P0C6V9 (R1AB_BC279) Bat coronavirus 279/2005 (BtCoV) (BtCoV/279/2005)
Replicase polyprotein 1ab UniProtKBInterProInteractive Modelling
7079 aa; Sequence (Fasta)
Molecule Processing
| Host translation inhibitor nsp1 | |
| Non-structural protein 2 | |
| Papain-like proteinase | |
| Non-structural protein 4 | |
| 3C-like proteinase | |
| Non-structural protein 6 | |
| Non-structural protein 7 | |
| Non-structural protein 8 | |
| Non-structural protein 9 | |
| Non-structural protein 10 | |
| RNA-directed RNA polymerase | |
| Helicase | |
| Guanine-N7 methyltransferase | |
| Uridylate-specific endoribonuclease | |
| 2'-O-methyltransferase |
It is possible new templates exist for this target since these models were created.
Sequence Features
| 1657 | For PL-PRO activity | ||
| 1818 | For PL-PRO activity | ||
| 3287 | For 3CL-PRO activity | ||
| 3391 | For 3CL-PRO activity | ||
| 5134 | |||
| 5135 | |||
| 5136 | |||
| 5998 | |||
| 6000 | |||
| 6099 | |||
| 6176 | |||
| 6181 | |||
| 6827 | |||
| 6911 | |||
| 6951 | |||
| 6984 | |||
| 4310 | Zinc 1 | ||
| 4313 | Zinc 1 | ||
| 4319 | Zinc 1 | ||
| 4326 | Zinc 1 | ||
| 4353 | Zinc 2 | ||
| 4356 | Zinc 2 | ||
| 4364 | Zinc 2 | ||
| 4366 | Zinc 2 | ||
| 5312 | Zinc 3 | ||
| 5315 | Zinc 3 | ||
| 5323 | Zinc 4 | ||
| 5326 | Zinc 3 | ||
| 5333 | Zinc 3 | ||
| 5336 | Zinc 4 | ||
| 5340 | Zinc 4 | ||
| 5346 | Zinc 4 | ||
| 5357 | Zinc 5 | ||
| 5362 | Zinc 5 | ||
| 5379 | Zinc 5 | ||
| 5382 | Zinc 5 | ||
| 6115 | Zinc 6 | ||
| 6118 | Zinc 6 | ||
| 6134 | Zinc 6 | ||
| 6137 | Zinc 6 | ||
| 6165 | Zinc 7 | ||
| 6169 | Zinc 7 | ||
| 6172 | Zinc 7 | ||
| 6187 | Zinc 7 | ||
| 6360 | Zinc 8 | ||
| 6381 | Zinc 8 | ||
| 6392 | Zinc 8 | ||
| 6395 | Zinc 8 | ||
| 2209-2229 | Helical | ||
| 2310-2330 | Helical | ||
| 2357-2377 | Helical | ||
| 2761-2781 | Helical | ||
| 2998-3018 | Helical | ||
| 3028-3048 | Helical | ||
| 3060-3080 | Helical | ||
| 3083-3103 | Helical | ||
| 3111-3131 | Helical | ||
| 3148-3168 | Helical | ||
| 3570-3590 | Helical | ||
| 3592-3612 | Helical | ||
| 3618-3638 | Helical | ||
| 3665-3684 | Helical | ||
| 3691-3710 | Helical | ||
| 3734-3754 | Helical | ||
| 3762-3782 | Helical | ||
| 1735-1772 | C4-type | ||
| 4310-4326 | |||
| 4353-4366 | |||
| 5589-5596 | ATP | ||
| 179-180 | Cleavage | ||
| 818-819 | Cleavage; by PL-PRO | ||
| 3246-3247 | Cleavage; by PL-PRO | ||
| 3552-3553 | Cleavage; by 3CL-PRO | ||
| 3842-3843 | Cleavage; by 3CL-PRO | ||
| 3925-3926 | Cleavage; by 3CL-PRO | ||
| 4123-4124 | Cleavage; by 3CL-PRO | ||
| 4236-4237 | Cleavage; by 3CL-PRO | ||
| 4375-4376 | Cleavage; by 3CL-PRO | ||
| 5307-5308 | Cleavage; by 3CL-PRO | ||
| 5908-5909 | Cleavage; by 3CL-PRO | ||
| 6435-6436 | Cleavage; by 3CL-PRO | ||
| 6781-6782 | Cleavage; by 3CL-PRO | ||
| 10-144 | Non-structural protein NSP1, betacoronavirus IPR021590PF11501 | ||
| 183-423 | Nonstructural protein 2, N-terminal domain, coronavirus IPR043615PF19211 | ||
| 652-818 | Non-structural protein 2, C-terminal domain, coronavirus IPR043613PF19212 | ||
| 881-1026 | Non-structural protein NSP3, N-terminal, betacoronavirus IPR024358PF12379 | ||
| 1034-1139 | Macro domain IPR002589PF01661 | ||
| 1333-1475 | Non-structural protein NSP3, SUD-M domain, betacoronavirus IPR024375PF11633 | ||
| 1479-1544 | DPUP/SUD, C-terminal, betacoronavirus IPR022733PF12124 | ||
| 1547-1865 | Peptidase C16, coronavirus IPR013016PF08715 | ||
| 1900-2002 | Non-structural protein NSP3, nucleic acid-binding (NAR) domain, betacoronavirus IPR032592PF16251 | ||
| 2244-2731 | Coronavirus replicase NSP3, C-terminal IPR043611PF19218 | ||
| 2771-3124 | Coronavirus replicase NSP4, N-terminal IPR043612PF19217 | ||
| 3149-3244 | Non-structural protein NSP4, C-terminal, coronavirus IPR032505PF16348 | ||
| 3275-3565 | Peptidase C30, coronavirus IPR008740PF05409 | ||
| 3581-3842 | Non-structural protein 6, coronavirus IPR043610PF19213 | ||
| 3843-3925 | Non-structural protein NSP7, coronavirus IPR014828PF08716 | ||
| 3926-4122 | Non-structural protein NSP8, coronavirus-like IPR014829PF08717 | ||
| 4124-4236 | Non-structural protein NSP9, coronavirus IPR014822PF08710 | ||
| 4245-4367 | RNA synthesis protein NSP10, coronavirus IPR018995PF09401 | ||
| 4390-4741 | RNA polymerase, N-terminal, coronaviral IPR009469PF06478 | ||
| 4775-5263 | RNA-directed RNA polymerase, C-terminal domain IPR001205PF00680 | ||
| 5655-5879 | (+) RNA virus helicase core domain IPR027351PF01443 | ||
| 5912-6433 | Non-structural protein 14, coronavirus IPR009466PF06471 | ||
| 6436-6496 | Coronavirus replicase NSP15, N-terminal oligomerisation IPR043606PF19219 | ||
| 6506-6602 | Coronavirus replicase NSP15, middle domain IPR043608PF19216 | ||
| 6627-6779 | NendoU domain, nidovirus IPR043609PF19215 | ||
| 6783-7078 | Non-structural protein NSP16, coronavirus-like IPR009461PF06460 |
Sequence Alignments
Papain-like proteinase 819-2746; PRO_0000289898
| Oligo-state | Ligands | QMEAN | Template | Range | Seq id (%) |
|---|---|---|---|---|---|
| monomer | 1×ZN; | -0.65 | 5tl6.1.A | 93.33 | |
| Assess | |||||
3C-like proteinase 3247-3552; PRO_0000289900
| Oligo-state | Ligands | QMEAN | Template | Range | Seq id (%) |
|---|---|---|---|---|---|
| monomer | 0.11 | 2gt8.1.A | 99.35 | ||
| Assess | |||||
RNA-directed RNA polymerase 4376-5307; PRO_0000289906
| Oligo-state | Ligands | QMEAN | Template | Range | Seq id (%) |
|---|---|---|---|---|---|
| monomer | 2×ZN; | -1.59 | 7c2k.1.A | 95.92 | |
| Assess | |||||
Helicase 5308-5908; PRO_0000289907
| Oligo-state | Ligands | QMEAN | Template | Range | Seq id (%) |
|---|---|---|---|---|---|
| monomer | 3×ZN; | -4.62 | 6jyt.1.A | 99.50 | |
| Assess | |||||
Guanine-N7 methyltransferase 5909-6435; PRO_0000289908
| Oligo-state | Ligands | QMEAN | Template | Range | Seq id (%) |
|---|---|---|---|---|---|
| monomer | 3×ZN; | -2.70 | 5nfy.3.A | 98.10 | |
| Assess | |||||
Uridylate-specific endoribonuclease 6436-6781; PRO_0000289909
| Oligo-state | Ligands | QMEAN | Template | Range | Seq id (%) |
|---|---|---|---|---|---|
| monomer | -0.35 | 2rhb.1.A | 98.27 | ||
| Assess | |||||