P0CX43 (RL1A_YEAST) Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)

Large ribosomal subunit protein uL1A UniProtKBInterProSTRINGInteractive Modelling

217 aa; Sequence (Fasta) ; 13 identical sequences

Available Structures

22 Experimental Structures

DescriptionPDB IDOligo-stateRangeLigands
CRYO-EM STRUCTURE OF THE RIX1-REA1 PRE-60S PARTICLE
5jcs
 Heteromer
P02406; P04456; P04650; P05737; P05738; P05740; P05743; P05744; P05745; P05748; P05749; P0C0W9; P0C2H6; P0C2H8; P0CX23; P0CX25; P0CX41; P0CX45; P0CX49; P0CX53; P0CX82; P0CX84; P10664; P14120; P14126; P17076; P25382; P26321; P26784; P33201; P36105; P38061; P49166; P49167; P53313; P87262; Q02326; Q02753; Q02892; Q03862; Q07915; Q12019; Q12522; Q12690; 		1-217
Assess
Arx1 pre-60S particle.
4v7f
 Heteromer
P02406; P04456; P04650; P05737; P05738; P05740; P05743; P05744; P05745; P05748; P05749; P0C0W9; P0C2H6; P0C2H8; P0CX23; P0CX25; P0CX41; P0CX45; P0CX49; P0CX53; P0CX82; P0CX84; P10664; P14120; P14126; P17076; P25382; P26321; P26784; P33201; P36105; P38061; P40693; P49166; P49167; P87262; Q02326; Q02753; Q02892; Q03862; Q07915; Q12522; Q12690; 		1-217
Assess
NPC-trapped pre-60S particle
8hfr
 Heteromer
P02406; P04456; P04650; P05737; P05738; P05740; P05743; P05744; P05745; P05747; P05748; P05749; P0C0W9; P0C2H6; P0C2H8; P0CX23; P0CX25; P0CX27; P0CX41; P0CX45; P0CX49; P0CX53; P0CX82; P0CX84; P10664; P14120; P14126; P17076; P26321; P26784; P33201; P34232; P36105; P38061; P38202; P38861; P39715; P40078; P47019; P49166; P49167; P53742; P87262; Q02326; Q02753; Q02892; Q03862; Q07915; Q08004; Q08687; Q12522; Q12690; Q99257; 		1-217
237×MG;
Assess
Yeast RQC complex in state F
8agt
 Heteromer
P02406; P04449; P04456; P04650; P05317; P05737; P05738; P05739; P05740; P05743; P05744; P05745; P05747; P05748; P05749; P0C0W9; P0C2H6; P0C2H8; P0CH08; P0CX23; P0CX25; P0CX27; P0CX41; P0CX45; P0CX49; P0CX53; P0CX82; P0CX84; P0CX86; P10664; P14120; P14126; P17076; P23301; P26321; P26784; P36105; P38061; P41805; P49166; P49167; P87262; Q02753; Q04781; Q12522; Q12532; Q12690; 		2-217
13×MG; 7×ZN;
Assess
Yeast RQC complex in state with the RING domain of Ltn1 in the IN position
8agx
 Heteromer
P02406; P04449; P04456; P04650; P05317; P05737; P05738; P05739; P05740; P05743; P05744; P05745; P05747; P05748; P05749; P0C0W9; P0C2H6; P0C2H8; P0CH08; P0CX23; P0CX25; P0CX27; P0CX41; P0CX45; P0CX49; P0CX53; P0CX82; P0CX84; P0CX86; P10664; P14120; P14126; P17076; P23301; P26321; P26784; P36105; P38061; P41805; P49166; P49167; P87262; Q02753; Q04781; Q12532; Q12690; 		2-217
13×MG; 7×ZN; 1×SPD;
Assess
Yeast RQC complex in state E
8agu
 Heteromer
P02406; P04449; P04456; P04650; P05317; P05737; P05738; P05739; P05740; P05743; P05744; P05745; P05747; P05748; P05749; P0C0W9; P0C2H6; P0C2H8; P0CH08; P0CX23; P0CX25; P0CX27; P0CX41; P0CX45; P0CX49; P0CX54; P0CX82; P0CX84; P0CX86; P10664; P14120; P14126; P17076; P23301; P26321; P26784; P36105; P38061; P41805; P49166; P49167; P87262; Q02753; Q04781; Q12522; Q12532; Q12690; 		2-217
13×MG; 7×ZN; 1×SPD;
Assess
Yeast RQC complex in state G
8aaf
 Heteromer
P02406; P04449; P04456; P04650; P05317; P05737; P05738; P05739; P05740; P05743; P05744; P05745; P05747; P05748; P05749; P0C0W9; P0C2H6; P0C2H8; P0CH08; P0CX23; P0CX25; P0CX27; P0CX41; P0CX45; P0CX49; P0CX53; P0CX82; P0CX84; P0CX86; P10664; P14120; P14126; P17076; P23301; P26321; P26784; P36105; P38061; P41805; P49166; P49167; P87262; Q02753; Q04781; Q12522; Q12532; Q12690; 		2-217
13×MG; 7×ZN; 1×SPD;
Assess
Yeast RQC complex in state H
8agv
 Heteromer
P02406; P04449; P04456; P04650; P05317; P05737; P05738; P05739; P05740; P05743; P05744; P05745; P05747; P05748; P05749; P0C0W9; P0C2H6; P0C2H8; P0CH08; P0CX23; P0CX25; P0CX27; P0CX41; P0CX45; P0CX49; P0CX54; P0CX82; P0CX84; P0CX86; P10664; P14120; P14126; P17076; P23301; P26321; P26784; P36105; P38061; P41805; P49166; P49167; P87262; Q02753; Q04781; Q12522; Q12532; Q12690; 		2-217
13×MG; 7×ZN;
Assess
Yeast RQC complex in state with the RING domain of Ltn1 in the OUT position
8agz
 Heteromer
P02406; P04449; P04456; P04650; P05317; P05737; P05738; P05739; P05740; P05743; P05744; P05745; P05747; P05748; P05749; P0C0W9; P0C2H6; P0C2H8; P0CH08; P0CX23; P0CX25; P0CX27; P0CX41; P0CX45; P0CX49; P0CX53; P0CX82; P0CX84; P0CX86; P10664; P14120; P14126; P17076; P23301; P26321; P26784; P36105; P38061; P41805; P49166; P49167; P87262; Q02753; Q04781; Q12522; Q12532; Q12690; 		2-217
13×MG; 7×ZN; 1×SPD;
Assess
Yeast RQC complex in state D
8agw
 Heteromer
P02406; P04449; P04456; P04650; P05317; P05737; P05738; P05739; P05740; P05743; P05744; P05745; P05747; P05748; P05749; P0C0W9; P0C2H6; P0C2H8; P0CH08; P0CX23; P0CX25; P0CX27; P0CX41; P0CX45; P0CX49; P0CX53; P0CX82; P0CX84; P0CX86; P10664; P14120; P14126; P17076; P26321; P26784; P36105; P38061; P41805; P49166; P49167; P87262; Q02753; Q04781; Q12522; Q12532; Q12690; 		2-217
13×MG; 7×ZN; 1×SPD;
Assess
State E1 nucleolar 60S ribosome biogenesis intermediate - Composite model
7r7a
 Heteromer
P04456; P05737; P05738; P05740; P05743; P05744; P05745; P05748; P05749; P0C2H6; P0C2H8; P0CX23; P0CX41; P0CX49; P0CX82; P0CX84; P10664; P14120; P14126; P17076; P25582; P25808; P26784; P33201; P36049; P36105; P38061; P38202; P38779; P39744; P40007; P40010; P40078; P40693; P40991; P43586; P49166; P49167; P53261; P53927; P87262; Q02326; Q02753; Q02892; Q03532; Q04660; Q07896; Q07915; Q08235; Q08962; Q12024; Q12522; Q12690; 		4-217
2×ZN;
Assess
State E2 nucleolar 60S ribosomal biogenesis intermediate - Composite model
7nac
 Heteromer
P04456; P05737; P05738; P05740; P05743; P05744; P05745; P05748; P05749; P0C2H6; P0C2H8; P0CX23; P0CX41; P0CX49; P0CX82; P0CX84; P10664; P14120; P14126; P17076; P25582; P25808; P26784; P33201; P36049; P36105; P38061; P38202; P38779; P39744; P40007; P40010; P40078; P40693; P40991; P43586; P49166; P49167; P53261; P53927; P87262; Q02326; Q02753; Q02892; Q03532; Q04031; Q04660; Q07896; Q07915; Q08235; Q08962; Q12024; Q12522; Q12690; 		4-217
2×ZN; 1×SAH;
Assess
State E2 nucleolar 60S ribosomal biogenesis intermediate - L1 stalk local model
7r7c
 Heteromer
P25582; P36049; P40078; P40991; P43586; Q02892; Q04660; Q08235; Q08962; 		4-217
Assess
Structure of ribosome-bound cricket paralysis virus IRES RNA
2noq
 Heteromer
P26783; Q3E757; 		4-216
Assess
Core of mammalian 80S pre-ribosome in complex with tRNAs fitted to a 10.6A cryo-em map: rotated PRE…
3j0p
 Heteromer
4-216
Assess
Core of mammalian 80S pre-ribosome in complex with tRNAs fitted to a 10.6A cryo-em map: rotated PRE…
3j0q
 Heteromer
Q3E757; 		4-216
Assess
Rix1-Rea1 pre-60S particle - full composite structure
6ylh
 Heteromer
P02406; P04456; P04650; P05737; P05738; P05740; P05743; P05744; P05745; P05748; P05749; P0C0W9; P0C2H6; P0C2H8; P0CX23; P0CX25; P0CX41; P0CX45; P0CX49; P0CX53; P0CX82; P0CX84; P10664; P14120; P14126; P17076; P25382; P26321; P26784; P33201; P36105; P38061; P38202; P38803; P38883; P40010; P40078; P47019; P49166; P49167; P53188; P53313; P53742; P53877; P87262; Q02326; Q02753; Q02892; Q03862; Q07915; Q08004; Q12019; Q12522; Q12690; 		6-215
4×ZN; 2×GTP; 2×MG;
Assess
Rix1-Rea1 pre-60S particle - 60S core, body 1 (rigid body refinement)
6ylg
 Heteromer
P02406; P04456; P04650; P05737; P05738; P05740; P05743; P05744; P05745; P05748; P05749; P0C0W9; P0C2H6; P0C2H8; P0CX23; P0CX25; P0CX41; P0CX45; P0CX49; P0CX53; P0CX82; P0CX84; P10664; P14120; P14126; P17076; P25382; P26321; P26784; P33201; P36105; P38061; P38202; P38803; P40010; P40078; P47019; P49166; P49167; P53188; P53313; P53742; P87262; Q02326; Q02753; Q02892; Q03862; Q07915; Q08004; Q12522; Q12690; 		6-215
4×ZN; 2×GTP; 2×MG;
Assess
Yeast Vms1 (Q295L)-60S ribosomal subunit complex (pre-state with Arb1)
6r84
 Heteromer
P02406; P04449; P04456; P04650; P05317; P05737; P05738; P05740; P05743; P05744; P05745; P05747; P05748; P05749; P0C2H6; P0C2H8; P0CH08; P0CX23; P0CX25; P0CX27; P0CX41; P0CX45; P0CX49; P0CX53; P0CX82; P0CX84; P10664; P14120; P14126; P17076; P26321; P26784; P36105; P38061; P40024; P41805; P49166; P49167; P87262; Q02326; Q02753; Q04311; Q12522; Q12690; Q3E757; 		13-216
1×ZN;
Assess
Yeast Vms1 (Q295L)-60S ribosomal subunit complex (pre-state without Arb1)
6r87
 Heteromer
P02406; P04449; P04456; P04650; P05317; P05737; P05738; P05740; P05743; P05744; P05745; P05747; P05748; P05749; P0C2H6; P0C2H8; P0CH08; P0CX23; P0CX25; P0CX27; P0CX41; P0CX45; P0CX49; P0CX53; P0CX82; P0CX84; P10664; P14120; P14126; P17076; P26321; P26784; P36105; P38061; P41805; P49166; P49167; P87262; Q02326; Q02753; Q04311; Q12522; Q12690; Q3E757; 		13-216
1×ZN;
Assess
Yeast Vms1-60S ribosomal subunit complex (post-state)
6r86
 Heteromer
P02406; P04449; P04456; P04650; P05317; P05737; P05738; P05740; P05743; P05744; P05745; P05747; P05748; P05749; P0C2H6; P0C2H8; P0CH08; P0CX23; P0CX25; P0CX27; P0CX41; P0CX45; P0CX49; P0CX53; P0CX82; P0CX84; P10664; P14120; P14126; P17076; P26321; P26784; P36105; P38061; P41805; P49166; P49167; P87262; Q02326; Q02753; Q04311; Q12522; Q12690; Q3E757; 		13-216
1×ZN;
Assess
Subunit joining exposes nascent pre-40S rRNA for processing and quality control
6oig
 Heteromer
P02406; P04449; P04456; P04650; P05317; P05737; P05738; P05740; P05743; P05744; P05745; P05747; P05748; P05749; P0C2H6; P0C2H8; P0CH08; P0CX23; P0CX25; P0CX27; P0CX41; P0CX45; P0CX49; P0CX53; P0CX82; P0CX84; P10664; P14120; P14126; P17076; P26321; P26784; P36105; P38061; P41805; P49166; P49167; P87262; Q02326; Q02753; Q12690; Q3E757; 		13-216
Assess

1 SWISS-MODEL model

TemplateOligo-stateQMEANDisCoRangeLigandsTrg-Tpl Seq id (%)
8agv.1.lmonomer0.692-217
100.00
Assess