P03088 (VP1_POVBK) BK polyomavirus (BKPyV) (Human polyomavirus 1)

Major capsid protein VP1 UniProtKBInterProInteractive Modelling

362 aa; Sequence (Fasta) ; 1 identical sequence: BK polyomavirus: I3QHU1

Available Structures

14 Experimental Structures

DescriptionPDB IDOligo-stateRangeLigands
Cryo-EM of BK polyomavirus
5fua
 Heteromer
14-362
Assess
Cryo-EM structure of BK polyomavirus like particle in complex with single chain antibody ScFv41F17
6gg0
 Heteromer
15-361
Assess
BK polyomavirus + 20 mM GT1b oligosaccharide
6esb
 Heteromer
P03094; 		15-361
6×SIA; 6×CA;
Assess
BK polyomavirus VP1 in complex with scFv 29B1
7pa7
 Heteromer
33-300
Assess
unliganded BK Polyomavirus VP1 pentamer
4mj1
 Heteromer
33-298
5×GOL; 5×CL;
Assess
BK Polyomavirus VP1 pentamer fusion with long C-terminal extended arm
7b6c
homo-5-mer25-335
1×DMS; 1×CA;
Assess
BK Polyomavirus VP1 pentamer core(residues 26-299) mutant C104S
7b69
homo-5-mer27-298
13×DMS;
Assess
BK Polyomavirus VP1 pentamer core (residues 30-299)
7b6a
homo-5-mer31-300
13×CA; 12×DMS; 16×IOD; 2×NA;
Assess
BK Polyomavirus VP1 pentamer in complex with GD3 oligosaccharide
4mj0
homo-5-mer33-299
1×BGC; 2×SIA; 1×GAL; 7×GOL; 5×CL;
Assess
JC Polyomavirus VP1 in complex with 3'-Sialyllactose glycomacromolecules (aliphatic linker)
7zip
homo-5-mer33-299
1×BGC;
Assess
BK Polyomavirus VP1 mutant VQQ
8ah0
homo-5-mer33-298
8×GOL; 5×CL;
Assess
BK Polyomavirus VP1 mutant E73Q
8ago
homo-5-mer33-298
3×GOL; 5×CL;
Assess
BK Polyomavirus VP1 mutant E73A
8agh
homo-5-mer33-298
5×GOL; 5×CL;
Assess
BK Polyomavirus VP1 mutant N-Q
8ah1
homo-5-mer33-298
5×CL; 3×GOL;
Assess

1 SWISS-MODEL model

TemplateOligo-stateQMEANDisCoRangeLigandsTrg-Tpl Seq id (%)
1sva.1.Ahomo-6-mer0.7714-362
81.44
Assess