O95243 (MBD4_HUMAN) Homo sapiens (Human)

Methyl-CpG-binding domain protein 4 UniProtKBInterproStringInteractive Modelling

580 aa; Sequence (Fasta) ; (Isoform 2; Isoform 3; Isoform 5; Isoform 6; )

Sequence Features

 560
 61C -> R (in dbSNP:rs2307296). VAR_029306 dbSNP
 273A -> S (in dbSNP:rs10342). VAR_019357 dbSNP
 273A -> T (in dbSNP:rs10342). VAR_019514 dbSNP
 342S -> P (in dbSNP:rs2307289). VAR_019358 dbSNP
 346E -> K (in dbSNP:rs140693). VAR_019359 dbSNP
 358I -> T (in dbSNP:rs2307298). VAR_019515 dbSNP
 568D -> H (in dbSNP:rs2307293). VAR_019360 dbSNP
 79-149Methyl-CpG DNA binding
IPR001739PF01429

Sequence Alignments

Experimental structures

DescriptionOligo-stateLigandsStructureRangeDownload
Structure of the glycosylase domain of MBD4 bound to AP site containing DNAmonomer EDO;4e9f437-580
Structure of the glycosylase domain of MBD4monomer 4e9e437-580
Structural basis for thymine glycosylase activity on T:O6-methylG mismatch by methyl-CpG binding ...monomer MG;4ofa438-580
Structure of wild-type human MBD4 bound to a G:T mismatchmonomer MG;5chz438-580
Structural basis for thymine glycosylase activity on T:O6-methylG mismatch by methyl-CpG binding ...monomer MG;4ofe438-580
Structural basis for thymine glycosylase activity on T:O6-methylG mismatch by methyl-CpG binding ...monomer MG;4ofh438-580
structure of the glycosylase domain of MBD4 bound to thymine containing DNAmonomer 4e9g438-580
Crystal Structure of MBD4 Catalytic Domain Bound to Abasic DNAmonomer K;4dk9438-580
structure of glycosylase domain of MBD4 bound to 5hmU containing DNAmonomer 4e9h438-580
Structure of the glycoslyase domain of MBD4 bound to a 5hmU containing DNAmonomer 4ea5439-580
The C-terminal glycosylase domain of human MBD4monomer 3iho437-574
Structure of the glycosylase domain of MBD4 bound to 5hmU-containing DNAmonomer 4ea4438-574
Solution structure of MBD4 methyl-cytosine binding domain bound to methylated DNAmonomer 2moe80-148
Crystal structure MBD4 MBD domain in complex with methylated CpG DNAmonomer 11×UNX;4lg783-149

Homology models built on isoform sequence

Isoform #Oligo-stateLigandsQMEANTemplateRangeSeq id (%)ReportDownload
2monomer0.953vxv.1.A84-148
87.69
3monomer0.953vxv.1.A84-148
86.36
5monomer0.933vxv.1.A84-148
87.69
3monomerMG;-0.335chz.1.A438-538
100.00
5monomerMG;-0.825chz.1.A438-571
94.33
5monomer-1.072moe.1.A80-147
100.00
2monomer-1.072moe.1.A80-147
100.00
3monomer-1.072moe.1.A80-147
100.00
6monomer-1.254dk9.1.C120-259
100.00
2monomer-1.274dk9.1.C432-571
100.00