O95243 (MBD4_HUMAN) Homo sapiens (Human)

Methyl-CpG-binding domain protein 4 UniProtKBInterProSTRINGInteractive Modelling

580 aa; Sequence (Fasta) ; (Isoform 2; Isoform 3; Isoform 5; Isoform 6)

Available Structures

18 Experimental Structures

DescriptionPDB IDOligo-stateRangeLigands
Human MBD4 glycosylase domain bound to DNA containing substrate analog 2'-deoxy-pseudouridine
7kz0
monomer437-580
3×GOL; 1×K;
Assess
Human MBD4 glycosylase domain bound to DNA containing oxacarbenium-ion analog 1-aza-2'-deoxyribose
7kzg
monomer437-580
4×GOL; 1×PEG; 1×EDO; 1×NA; 1×CL;
Assess
Human MBD4 glycosylase domain bound to DNA containing an abasic site
7kz1
monomer436-578
1×GOL; 1×EDO; 1×NA;
Assess
Structural basis for thymine glycosylase activity on T:O6-methylG mismatch by methyl-CpG binding do…
4ofa
monomer438-579
1×MG;
Assess
Structural basis for thymine glycosylase activity on T:O6-methylG mismatch by methyl-CpG binding do…
4ofe
monomer438-579
1×MG;
Assess
Structural basis for thymine glycosylase activity on T:O6-methylG mismatch by methyl-CpG binding do…
4ofh
monomer438-578
1×MG;
Assess
Structure of wild-type human MBD4 bound to a G:T mismatch
5chz
monomer438-577
1×MG;
Assess
Structure of the glycosylase domain of MBD4
4e9e
monomer437-576
Assess
Crystal Structure of MBD4 Catalytic Domain Bound to Abasic DNA
4dk9
monomer438-577
1×K;
Assess
Structure of the glycosylase domain of MBD4 bound to AP site containing DNA
4e9f
monomer437-574
1×EDO;
Assess
Crystal structure of WT hMBD4 complexed with T:G mismatch DNA
6vjw
monomer438-575
Assess
structure of the glycosylase domain of MBD4 bound to thymine containing DNA
4e9g
monomer438-575
Assess
The C-terminal glycosylase domain of human MBD4
3iho
monomer437-574
Assess
Structure of the glycosylase domain of MBD4 bound to 5hmU-containing DNA
4ea4
monomer438-574
Assess
structure of glycosylase domain of MBD4 bound to 5hmU containing DNA
4e9h
monomer438-574
Assess
Structure of the glycoslyase domain of MBD4 bound to a 5hmU containing DNA
4ea5
monomer439-574
Assess
Solution structure of MBD4 methyl-cytosine binding domain bound to methylated DNA
2moe
monomer80-148
Assess
Crystal structure MBD4 MBD domain in complex with methylated CpG DNA
4lg7
monomer83-145
11×UNX;
Assess

3 SWISS-MODEL models

TemplateOligo-stateQMEANDisCoRangeLigandsTrg-Tpl Seq id (%)
7kz0.1.Amonomer0.85437-580
100.00
Assess
3vxv.1.Amonomer0.6184-148
83.82
Assess
1ub1.1.Amonomer0.5285-154
56.52
Assess

10 SWISS-MODEL models built on isoform sequence

TemplateIsoformOligo-stateQMEANDisCoRangeLigandsTrg-Tpl Seq id (%)
Isoform 27kz0.1.Amonomer0.84431-574
100.00
Assess
Isoform 23vxv.1.Amonomer0.5884-148
83.82
Assess
Isoform 21ub1.1.Amonomer0.5285-154
56.52
Assess
Isoform 37kz1.1.Amonomer0.79436-540
98.25
Assess
Isoform 33vxv.1.Amonomer0.6184-148
83.82
Assess
Isoform 31ub1.1.Amonomer0.5285-154
56.52
Assess
Isoform 57kz1.1.Amonomer0.78436-562
95.59
Assess
Isoform 53vxv.1.Amonomer0.6384-148
83.82
Assess
Isoform 51ub1.1.Amonomer0.5285-154
56.52
Assess
Isoform 67kz0.1.Amonomer0.87119-262
100.00
Assess