P01127 (PDGFB_HUMAN) Homo sapiens (Human)
Platelet-derived growth factor subunit B UniProtKBInterproStringInteractive Modelling
241 aa; Sequence (Fasta) ; (Isoform 2; ) Identical sequences: Homo sapiens: A0A384NYY3
Sequence Features
| 108 | Involved in receptor binding. | ||
| 111 | Involved in receptor binding. | ||
| 124 | Interchain. | ||
| 133 | Interchain. | ||
| 9 | L -> R (in IBGC5; loss of protein expression). VAR_070870 | ||
| 88 | I -> V (in dbSNP:rs17565). VAR_014578 dbSNP | ||
| 119 | L -> P (in IBGC5; loss of protein expression; dbSNP:rs397515632). VAR_070871 dbSNP | ||
| 97-141 | |||
| 130-178 | |||
| 134-180 | |||
| 21-92 | Platelet-derived growth factor, N-termin al IPR006782PF04692 | ||
| 97-180 | PDGF/VEGF domain IPR000072PF00341 |
Sequence Alignments
Experimental structures
| Description | Oligo-state | Ligands | Structure | Range | Download |
|---|---|---|---|---|---|
| The structure of a platelet derived growth factor receptor complex |
Heteromer P01127; P09619; | 13×NAG; 1×NDG; | 3mjg | ||
| PDGF-B blocking antibody bound to PDGF-BB |
Heteromer | 4qci | |||
| Crystal structure of human PDGF-BB in complex with a modified nucleotide aptamer (SOMAmer SL5) | homo-2-mer | 2×NA; 2×MG; | 4hqu | ||
| CRYSTAL STRUCTURE OF HUMAN PLATELET-DERIVED GROWTH FACTOR BB | homo-2-mer | 1pdg | |||
| CRYSTAL STRUCTURE OF HUMAN PDGF-BB IN COMPLEX WITH A Modified nucleotide aptamer (SOMAmer SL4) | homo-2-mer | 2×NA; 2×MG; | 4hqx |
Homology models
| Oligo-state | Ligands | QMEAN | Template | Range | Seq id (%) | Report | Download |
|---|---|---|---|---|---|---|---|
| monomer | 1.06 | 1v15.2.A | 31.25 |
Homology models built on isoform sequence
| Isoform # | Oligo-state | Ligands | QMEAN | Template | Range | Seq id (%) | Report | Download |
|---|---|---|---|---|---|---|---|---|
| 2 | monomer | 0.85 | 3gkl.1.A | 32.26 | ||||
| 2 | homo-2-mer | -0.67 | 4hqu.1.A | 100.00 | ||||
| 2 | monomer | -0.79 | 3mjg.1.B | 100.00 |