 4×CA; 6×NA; 1×GOL; | ||||
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Structure of the replicating complex of a POL Alpha family DNA Polymerase, ternary complex 1 | monomer | 4×CA; 1×CL; 1×TTP; | ||||
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Crystal structure of the ternary complex of the D714A mutant of RB69 DNA polymerase | monomer | 2×XG4; 1×CA; 5×SO4; 2×GOL; 1×NA; | ||||
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Structure of the Replicating Complex of a Pol Alpha Family DNA Polymerase | monomer | 4×CA; 1×TTP; | ||||
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RB69 DNA polymerase ternary complex with dTTP/dA | monomer | 1×TTP; 5×CA; | ||||
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RB69 DNA polymerase ternary complex with dCTP/dG | monomer | 1×DCP; 6×CA; | ||||
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RB69 DNA Polymerase (Y567A) Ternary Complex with dTTP Opposite 2AP (GC rich sequence) | monomer | 1×TTP; 5×CA; | ||||
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CRYSTAL STRUCTURE OF ENTEROBACTERIA PHAGE RB69 GP43 DNA POLYMERASE COMPLEXED WITH 8-OXOGUANOSINE CO… | monomer | 1×DCP; 3×CA; | ||||
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RB69 DNA Polymerase (Y567A) Ternary Complex with dCTP Opposite 2AP (AT rich sequence) | monomer | 1×DCP; 5×CA; | ||||
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Crystal structure of the ternary complex of the D714A mutant of RB69 DNA polymerase | monomer | 2×XG4; 1×CA; 1×NA; | ||||
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RB69 DNA Polymerase (Y567A) Ternary Complex with dTTP Opposite 2AP (AT rich sequence) | monomer | 1×TTP; 5×CA; | ||||
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1 SWISS-MODEL model
Template | Oligo-state | QMEANDisCo | Range | Ligands | Trg-Tpl Seq id (%) | |
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3uiq.1.A | monomer | 0.88 | 2×CA; | 100.00 | ||
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