P0C6W2 (R1AB_BCHK3) Bat coronavirus HKU3 (BtCoV) (SARS-like coronavirus HKU3)
Replicase polyprotein 1ab UniProtKBInterProInteractive Modelling
7067 aa; Sequence (Fasta) Identical sequences: Bat SARS coronavirus HKU3-3: Q3LZT8
Molecule Processing
Host translation inhibitor nsp1 | |
Non-structural protein 2 | |
Papain-like proteinase | |
Non-structural protein 4 | |
3C-like proteinase | |
Non-structural protein 6 | |
Non-structural protein 7 | |
Non-structural protein 8 | |
Non-structural protein 9 | |
Non-structural protein 10 | |
RNA-directed RNA polymerase | |
Helicase | |
Guanine-N7 methyltransferase | |
Uridylate-specific endoribonuclease | |
2'-O-methyltransferase |
It is possible new templates exist for this target since these models were created.
Sequence Features
1645 | For PL-PRO activity | ||
1806 | For PL-PRO activity | ||
3275 | For 3CL-PRO activity | ||
3379 | For 3CL-PRO activity | ||
5300 | Zinc 1 | ||
5303 | Zinc 1 | ||
5311 | Zinc 2 | ||
5314 | Zinc 1 | ||
5321 | Zinc 1 | ||
5324 | Zinc 2 | ||
5328 | Zinc 2 | ||
5334 | Zinc 2 | ||
5345 | Zinc 3 | ||
5350 | Zinc 3 | ||
5367 | Zinc 3 | ||
5370 | Zinc 3 | ||
2197-2217 | Helical | ||
2298-2318 | Helical | ||
2345-2365 | Helical | ||
2744-2764 | Helical | ||
2986-3006 | Helical | ||
3016-3036 | Helical | ||
3048-3068 | Helical | ||
3071-3091 | Helical | ||
3099-3119 | Helical | ||
3136-3156 | Helical | ||
3558-3578 | Helical | ||
3580-3600 | Helical | ||
3606-3626 | Helical | ||
3652-3672 | Helical | ||
3679-3698 | Helical | ||
3722-3742 | Helical | ||
3750-3770 | Helical | ||
1723-1760 | C4-type | ||
4298-4314 | |||
4341-4354 | |||
5577-5584 | ATP | ||
179-180 | Cleavage; by PL-PRO | ||
818-819 | Cleavage; by PL-PRO | ||
3234-3235 | Cleavage; by 3CL-PRO | ||
3540-3541 | Cleavage; by 3CL-PRO | ||
3830-3831 | Cleavage; by 3CL-PRO | ||
3913-3914 | Cleavage; by 3CL-PRO | ||
4111-4112 | Cleavage; by 3CL-PRO | ||
4224-4225 | Cleavage; by 3CL-PRO | ||
4363-4364 | Cleavage; by 3CL-PRO | ||
5295-5296 | Cleavage; by 3CL-PRO | ||
5896-5897 | Cleavage; by 3CL-PRO | ||
6423-6424 | Cleavage; by 3CL-PRO | ||
6769-6770 | Cleavage; by 3CL-PRO | ||
8-144 | Non-structural protein NSP1, betacoronavirus IPR021590PF11501 | ||
183-423 | Nonstructural protein 2, N-terminal domain, coronavirus IPR043615PF19211 | ||
652-818 | Non-structural protein 2, C-terminal domain, coronavirus IPR043613PF19212 | ||
881-1024 | Non-structural protein NSP3, N-terminal, betacoronavirus IPR024358PF12379 | ||
1031-1136 | Macro domain IPR002589PF01661 | ||
1321-1463 | Non-structural protein NSP3, SUD-M domain, betacoronavirus IPR024375PF11633 | ||
1468-1532 | DPUP/SUD, C-terminal, betacoronavirus IPR022733PF12124 | ||
1535-1853 | Peptidase C16, coronavirus IPR013016PF08715 | ||
1888-1990 | Non-structural protein NSP3, nucleic acid-binding (NAR) domain, betacoronavirus IPR032592PF16251 | ||
2232-2719 | Coronavirus replicase NSP3, C-terminal IPR043611PF19218 | ||
2759-3112 | Coronavirus replicase NSP4, N-terminal IPR043612PF19217 | ||
3137-3232 | Non-structural protein NSP4, C-terminal, coronavirus IPR032505PF16348 | ||
3263-3553 | Peptidase C30, coronavirus IPR008740PF05409 | ||
3569-3830 | Non-structural protein 6, coronavirus IPR043610PF19213 | ||
3831-3913 | Non-structural protein NSP7, coronavirus IPR014828PF08716 | ||
3914-4110 | Non-structural protein NSP8, coronavirus-like IPR014829PF08717 | ||
4112-4224 | Non-structural protein NSP9, coronavirus IPR014822PF08710 | ||
4233-4355 | RNA synthesis protein NSP10, coronavirus IPR018995PF09401 | ||
4378-4729 | RNA polymerase, N-terminal, coronaviral IPR009469PF06478 | ||
4763-5251 | RNA-directed RNA polymerase, C-terminal domain IPR001205PF00680 | ||
5643-5867 | (+) RNA virus helicase core domain IPR027351PF01443 | ||
5900-6421 | Non-structural protein 14, coronavirus IPR009466PF06471 | ||
6424-6484 | Coronavirus replicase NSP15, N-terminal oligomerisation IPR043606PF19219 | ||
6494-6590 | Coronavirus replicase NSP15, middle domain IPR043608PF19216 | ||
6615-6767 | NendoU domain, nidovirus IPR043609PF19215 | ||
6771-7066 | Non-structural protein NSP16, coronavirus-like IPR009461PF06460 |
Sequence Alignments
Papain-like proteinase 819-2734; PRO_0000291337
Oligo-state | Ligands | QMEAN | Template | Range | Seq id (%) |
---|---|---|---|---|---|
monomer | -1.44 | 5e6j.1.A | 96.84 | ||
Assess |
3C-like proteinase 3235-3540; PRO_0000291339
Oligo-state | Ligands | QMEAN | Template | Range | Seq id (%) |
---|---|---|---|---|---|
monomer | 0.09 | 2amd.1.B | 99.35 | ||
Assess |
RNA-directed RNA polymerase 4364-5295; PRO_0000291345
Oligo-state | Ligands | QMEAN | Template | Range | Seq id (%) |
---|---|---|---|---|---|
monomer | 2×ZN; | -1.56 | 7c2k.1.A | 95.60 | |
Assess |
Guanine-N7 methyltransferase 5897-6423; PRO_0000291347
Oligo-state | Ligands | QMEAN | Template | Range | Seq id (%) |
---|---|---|---|---|---|
monomer | 3×ZN; | -2.86 | 5nfy.3.A | 97.91 | |
Assess |
Uridylate-specific endoribonuclease 6424-6769; PRO_0000291348
Oligo-state | Ligands | QMEAN | Template | Range | Seq id (%) |
---|---|---|---|---|---|
monomer | 0.05 | 6xdh.1.A | 88.15 | ||
Assess |