P29991 (POLG_DEN27) Dengue virus type 2 (strain 16681-PDK53) (DENV-2)

Genome polyprotein UniProtKBInterproInteractive Modelling

3391 aa; Sequence (Fasta)

Sequence Features

 1526Charge relay system; for serine protease NS3 activity.
 1550Charge relay system; for serine protease NS3 activity.
 1610Charge relay system; for serine protease NS3 activity.
 2552For 2'-O-MTase activity.
 2637For 2'-O-MTase activity.
 2672For 2'-O-MTase activity.
 2708For 2'-O-MTase activity.
 2929Zinc 1.
 2933Zinc 1; via tele nitrogen.
 2938Zinc 1.
 2941Zinc 1.
 3203Zinc 2; via tele nitrogen.
 3219Zinc 2.
 3338Zinc 2.
 1932Involved in NS3 ATPase and RTPase activities.
 1935Involved in NS3 ATPase and RTPase activities.
 2505mRNA cap binding.
 2508mRNA cap binding; via carbonyl oxygen.
 2509mRNA cap binding.
 2511mRNA cap binding; via carbonyl oxygen.
 2516mRNA cap binding.
 2520mRNA cap binding.
 2552Essential for 2'-O-methyltransferase activity.
 2637Essential for 2'-O-methyltransferase and N-7 methyltransferase activity.
 2641mRNA cap binding.
 2672Essential for 2'-O-methyltransferase activity.
 2703mRNA cap binding.
 2705mRNA cap binding.
 2708Essential for 2'-O-methyltransferase activity.
 102-122Helical.
 243-260Helical.
 262-280Helical.
 728-748Helical.
 753-773Helical.
 1196-1220Helical.
 1227-1245Helical.
 1270-1290Helical.
 1292-1310Helical.
 1318-1338Helical.
 1347-1367Helical.
 1371-1391Helical.
 1448-1468Helical.
 2148-2168Helical.
 2171-2191Helical.
 2193-2213Helical.
 2229-2249Helical; Note=Signal for NS4B.
 2275-2295Helical.
 2317-2337Helical.
 2348-2368Helical.
 2414-2434Helical.
 2460-2480Helical.
 1668-1675ATP.
 100-101Cleavage; by viral protease NS3.
 114-115Cleavage; by host signal peptidase.
 205-206Cleavage; by host furin.
 280-281Cleavage; by host signal peptidase.
 775-776Cleavage; by host signal peptidase.
 1127-1128Cleavage; by host.
 1345-1346Cleavage; by viral protease NS3.
 1475-1476Cleavage; by autolysis.
 2093-2094Cleavage; by autolysis.
 2220-2221Cleavage; by viral protease NS3.
 2243-2244Cleavage; by host signal peptidase.
 2491-2492Cleavage; by viral protease NS3.
 283-310
 340-401
 354-385
 372-396
 465-565
 582-613
 779-790
 830-918
 954-998
 1055-1104
 1066-1088
 1087-1091
 6-112Flavivirus capsid protein C
IPR001122PF01003
 120-204Flavivirus polyprotein propeptide
IPR002535PF01570
 207-279Envelope glycoprotein M, flavivirus
IPR000069PF01004
 282-576Flavivirus glycoprotein central and dim erisation domain
IPR011998PF00869
 578-673Flavivirus glycoprotein E, immunoglobuli n-like domain
IPR027287PF02832
 777-1129Flavivirus non-structural protein NS1
IPR001157PF00948
 1138-1312Flavivirus non-structural protein NS2A
IPR000752PF01005
 1349-1475Flavivirus non-structural protein NS2B
IPR000487PF01002
 1492-1643Flavivirus NS3, petidase S7
IPR001850PF00949
 1658-1805DEAD box, Flavivirus
IPR011492PF07652
 2099-2240Flavivirus non-structural protein NS4A
IPR000404PF01350
 2244-2484Flavivirus non-structural protein NS4B
IPR001528PF01349
 2546-2713Ribosomal RNA methyltransferase FtsJ dom ain
IPR002877PF01728
 2742-3383RNA-directed RNA polymerase, flavivirus
IPR000208PF00972

Sequence Alignments

Experimental structures

DescriptionOligo-stateLigandsStructureRangeDownload
3H5 Fab bound to EDIII of DenV 2 Xtal form 1 Heteromer
P14340;
GOL;CL;6fla579-677
Neutralization of dengue virus by a serotype cross-reactive antibody elucidated by cryoelectron m... Heteromer
2r29578-674
Crystal structure of Dengue-2 virus methyltransferase complexed with S-adenosyl-L-homocysteinemonomer SAH;SO4;3evg2499-2757

Homology models

Oligo-stateLigandsQMEANTemplateRangeSeq id (%)ReportDownload
monomer MN;ADP;-0.052whx.1.A1496-2093
76.54
monomer -0.415yvu.1.A1478-2093
76.79
monomer ZN;-1.825ccv.5.A2498-3373
78.81
monomer ZN;SAH;-2.025tfr.1.A2498-3375
65.66