A1AJA5 (RS6_ECOK1) Escherichia coli O1:K1 / APEC

30S ribosomal protein S6 UniProtKBInterProInteractive Modelling

131 aa; Sequence (Fasta) 198 identical sequences

Sequence Features

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 3-91Ribosomal protein S6
IPR000529PF01250

Sequence Alignments

Experimental structures

DescriptionOligo-stateLigandsStructureRange
70S termination complex with RF2 bound to the UGA codon. Rotated ribosome with RF2 bound (Structure… Heteromer
A0A037Y8L6; A0A0E2KXL3; A0A0E2L017; A0A0E2L2J1; B7MAS6; B7MCR3; B7MCS9; B7MGC4; B7MIU7; B7MIX0; B7N179; D7X2Z9; D7XH79; D7Z814; D7Z9F4; D7Z9F6; D7Z9F9; D7Z9G0; D7Z9G3; D7Z9G4; D7Z9G5; D7Z9G6; D7Z9G7; D7Z9G8; D7Z9G9; D7Z9H0; D7Z9H1; D7Z9H2; D7Z9H3; D7Z9H7; D7Z9P0; D7ZAN0; D7ZAN1; D7ZAS2; D7ZEL4; D7ZEN7; D7ZES9; D7ZET0; D7ZGG2; D7ZI15; D7ZI17; D7ZK99; D7ZKU3; H4UQ02; P0A7L8; P0ADY7; P60422; P60438; S0YB49;
6ogg1-101
Assess
70S termination complex with RF2 bound to the UAG codon. Rotated ribosome conformation (Structure V) Heteromer
A0A037Y8L6; A0A0E2KXL3; A0A0E2L017; A0A0E2L2J1; B7MAS6; B7MCR3; B7MCS9; B7MGC4; B7MIU7; B7MIX0; B7N179; D7X2Z9; D7XH79; D7Z814; D7Z9F4; D7Z9F6; D7Z9F9; D7Z9G0; D7Z9G3; D7Z9G4; D7Z9G5; D7Z9G6; D7Z9G7; D7Z9G8; D7Z9G9; D7Z9H0; D7Z9H1; D7Z9H2; D7Z9H3; D7Z9H7; D7Z9P0; D7ZAN0; D7ZAN1; D7ZAS2; D7ZEL4; D7ZEN7; D7ZES9; D7ZET0; D7ZGG2; D7ZI15; D7ZI17; D7ZK99; D7ZKU3; H4UQ02; P0A7L8; P0ADY7; P60422; P60438; S0YB49;
6ogi1-101
Assess
70S termination complex with RF2 bound to the UGA codon. Partially rotated ribosome with RF2 bound … Heteromer
A0A037Y8L6; A0A0E2KXL3; A0A0E2L017; A0A0E2L2J1; B7MAS6; B7MCR3; B7MCS9; B7MGC4; B7MIU7; B7MIX0; B7N179; D7X2Z9; D7XH79; D7Z814; D7Z9F4; D7Z9F6; D7Z9F9; D7Z9G0; D7Z9G3; D7Z9G4; D7Z9G5; D7Z9G6; D7Z9G7; D7Z9G8; D7Z9G9; D7Z9H0; D7Z9H1; D7Z9H2; D7Z9H3; D7Z9H7; D7Z9P0; D7ZAN0; D7ZAN1; D7ZAS2; D7ZEL4; D7ZEN7; D7ZES9; D7ZET0; D7ZGG2; D7ZI15; D7ZI17; D7ZK99; D7ZKU3; H4UQ02; P0A7L8; P0ADY7; P60422; P60438; S0YB49;
6ogf1-101
Assess
30S initiation complex Heteromer
A0A069XYI1; A0A080IK26; A0A090BZT4; A0A1X3KX08; A0A376HTV6; B6I217; B7MIU7; D7X302; D7XN21; D8A1L7; F4SQ43; L3BXG0; L3PZ69; P0A7R9; S1CG62; S1D5F0; T6N332; T9TH92; U9ZNW8; V6FZ95;
6o7k1-100
Assess
Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure III-B) Heteromer
A0A037Y8L6; A0A080IK26; A0A0E2L017; A0A1X3KX08; A0A376HTV6; A0A4Y8DMK0; B7MGC4; B7MIU7; C3TPN2; D6I1Y5; D6I208; D6I3M6; D7X302; D7XH79; D7XKZ6; D7XN21; D7Z9F6; D7Z9G0; D7Z9G3; D7ZEN7; D7ZET0; D7ZI15; D8A1L7; E0J6I2; E2QFJ4; E3PJQ3; E9TH65; E9YV47; F4SQ43; F4TL26; F4TL27; G0F552; I2UH22; I2X0X3; I2X1N4; I2X5R7; I2XAW2; J7RMJ2; L3CCT0; L3NSS9; L3PZ69; P0ADY7; P60422; P60438; S1CG62; S1D5F0; S1ERR4; S1EUW9; T6N332; T9TH92; U9YFU2; V6FZ95;
FME;PHE;GDP;6wd91-100
Assess
Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure III-C) Heteromer
A0A037Y8L6; A0A080IK26; A0A0E2L017; A0A1X3KX08; A0A376HTV6; A0A4Y8DMK0; B7MGC4; B7MIU7; C3TPN2; D6I1Y5; D6I208; D6I3M6; D7X302; D7XH79; D7XKZ6; D7XN21; D7Z9F6; D7Z9G0; D7Z9G3; D7ZEN7; D7ZET0; D7ZI15; D8A1L7; E0J6I2; E2QFJ4; E3PJQ3; E9TH65; E9YV47; F4SQ43; F4TL26; F4TL27; G0F552; I2UH22; I2X0X3; I2X1N4; I2X5R7; I2XAW2; J7RMJ2; L3CCT0; L3NSS9; L3PZ69; P0ADY7; P60422; P60438; S1CG62; S1D5F0; S1ERR4; S1EUW9; T6N332; T9TH92; U9YFU2; V6FZ95;
FME;PHE;GDP;6wda1-100
Assess
Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure II-A) Heteromer
A0A037Y8L6; A0A073FNB4; A0A080IK26; A0A0E2L017; A0A1X3KX08; A0A376HTV6; A0A4Y8DMK0; A0A5B7PA13; B7MGC4; B7MIU7; C3TPN2; D6I1Y5; D6I208; D7X302; D7XH79; D7XKZ6; D7XN21; D7Z9F6; D7Z9G0; D7Z9G3; D7ZEN7; D7ZET0; D7ZI15; D8A1L7; E0J6I2; E2QFJ4; E3PJQ3; E9TH65; F4SQ43; F4TL26; F4TL27; G0F552; I2UH22; I2X0X3; I2X1N4; I2X5R7; I2XAW2; J7RMJ2; L3CCT0; L3NSS9; L3PZ69; P0ADY7; P60422; P60438; S1CG62; S1D5F0; S1ERR4; S1EUW9; T6N332; T9TH92; U9YFU2; V6FZ95;
FME;PHE;GTP;6wd21-100
Assess
Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure I-A) Heteromer
A0A037Y8L6; A0A069XRX8; A0A073FNB4; A0A080IK26; A0A0E2L017; A0A1X3KX08; A0A1X3LC97; A0A222QU44; A0A376HTV6; A0A4P8C2I6; A0A4Y8DMK0; A0A5B7PA13; B7MGC4; B7MIU7; C3TPN2; D6I208; D7X302; D7XH79; D7XKZ6; D7XN21; D7Z9F6; D7Z9G0; D7Z9G3; D7ZEN7; D7ZET0; D7ZI15; D8A1L7; E3PJQ3; E9TH65; F4SQ43; F4TL26; F4TL27; G0F552; I2UH22; I2X0X3; I2X1N4; J7RMJ2; L3CCT0; L3NSS9; L3PZ69; P0ADY7; P60422; P60438; S1CG62; S1D5F0; S1ERR4; S1EUW9; T6N332; T9TH92; U9YFU2; V6FZ95;
FME;6wd01-100
Assess
Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure II-C1) Heteromer
A0A037Y8L6; A0A069XRX8; A0A073FNB4; A0A080IK26; A0A0E2L017; A0A0H3GYM7; A0A1X3KX08; A0A1X3LC97; A0A222QU44; A0A376HTV6; A0A4P8C2I6; A0A4Y8DMK0; A0A5B7PA13; B7MGC4; B7MIU7; C3TPN2; D6I208; D7X302; D7XH79; D7XKZ6; D7XN21; D7Z9F6; D7Z9G0; D7Z9G3; D7ZEN7; D7ZET0; D7ZI15; D8A1L7; E2QFJ4; E3PJQ3; F4SQ43; F4TL26; F4TL27; G0F552; I2UH22; I2X0X3; I2X1N4; J7RMJ2; L3CCT0; L3NSS9; L3PZ69; P0ADY7; P60422; P60438; S1CG62; S1D5F0; S1ERR4; S1EUW9; T6N332; T9TH92; U9YFU2; V6FZ95;
FME;PHE;GDP;6wd51-100
Assess
Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure III-A) Heteromer
A0A037Y8L6; A0A080IK26; A0A0E2L017; A0A1X3K2N0; A0A1X3KX08; A0A376HTV6; A0A4P8C2I6; A0A4Y8DMK0; B7L4K1; B7MGC4; B7MIU7; C3TPN2; D6IFL9; D7X302; D7XH79; D7XN21; D7Z9F6; D7Z9G0; D7Z9G3; D7ZEN7; D7ZET0; D7ZI15; D8A1L7; E0J6I2; E1IKL4; E2QFJ4; E3PJQ3; E9TH65; F4SQ43; H4JDL7; H4KMR7; I2UH22; I2X1W0; I2X5R7; I2X5X6; I2X6E7; L3NSS9; L3P526; L3PZ69; P0ADY7; P60422; P60438; S1CG62; S1D5F0; S1EUW9; T6L9R3; T6N332; T9TH92; U9ZRE0; U9ZRE5; V0AIT6; V6FZ95;
FME;PHE;GTP;6wd81-100
Assess
Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure II-B1) Heteromer
A0A037Y8L6; A0A069XRX8; A0A073FNB4; A0A080IK26; A0A0E2L017; A0A1X3KX08; A0A1X3LC97; A0A222QU44; A0A376HTV6; A0A4P8C2I6; A0A4Y8DMK0; A0A5B7PA13; B7MGC4; B7MIU7; C3TPN2; D6I208; D7X302; D7XH79; D7XKZ6; D7XN21; D7Z9F6; D7Z9G0; D7Z9G3; D7ZEN7; D7ZET0; D7ZI15; D8A1L7; E2QFJ4; E3PJQ3; E9TH65; F4SQ43; F4TL26; F4TL27; G0F552; I2UH22; I2X0X3; I2X1N4; J7RMJ2; L3CCT0; L3NSS9; L3PZ69; P0ADY7; P60422; P60438; S1CG62; S1D5F0; S1ERR4; S1EUW9; T6N332; T9TH92; U9YFU2; V6FZ95;
FME;PHE;GDP;6wd31-100
Assess
Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure I-B) Heteromer
A0A037Y8L6; A0A080IK26; A0A0E2L017; A0A1X3KX08; A0A376HTV6; A0A4Y8DMK0; B7MGC4; B7MIU7; C3TPN2; D7X302; D7XH79; D7XN21; D7Z9F6; D7Z9G0; D7Z9G3; D7ZEN7; D7ZET0; D7ZI15; D8A1L7; F4SQ43; L3PZ69; P0ADY7; P60422; P60438; S1CG62; S1D5F0; T6N332; T9TH92; V6FZ95;
6wd11-100
Assess
Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure II-B2) Heteromer
A0A037Y8L6; A0A069XRX8; A0A073FNB4; A0A080IK26; A0A0E2L017; A0A1X3KX08; A0A1X3LC97; A0A222QU44; A0A376HTV6; A0A4P8C2I6; A0A4Y8DMK0; A0A5B7PA13; B7MGC4; B7MIU7; C3TPN2; D6I208; D7X302; D7XH79; D7XKZ6; D7XN21; D7Z9F6; D7Z9G0; D7Z9G3; D7ZEN7; D7ZET0; D7ZI15; D8A1L7; E2QFJ4; E3PJQ3; E9TH65; F4SQ43; F4TL26; F4TL27; G0F552; I2UH22; I2X0X3; I2X1N4; J7RMJ2; L3CCT0; L3NSS9; L3PZ69; P0ADY7; P60422; P60438; S1CG62; S1D5F0; S1ERR4; S1EUW9; T6N332; T9TH92; U9YFU2; V6FZ95;
FME;PHE;GDP;6wd41-100
Assess
Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure II-D) Heteromer
A0A037Y8L6; A0A080IK26; A0A0E2L017; A0A1X3KX08; A0A376HTV6; A0A4Y8DMK0; B7MGC4; B7MIU7; C3TPN2; D6I1Y5; D6I208; D6I3M6; D7X302; D7XH79; D7XKZ6; D7XN21; D7Z9F6; D7Z9G0; D7Z9G3; D7ZEN7; D7ZET0; D7ZI15; D8A1L7; E0J6I2; E2QFJ4; E3PJQ3; E9TH65; E9YV47; F4SQ43; F4TL26; F4TL27; G0F552; I2UH22; I2X0X3; I2X1N4; I2X5R7; I2XAW2; J7RMJ2; L3CCT0; L3NSS9; L3PZ69; P0ADY7; P60422; P60438; S1CG62; S1D5F0; S1ERR4; S1EUW9; T6N332; T9TH92; U9YFU2; V6FZ95;
FME;6wd71-100
Assess

Homology models

Oligo-stateQMEANTemplateRangeSeq id (%)Ligands
monomer -0.13 5me0.1.F1-106
100.00
Assess