P38203 (LSM2_YEAST) Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)

U6 snRNA-associated Sm-like protein LSm2 UniProtKBAFDB90v4InterProSTRINGInteractive Modelling

95 aa; Sequence (Fasta) ; 9 identical sequences: Saccharomyces cerevisiae: N1P9R1, C8Z3X0, A6ZKS2, B3LNG3; Saccharomyces paradoxus: A0A8B8ULE0; Saccharomyces boulardii: A0A0L8VW02; Saccharomyces uvarum: A0AA35JAF7; Saccharomyces mikatae IFO 1815: A0AA35NF12; Saccharomyces eubayanus: A0A0L8RMY4

Available Structures

15 Experimental Structures

DescriptionPDB IDOligo-stateRangeLigands
Structure of yeast U6 snRNP with 3'-phosphate terminated U6 RNA
6aso
 Heteromer
A6ZYX7; P40070; P40089; P47093; P49960; P53905; P57743; 		1-95
2×K; 1×MN; 2×MG;
Assess
Structure of yeast U6 snRNP with 2'-phosphate terminated U6 RNA
5vsu
 Heteromer
P40070; P40089; P47093; P49960; P53905; P57743; Q06406; 		1-95
Assess
Crystal structure of the yeast Lsm1-7 complex
4c92
 Heteromer
P40070; P40089; P47017; P53905; P57743; Q06406; 		2-95
Assess
Crystal structure of Lsm2-3-Pat1C complex from Saccharomyces cerevisiae
4n0a
 Heteromer
P25644; P57743; 		1-93
Assess
Crystal structure of the yeast Lsm1-7-Pat1 complex
4c8q
 Heteromer
P25644; P40070; P40089; P47017; P53905; P57743; Q06406; 		2-94
2×CO;
Assess
Crystal structure of Lsm2-8 complex bound to the RNA fragment CGUUU
4m7d
 Heteromer
P40070; P40089; P47093; P53905; P57743; Q06406; 		1-92
Assess
Cryo-EM structure of the spliceosomal U4/U6.U5 tri-snRNP
3jcm
 Heteromer
P19735; P20053; P32639; P33334; P36048; P39990; P40018; P40070; P40089; P40204; P43321; P47093; P49704; P53905; P54999; P57743; Q02260; Q03338; Q06217; Q06406; Q06819; Q12330; 		1-92
1×GTP; 1×M7M;
Assess
Cryo-EM structure of the yeast pre-B complex at an average resolution of 3.4~4.6 angstrom (tri-snRN…
5zwm
 Heteromer
P0C074; P19735; P19736; P20053; P32524; P32639; P33334; P36048; P39990; P40018; P40070; P40089; P40204; P40565; P40567; P43321; P46947; P47093; P49704; P49955; P53905; P54999; P57743; Q02260; Q02554; Q03338; Q04693; Q06217; Q06406; Q06819; Q06835; Q07350; Q07930; Q08963; Q12330; Q12420; Q99181; 		1-92
1×GTP; 1×MG; 6×ZN;
Assess
Cryo-EM structure of the yeast B complex at average resolution of 3.9 angstrom
5zwo
 Heteromer
P0C074; P19735; P19736; P20053; P32524; P32639; P33334; P36048; P38282; P39990; P40018; P40070; P40089; P40204; P40565; P40567; P43321; P46947; P47093; P49704; P49955; P53905; P54999; P57743; Q00723; Q02260; Q02554; Q03338; Q04693; Q06217; Q06406; Q06819; Q06835; Q07350; Q07930; Q08963; Q12330; Q12368; Q12420; Q99181; 		1-92
1×GTP; 1×MG;
Assess
Crystal structure of Lsm2-8 complex bound to the 3' end sequence of U6 snRNA
4m7a
 Heteromer
P40070; P40089; P47093; P53905; P57743; Q06406; 		1-91
Assess
Crystal structure of Lsm2-8 complex, space group P21
4m78
 Heteromer
P40070; P40089; P47093; P53905; P57743; Q06406; 		1-91
Assess
Crystal structure of Lsm1-7 complex
4m75
 Heteromer
P40070; P40089; P47017; P53905; P57743; Q06406; 		1-91
2×CL;
Assess
Crystal structure of Lsm2-8 complex, space group I212121
4m77
 Heteromer
P40070; P40089; P47093; P53905; P57743; Q06406; 		1-91
Assess
Structure of a pre-catalytic spliceosome.
5nrl
 Heteromer
A6ZYX7; P0C074; P19735; P19736; P20053; P32524; P32639; P33334; P36048; P38282; P39990; P40018; P40070; P40089; P40204; P40567; P43321; P47093; P49704; P49955; P53905; P54999; P57743; Q00723; Q02260; Q02554; Q03338; Q04693; Q06217; Q06819; Q06835; Q07350; Q08963; Q12330; Q12368; Q12420; Q99181; 		1-90
1×GTP; 7×ZN;
Assess
The overall structure of the yeast spliceosomal U4/U6.U5 tri-snRNP at 3.7 Angstrom
5gan
 Heteromer
P19735; P20053; P32639; P33334; P36048; P39990; P40018; P40070; P40089; P40204; P43321; P47093; P49704; P53905; P54999; P57743; Q02260; Q03338; Q06217; Q06406; Q06819; Q12330; Q12420; 		1-90
1×GTP;
Assess

1 SWISS-MODEL model

TemplateOligo-stateQMEANDisCoRangeLigandsTrg-Tpl Seq id (%)
5vsu.1.Bmonomer0.831-95
100.00
Assess