P20449 (DBP5_YEAST) Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
ATP-dependent RNA helicase DBP5 UniProtKBInterProSTRINGInteractive Modelling
482 aa; Sequence (Fasta) ;
5 identical sequences: Saccharomyces cerevisiae: N1NVR3, G2WMS7, A0A6A5Q6S4, A6ZNQ1; Saccharomyces pastorianus: A0A6C1E0I1
It is possible new templates exist for this target since these models were created.
Available Structures
10 Experimental Structures
Description | PDB ID | Oligo-state | Range | Ligands | ||
---|---|---|---|---|---|---|
S. cerevisiae dbp5 l327v bound to gle1 h337r and ip6 |
Heteromer Q12315; | 1×ADP; 3×IHP; | ||||
Assess | ||||||
S. cerevisiae dbp5 l327v bound to nup159, gle1 h337r, ip6 and adp |
Heteromer P40477; Q12315; | 1×ADP; 1×IHP; 1×MG; | ||||
Assess | ||||||
S. cerevisiae Dbp5 L327V C-terminal domain bound to Gle1 and IP6 |
Heteromer Q12315; | 1×SO4; 3×GOL; 1×IHP; | ||||
Assess | ||||||
S. cerevisiae Dbp5 L327V C-terminal domain bound to Gle1 H337R and IP6 |
Heteromer Q12315; | 1×SO4; 3×GOL; 1×IHP; | ||||
Assess | ||||||
S. cerevisiae Dbp5 bound to RNA and ADP BeF3 | monomer | 1×ADP; 3×MG; 1×BEF; 4×NO3; 1×GOL; | ||||
Assess | ||||||
S. cerevisiae Dbp5 L327V bound to RNA and ADP BeF3 | monomer | 1×ADP; 3×MG; 1×BEF; 5×NO3; | ||||
Assess | ||||||
S. cerevisiae Dbp5 bound to RNA and mant-ADP BeF3 | monomer | 1×M2A; 2×MG; 1×BEF; 2×NO3; | ||||
Assess | ||||||
solution structure of amino-terminal domain of Dbp5p | monomer | |||||
Assess | ||||||
solution structure of carboxyl-terminal domain of Dbp5p | monomer | |||||
Assess | ||||||
Structure of the C-terminal domain of the DEAD-box protein Dbp5 | monomer | |||||
Assess |
11 SWISS-MODEL models
Template | Oligo-state | QMEANDisCo | Range | Ligands | Trg-Tpl Seq id (%) | |
---|---|---|---|---|---|---|
3pew.1.A | monomer | 0.85 | 1×U; 1×ADP; 1×BEF; | 99.74 | ||
Assess | ||||||
4c9b.1.A | monomer | 0.73 | 41.81 | |||
Assess | ||||||
7pq0.1.B | monomer | 0.72 | 42.00 | |||
Assess | ||||||
6b4i.1.C | monomer | 0.70 | 51.84 | |||
Assess | ||||||
2hxy.1.A | monomer | 0.70 | 41.81 | |||
Assess | ||||||
4ct5.1.A | monomer | 0.69 | 31.32 | |||
Assess | ||||||
4kbf.1.A | monomer | 0.67 | 34.77 | |||
Assess | ||||||
4kbf.2.A | monomer | 0.66 | 34.77 | |||
Assess | ||||||
6o5f.1.A | monomer | 0.66 | 34.76 | |||
Assess | ||||||
4kbg.2.A | monomer | 0.65 | 34.77 | |||
Assess | ||||||
8dpe.1.A | monomer | 0.65 | 35.16 | |||
Assess |