P04608 | SWISS-MODEL Repository

P04608 (TAT_HV1H2) Human immunodeficiency virus type 1 group M subtype B (isolate HXB2)(HIV-1)

Protein Tat UniProtKB InterPro Interactive Modelling

86 aa; Sequence (Fasta) ; (Isoform 2); 1 identical sequence: Simian-Human immunodeficiency virus: Q5XLM7

It is possible new templates exist for this target since these models were created.

However, an attempt to improve models for this target was made on 2024-04-10. The outcome - only low quality models could be built.

Available Structures

6 Experimental Structures

Description	PDB ID	Oligo-state	Range	Ligands
Crystal structure of HIV-1 Tat complexed with human P-TEFb	3mi9 SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer O60563; P50750;	1-49	2×ZN;
Assess
Crystal structure of HIV-1 Tat complexed with human P-TEFb and AFF4	4or5 SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer O60563; P50750; Q9UHB7;	1-48	8×YT3; 2×SO4; 2×ZN;
Assess
Crystal structure of HIV-1 Tat complexed with ATP-bound human P-TEFb	3mia SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer O60563; P50750;	1-48	1×ANP; 1×MG; 2×ZN;
Assess
HIV-1 TAR loop in complex with Tat:AFF4:P-TEFb	6cyt SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer O60563; P50750; Q9UHB7;	1-48	2×ZN;
Assess
Solution structure of HIV-1 TAR with Tat RNA Binding Domain	6mce SMTL PDBe PDBe-KB PDBj PDBsum RCSB	monomer	44-60
Assess
Solution structure of 7SK stem-loop 1 with HIV-1 Tat RNA Binding Domain	6mcf SMTL PDBe PDBe-KB PDBj PDBsum RCSB	monomer	44-60
Assess

1 SWISS-MODEL model

Template	Oligo-state	QMEANDisCo	Range	Ligands	Trg-Tpl Seq id (%)
4ogr.1.D	monomer	0.54	1-49	1×ZN;	100.00
Assess

Model ID	Oligo-state	Avg pLDDT	Range	Trg-Mdl Seq Id (%)

Model ID	Oligo-state	Avg Confidence	Range	Trg-Mdl Seq id (%)

1 SWISS-MODEL model built on isoform sequence

Template	Isoform	Oligo-state	QMEANDisCo	Range	Ligands	Trg-Tpl Seq id (%)
Isoform 2	4ogr.1.D	monomer	0.54	1-49	1×ZN;	100.00
Assess

Alignments