P0C6V0 (R1A_CVMA5) Murine coronavirus (strain A59) (MHV-A59) (Murine hepatitis virus)

Replicase polyprotein 1a UniProtKBInterProInteractive Modelling

4468 aa; Sequence (Fasta)

Molecule Processing
Non-structural protein 1
Non-structural protein 2
Non-structural protein 3
Non-structural protein 4
3C-like proteinase
Non-structural protein 6
Non-structural protein 7
Non-structural protein 8
Non-structural protein 9
Non-structural protein 10
Non-structural protein 11

Sequence Features

Add
 1121For PL1-PRO activity
 1272For PL1-PRO activity
 1716For PL2-PRO activity
 1873For PL2-PRO activity
 3374For 3CL-PRO activity
 3478For 3CL-PRO activity
 4391Zinc 1
 4394Zinc 1
 4400Zinc 1
 4407Zinc 1
 4433Zinc 2
 4436Zinc 2
 4444Zinc 2
 4446Zinc 2
 1699P -> S (in strain: Isolate C12 mutant)
 2196M -> K (in strain: Isolate C12 mutant)
 2286-2306Helical
 2314-2334Helical
 2400-2420Helical
 2442-2462Helical
 2625-2645Helical
 2847-2867Helical
 3096-3116Helical
 3118-3138Helical
 3150-3170Helical
 3177-3197Helical
 3202-3222Helical
 3644-3664Helical
 3674-3694Helical
 3699-3719Helical
 3742-3762Helical
 3769-3789Helical
 3796-3816Helical
 3840-3860Helical
 1198-1226C4-type 1
 1794-1830C4-type 2
 4391-4407
 4433-4446
 247-248Cleavage; by PL1-PRO
 832-833Cleavage; by PL1-PRO
 2837-2838Cleavage; by PL2-PRO
 3333-3334Cleavage; by 3CL-PRO
 3635-3636Cleavage; by 3CL-PRO
 3921-3922Cleavage; by 3CL-PRO
 4013-4014Cleavage; by 3CL-PRO
 4207-4208Cleavage; by 3CL-PRO
 4317-4318Cleavage; by 3CL-PRO
 4454-4455Cleavage; by 3CL-PRO
 1-355Betacoronavirus NSP1
IPR022570PF11963
 671-832Non-structural protein 2, C-terminal domain, coronavirus
IPR043613PF19212
 952-1074Betacoronavirus NSP1
IPR022570PF11963
 1084-1332Peptidase C30/C16, Betacoronavirus
IPR002705PF01831
 1344-1449Macro domain
IPR002589PF01661
 1611-1913Peptidase C16, coronavirus
IPR013016PF08715
 1945-2061Non-structural protein NSP3, nucleic acid-binding (NAR) domain, betacoronavirus
IPR032592PF16251
 2337-2822Coronavirus replicase NSP3, C-terminal
IPR043611PF19218
 2859-3215Coronavirus replicase NSP4, N-terminal
IPR043612PF19217
 3237-3331Non-structural protein NSP4, C-terminal, coronavirus
IPR032505PF16348
 3362-3648Peptidase C30, coronavirus
IPR008740PF05409
 3663-3921Non-structural protein 6, coronavirus
IPR043610PF19213
 3922-4010Non-structural protein NSP7, coronavirus
IPR014828PF08716
 4011-4204Non-structural protein NSP8, coronavirus-like
IPR014829PF08717
 4208-4317Non-structural protein NSP9, coronavirus
IPR014822PF08710
 4326-4446RNA synthesis protein NSP10, coronavirus
IPR018995PF09401

Sequence Alignments

Non-structural protein 3 833-2837; PRO_0000338281

DescriptionOligo-stateLigandsStructureRange
Solution structure of MHV nsp3amonomer 2m0a 833-946
Assess
Oligo-stateLigandsQMEANTemplateRangeSeq id (%)
monomer ZN;-0.884ypt.1.A1533-1910
100.00
Assess

3C-like proteinase 3334-3635; PRO_0000338283

Oligo-stateLigandsQMEANTemplateRangeSeq id (%)
monomer 02J;-0.966jij.1.A3334-3631
99.67
Assess