P49711 (CTCF_HUMAN) Homo sapiens (Human)

Transcriptional repressor CTCF UniProtKBInterProSTRINGInteractive Modelling

727 aa; Sequence (Fasta) ; (Isoform 2; ) Identical sequences: Pongo abelii: H2NR83; A0A6D2WUX6; Pan troglodytes: H2QBB9; A0A6D2W785; Pan paniscus: A0A2R9CRW2; Gorilla gorilla gorilla: G3QFH5

Sequence Features

 278R -> C (found in an endometrial carcinoma sample; no effect on its nuclear localization; loss of its ability to inhibit cell proliferation; unknown pathological significance; dbSNP:rs1266478000) VAR_079375 dbSNP
 339R -> W (in a Wilms' tumor; dbSNP:rs1243010179) VAR_013141 dbSNP
 342R -> H (found in an endometrial carcinoma sample; no effect on its nuclear localization; loss of its ability to inhibit cell proliferation; unknown pathological significance) VAR_079376
 344K -> E (in a breast tumor; dbSNP:rs1215280530) VAR_013142 dbSNP
 345H -> R (in a prostate tumor) VAR_013143
 365K -> T (found in an endometrial carcinoma sample; no effect on its nuclear localization; no loss of its ability to inhibit cell proliferation; unknown pathological significance) VAR_079377
 448R -> Q (in a Wilms' tumor) VAR_013144
 567R -> W (in MRD21; dbSNP:rs879255516) VAR_070776 dbSNP
 266-288C2H2-type 1
 294-316C2H2-type 2
 322-345C2H2-type 3
 351-373C2H2-type 4
 379-401C2H2-type 5
 407-430C2H2-type 6
 437-460C2H2-type 7
 467-489C2H2-type 8
 495-517C2H2-type 9
 523-546C2H2-type 10
 555-577C2H2-type 11; atypical
 19-727Missing (found in an endometrial carcinoma sample; unknown pathological significance) VAR_079374
 266-288Zinc finger C2H2-type
IPR013087PF00096
 294-316Zinc finger C2H2-type
IPR013087PF00096
 322-345Zinc finger C2H2-type
IPR013087PF00096
 379-401Zinc finger C2H2-type
IPR013087PF00096
 437-460Zinc finger C2H2-type
IPR013087PF00096
 555-573Zinc finger C2H2-type
IPR013087PF00096

Sequence Alignments

Experimental structures

DescriptionOligo-stateLigandsStructureRangeDownloadAssess
Homo sapiens CCCTC-binding factor (CTCF) ZnF6-8 and H19 sequence DNA complex structure Heteromer
ZN;5k5l408-492
Structure of the SA2/SCC1/CTCF complex Heteromer
O60216; Q8N3U4;
6qnx223-231
Crystal structure of CTCF ZFs6-11-gb7CSEmonomer ZN;5yel405-578
Crystal Structure of CTCF(ZnF 4-10) With 28-mer DNAmonomer ZN;EDO;5und348-518
Crystal structure of CTCF ZFs2-8-Hs5-1aEmonomer ZN;5yef321-489
CTCF ZnF2-7 and DNA complex structuremonomer ZN;5t0u294-462
Homo sapiens CCCTC-binding factor (CTCF) ZnF3-7 and DNA complex structuremonomer ZN;5kkq321-463
Human CTCF ZnF3-7 and methylated DNA complexmonomer ZN;5t00321-462
Crystal structure of CTCF ZFs4-8-eCBSmonomer ZN;5yeh349-487
Crystal structure of CTCF ZFs4-8-Hs5-1a complexmonomer ZN;5yeg350-487
Homo sapiens CCCTC-binding factor (CTCF) ZnF5-8 and DNA complex structure in space group P65monomer ZN;SO4;5k5i378-489
Homo sapiens CCCTC-binding factor (CTCF) ZnF5-8 and DNA complex structure in space group P41212monomer ZN;SO4;ACT;5k5j378-489
Homo sapiens CCCTC-binding factor (CTCF) ZnF4-7 and DNA complex structuremonomer ZN;5k5h350-460
Solution structures of the C2H2 type zinc finger domain of human Transcriptional repressor CTCFmonomer ZN;1x6h515-587
Solution Structure of the zinc finger domain of Transcriptional repressor CTCF proteinmonomer ZN;2ct1399-462

Homology models

Oligo-stateLigandsQMEANTemplateRangeSeq id (%)DownloadAssess
monomer ZN;-4.025v3m.1.C265-546
32.47
monomer ZN;-2.915v3g.1.C266-428
41.77
monomer ZN;-4.415wjq.1.C266-518
40.40
monomer ZN;-4.435yel.1.B292-455
34.76
monomer ZN;-2.735und.1.A266-402
40.61

Homology models built on isoform sequence

Isoform #Oligo-stateLigandsQMEANTemplateRangeSeq id (%)ReportDownloadAssess
2monomerZN;-2.325und.1.A20-190
100.00
2monomerZN;-2.575yel.1.B77-250
99.43
2monomer-3.792cot.1.A11-75
32.81
2monomerZN;-1.842rsi.1.A165-252
33.73