O43426 (SYNJ1_HUMAN) Homo sapiens (Human)

Synaptojanin-1 UniProtKBInterProSTRINGInteractive Modelling

1573 aa; Sequence (Fasta) ; (Isoform 2; Isoform 4; Isoform 5; )

Sequence Features

 219R -> Q (in PARK20; impairs the phosphatase activity of the enzyme toward phosphatidylinositol-3-phosphate and phosphatidylinositol-4-phosphate). VAR_070905
 295K -> R (in dbSNP:rs2254562). VAR_047308 dbSNP
 420R -> P (in PARK20). VAR_078803
 849Y -> C (in EIEE53; decreased inositol phosphate phosphatase activity). VAR_078804
 981M -> I (polymorphism; no effect on inositol phosphate phosphatase activity). VAR_078805
 1018Y -> S (polymorphism; no effect on inositol phosphate phosphatase activity). VAR_078806
 1366V -> A (in dbSNP:rs9980589). VAR_047309 dbSNP
 1383S -> R (in PARK20; unknown pathological significance; the patient also carries a heterozygous PINK1 truncating mutation). VAR_070906
 1547P -> L (in dbSNP:rs2230767). VAR_049603 dbSNP
 60-340SAC domain
IPR002013PF02383
 538-859Endonuclease/exonuclease/phosphatase
IPR005135PF03372
 867-1006Domain of unknown function DUF1866
IPR015047PF08952

Sequence Alignments

Experimental structures

DescriptionOligo-stateLigandsStructureRangeDownloadAssess
'Crystal structure of the alpha-adaptin appendage domain, from the AP2 adaptor complex, bound to ... Heteromer
P17427;
CO3;BEN;SO4;DTD;1w801459-1485
Crystal structure of the alpha-adaptin appendage domain, from the AP2 adaptor complex, in complex... Heteromer
O08838; P17427;
CL;BEN;SO4;DTD;2vj01478-1485
Solution structure of RNA binding domain in Synaptojanin 1monomer 2dnr894-971

Homology models

Oligo-stateLigandsQMEANTemplateRangeSeq id (%)ReportDownloadAssess
monomer -4.154cmn.1.A515-894
36.25
monomer -3.833lwt.1.A15-444
28.38

Homology models built on isoform sequence

Isoform #Oligo-stateLigandsQMEANTemplateRangeSeq id (%)ReportDownloadAssess
5monomer-3.463lwt.1.A14-444
28.35
2monomer-4.734cmn.1.A526-888
38.54
4monomer-4.724cmn.1.A526-888
38.54
2monomer-3.623lwt.1.A15-444
28.38
4monomer-3.813lwt.1.A15-444
28.38