L3NUH9 (L3NUH9_ECOLX) Escherichia coli KTE66

DNA-directed RNA polymerase subunit omega UniProtKBInterProInteractive Modelling

91 aa; Sequence (Fasta) 516 identical sequences

Sequence Features

 10-59RNA polymerase, subunit omega/K/RPB6
IPR006110PF01192

Sequence Alignments

Experimental structures

DescriptionOligo-stateLigandsStructureRangeDownloadAssess
'X-ray crystal structure of the Escherichia coli RNA polymerase in complex with Benzoxazinorifamy... Heteromer
P0A7Z4; P0A8V2; P0A8T7; P00579;
MG;ZN;1RM;4kn72-91
X-ray crystal structure of the Escherichia coli RNA polymerase in complex with Rifampin Heteromer
P0A7Z4; P0A8V2; P0A8T7; P00579;
ZN;RFP;MG;4kmu2-91
'X-ray crystal structure of Escherichia coli sigma70 holoenzyme in complex with Guanosine tetraph... Heteromer
P0A7Z4; P0A8V2; P0A8T7; P00579;
G4P;ZN;4jk12-91
'X-ray crystal structure of the Escherichia coli RNA polymerase in complex with Benzoxazinorifamy... Heteromer
P0A7Z4; P0A8V2; P0A8T7; P00579;
ZN;1RL;MG;4kn42-91
'X-ray crystal structure of Escherichia coli sigma70 holoenzyme in complex with guanosine pentaph... Heteromer
P0A7Z4; P0A8V2; P0A8T7; P00579;
ZN;0O2;4jk22-91
E. coli Transcription Initiation Complex - 16-bp spacer and 5-nt RNA Heteromer
P0A7Z4; P0A8V2; P0A8T7; P00579;
ZN;MG;4ylp2-91
E. coli Transcription Initiation Complex - 17-bp spacer and 4-nt RNA Heteromer
A7ZSI4; A7ZUK1; A7ZUK2; P00579;
ZN;MG;4yln2-91
E. coli Transcription Initiation Complex - 16-bp spacer and 4-nt RNA Heteromer
A7ZSI4; A7ZUK1; P0A8T7; P00579;
MG;ZN;4ylo2-91
RNA polymerase model placed by Molecular replacement into X-ray diffraction map of DNA-bound RNA ... Heteromer
P0A7Z4; P0A8V2; P0A8T7;
5ezk2-91
'CryoEM structure of E.coli RNA polymerase paused elongation complex without RNA hairpin bound to... Heteromer
P0A7Z4; P0A8V2; P0A8T7;
MG;ZN;6flp2-91
Structure of THE RNA POLYMERASE LAMBDA-BASED ANTITERMINATION COMPLEX Heteromer
P0AFF8; P0A782; P0A7R7; P0AFG1; P03045; P0A7Z6; P0A8V4; P0A8T8;
MG;ZN;6gov2-91
'Three-dimensional EM structure of an intact activator-dependent transcription initiation complex' Heteromer
P0A7Z4; P0A8V2; P0A8T7; P00579; P0ACJ8;
CMP;3iyd2-91
CryoEM structure of E.coli RNA polymerase paused elongation complex bound to NusA Heteromer
P0A7Z4; P0A8V2; P0A8T7; P0AFF6;
MG;ZN;6flq2-91
Escherichia coli RNA polymerase mutant - RpoB D516V Heteromer
P0A7Z4; P0A8V2; P0A8T7; P00579;
MG;ZN;5uag2-90
Escherichia coli RNA polymerase in complex with squaramide compound 8. Heteromer
A7ZSI4; A7ZUK1; A7ZUK2; P00579;
4C6;MG;ZN;4yfk2-90
Escherichia coli RNA polymerase RpoB H526Y mutant Heteromer
P0A7Z4; P0A8V2; P0A8T7; P00579;
MG;ZN;5uaq2-90
X-ray crystal structure of Escherichia coli RNA polymerase (RpoB-H526Y) and ppApp complex Heteromer
P0A7Z4; P0A8V2; P0A8T7; P00579;
ZN;MG;ECJ;6byu2-90
Crystal structure of CBR 9393 bound to Escherichia coli RNA polymerase holoenzyme Heteromer
A7ZSI4; A7ZUK1; A7ZUK2; P00579;
MG;42U;ZN;4xsz2-90
X-ray crystal structur of Escherichia coli RNA polymerase sigma70 holoenzyme Heteromer
P0A7Z6; P0A8V4; P0A8T8; P00579;
MG;ZN;4yg22-90
Crystal structure of CBR 703 bound to Escherichia coli RNA polymerase holoenzyme Heteromer
A7ZSI4; A7ZUK1; A7ZUK2; P00579;
ZN;42S;MG;4xsx2-90
Escherichia coli RNA polymerase and Rifampin complex, wild-type Heteromer
P0A7Z4; P0A8V2; P0A8T7; P00579;
MG;RFP;ZN;5uac2-90
X-ray crystal structure of Escherichia coli RNA polymerase and TraR complex Heteromer
P0A7Z4; P0A8V2; P0A8T7; P00579; P41065;
MG;ZN;5w1s2-90
Escherichia coli RNA polymerase in complex with squaramide compound 14 (N-[3,4-dioxo-2-(4-{[4-(tr... Heteromer
A7ZSI4; A7ZUK1; A7ZUK2; P00579;
MG;4C2;ZN;4yfn2-90
Escherichia coli RNA polymerase in complex with Myxopyronin B Heteromer
A7ZSI4; A7ZUK1; A7ZUK2; P00579;
MG;ZN;4C4;4yfx2-90
Escherichia coli RNA polymerase and Rifampin complex, RpoB S531L mutant Heteromer
P0A7Z4; P0A8V2; P0A8T7; P00579;
MG;RFP;ZN;5ual2-90
Crystal structure of Escherichia coli RNA polymerase in complex with salinamide A Heteromer
P0A7Z4; P0A8V2; P0A8T7; P00579;
MG;ZN;4mex3-91
Escherichia coli RNA polymerase RpoB S531L mutant Heteromer
P0A7Z4; P0A8V2; P0A8T7; P00579;
MG;ZN;5uaj2-90
Crystal structure of Escherichia coli RNA polymerase holoenzyme Heteromer
P0A7Z4; P0A8V2; P0A8T7; P00579;
MG;ZN;4mey3-91
Crystal structure of Escherichia coli RNA polymerase in complex with CBRP18 Heteromer
P0A7Z4; P0A8V2; P0A8T7; P00579;
MG;ZN;4OE;4zh42-90
Crystal structure of CBR 9379 bound to Escherichia coli RNA polymerase holoenzyme Heteromer
A7ZSI4; A7ZUK1; A7ZUK2; P00579;
ZN;MG;42T;4xsy2-90
Crystal structure of Escherichia coli RNA polymerase in complex with CBRH16-Br Heteromer
P0A7Z4; P0A8V2; P0A8T7; P00579;
MG;ZN;4OD;4zh32-90
Escherichia coli RNA polymerase and Rifampin complex, RpoB D516V mutant Heteromer
P0A7Z4; P0A8V2; P0A8T7; P00579;
MG;RFP;ZN;5uah2-90
Escherichia coli RpoB S531L mutant RNA polymerase holoenzyme in complex with Kanglemycin A Heteromer
P0A7Z4; P0A8V2; P0A8T7; P00579;
KNG;MG;ZN;6cux2-90
Crystal structure of Escherichia coli RNA polymerase in complex with CBR703 Heteromer
P0A7Z4; P0A8V2; P0A8T7; P00579;
4OB;MG;ZN;4zh22-90
X-ray crystal structure of Escherichia coli RNA polymerase and DksA/ppGpp complex Heteromer
P0A7Z4; P0A8V2; P0A8T7; P00579; P0ABS1;
G4P;MG;ZN;5vsw2-90
X-ray crystal structure of Escherichia coli RNA polymerase and DksA complex Heteromer
P0A7Z4; P0A8V2; P0A8T7; P00579; P0ABS1;
MG;ZN;5w1t2-90
'pseudo-atomic model of the RNA polymerase lambda-based antitermination complex solved by cryo-EM' Heteromer
P03045; P0A7Z4; P0A8V2; P0A8T7; P0A7R5; P0AFG0; P0A780; P0AFF6;
MG;ZN;5ms02-90
Molecular model of Escherichia coli core RNA polymerase Heteromer
P0A7Z4; P0A8V2; P0A8T7;
MG;ZN;3lu02-90
CryoEM structure of E.coli RNA polymerase elongation complex bound with RfaH Heteromer
P0A7Z4; P0A8V2; P0A8T7; P0AFW0;
MG;ZN;6c6s2-84
CryoEM structure of E.coli RNA polymerase elongation complex bound with RfaH Heteromer
P0A7Z4; P0A8V2; P0A8T7; P0AFW0;
MG;ZN;6c6t2-84
CryoEM structure of E.coli his pause elongation complex Heteromer
P0A7Z4; P0A8V2; P0A8T7;
MG;ZN;6asx2-84
CryoEM structure of E.coli RNA polymerase elongation complex bound with NusG Heteromer
P0A7Z4; P0A8V2; P0A8T7; P0AFG0;
MG;ZN;6c6u3-84
'Escherichia coli RNA polymerase sigma70-holoenzyme bound to upstream fork promoter DNA and Capis... Heteromer
P0A7Z4; P0A8V2; P0A8T7; Q0P6L9;
ZN;MG;EPE;EDO;6n612-80
SigmaS-transcription initiation complex with 4-nt nascent RNA Heteromer
P0A7Z4; P0A8V2; P0A8T7; P13445;
DPO;ZN;MG;5ipl2-80
'Escherichia coli RNA polymerase sigma70-holoenzyme bound to upstream fork promoter DNA and Micro... Heteromer
P0A7Z4; P0A8V2; P0A8T7; Q0P6L9; Q9X2V7;
MG;ZN;6n602-80
structure of sigmaN-holoenzyme Heteromer
P0A7Z6; B7MIX3; P0A8T8; A0A0J4U551;
MG;ZN;5ui82-80
Crystal Structure of Escherichia coli RNA polymerase - Sigma54 Holoenzyme complex Heteromer
P0A7Z4; P0A8V2; P0A8T7; R4YEY9;
ZN;5byh5-83
Escherichia coli RNA polymerase sigma70-holoenzyme bound to upstream fork promoter DNA Heteromer
P0A7Z6; P0A8V4; P0A8T8; Q0P6L9;
MG;ZN;6n622-80
SigmaS-transcription initiation complex with 4-nt nascent RNA Heteromer
P0A7Z4; P0A8V2; P0A8T7; P13445;
ZN;MG;5ipm2-80
SigmaS-transcription initiation complex with 4-nt nascent RNA Heteromer
P0A7Z4; P0A8V2; P0A8T7; P13445;
ZN;MG;5ipn2-80
'CryoEM structure of Escherichia coli sigmaE transcription initiation complex containing 5nt of RNA' Heteromer
P0A7Z4; P0A8V2; P0A8T7; P0AGB6;
MG;ZN;6jbq2-80
CryoEM structure of E.coli his pause elongation complex without pause hairpin Heteromer
P0A7Z4; P0A8V2; P0A8T7;
MG;ZN;6bjs2-80
Cryo-EM structure of a Q-engaged arrested complex Heteromer
P0A7Z4; P0A8V2; P0A8T7; P00579; M1FPN0;
MG;ZN;6jnx2-80
CryoEM structure of sigma appropriation complex Heteromer
P0A7Z4; P0A8V2; P0A8T7; P00579; P32267; P22915;
MG;ZN;6k4y2-80
CryoEM structure of crosslinked E.coli RNA polymerase elongation complex Heteromer
P0A7Z4; P0A8V2; P0A8T7;
MG;ZN;6alf2-80
The cryo-EM structure of a bacterial class I transcription activation complex Heteromer
P0A7Z6; B7MIX3; P0A8T8; P00579; P0ACK0; P0A7Z6;
ZN;MG;CMP;6b6h2-80
E. coli expressome Heteromer
P0A7V3; P0A7V8; P0A7W1; P02358; P02359; P0A7W7; P0A7X3; P0A7R5; P0A7R9; P0A7S3; P0A7S9; P0AG59; P0ADZ4; P0A7T3; P0AG63; P0A7T7; P0A7U3; P0A7U7; P0A7V0; P68679; P0A7Z4; P0A8V2; P0A8T7;
ZN;5my15-83
CryoEM structure of SigmaS-transcription initiation complex with activator Crl Heteromer
P0A7Z6; P0A8V4; P0A8T7; S5ZIY8; A0A0F7J6B7;
MG;ZN;6omf2-80
'Escherichia coli 6S RNA derivative in complex with Escherichia coli RNA polymerase sigma70-holoe... Heteromer
P0A7Z4; P0A8V2; P0A8T7; P00579;
MG;ZN;5vt02-80
Crystal Structure of Escherichia coli RNA polymerase - Sigma54 Holoenzyme complex Heteromer
P0A7Z4; P0A8V2; P0A8T7; R4YEY9;
ZN;MG;5nwt4-81
Cryo-EM structure of E. coli RNAP sigma70 open complex Heteromer
P0A7Z4; P0A8V2; P0A8T7; P00579;
MG;ZN;6ca02-77
Cryo-EM structure of E. coli RNAP sigma70 holoenzyme Heteromer
P0A7Z4; P0A8V2; P0A8T7; P00579;
MG;ZN;6c9y2-77
Structure of 30S ribosomal subunit and RNA polymerase complex in non-rotated state Heteromer
P0A7Z6; B7MIX3; P0A8T8; B7MBF0; B7MCS9; B7MCR2; P0A7W3; B7NGD4; B7MCV6; B7MCS1; B7MBZ1; B7MCT6; B7MCR3; B7MCV7; P0A7T1; B7MCS2; B7MB86; B7MIU7; B7MCS6; B7MLK7; B7MCT1; B7MAE3; A8A4M2;
6awb2-77
'Cryo-EM structure of bacterial RNA polymerase-sigma54 holoenzyme intermediate partially loaded c... Heteromer
P0A7Z4; P0A8V2; P0A8T7; P06223;
6gh61-75
Q21 transcription antitermination complex: loading complex Heteromer
P0A7Z4; P0A8V2; P0A8T7; P00579; Q9XJQ6;
ZN;MG;6p182-76
Q21 transcription antitermination complex: loaded complex Heteromer
P0A7Z4; P0A8V2; P0A8T7; Q9XJQ6;
ZN;MG;6p192-76
Cryo-EM structure of bacterial RNA polymerase-sigma54 holoenzyme transcription open complex Heteromer
P0A7Z4; P0A8V2; P0A8T7; P06223;
6gh51-75
Cryo-EM structure of RNA polymerase-sigma54 holo enzyme with promoter DNA closed complex Heteromer
P0A7Z4; P0A8V2; P0A8T7; P06223;
5nsr2-75
'Cryo-EM structure of RNA polymerase-sigma54 holoenzyme with promoter DNA and transcription activ... Heteromer
P0A7Z4; P0A8V2; P0A8T7; P37344; P06223;
5nss2-75
'Cryo-EM structure of bacterial RNA polymerase-sigma54 holoenzyme initial transcribing complex' Heteromer
P0A7Z4; P0A8V2; P0A8T7; P06223;
6gfw2-75
Cryo-EM structure of E. coli RNA polymerase backtracked elongation complex in swiveled state Heteromer
P0A7Z4; P0A8V2; P0A8T7;
ZN;MG;6rip2-74
Cryo-EM structure of E. coli RNA polymerase elongation complex bound to CTP substrate Heteromer
P0A7Z4; P0A8V2; P0A8T7;
ZN;CTP;MG;6rh32-74
'Cryo-EM structure of E. coli RNA polymerase elongation complex bound to GreB transcription factor' Heteromer
C3SQ22; P0A7Z4; P0A8V2; P0A8T7; C3SQ22;
ZN;MG;6ri72-74
'Cryo-EM structure of E. coli RNA polymerase backtracked elongation complex in non-swiveled state' Heteromer
P0A7Z4; P0A8V2; P0A8T7;
ZN;MG;6ri92-74
CryoEM structure of HK022 Nun - E.coli RNA polymerase elongation complex Heteromer
P0A7Z4; P0A8V2; P0A8T7; P18683;
MG;ZN;6alg2-74
CryoEM structure of E.coli RNA polymerase elongation complex Heteromer
P0A7Z4; P0A8V2; P0A8T7;
MG;ZN;6alh2-74
'Cryo-EM structure of E. coli RNA polymerase backtracked elongation complex bound to GreB transcr... Heteromer
C3SQ22; P0A7Z4; P0A8V2; P0A8T7;
ZN;MG;6rin2-74
Structure of 30S ribosomal subunit and RNA polymerase complex in rotated state Heteromer
P0A7Z6; B7MIX3; P0A8T8; B7MBF0; B7MCS9; B7MCR2; P0A7W3; B7NGD4; B7MCV6; B7MCS1; B7MBZ1; B7MCT6; B7MCR3; B7MCV7; P0A7T1; B7MCS2; B7MB86; B7MIU7; B7MCS6; B7MLK7; B7MCT1; B7MAE3; A8A4M2;
6awc2-60
Structure of 30S (S1 depleted) ribosomal subunit and RNA polymerase complex Heteromer
P0A7Z6; B7MIX3; P0A8T8; B7MBF0; B7MCS9; B7MCR2; P0A7W3; B7NGD4; B7MCV6; B7MCS1; B7MBZ1; B7MCT6; B7MCR3; B7MCV7; P0A7T1; B7MCS2; B7MB86; B7MIU7; B7MCS6; B7MLK7; B7MCT1; B7MAE3; A8A4M2;
6awd2-60