P0C6W2 (R1AB_BCHK3) Bat coronavirus HKU3 (BtCoV) (SARS-like coronavirus HKU3)
Replicase polyprotein 1ab UniProtKBInterProInteractive Modelling
7067 aa; Sequence (Fasta) Identical sequences: Bat SARS coronavirus HKU3-3: Q3LZT8
Molecule Processing
| Host translation inhibitor nsp1 | |
| Non-structural protein 2 | |
| Papain-like proteinase | |
| Non-structural protein 4 | |
| 3C-like proteinase | |
| Non-structural protein 6 | |
| Non-structural protein 7 | |
| Non-structural protein 8 | |
| Non-structural protein 9 | |
| Non-structural protein 10 | |
| RNA-directed RNA polymerase | |
| Helicase | |
| Guanine-N7 methyltransferase | |
| Uridylate-specific endoribonuclease | |
| 2'-O-methyltransferase |
It is possible new templates exist for this target since these models were created.
Sequence Features
| 1645 | For PL-PRO activity | ||
| 1806 | For PL-PRO activity | ||
| 3275 | For 3CL-PRO activity | ||
| 3379 | For 3CL-PRO activity | ||
| 5300 | Zinc 1 | ||
| 5303 | Zinc 1 | ||
| 5311 | Zinc 2 | ||
| 5314 | Zinc 1 | ||
| 5321 | Zinc 1 | ||
| 5324 | Zinc 2 | ||
| 5328 | Zinc 2 | ||
| 5334 | Zinc 2 | ||
| 5345 | Zinc 3 | ||
| 5350 | Zinc 3 | ||
| 5367 | Zinc 3 | ||
| 5370 | Zinc 3 | ||
| 2197-2217 | Helical | ||
| 2298-2318 | Helical | ||
| 2345-2365 | Helical | ||
| 2744-2764 | Helical | ||
| 2986-3006 | Helical | ||
| 3016-3036 | Helical | ||
| 3048-3068 | Helical | ||
| 3071-3091 | Helical | ||
| 3099-3119 | Helical | ||
| 3136-3156 | Helical | ||
| 3558-3578 | Helical | ||
| 3580-3600 | Helical | ||
| 3606-3626 | Helical | ||
| 3652-3672 | Helical | ||
| 3679-3698 | Helical | ||
| 3722-3742 | Helical | ||
| 3750-3770 | Helical | ||
| 1723-1760 | C4-type | ||
| 4298-4314 | |||
| 4341-4354 | |||
| 5577-5584 | ATP | ||
| 179-180 | Cleavage; by PL-PRO | ||
| 818-819 | Cleavage; by PL-PRO | ||
| 3234-3235 | Cleavage; by 3CL-PRO | ||
| 3540-3541 | Cleavage; by 3CL-PRO | ||
| 3830-3831 | Cleavage; by 3CL-PRO | ||
| 3913-3914 | Cleavage; by 3CL-PRO | ||
| 4111-4112 | Cleavage; by 3CL-PRO | ||
| 4224-4225 | Cleavage; by 3CL-PRO | ||
| 4363-4364 | Cleavage; by 3CL-PRO | ||
| 5295-5296 | Cleavage; by 3CL-PRO | ||
| 5896-5897 | Cleavage; by 3CL-PRO | ||
| 6423-6424 | Cleavage; by 3CL-PRO | ||
| 6769-6770 | Cleavage; by 3CL-PRO | ||
| 8-144 | Non-structural protein NSP1, betacoronavirus IPR021590PF11501 | ||
| 183-423 | Nonstructural protein 2, N-terminal domain, coronavirus IPR043615PF19211 | ||
| 652-818 | Non-structural protein 2, C-terminal domain, coronavirus IPR043613PF19212 | ||
| 881-1024 | Non-structural protein NSP3, N-terminal, betacoronavirus IPR024358PF12379 | ||
| 1031-1136 | Macro domain IPR002589PF01661 | ||
| 1321-1463 | Non-structural protein NSP3, SUD-M domain, betacoronavirus IPR024375PF11633 | ||
| 1468-1532 | DPUP/SUD, C-terminal, betacoronavirus IPR022733PF12124 | ||
| 1535-1853 | Peptidase C16, coronavirus IPR013016PF08715 | ||
| 1888-1990 | Non-structural protein NSP3, nucleic acid-binding (NAR) domain, betacoronavirus IPR032592PF16251 | ||
| 2232-2719 | Coronavirus replicase NSP3, C-terminal IPR043611PF19218 | ||
| 2759-3112 | Coronavirus replicase NSP4, N-terminal IPR043612PF19217 | ||
| 3137-3232 | Non-structural protein NSP4, C-terminal, coronavirus IPR032505PF16348 | ||
| 3263-3553 | Peptidase C30, coronavirus IPR008740PF05409 | ||
| 3569-3830 | Non-structural protein 6, coronavirus IPR043610PF19213 | ||
| 3831-3913 | Non-structural protein NSP7, coronavirus IPR014828PF08716 | ||
| 3914-4110 | Non-structural protein NSP8, coronavirus-like IPR014829PF08717 | ||
| 4112-4224 | Non-structural protein NSP9, coronavirus IPR014822PF08710 | ||
| 4233-4355 | RNA synthesis protein NSP10, coronavirus IPR018995PF09401 | ||
| 4378-4729 | RNA polymerase, N-terminal, coronaviral IPR009469PF06478 | ||
| 4763-5251 | RNA-directed RNA polymerase, C-terminal domain IPR001205PF00680 | ||
| 5643-5867 | (+) RNA virus helicase core domain IPR027351PF01443 | ||
| 5900-6421 | Non-structural protein 14, coronavirus IPR009466PF06471 | ||
| 6424-6484 | Coronavirus replicase NSP15, N-terminal oligomerisation IPR043606PF19219 | ||
| 6494-6590 | Coronavirus replicase NSP15, middle domain IPR043608PF19216 | ||
| 6615-6767 | NendoU domain, nidovirus IPR043609PF19215 | ||
| 6771-7066 | Non-structural protein NSP16, coronavirus-like IPR009461PF06460 |
Sequence Alignments
Papain-like proteinase 819-2734; PRO_0000291337
| Oligo-state | Ligands | QMEAN | Template | Range | Seq id (%) |
|---|---|---|---|---|---|
| monomer | -1.44 | 5e6j.1.A | 96.84 | ||
| Assess | |||||
3C-like proteinase 3235-3540; PRO_0000291339
| Oligo-state | Ligands | QMEAN | Template | Range | Seq id (%) |
|---|---|---|---|---|---|
| monomer | 0.09 | 2amd.1.B | 99.35 | ||
| Assess | |||||
RNA-directed RNA polymerase 4364-5295; PRO_0000291345
| Oligo-state | Ligands | QMEAN | Template | Range | Seq id (%) |
|---|---|---|---|---|---|
| monomer | 2×ZN; | -1.56 | 7c2k.1.A | 95.60 | |
| Assess | |||||
Guanine-N7 methyltransferase 5897-6423; PRO_0000291347
| Oligo-state | Ligands | QMEAN | Template | Range | Seq id (%) |
|---|---|---|---|---|---|
| monomer | 3×ZN; | -2.86 | 5nfy.3.A | 97.91 | |
| Assess | |||||
Uridylate-specific endoribonuclease 6424-6769; PRO_0000291348
| Oligo-state | Ligands | QMEAN | Template | Range | Seq id (%) |
|---|---|---|---|---|---|
| monomer | 0.05 | 6xdh.1.A | 88.15 | ||
| Assess | |||||