O00267 (SPT5H_HUMAN) Homo sapiens (Human)

Transcription elongation factor SPT5 UniProtKBInterproStringInteractive Modelling

1087 aa; Sequence (Fasta) ; (Isoform 2; )

Sequence Features

 75-172Spt5 transcription elongation factor, N- terminal
IPR022581PF11942
 178-264NGN domain
IPR005100PF03439
 475-501KOW
IPR005824PF00467

Sequence Alignments

Experimental structures

DescriptionOligo-stateLigandsStructureRangeDownload
Structure of activated transcription complex Pol II-DSIF-PAF-SPT6 Heteromer
I3LJR4; I3LGP4; I3LCH3; A0A287ADR4; I3LSI7; F1SKN8; I3LJZ9; I3LCB2; P60899; A0A287B432; F1RKE4; I3LN51; Q7KZ85; Q6PD62; Q9GZS3; P63272;
ZN;MG;6gmh176-1087
Structure of an RNA polymerase II-DSIF transcription elongation complex Heteromer
G3MZY8; A5PJW8; Q3T0Q3; Q1JQ91; Q2T9T3; Q32PE0; Q5E9B8; F2Z4H3; Q32P73; Q32P78; Q32P79; Q3ZBC0; P63272;
ZN;MG;5oik176-1087
Structure of paused transcription complex Pol II-DSIF-NELF Heteromer
I3LJR4; I3LGP4; I3LCH3; I3LSI7; F1SKN8; I3LCB2; P60899; A0A287B432; F1RKE4; I3LN51; Q9H3P2; Q8WX92; Q8IXH7; P63272; A0A287ADR4; I3LJZ9;
MG;ZN;6gml176-1087
Crystal structure of the human transcription elongation factor DSIF, hSpt4/hSpt5 (176-273) Heteromer
P63272;
ZN;BME;3h7h176-273
Crystal Structure of Human Rtf1 Plus3 Domain in Complex with Spt5 CTR Phosphopeptide Heteromer
Q92541;
SO4;4l1u781-790
The crystal structure of a self-peptide complexed to Abacavir and HLA-B*57:01 Heteromer
P18465; P61769;
1KX;5u98980-988
4th KOW domain of human hSpt5monomer 6eqy533-647
6th KOW domain of human hSpt5monomer 6er0974-1087
Crystal structure of the KOWx-KOW4 domain of human DSIFmonomer GOL;5oho536-646
Crystal structure of the KOW6-KOW7 domain of human DSIFmonomer NA;CL;5ohq979-1087
Solution structure of the fifth KOW motif of human transcription elongation factor SPT5monomer 2e70694-757
Solution structure of the third KOW motif of transcription elongation factor SPT5monomer 2do3462-523
Solution structure of the second KOW motif of human transcription elongation factor SPT5monomer 2e6z420-471

Homology models built on isoform sequence

Isoform #Oligo-stateLigandsQMEANTemplateRangeSeq id (%)ReportDownload
2monomer-1.525oik.1.Q172-750
99.72