P03407 (NEF_HV1A2) Human immunodeficiency virus type 1 group M subtype B (isolateARV2/SF2) (HIV-1)

Protein Nef UniProtKBInterProInteractive Modelling

210 aa; Sequence (Fasta)

Sequence Features

 20Might play a role in AP-1 recruitment to the Nef-MHC-I complex.
 61-62Cleavage; by viral protease.
 2-209HIV negative factor Nef
IPR001558PF00469

Sequence Alignments

Experimental structures

DescriptionOligo-stateLigandsStructureRangeDownloadAssess
HIV-1 Nef protein in complex with engineered Hck-SH3 domain Heteromer
P08631;
3rea56-205
'Crystal Structure of HIV-1 Nef-SF2 Core Domain in Complex with the Src Family Kinase Hck SH3-SH2... Heteromer
P03407; P08631;
MPD;IOD;4u5w71-208
'HIV-1 Nef protein in complex with single domain antibody sdAb19 and an engineered Hck SH3 domain' Heteromer
P08631;
4orz71-208
HIV-1 NEF protein in complex with engineered HCK SH3 domain Heteromer
P08631;
EDO;3rbb72-208
HIV-1 Nef protein in complex with engineered Hck-SH3 domain Heteromer
P08631;
3reb74-207
Crystal structure of peptide-HLA-A24 bound to S19-2 V-delta/V-beta TCR Heteromer
P05534; P61769;
5xov138-147
'HLA class I micropolymorphisms determine peptide-HLA landscape and dictate differential HIV-1 es... Heteromer
P30480; P61769;
GOL; 26×EDO;4u1m75-83
'HLA class I micropolymorphisms determine peptide-HLA landscape and dictate differential HIV-1 es... Heteromer
P30480; P61769;
GOL; 12×EDO;4u1n75-83
'HLA class I micropolymorphisms determine peptide-HLA landscape and dictate differential HIV-1 es... Heteromer
Q31610; P61769;
GOL;EDO;SO4;4u1l75-83
'HLA class I micropolymorphisms determine peptide-HLA landscape and dictate differential HIV-1 es... Heteromer
P01889; P61769;
GOL;EDO;SO4;4u1k75-83
A novel HIV-1 Nef dimer interface induced by a single octyl-glucoside moleculehomo-2-mer BOG;6b7257-207

Homology models

Oligo-stateLigandsQMEANTemplateRangeSeq id (%)ReportDownloadAssess
monomer -2.754en2.2.A6-208
87.38
monomer -5.141qa5.1.A2-61
82.76
monomer -6.541qa4.1.A2-61
84.21