P0C6U3 (R1A_CVHN1) Human coronavirus HKU1 (isolate N1) (HCoV-HKU1)
Replicase polyprotein 1a UniProtKBInterProInteractive Modelling
4471 aa; Sequence (Fasta)
Molecule Processing
| Non-structural protein 1 | |
| Non-structural protein 2 | |
| Non-structural protein 3 | |
| Non-structural protein 4 | |
| 3C-like proteinase | |
| Non-structural protein 6 | |
| Non-structural protein 7 | |
| Non-structural protein 8 | |
| Non-structural protein 9 | |
| Non-structural protein 10 | |
| Non-structural protein 11 |
It is possible new templates exist for this target since these models were created.
Sequence Features
| 1161 | For PL1-PRO activity | ||
| 1312 | For PL1-PRO activity | ||
| 1757 | For PL2-PRO activity | ||
| 1914 | For PL2-PRO activity | ||
| 3375 | For 3CL-PRO activity | ||
| 3479 | For 3CL-PRO activity | ||
| 2226-2246 | Helical | ||
| 2287-2307 | Helical | ||
| 2318-2338 | Helical | ||
| 2401-2421 | Helical | ||
| 2443-2463 | Helical | ||
| 2844-2864 | Helical | ||
| 3119-3139 | Helical | ||
| 3151-3171 | Helical | ||
| 3178-3198 | Helical | ||
| 3203-3223 | Helical | ||
| 3651-3671 | Helical | ||
| 3676-3696 | Helical | ||
| 3701-3721 | Helical | ||
| 3744-3764 | Helical | ||
| 3772-3792 | Helical | ||
| 3800-3820 | Helical | ||
| 3843-3863 | Helical | ||
| 1238-1266 | C4-type 1 | ||
| 1835-1871 | C4-type 2 | ||
| 4394-4410 | |||
| 4436-4449 | |||
| 222-223 | Cleavage; by PL1-PRO | ||
| 809-810 | Cleavage; by PL1-PRO | ||
| 2838-2839 | Cleavage; by PL2-PRO | ||
| 3334-3335 | Cleavage; by 3CL-PRO | ||
| 3637-3638 | Cleavage; by 3CL-PRO | ||
| 3924-3925 | Cleavage; by 3CL-PRO | ||
| 4016-4017 | Cleavage; by 3CL-PRO | ||
| 4210-4211 | Cleavage; by 3CL-PRO | ||
| 4320-4321 | Cleavage; by 3CL-PRO | ||
| 4457-4458 | Cleavage; by 3CL-PRO | ||
| 1-330 | Betacoronavirus NSP1 IPR022570PF11963 | ||
| 646-809 | Non-structural protein 2, C-terminal domain, coronavirus IPR043613PF19212 | ||
| 1124-1372 | Peptidase C30/C16, Betacoronavirus IPR002705PF01831 | ||
| 1384-1488 | Macro domain IPR002589PF01661 | ||
| 1649-1951 | Peptidase C16, coronavirus IPR013016PF08715 | ||
| 1986-2102 | Non-structural protein NSP3, nucleic acid-binding (NAR) domain, betacoronavirus IPR032592PF16251 | ||
| 2338-2823 | Coronavirus replicase NSP3, C-terminal IPR043611PF19218 | ||
| 2860-3216 | Coronavirus replicase NSP4, N-terminal IPR043612PF19217 | ||
| 3245-3332 | Non-structural protein NSP4, C-terminal, coronavirus IPR032505PF16348 | ||
| 3363-3650 | Peptidase C30, coronavirus IPR008740PF05409 | ||
| 3665-3924 | Non-structural protein 6, coronavirus IPR043610PF19213 | ||
| 3925-4013 | Non-structural protein NSP7, coronavirus IPR014828PF08716 | ||
| 4014-4204 | Non-structural protein NSP8, coronavirus-like IPR014829PF08717 | ||
| 4211-4320 | Non-structural protein NSP9, coronavirus IPR014822PF08710 | ||
| 4329-4449 | RNA synthesis protein NSP10, coronavirus IPR018995PF09401 |
Sequence Alignments
Non-structural protein 3 810-2838; PRO_0000338197
| Oligo-state | Ligands | QMEAN | Template | Range | Seq id (%) |
|---|---|---|---|---|---|
| monomer | 1×ZN; | -1.23 | 4ypt.1.A | 64.25 | |
| Assess | |||||
3C-like proteinase 3335-3637; PRO_0000338199
| Description | Oligo-state | Ligands | Structure | Range | |
|---|---|---|---|---|---|
| Main protease of HCoV-HKU1 | homo-4-mer | 3d23 | |||
| Assess | |||||