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P35439 (NMDZ1_RAT) Rattus norvegicus (Rat)

Glutamate receptor ionotropic, NMDA 1 UniProtKBInterProSTRINGInteractive Modelling

938 aa; Sequence (Fasta) ; (Isoform 2; Isoform 3; Isoform 4; Isoform 5; Isoform 6; Isoform 7); 1 identical sequence: Rattus norvegicus: A6JT38

Available Structures

86 Experimental Structures

DescriptionPDB IDOligo-stateRangeLigands
GluN1b-GluN2B NMDA receptor in non-active-1 conformation Heteromer
Q00960;
25-843
Assess
GluN1b-GluN2B NMDA receptor structure-Class Y Heteromer
Q00960;
25-843
Assess
GluN1b-GluN2B NMDA receptor structure-Class X Heteromer
Q00960;
25-843
Assess
GluN1b-GluN2B NMDA receptor in active conformation at 4.4 angstrom resolution Heteromer
Q00960;
25-841
NAG;NAG;
Assess
GluN1b-GluN2B NMDA receptor in non-active 1 conformation at 3.95 angstrom resolution Heteromer
Q00960;
25-841
NAG;NAG;
Assess
Memantine-bound GluN1a-GluN2B NMDA receptors Heteromer
Q00960;
25-841
NAG;NAG;377;
Assess
GluN1b-GluN2B NMDA receptor in complex with GluN1 antagonist L689,560, class 1 Heteromer
Q00960;
25-841
NAG;QGM;NAG;
Assess
Glycine and glutamate bound GluN1a-GluN2B NMDA receptors in non-active 1 conformation at 2.97 Angst… Heteromer
Q00960;
25-841
NAG;NAG;GLY;GLU;
Assess
GluN1b-GluN2B NMDA receptor in complex with GluN2B antagonist SDZ 220-040, class 1 Heteromer
Q00960;
25-841
QGP;NAG;
Assess
GluN1b-GluN2B NMDA receptor in complex with GluN2B antagonist SDZ 220-040, class 2 Heteromer
Q00960;
25-841
NAG;QGP;
Assess
GluN1b-GluN2B NMDA receptor in complex with SDZ 220-040 and L689,560, class 1 Heteromer
Q00960;
25-841
NAG;QGM;NAG;QGP;
Assess
GluN1b-GluN2B NMDA receptor in active conformation stabilized by inter-GluN1b-GluN2B subunit cross-… Heteromer
Q00960;
25-841
NAG;NAG;
Assess
GluN1b-GluN2B NMDA receptor in complex with SDZ 220-040 and L689,560, class 2 Heteromer
Q00960;
25-841
NAG;NAG;QGP;QGM;
Assess
Phencyclidine-bound GluN1a-GluN2B NMDA receptors Heteromer
Q00960;
25-841
NAG;NAG;1PC;
Assess
S-(+)-ketamine bound GluN1a-GluN2B NMDA receptors at 3.69 Angstrom resolution Heteromer
Q00960;
25-841
NAG;NAG;GLY;GLU;JC9;
Assess
GluN1b-GluN2B NMDA receptor in complex with GluN1 antagonist L689,560, class 2 Heteromer
Q00960;
25-841
NAG;QGM;NAG;
Assess
GluN1b-GluN2B NMDA receptor in non-active 2 conformation at 4 angstrom resolution Heteromer
Q00960;
27-841
NAG; 10×NAG;
Assess
Cryo-EM structure of GluN1b-2B NMDAR in complex with Fab5 in non-active2-like conformation Heteromer
Q00960;
25-838
Assess
Diheteromeric NMDA receptor GluN1/GluN2A in the 'Extended-2' conformation, in complex with glycine … Heteromer
Q00959;
25-838
34×NAG;
Assess
Cryo-EM structure of GluN1b-2B NMDAR complexed to Fab2 class1 Heteromer
Q00960;
25-838
Assess
Diheteromeric NMDA receptor GluN1/GluN2A in the '1-Knuckle' conformation, in complex with glycine a… Heteromer
Q00959;
25-838
34×NAG;
Assess
Triheteromeric NMDA receptor GluN1/GluN2A/GluN2A* in the '1-Knuckle' conformation, in complex with … Heteromer
Q00959;
25-838
NAG; 29×NAG;
Assess
Cryo-EM structure of GluN1b-2B NMDAR in complex with Fab5 in Non-active1 conformation Heteromer
Q00960;
25-838
Assess
Diheteromeric NMDA receptor GluN1/GluN2A in the '2-Knuckle-Symmetric' conformation, in complex with… Heteromer
Q00959;
25-838
NAG; 28×NAG;
Assess
Diheteromeric NMDA receptor GluN1/GluN2A in the '2-Knuckle-Symmetric' conformation, in complex with… Heteromer
Q00959;
25-838
34×NAG;
Assess
Cryo-EM structure of GluN1b-2B NMDAR in complex with Fab5 active conformation Heteromer
Q00960;
25-838
Assess
Diheteromeric NMDA receptor GluN1/GluN2A in the '2-Knuckle-Symmetric' conformation, in complex with… Heteromer
Q00959;
25-838
12×NAG; 22×NAG;
Assess
Diheteromeric NMDA receptor GluN1/GluN2A in the '2-Knuckle-Symmetric' conformation, in complex with… Heteromer
Q00959;
25-838
NAG; 26×NAG;
Assess
Diheteromeric NMDA receptor GluN1/GluN2A in the '2-Knuckle-Asymmetric' conformation, in complex wit… Heteromer
Q00959;
25-838
NAG; 30×NAG;
Assess
Diheteromeric NMDA receptor GluN1/GluN2A in the 'Extended' conformation, in complex with glycine an… Heteromer
Q00959;
25-838
34×NAG;
Assess
Diheteromeric NMDA receptor GluN1/GluN2A in the 'Super-Splayed' conformation, in complex with glyci… Heteromer
Q00959;
25-838
34×NAG;
Assess
Diheteromeric NMDA receptor GluN1/GluN2A in the '1-Knuckle' conformation, in complex with glycine a… Heteromer
Q00959;
25-838
NAG; 28×NAG;
Assess
Diheteromeric NMDA receptor GluN1/GluN2A in the 'Extended-1' conformation, in complex with glycine … Heteromer
Q00959;
25-838
NAG; 28×NAG;
Assess
Cryo-EM structure of GluN1b-2B NMDAR complexed to Fab2 Non-active2-like Heteromer
Q00960;
25-838
Assess
Diheteromeric NMDA receptor GluN1/GluN2A in the 'Splayed-Open' conformation, in complex with glycin… Heteromer
Q00959;
25-838
13×NAG; 21×NAG;
Assess
Diheteromeric NMDA receptor GluN1/GluN2A in the 'Super-Splayed' conformation, in complex with glyci… Heteromer
Q00959;
25-838
34×NAG;
Assess
Triheteromeric NMDA receptor GluN1/GluN2A/GluN2A* in the '2-Knuckle-Asymmetric' conformation, in co… Heteromer
Q00959;
25-838
NAG; 28×NAG;
Assess
Triheteromeric NMDA receptor GluN1/GluN2A/GluN2A* in the '2-Knuckle-Symmetric' conformation, in com… Heteromer
Q00959;
25-838
NAG; 30×NAG;
Assess
Triheteromeric NMDA receptor GluN1/GluN2A/GluN2A* in the 'Extended' conformation, in complex with g… Heteromer
Q00959;
25-838
NAG; 25×NAG;
Assess
Triheteromeric NMDA receptor GluN1/GluN2A/GluN2A* in the '2-Knuckle-Symmetric' conformation, in com… Heteromer
Q00959;
25-838
NAG; 29×NAG;
Assess
Cryo-EM structure of GluN1b-2B NMDAR in complex with Fab5 non-active2 conformation Heteromer
Q00960;
25-838
Assess
GluN1-GluN2B NMDA receptors with exon 5 Heteromer
Q00960;
25-838
NAG; 10×NAG;
Assess
GluN1b-GluN2B NMDA receptor structure in non-active-2 conformation Heteromer
Q00960;
25-838
Assess
Cryo-EM structure of GluN1b-2B NMDAR complexed to Fab2 non-active1-like Heteromer
Q00960;
27-838
Assess
Crystal Structure of GluN1a/GluN2B NMDA Receptor Ion Channel Heteromer
Q00960;
25-833
NAG;NAG;NAG; 84×W;GLY;NAG;QEL;GLU;
Assess
Structure of the Rat tri-heteromeric GluN1-GluN2A-GluN2C NMDA receptor in complex with glycine and … Heteromer
G3V9C5; Q00961;
25-798
NAG;NAG; 21×NAG;GLY;GLU;
Assess
GLUN1B-GLUN2B NMDA RECEPTOR IN ACTIVE CONFORMATION Heteromer
Q00960;
25-798
Assess
Triheteromeric NMDA receptor GluN1/GluN2A/GluN2A* Extracellular Domain in the '2-Knuckle-Asymmetric… Heteromer
Q00959;
25-797
NAG; 26×NAG;
Assess
Structure of the Rat GluN1-GluN2C NMDA receptor in complex with glycine, glutamate and (R)-PYD-106 Heteromer
Q00961;
25-796
NAG; 12×NAG; 13×NAG;GLY;GLU;IWB;
Assess
Structure of the Rat GluN1-GluN2C NMDA receptor in complex with glycine and glutamate (minor class … Heteromer
Q00961;
25-796
NAG;NAG; 12×NAG;
Assess
Structure of the Rat GluN1-GluN2C NMDA receptor in complex with glycine and glutamate (major class … Heteromer
Q00961;
25-796
16×NAG;NAG; 13×NAG;GLY;GLU;
Assess
CRYSTAL STRUCTURE OF GLUN1/GLUN2A LIGAND-BINDING DOMAIN IN COMPLEX WITH GLYCINE AND NVP-AAM077 Heteromer
Q00959;
394-799
GLY;GOL;84J;
Assess
Crystal structure of GLUN1/GLUN2A ligand-binding domain in complex with glycine and homoquinolinic … Heteromer
Q00959;
395-798
GLY;GOL;QM1;
Assess
Agonist-bound GluN1/GluN2A agonist binding domains with TCN201 Heteromer
Q00959;
396-799
GLY;GLU;67P;
Assess
Crystal structure of GLUN1/GLUN2A-4M mutant ligand-binding domain in complex with glycine and gluta… Heteromer
Q00959;
395-797
GLY;GLU;
Assess
Crystal structure of GluN1/GluN2A ligand-binding domain in complex with glycine and glutamate in PE… Heteromer
Q00959;
395-797
GLY;GLU;
Assess
Crystal structure of GLUN1/GLUN2A-4M mutant ligand-binding domain in complex with glycine and homoq… Heteromer
Q00959;
395-797
GLY;QM1;
Assess
Crystal structure of GluN1/GluN2A ligand-binding domain in complex with glycine and PPDA Heteromer
Q00959;
396-798
GLY;2JL;
Assess
Crystal structure of GLUN1/GLUN2A-4M mutant ligand-binding domain in complex with glycine and UBP791 Heteromer
Q00959;
396-798
GOL;GLY;QM4;
Assess
Glutamate- and glycine-bound GluN1/GluN2A agonist binding domains Heteromer
Q00959;
395-795
GLY;GLU;
Assess
Crystal structure of GluN1/GluN2A NMDA receptor agonist binding domains with glycine and antagonist… Heteromer
Q00959;
396-796
GLY;N9D;
Assess
Crystal structure of GLUN1/GLUN2A ligand-binding domain in complex with glycine and UBP791 Heteromer
Q00959;
396-796
GLY;QM4;
Assess
Crystal structure of GluN1/GluN2A ligand-binding domain in complex with glycine and SDZ 220-040 Heteromer
Q00959;
395-795
GLY;QGP;GOL;
Assess
Crystal structure of GluN1/GluN2A ligand-binding domain in complex with DCKA and glutamate Heteromer
Q00959;
396-795
2JK;GLU;
Assess
Crystal Structure Of The NR1/NR2A ligand-binding cores complex Heteromer
Q00959;
396-795
GLY;GLU;
Assess
Crystal structure of GluN1/GluN2A ligand-binding domain in complex with glycine and D-AP5 Heteromer
Q00959;
396-794
GLY;GOL;2JJ;
Assess
Crystal structure of GluN1/GluN2A ligand-binding domain in complex with L689,560 and glutamate Heteromer
Q00959;
397-795
QGM;GLU;
Assess
Crystal structure of GluN1/GluN2A NMDA receptor agonist binding domains with glycine and antagonist… Heteromer
Q00959;
396-794
GLY;N9A;
Assess
Crystal structure of GluN1/GluN2A NMDA receptor agonist binding domains with glycine and antagonist… Heteromer
Q00959;
397-795
GLY;5DX;
Assess
GLUTAMATE- AND GLYCINE-BOUND GLUN1/GLUN2A AGONIST BINDING DOMAINS WITH MPX-004 Heteromer
Q00959;
395-793
GLY;GLU;67R;
Assess
Glutamate- and DCKA-bound GluN1/GluN2A agonist binding domains with MPX-007 Heteromer
Q00959;
396-794
2JK;6ND;GLU;
Assess
Crystal structure of GluN1/GluN2A NMDA receptor agonist binding domains with glycine and antagonist… Heteromer
Q00959;
397-794
GLY;5DY;PEG;TRS;
Assess
Glutamate- and glycine-bound GluN1/GluN2A agonist binding domains with MPX 007 Heteromer
Q00959;
396-793
GLY;GLU;67Q;
Assess
Crystal structure of GluN1/GluN2A NMDA receptor agonist binding domains with glycine and antagonist… Heteromer
Q00959;
397-794
GLY;5DZ;PEG;
Assess
Crystal structure of GluN1/GluN2A NMDA receptor agonist binding domains with glycine and antagonist… Heteromer
Q00959;
397-794
GLY;5E0;
Assess
Crystal Structure of Ca2+/Calmodulin bound to NMDA Receptor NR1C1 peptide Heteromer
P0DP29;
875-896
CA;
Assess
Crystal Structure of the NMDA Receptor GluN1 Ligand Binding Domain Apo Statehomo-2-mer395-798
PO4;
Assess
Crystal structure of the GluN1 N-terminal domain (NTD)homo-2-mer24-393
10×NAG;CL;
Assess
CRYSTAL STRUCTURE OF THE NR1 LIGAND BINDING CORE IN COMPLEX WITH GLYCINE AT 1.35 ANGSTROMS RESOLUTI…monomer396-800
GLY;
Assess
CRYSTAL STRUCTURE OF THE NR1 LIGAND BINDING CORE IN COMPLEX WITH D-SERINE AT 1.45 ANGSTROMS RESOLUT…monomer396-800
DSN;
Assess
CRYSTAL STRUCTURE OF THE NR1 LIGAND BINDING CORE IN COMPLEX WITH D-CYCLOSERINE AT 1.60 ANGSTROMS RE…monomer396-800
4AX;
Assess
Crystal structure of the NMDA receptor GluN1 ligand binding domain in complex with 1-thioxo-1,2-dih…monomer396-800
KFQ;GOL;SO4;
Assess
Crystal structure of the NR1 ligand-binding core in complex with ACPCmonomer397-799
1AC;
Assess
Crystal structure of the NR1 ligand binding core in complex with ACBCmonomer397-799
192;
Assess
CRYSTAL STRUCTURE OF THE NR1 LIGAND BINDING CORE IN COMPLEX WITH 5,7-DICHLOROKYNURENIC ACID (DCKA) …monomer397-798
DK1;
Assess
Crystal structure of the NR1 ligand binding core in complex with cycloleucinemonomer397-793
AC5;
Assess

6 SWISS-MODEL models

TemplateOligo-stateQMEANDisCoRangeLigandsTrg-Tpl Seq id (%)
6whs.1.Amonomer0.7125-841
98.72
Assess
1y1z.1.Amonomer0.59631-799
87.06
Assess
4u2p.1.Dmonomer0.53154-837
30.89
Assess
4u1w.1.Dmonomer0.53154-837
30.89
Assess
4u2p.1.Bmonomer0.52154-837
30.89
Assess
4u2p.1.Amonomer0.52154-832
30.89
Assess

10 SWISS-MODEL models built on isoform sequence

TemplateIsoformOligo-stateQMEANDisCoRangeLigandsTrg-Tpl Seq id (%)
Isoform 26whs.1.Amonomer0.6825-862
98.75
Assess
Isoform 21y1z.1.Amonomer0.58652-820
87.06
Assess
Isoform 46whs.1.Amonomer0.7025-841
98.67
Assess
Isoform 41y1z.1.Amonomer0.60631-799
87.06
Assess
Isoform 45kbs.1.Bmonomer0.54154-838
30.99
Assess
Isoform 45kbs.1.Amonomer0.53154-841
30.99
Assess
Isoform 56whs.1.Amonomer0.7025-841
98.61
Assess
Isoform 55kbs.1.Bmonomer0.54154-838
30.99
Assess
Isoform 55jty.1.Amonomer0.54396-794
2JK;95.16
Assess
Isoform 55kbs.1.Amonomer0.53154-841
30.99
Assess