P0AES6 (GYRB_ECOLI) Escherichia coli (strain K12)
DNA gyrase subunit B UniProtKBInterProSTRINGInteractive Modelling
804 aa; Sequence (Fasta) ;
43 identical sequences
It is possible new templates exist for this target since these models were created.
Available Structures
68 Experimental Structures
Description | PDB ID | Oligo-state | Range | Ligands | ||
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E. coli DNA gyrase bound to a DNA crossover |
Heteromer P0AES4; | |||||
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E. coli DNA gyrase bound to a linear part of a DNA minicircle |
Heteromer P0AES4; | |||||
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Asymetric subunit of E. coli DNA gyrase bound to a linear part of a DNA minicircle |
Heteromer P0AES4; | |||||
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CryoEM structure of the complete E. coli DNA Gyrase complex bound to a 130 bp DNA duplex |
Heteromer P0AES4; | 2×ANP; 1×JHN; | ||||
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E.coli gyrase holocomplex with 217 bp DNA and Albi-2 |
Heteromer P0AES4; | 2×MG; 1×IM0; | ||||
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E.coli gyrase holocomplex with 217 bp DNA and Albi-1 (site TG) |
Heteromer P0AES4; | 1×IL1; 2×MG; | ||||
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E.coli gyrase holocomplex with 217 bp DNA and Albi-1 (site AA) |
Heteromer P0AES4; | 1×IL1; 2×MG; | ||||
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E.coli gyrase holocomplex with 217 bp DNA and albicidin |
Heteromer P0AES4; | 2×MG; 1×BWH; | ||||
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E. coli DNA Gyrase - DNA binding and cleavage domain in State 2 |
Heteromer P0AES4; | |||||
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E. coli DNA Gyrase - DNA binding and cleavage domain in State 1 |
Heteromer P0AES4; | 1×JHN; | ||||
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E. coli DNA Gyrase - DNA binding and cleavage domain in State 1 without TOPRIM insertion |
Heteromer P0AES4; | 1×JHN; | ||||
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A domain insertion in E. coli GyrB adopts a novel fold that plays a critical role in gyrase function |
Heteromer P0AES4; | 4×MG; | ||||
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DIMERIZATION OF E. COLI DNA GYRASE B PROVIDES A STRUCTURAL MECHANISM FOR ACTIVATING THE ATPASE CATA… | homo-2-mer | 3×SO4; 2×ANP; 2×GOL; | ||||
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N-terminal 43 kDa fragment of the E. coli DNA gyrase B subunit grown from 100 mM KCl condition | homo-2-mer | 2×ANP; 2×MG; 2×K; 2×NA; 2×CL; | ||||
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N-terminal 43 kDa fragment of the E. coli DNA gyrase B subunit grown from 100 mM NaCl condition | homo-2-mer | 2×ANP; 2×MG; 4×NA; 2×CL; | ||||
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N-terminal 43 kDa fragment of the E. coli DNA gyrase B subunit grown from 100 mM KCl plus 100 mM Na… | homo-2-mer | 2×ANP; 2×MG; 2×K; 2×NA; 2×CL; | ||||
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N-terminal 43 kDa fragment of the E. coli DNA gyrase B subunit grown from no salt condition | homo-2-mer | 2×ANP; 2×MG; 2×NA; 2×CL; | ||||
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E. coli GyrB 43-kDa N-terminal fragment in complex with ADP-BeF3 | homo-2-mer | 2×ADP; 2×BEF; 2×MG; | ||||
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E. coli GyrB 43-kDa N-terminal fragment in complex with ADP | homo-2-mer | 2×ADP; 2×MG; | ||||
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Crystal structure of the 43K ATPase domain of Escherichia coli gyrase B in complex with an aminocou… | homo-2-mer | 5×PO4; 1×PG4; 2×CL; 1×NA; 3×K; 1×BHW; | ||||
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E. coli GyrB 43-kDa N-terminal fragment in complex with ADP+Pi | homo-2-mer | 2×ADP; 2×PO4; 2×MG; 2×GOL; | ||||
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E. coli GyrB ATPase domain in complex with methyl 3,4-dihydroxybenzoate | homo-2-mer | 2×HE9; 1×AX7; 5×PO4; | ||||
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E. coli GyrB ATPase domain in complex with Naringenin | homo-2-mer | 1×AX7; 3×PO4; 1×CWE; | ||||
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E. coli GyrB ATPase domain in complex with methyl 2,4-dihydroxybenzoate | homo-2-mer | 1×AX7; 2×HF9; 2×PO4; | ||||
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E. coli GyrB ATPase domain in complex with 2-chlorophenol | homo-2-mer | 1×AX7; 2×2CH; 3×PO4; | ||||
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E. coli GyrB ATPase domain in complex with methyl 4-hydroxybenzoate | homo-2-mer | 1×AX7; 2×MPB; 3×PO4; | ||||
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E. coli GyrB ATPase domain in complex with 4-chlorophenol | homo-2-mer | 1×AX7; 2×4CH; 3×PO4; | ||||
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E. coli GyrB ATPase domain in complex with 4-nitropheno | homo-2-mer | 1×AX7; 2×NPO; 2×PO4; | ||||
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E. coli GyrB ATPase domain in complex with Esculetin | homo-2-mer | 1×AX7; 2×HFC; 2×PO4; | ||||
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E. coli GyrB ATPase domain in complex with 3,4-Dihydroxyacetophenone | homo-2-mer | 1×AX7; 2×HFO; 3×PO4; | ||||
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E. coli GyrB ATPase domain in complex with 4-chlorobenzene-1,2-diol | homo-2-mer | 1×AX7; 2×4CL; 4×PO4; | ||||
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E. coli GyrB ATPase domain in complex with Methyl 4-hydroxycinnamate | homo-2-mer | 1×AX7; 2×HF6; 2×PO4; | ||||
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The DNA Gyrase B ATP binding domain of Escherichia coli in complex with a small molecule inhibitor. | homo-2-mer | 3×SO4; 2×DOO; | ||||
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E. coli GyrB ATPase domain in complex with 2-hydroxybenzamide | homo-2-mer | 1×AX7; 2×OHB; 3×PO4; | ||||
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Crystal structure of E. coli Gyrase B co-complexed with PROP-2-YN-1-YL {[5-(4-PIPERIDIN-1-YL-2-PYRI… | homo-2-mer | 2×B46; | ||||
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ESCHERICHIA COLI DNA GYRASE B IN COMPLEX WITH BENZOTHIAZOLE-BASED INHIBITOR | monomer | 1×6G9; 1×IOD; | ||||
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GYRASE B IN COMPLEX WITH 4,5-DIBROMOPYRROLAMIDE-BASED INHIBITOR | monomer | 1×4S4; 2×IOD; | ||||
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Ecoli GyrB24 with inhibitor 16a | monomer | 1×ON2; 2×EDO; | ||||
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Crystal structure of E.coli DNA gyrase B in complex with 2-oxo-1,2-dihydroquinoline derivative | monomer | 1×E0F; | ||||
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Crystal structure of E.coli DNA gyrase B in complex with 2-oxo-1,2-dihydroquinoline derivative | monomer | 1×E0R; | ||||
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E. coli DNA Gyrase B 24 kDa ATPase domain in complex with [3-(3-ethyl-ureido)-5-(pyridin-4-yl)-isoq… | monomer | 1×9JG; 1×PO4; | ||||
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E. coli DNA Gyrase B 24 kDa ATPase domain in complex with 1-ethyl-3-[8-methyl-5-(2-methyl-pyridin-4… | monomer | 1×O54; | ||||
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Crystal structure of E.coli DNA gyrase B in complex with 2-oxo-1,2-dihydroquinoline derivative | monomer | 1×E0L; | ||||
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Crystal structure of E.coli DNA gyrase B in complex with 2-oxo-1,2-dihydroquinoline derivative | monomer | 1×E0U; | ||||
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Crystal structure of E.coli DNA gyrase B in complex with 6-fluoro-8-(methylamino)-2-oxo-1,2-dihydro… | monomer | 1×FKU; | ||||
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Crystal structure of E.coli DNA gyrase B in complex with 6-fluoro-8-(methylamino)-2-oxo-1,2-dihydro… | monomer | 1×FKR; | ||||
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E.coli GyrB24 with inhibitor LMD43 (EBL2560) | monomer | 1×PO4; 1×N1N; | ||||
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E.coli GyrB24 with inhibitor KOB20 (EBL2583) | monomer | 1×4Q6; 1×PO4; | ||||
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E.coli GyrB24 with inhibitor LSJ38 (EBL2684) | monomer | 1×PO4; 1×4R3; | ||||
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E. coli DNA Gyrase B 24 kDa ATPase domain in complex with 1-ethyl-3-[5-pyridin-4-yl-8-(pyridin-3-yl… | monomer | 1×G3Z; | ||||
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E.coli GyrB24 with inhibitor LMD92 (EBL2682) | monomer | 1×4QR; 1×TRS; 1×MG; | ||||
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NOVOBIOCIN-RESISTANT MUTANT (R136H) OF THE N-TERMINAL 24 KDA FRAGMENT OF DNA GYRASE B COMPLEXED WIT… | monomer | 1×NOV; | ||||
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S.aureus GyrB ATPase domain in complex with 4,6-dichloro-2-(methylthio)pyrimidine | monomer | 1×HX5; 4×SO4; | ||||
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Crystal Structure of E. coli GyraseB 24kDa in complex with 4-(4-bromo-1H-pyrazol-1-yl)-6-[(ethylcar… | monomer | 1×CWW; | ||||
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Crystal Structure of E. coli GyraseB 24kDa in complex with 6-[(ethylcarbamoyl)amino]-4-(1H-pyrazol-… | monomer | 1×CZ5; | ||||
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Crystal Structure of E. coli 24kDa Domain in Complex with Clorobiocin | monomer | 1×CBN; | ||||
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Crystal Structure of E. coli GyraseB 24kDa in complex with 6-[(ethylcarbamoyl)amino]-4-[(3-methyphe… | monomer | 1×D0H; | ||||
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Crystal Structure of E. coli GyraseB 24kDa in complex with 6-[(ethylcarbamoyl)amino]-4-[(4-methoxyp… | monomer | 1×D0K; | ||||
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Bacterial GyrB ATPase domain in complex with a chemical fragment | monomer | 1×BZ2; 8×SO4; | ||||
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Bacterial GyrB ATPase domain in complex with a chemical fragment | monomer | 2×PO4; 1×8H8; | ||||
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Pyrrolopyrimidine inhibitors of dna gyrase b and topoisomerase iv, part i: structure guided discove… | monomer | 1×1A1; 1×MG; | ||||
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Crystal structure of 24 kDa domain of E. coli DNA gyrase B in complex with small molecule inhibitor | monomer | 1×RLI; | ||||
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Bacterial GyrB ATPase domain in complex with a chemical fragment | monomer | 1×HX8; 3×PO4; 1×AX7; | ||||
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Bacterial GyrB ATPase domain in complex with a chemical fragment | monomer | 2×PO4; 1×0R0; 1×AX7; | ||||
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Bacterial GyrB ATPase domain in complex with a chemical fragment | monomer | 3×PO4; 1×HX4; 1×AX7; | ||||
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Bacterial GyrB ATPase domain in complex with a chemical fragment | monomer | 3×PO4; 1×27K; | ||||
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Bacterial GyrB ATPase domain in complex with a chemical fragment | monomer | 2×PO4; 1×A8K; 1×AX7; | ||||
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Bacterial GyrB ATPase domain in complex with (3,4-dichlorophenyl)hydrazine | monomer | 2×PO4; 1×HX3; 1×AX7; | ||||
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2 SWISS-MODEL models
Template | Oligo-state | QMEANDisCo | Range | Ligands | Trg-Tpl Seq id (%) | |
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7pqi.1.A | monomer | 0.80 | 79.13 | |||
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7z9c.1.D | monomer | 0.73 | 100.00 | |||
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