P01127 (PDGFB_HUMAN) Homo sapiens (Human)
Platelet-derived growth factor subunit B UniProtKBInterProSTRINGInteractive Modelling
241 aa; Sequence (Fasta) ; (Isoform 2; ) Identical sequences: Homo sapiens: A0A384NYY3
Molecule Processing
| Platelet-derived growth factor subunit B |
It is possible new templates exist for this target since these models were created.
Sequence Features
| 108 | Involved in receptor binding | ||
| 111 | Involved in receptor binding | ||
| 124 | Interchain | ||
| 133 | Interchain | ||
| 9 | L -> R (in IBGC5; loss of protein expression) VAR_070870 | ||
| 88 | I -> V (in dbSNP:rs17565) VAR_014578 dbSNP | ||
| 119 | L -> P (in IBGC5; loss of protein expression; dbSNP:rs397515632) VAR_070871 dbSNP | ||
| 97-141 | |||
| 130-178 | |||
| 134-180 | |||
| 21-93 | Platelet-derived growth factor, N-terminal IPR006782PF04692 | ||
| 97-180 | PDGF/VEGF domain IPR000072PF00341 |
Sequence Alignments
Experimental structures
| Description | Oligo-state | Ligands | Structure | Range | Download | Assess |
|---|---|---|---|---|---|---|
| The structure of a platelet derived growth factor receptor complex |
Heteromer P09619; | 1×NDG; 13×NAG; | 3mjg | |||
| PDGF-B blocking antibody bound to PDGF-BB |
Heteromer | 4qci | ||||
| CRYSTAL STRUCTURE OF HUMAN PLATELET-DERIVED GROWTH FACTOR BB | homo-2-mer | 1pdg | ||||
| Crystal structure of human PDGF-BB in complex with a modified nucleotide aptamer (SOMAmer SL5) | homo-2-mer | 2×NA; 2×MG; | 4hqu | |||
| CRYSTAL STRUCTURE OF HUMAN PDGF-BB IN COMPLEX WITH A Modified nucleotide aptamer (SOMAmer SL4) | homo-2-mer | 2×NA; 2×MG; | 4hqx |
Homology models
| Oligo-state | Ligands | QMEAN | Template | Range | Seq id (%) | Download | Assess |
|---|---|---|---|---|---|---|---|
| monomer | 0.52 | 1v15.2.A | 31.25 |
Homology models built on isoform sequence
| Isoform # | Oligo-state | Ligands | QMEAN | Template | Range | Seq id (%) | Report | Download | Assess |
|---|---|---|---|---|---|---|---|---|---|
| 2 | homo-2-mer | -0.58 | 4hqu.1.C | 100.00 | |||||
| 2 | monomer | -0.97 | 3mjg.1.B | 100.00 | |||||
| 2 | monomer | 0.60 | 3gkl.1.A | 32.26 |