P0A988 (DPO3B_ECOLI) Escherichia coli (strain K12)

Beta sliding clamp UniProtKBInterProSTRINGInteractive Modelling

366 aa; Sequence (Fasta) ; (Isoform 2); 71 identical sequences

Available Structures

73 Experimental Structures

DescriptionPDB IDOligo-stateRangeLigands
A Conserved protein binding-site on Bacterial Sliding Clamps
1ok7
 Heteromer
Q47155; 		1-366
Assess
Complex of beta-clamp processivity factor and little finger domain of PolIV
1unn
 Heteromer
Q47155; 		1-366
2×SO4;
Assess
Mechanism of Processivity Clamp Opening by the Delta Subunit Wrench of the Clamp Loader Complex of …
1jql
 Heteromer
P28630; 		1-366
Assess
Mechanism of Processivity Clamp Opening by the Delta Subunit Wrench of the Clamp Loader Complex of …
1jqj
 Heteromer
P28630; 		1-366
Assess
Cryo-EM structure of the E. coli replicative DNA polymerase-clamp-exonuclase-theta complex bound to…
5m1s
 Heteromer
P03007; P0ABS8; P10443; 		1-366
Assess
Structure of the E. coli clamp loader bound to the beta clamp in an Altered-Collar conformation
8vas
 Heteromer
P06710; P28630; P28631; 		1-366
4×ZN; 3×ADP; 3×BEF; 3×MG;
Assess
Structure of the E. coli clamp loader bound to the beta clamp in a Open-RNAp/t conformation
8vat
 Heteromer
P06710; P28630; P28631; 		1-366
4×ZN; 3×ADP; 3×BEF; 3×MG;
Assess
E. coli clamp loader with open clamp on primed template DNA (form 1)
8gj0
 Heteromer
P06710; P28630; P28631; P28632; 		1-366
3×ADP; 3×MG; 3×ALF; 4×ZN;
Assess
Structure of the E. coli clamp loader bound to the beta clamp in a Closed-DNA2 conformation
8var
 Heteromer
P06710; P28630; P28631; 		1-366
4×ZN; 3×ADP; 3×BEF; 3×MG;
Assess
E. coli clamp loader with open clamp
8giz
 Heteromer
P06710; P28630; P28631; P28632; 		1-366
3×AGS; 3×MG; 4×ZN;
Assess
Structure of the E. coli clamp loader bound to the beta clamp in an Initial-Binding conformation
8van
 Heteromer
C3SLM2; P06710; P28630; P28631; 		1-366
Assess
Structure of the E. coli clamp loader bound to the beta clamp in a Fully-Open conformation
8vap
 Heteromer
P06710; P28630; P28631; 		1-366
3×ADP; 3×BEF; 3×MG; 4×ZN;
Assess
Structure of the E. coli clamp loader bound to the beta clamp in a Closed-DNA1 conformation
8vaq
 Heteromer
P06710; P28630; P28631; 		1-366
4×ZN; 3×ADP; 3×MG; 3×BEF;
Assess
E. coli clamp loader with closed clamp
8giy
 Heteromer
P06710; P28630; P28631; P28632; 		1-366
3×AGS; 3×MG; 4×ZN;
Assess
Structure of the E. coli clamp loader bound to the beta clamp in a Open-DNAp/t conformation
8val
 Heteromer
P06710; P28630; P28631; 		1-366
4×ZN; 3×ADP; 3×BEF; 3×MG;
Assess
Structure of the E. coli clamp loader bound to the beta clamp in a Semi-Open conformation
8vam
 Heteromer
P06710; P28630; P28631; 		1-366
4×ZN; 3×ADP; 3×BEF; 3×MG;
Assess
E. coli clamp loader with closed clamp on primed template DNA
8gj2
 Heteromer
P06710; P28630; P28631; P28632; 		1-366
3×ADP; 3×MG; 3×ALF; 4×ZN;
Assess
E. coli clamp loader with open clamp on primed template DNA (form 2)
8gj1
 Heteromer
P06710; P28630; P28631; P28632; 		1-366
3×ADP; 3×MG; 3×ALF; 4×ZN;
Assess
cryo-EM structure of the E. coli replicative DNA polymerase complex bound to DNA (DNA polymerase II…
5fkw
 Heteromer
P03007; P10443; 		1-366
Assess
cryo-EM structure of the E. coli replicative DNA polymerase complex bound to DNA (DNA polymerase II…
5fkv
 Heteromer
P03007; P06710; P10443; 		1-366
Assess
cryo-EM structure of the E. coli replicative DNA polymerase complex in DNA free state (DNA polymera…
5fku
 Heteromer
P03007; P06710; P10443; 		1-366
Assess
DNA replication regulation protein
5x06
 Heteromer
P69931; 		1-365
4×GOL; 4×ADP; 4×MG;
Assess
The UmuC subunit of the E. coli DNA polymerase V shows a unique interaction with the beta-clamp pro…
4k74
 Heteromer
A0A0H2V735; Q1R4N6; 		1-364
Assess
Structure of the E.coli DNA polymerase sliding clamp with a covalently bound peptide 2.
8pay
homo-2-mer1-366
8×GOL; 6×1PE;
Assess
E. coli sliding clamp in complex with AcLF dipeptide
4k3l
homo-2-mer1-366
2×LEU; 2×PHE; 12×CA; 5×PEG; 2×ACE; 1×PGE; 1×EDO; 1×CL;
Assess
DNA-polymerase sliding clamp (DnaN) from Escherichia coli in complex with Cyclohexyl-Griselimycin.
8ciy
homo-2-mer1-366
12×CA; 10×MG; 2×NA; 4×GOL; 2×ACT;
Assess
DNA polymerase sliding clamp from Escherichia coli with peptide 43 bound
7az8
homo-2-mer1-366
6×PEG; 2×1PE; 5×GOL;
Assess
E. coli sliding clamp in complex with (S)-Carprofen
4mjr
homo-2-mer1-366
2×PGE; 4×PEG; 3×CL; 1×0LA; 1×CA;
Assess
Mutant DNA polymerase sliding clamp from Escherichia coli with bound P7 peptide
6fvm
homo-2-mer1-366
1×CA; 9×1PE; 1×GOL;
Assess
Structure of a small molecule inhibitor bound to a DNA sliding clamp
3d1g
homo-2-mer1-366
2×322;
Assess
DNA polymerase sliding clamp from Escherichia coli with peptide 37 bound
7az7
homo-2-mer1-366
2×FMT; 2×1PE;
Assess
E. coli sliding clamp in complex with 4'-fluorobiphenyl-4-carboxylic acid
4n98
homo-2-mer1-366
1×4FC; 9×CA; 2×PEG; 1×CL;
Assess
E. coli sliding clamp in complex with 6-nitroindazole
4n96
homo-2-mer1-366
1×6NI; 3×CA; 4×CL; 2×PEG;
Assess
E. coli sliding clamp in complex with 3,4-difluorobenzamide
4n94
homo-2-mer1-366
1×2HO; 1×CL; 2×PG4; 2×CA; 1×PEG; 1×EDO;
Assess
E. coli sliding clamp in complex with Bromfenac
4mjq
homo-2-mer1-366
1×27R; 2×PGE; 3×CA; 2×CL; 1×EDO; 1×PG4;
Assess
E. coli sliding clamp in P1 crystal space group
4k3s
homo-2-mer1-366
1×CA; 1×PG4; 1×P4C;
Assess
DNA-polymerase sliding clamp (DnaN) from Escherichia coli in complex with Griselimycin.
8cix
homo-2-mer1-366
2×GOL; 14×CA; 6×ACT; 8×MG; 10×NA;
Assess
DNA polymerase sliding clamp from Escherichia coli with peptide 22 bound
7azc
homo-2-mer1-366
1×GOL;
Assess
E. coli Beta Sliding Clamp, 148-153 Ala Mutant
3f1v
homo-2-mer1-366
2×CA; 1×CL;
Assess
DNA polymerase sliding clamp from Escherichia coli with peptide 18 bound
7aze
homo-2-mer1-366
1×MLI; 2×GOL; 3×1PE;
Assess
E. COLI DNA POLYMERASE BETA SUBUNIT
1mmi
homo-2-mer1-366
Assess
E. coli sliding clamp in complex with AcQLDAF
4k3q
homo-2-mer1-366
6×PEG; 7×CA; 3×PGE; 1×PG4;
Assess
E. Coli sliding clamp in complex with (S)-2-(4-methylpentanamido)-3-phenylpropanoic acid
4k3k
homo-2-mer1-366
4×CA; 4×PG4; 1×PEG; 1×SFK; 1×CL;
Assess
E.coli sliding clamp in complex with AcALDLF peptide
4k3m
homo-2-mer1-366
3×PEG; 7×CA; 2×PGE; 1×PG4;
Assess
E. coli sliding clamp in complex with (R)-Vedaprofen
4mjp
homo-2-mer1-366
2×PEG; 2×PGE; 1×CA; 3×CL; 1×27O;
Assess
E. coli sliding clamp in complex with AcQLDLA
4k3r
homo-2-mer1-366
3×PEG; 2×CA; 1×PGE; 1×CL; 1×PG4;
Assess
DNA polymerase sliding clamp from Escherichia coli with peptide 47 bound
7az5
homo-2-mer1-366
2×PG4; 2×PEG;
Assess
The G157C mutation in the Escherichia coli sliding clamp specifically affects initiation of replica…
2xur
homo-2-mer1-366
Assess
Structure of E. coli polIIIbeta with (Z)-5-(1-((4'-Fluorobiphenyl-4-yl)methoxyimino)butyl)-2,2-dime…
3qsb
homo-2-mer1-366
2×743;
Assess
E. coli sliding clamp in complex with (R)-6-chloro-2,3,4,9-tetrahydro-1H-carbazole-1-carboxylic acid
4n9a
homo-2-mer1-366
5×CA; 1×PG4; 1×2J2; 2×PEG; 2×CL;
Assess
Crystal structure of E. coli sliding clamp (beta) bound to a polymerase II peptide
3d1e
homo-2-mer1-366
Assess
Structure of a sliding clamp on DNA
3bep
homo-2-mer1-366
1×5CY;
Assess
DNA polymerase sliding clamp from Escherichia coli with peptide 36 bound
7az6
homo-2-mer1-366
4×PEG; 2×GOL; 2×ACT; 2×CL;
Assess
DNA polymerase sliding clamp from Escherichia coli with peptide 8 bound
7azf
homo-2-mer1-366
1×GOL; 1×PEG;
Assess
Structure of a small peptide ligand bound to E.coli DNA sliding clamp
3q4l
homo-2-mer1-366
1×NA;
Assess
E. coli sliding clamp in complex with 5-nitroindole
4n97
homo-2-mer1-366
1×2HU; 4×PEG; 1×CA;
Assess
DNA polymerase sliding clamp from Escherichia coli with bound P7 peptide
6fvl
homo-2-mer1-366
11×1PE; 6×GOL;
Assess
E. coli sliding clamp in complex with AcQADLF
4k3o
homo-2-mer1-366
4×PEG; 8×CA; 3×PGE; 2×EDO; 1×PG4;
Assess
Crystal structure of E. coli sliding clamp (beta) bound to a polymerase III peptide
3d1f
homo-2-mer1-366
2×PEG; 2×323;
Assess
DNA polymerase sliding clamp from Escherichia coli with peptide 35 bound
7azk
homo-2-mer1-366
2×GOL; 1×K; 5×1PE; 2×CL;
Assess
E. coli sliding clamp in complex with AcQLALF
4k3p
homo-2-mer1-366
5×CA; 1×EDO; 1×PG4; 2×PEG; 1×PGE; 1×CL;
Assess
DNA polymerase sliding clamp from Escherichia coli with peptide 20 bound
7azd
homo-2-mer1-366
1×1PE; 1×PEG;
Assess
Crystal structure of the E. coli beta clamp mutant R103C, I305C, C260S, C333S at 2.2A resolution
3pwe
homo-2-mer1-366
Assess
Crystal structure of the Escherichia coli sliding clamp-MutL complex.
6e8e
homo-2-mer1-366
6×GOL; 5×SO4;
Assess
DNA-polymerase sliding clamp (DnaN) from Escherichia coli in complex with Mycoplanecin A.
8ciz
homo-2-mer1-366
Assess
E. coli sliding clamp in complex with 6-chloro-2,3,4,9-tetrahydro-1H-carbazole-7-carboxylic acid
4n99
homo-2-mer1-366
1×2J1; 19×PEG; 10×PG4; 5×CA;
Assess
DNA polymerase sliding clamp from Escherichia coli with peptide 38 bound
7azl
homo-2-mer1-366
1×GOL; 1×PEG;
Assess
THREE-DIMENSIONAL STRUCTURE OF THE BETA SUBUNIT OF ESCHERICHIA COLI DNA POLYMERASE III HOLOENZYME: …
2pol
homo-2-mer1-366
Assess
Structure of a small peptide ligand bound to E.coli DNA sliding clamp
3q4k
homo-2-mer1-366
Assess
DNA polymerase sliding clamp from Escherichia coli with peptide 4 bound
7azg
homo-2-mer1-366
Assess
E. coli sliding clamp in complex with 5-chloroindoline-2,3-dione
4n95
homo-2-mer1-365
2×PG4; 5×PEG; 1×2HQ; 1×CL; 1×PGE; 4×CA;
Assess
Structure of a small peptide ligand bound to E.coli DNA sliding clamp
3q4j
homo-2-mer1-365
Assess
Structure of the E.coli DNA polymerase sliding clamp with a covalently bound peptide 3.
8pat
monomer1-366
Assess

1 SWISS-MODEL model

TemplateOligo-stateQMEANDisCoRangeLigandsTrg-Tpl Seq id (%)
8pay.1.Bhomo-2-mer0.881-366
100.00
Assess

2 SWISS-MODEL models built on isoform sequence

TemplateIsoformOligo-stateQMEANDisCoRangeLigandsTrg-Tpl Seq id (%)
Isoform 28pay.1.Amonomer0.881-232
100.00
Assess
Isoform 26fcm.1.Amonomer0.5257-217
14.00
Assess